View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8251_low_42 (Length: 319)

Name: NF8251_low_42
Description: NF8251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8251_low_42
NF8251_low_42
[»] chr8 (64 HSPs)
chr8 (84-301)||(24501870-24502089)
chr8 (137-301)||(42938174-42938339)
chr8 (137-301)||(2704876-2705041)
chr8 (144-301)||(26374487-26374645)
chr8 (137-301)||(23115226-23115390)
chr8 (137-280)||(32711359-32711504)
chr8 (137-301)||(42937337-42937500)
chr8 (137-301)||(42735334-42735499)
chr8 (137-301)||(5576677-5576843)
chr8 (137-291)||(43959642-43959796)
chr8 (137-280)||(41479081-41479226)
chr8 (144-301)||(7506956-7507114)
chr8 (137-301)||(10392294-10392459)
chr8 (137-301)||(39467525-39467690)
chr8 (89-301)||(43166747-43166961)
chr8 (137-301)||(14782192-14782357)
chr8 (137-301)||(44725867-44726032)
chr8 (83-168)||(23115401-23115487)
chr8 (84-168)||(2705052-2705137)
chr8 (137-301)||(9288514-9288679)
chr8 (137-301)||(18958784-18958949)
chr8 (137-301)||(19717938-19718103)
chr8 (84-168)||(42735510-42735595)
chr8 (81-168)||(5576854-5576942)
chr8 (81-168)||(7507132-7507220)
chr8 (188-301)||(26856104-26856216)
chr8 (137-291)||(16362180-16362335)
chr8 (86-160)||(42937250-42937325)
chr8 (188-291)||(10295448-10295550)
chr8 (84-168)||(26374661-26374746)
chr8 (88-168)||(41478989-41479070)
chr8 (137-272)||(4031343-4031480)
chr8 (137-272)||(18306046-18306183)
chr8 (137-272)||(31623679-31623816)
chr8 (232-302)||(4403188-4403257)
chr8 (84-168)||(26373692-26373778)
chr8 (137-272)||(7466319-7466456)
chr8 (85-168)||(24214824-24214908)
chr8 (137-272)||(32497509-32497646)
chr8 (79-135)||(41069798-41069854)
chr8 (88-168)||(43959549-43959631)
chr8 (85-168)||(32711515-32711599)
chr8 (137-268)||(42305874-42306007)
chr8 (86-168)||(42938350-42938433)
chr8 (83-163)||(8543406-8543488)
chr8 (89-162)||(32497376-32497450)
chr8 (83-162)||(7466222-7466302)
chr8 (232-272)||(39189899-39189939)
chr8 (232-279)||(13478328-13478375)
chr8 (84-162)||(14782374-14782453)
chr8 (84-162)||(44726049-44726128)
chr8 (232-302)||(8410454-8410523)
chr8 (89-162)||(10295620-10295694)
chr8 (79-164)||(29260281-29260367)
chr8 (83-162)||(31623582-31623662)
chr8 (223-291)||(37857191-37857258)
chr8 (84-162)||(4031497-4031576)
chr8 (84-162)||(42306024-42306103)
chr8 (89-169)||(9771049-9771128)
chr8 (81-162)||(16362081-16362163)
chr8 (81-162)||(18306200-18306282)
chr8 (232-301)||(4950073-4950141)
chr8 (85-160)||(35142041-35142117)
chr8 (91-162)||(39467706-39467778)
[»] scaffold0113 (1 HSPs)
scaffold0113 (83-301)||(38953-39173)
[»] chr5 (41 HSPs)
chr5 (79-301)||(7016796-7017020)
chr5 (137-301)||(21147051-21147216)
chr5 (137-301)||(139257-139422)
chr5 (137-301)||(5272976-5273141)
chr5 (137-301)||(33656098-33656265)
chr5 (137-301)||(32157954-32158120)
chr5 (137-301)||(6460776-6460941)
chr5 (137-301)||(27459007-27459171)
chr5 (186-301)||(849182-849296)
chr5 (137-301)||(1152160-1152325)
chr5 (86-168)||(33656276-33656359)
chr5 (137-301)||(4550314-4550479)
chr5 (137-291)||(4240519-4240674)
chr5 (137-298)||(22746281-22746443)
chr5 (137-301)||(13925915-13926080)
chr5 (137-301)||(14000162-14000327)
chr5 (188-301)||(7947630-7947742)
chr5 (88-168)||(5273194-5273276)
chr5 (87-215)||(16894044-16894174)
chr5 (223-301)||(39852417-39852494)
chr5 (187-301)||(14465284-14465397)
chr5 (84-168)||(21146955-21147040)
chr5 (140-291)||(1461205-1461357)
chr5 (137-272)||(37013898-37014035)
chr5 (84-162)||(43319134-43319214)
chr5 (86-168)||(6460682-6460765)
chr5 (137-268)||(40013791-40013924)
chr5 (232-291)||(5949189-5949247)
chr5 (83-168)||(32158132-32158218)
chr5 (190-268)||(9220796-9220874)
chr5 (184-289)||(9689691-9689794)
chr5 (79-162)||(14000344-14000429)
chr5 (84-162)||(4550496-4550575)
chr5 (86-168)||(27459182-27459265)
chr5 (137-175)||(5273145-5273183)
chr5 (72-164)||(28594447-28594541)
chr5 (88-168)||(9689553-9689633)
chr5 (137-175)||(5949093-5949131)
chr5 (86-155)||(27786210-27786280)
chr5 (89-162)||(37013807-37013881)
chr5 (111-162)||(13925846-13925898)
[»] chr4 (102 HSPs)
chr4 (86-302)||(25445983-25446199)
chr4 (137-301)||(25331114-25331279)
chr4 (137-301)||(7007357-7007522)
chr4 (137-301)||(28541681-28541846)
chr4 (137-301)||(32950894-32951059)
chr4 (137-301)||(55302826-55302991)
chr4 (137-301)||(1044792-1044955)
chr4 (137-301)||(41881140-41881306)
chr4 (137-301)||(37046509-37046675)
chr4 (137-301)||(12112928-12113093)
chr4 (137-301)||(25504697-25504862)
chr4 (137-300)||(1112876-1113040)
chr4 (137-301)||(19740966-19741131)
chr4 (137-301)||(22201998-22202163)
chr4 (84-291)||(23987143-23987352)
chr4 (137-301)||(39479413-39479580)
chr4 (137-301)||(23464938-23465103)
chr4 (137-301)||(30009735-30009900)
chr4 (145-301)||(34228641-34228798)
chr4 (137-280)||(31314810-31314951)
chr4 (186-301)||(42786718-42786832)
chr4 (137-278)||(46635722-46635865)
chr4 (137-301)||(53275822-53275987)
chr4 (223-301)||(7249823-7249900)
chr4 (195-298)||(41320853-41320955)
chr4 (137-301)||(5441387-5441552)
chr4 (137-301)||(9163059-9163224)
chr4 (137-301)||(27768039-27768204)
chr4 (190-301)||(3436631-3436741)
chr4 (79-168)||(22201897-22201987)
chr4 (137-301)||(24131040-24131195)
chr4 (84-168)||(1044697-1044782)
chr4 (137-301)||(37915810-37915975)
chr4 (137-301)||(54341127-54341292)
chr4 (137-291)||(51320904-51321059)
chr4 (84-168)||(41881317-41881403)
chr4 (137-301)||(32322074-32322239)
chr4 (137-301)||(37828460-37828625)
chr4 (80-167)||(42786650-42786739)
chr4 (137-301)||(54853526-54853691)
chr4 (137-272)||(49834899-49835036)
chr4 (86-168)||(24131206-24131289)
chr4 (137-291)||(40537218-40537368)
chr4 (88-162)||(31314968-31315043)
chr4 (83-168)||(25331017-25331103)
chr4 (188-291)||(29649735-29649837)
chr4 (83-168)||(39479591-39479677)
chr4 (223-301)||(48261198-48261275)
chr4 (113-272)||(32684074-32684235)
chr4 (89-169)||(24736336-24736416)
chr4 (137-272)||(30967385-30967522)
chr4 (87-168)||(46635876-46635959)
chr4 (86-168)||(7250007-7250090)
chr4 (188-272)||(28483935-28484019)
chr4 (86-168)||(28541587-28541670)
chr4 (86-168)||(37046686-37046769)
chr4 (79-168)||(30009911-30010001)
chr4 (89-162)||(30967539-30967613)
chr4 (83-168)||(40537379-40537465)
chr4 (232-301)||(44770911-44770979)
chr4 (87-168)||(1112784-1112865)
chr4 (113-291)||(36479299-36479478)
chr4 (226-301)||(27454136-27454210)
chr4 (80-169)||(27767938-27768029)
chr4 (84-162)||(37915672-37915751)
chr4 (188-272)||(49501597-49501681)
chr4 (188-272)||(49507662-49507746)
chr4 (84-169)||(20021231-20021317)
chr4 (95-168)||(32951070-32951144)
chr4 (107-168)||(34228816-34228878)
chr4 (78-140)||(41320631-41320693)
chr4 (79-162)||(5441285-5441370)
chr4 (223-272)||(5800049-5800098)
chr4 (232-272)||(12913304-12913344)
chr4 (84-168)||(23464840-23464927)
chr4 (223-267)||(41725196-41725240)
chr4 (83-162)||(54341030-54341110)
chr4 (232-272)||(56445431-56445471)
chr4 (86-168)||(7007262-7007345)
chr4 (243-302)||(20021424-20021482)
chr4 (86-168)||(25504873-25504955)
chr4 (86-168)||(55302732-55302815)
chr4 (137-175)||(7249957-7249995)
chr4 (141-175)||(41320735-41320769)
chr4 (232-301)||(28371004-28371072)
chr4 (137-301)||(39307311-39307476)
chr4 (223-272)||(50018322-50018371)
chr4 (84-162)||(44646719-44646798)
chr4 (90-160)||(49835055-49835126)
chr4 (84-162)||(54853708-54853787)
chr4 (108-169)||(11090302-11090364)
chr4 (107-168)||(12913133-12913195)
chr4 (137-175)||(20021327-20021365)
chr4 (79-160)||(28847111-28847193)
chr4 (137-175)||(44771039-44771077)
chr4 (78-162)||(28483864-28483949)
chr4 (112-164)||(36728050-36728103)
chr4 (113-169)||(41725041-41725098)
chr4 (102-162)||(5799883-5799943)
chr4 (84-162)||(28100589-28100669)
chr4 (83-162)||(29649907-29649987)
chr4 (88-140)||(53275727-53275779)
[»] scaffold0004 (1 HSPs)
scaffold0004 (86-301)||(102026-102244)
[»] chr7 (96 HSPs)
chr7 (137-301)||(47914251-47914416)
chr7 (137-301)||(30440781-30440946)
chr7 (137-301)||(43581147-43581312)
chr7 (137-301)||(47879153-47879318)
chr7 (137-301)||(973169-973334)
chr7 (137-301)||(40996706-40996871)
chr7 (137-301)||(44343453-44343618)
chr7 (137-301)||(7719317-7719482)
chr7 (137-301)||(12893393-12893558)
chr7 (137-301)||(18914792-18914957)
chr7 (137-301)||(34695258-34695423)
chr7 (186-301)||(7718419-7718533)
chr7 (137-302)||(20275319-20275485)
chr7 (137-301)||(34008997-34009163)
chr7 (137-291)||(31638860-31639015)
chr7 (81-291)||(509577-509789)
chr7 (86-301)||(39219434-39219651)
chr7 (137-301)||(29614821-29614986)
chr7 (137-301)||(23101276-23101441)
chr7 (227-301)||(43679491-43679564)
chr7 (137-301)||(3022904-3023069)
chr7 (137-301)||(9882293-9882458)
chr7 (137-301)||(28342325-28342490)
chr7 (137-301)||(39784077-39784242)
chr7 (86-272)||(44623361-44623548)
chr7 (83-168)||(44343629-44343715)
chr7 (137-280)||(727497-727643)
chr7 (80-168)||(8078280-8078369)
chr7 (137-301)||(12963679-12963844)
chr7 (88-168)||(20275496-20275577)
chr7 (232-301)||(32142974-32143042)
chr7 (137-301)||(33382615-33382780)
chr7 (107-301)||(10676477-10676673)
chr7 (137-291)||(19251517-19251672)
chr7 (137-291)||(37327905-37328060)
chr7 (79-291)||(29585434-29585647)
chr7 (84-168)||(12893297-12893382)
chr7 (80-168)||(18914968-18915057)
chr7 (137-301)||(28034862-28035027)
chr7 (84-168)||(30440685-30440770)
chr7 (86-168)||(973074-973158)
chr7 (188-301)||(8675364-8675476)
chr7 (188-301)||(10068498-10068610)
chr7 (188-301)||(18838420-18838532)
chr7 (78-168)||(40996882-40996974)
chr7 (144-291)||(44121967-44122115)
chr7 (87-168)||(32143152-32143235)
chr7 (227-301)||(7113529-7113602)
chr7 (137-301)||(12740351-12740515)
chr7 (83-168)||(34695119-34695205)
chr7 (232-301)||(7993217-7993285)
chr7 (83-140)||(34008903-34008960)
chr7 (89-168)||(43679363-43679444)
chr7 (137-272)||(17001108-17001245)
chr7 (190-291)||(40460774-40460874)
chr7 (86-168)||(43581323-43581406)
chr7 (188-291)||(46405498-46405600)
chr7 (232-301)||(25805767-25805835)
chr7 (137-301)||(32883760-32883925)
chr7 (223-272)||(47066770-47066819)
chr7 (137-280)||(3797134-3797279)
chr7 (188-281)||(33892326-33892419)
chr7 (86-168)||(31638766-31638849)
chr7 (137-291)||(39028075-39028230)
chr7 (188-272)||(44256851-44256935)
chr7 (84-169)||(28342229-28342315)
chr7 (88-168)||(727405-727486)
chr7 (78-162)||(23101174-23101259)
chr7 (112-175)||(29893033-29893097)
chr7 (84-175)||(43187569-43187661)
chr7 (150-272)||(9179871-9179995)
chr7 (84-162)||(21067764-21067843)
chr7 (80-162)||(41827192-41827275)
chr7 (86-160)||(47879059-47879134)
chr7 (86-160)||(47914157-47914232)
chr7 (81-162)||(29615003-29615085)
chr7 (79-140)||(31401580-31401641)
chr7 (232-301)||(43187414-43187482)
chr7 (89-175)||(47066631-47066719)
chr7 (89-160)||(7719502-7719574)
chr7 (83-162)||(7993023-7993103)
chr7 (232-272)||(19810874-19810914)
chr7 (144-175)||(8078387-8078418)
chr7 (84-162)||(18838271-18838350)
chr7 (84-158)||(32883663-32883738)
chr7 (79-169)||(33892483-33892574)
chr7 (84-162)||(48117832-48117911)
chr7 (243-301)||(37972924-37972981)
chr7 (89-162)||(39027984-39028058)
chr7 (137-175)||(48117777-48117815)
chr7 (86-162)||(3634213-3634290)
chr7 (82-154)||(9179763-9179836)
chr7 (110-162)||(37327835-37327888)
chr7 (232-268)||(447858-447894)
chr7 (83-168)||(7113341-7113430)
chr7 (243-299)||(41827390-41827445)
[»] chr6 (27 HSPs)
chr6 (137-301)||(6197535-6197700)
chr6 (137-301)||(1391607-1391772)
chr6 (137-301)||(2300795-2300960)
chr6 (137-291)||(28002648-28002803)
chr6 (138-301)||(29076582-29076747)
chr6 (138-301)||(29111555-29111721)
chr6 (137-301)||(7051828-7051993)
chr6 (137-301)||(31895679-31895844)
chr6 (79-168)||(2300971-2301061)
chr6 (81-301)||(34759107-34759332)
chr6 (137-301)||(34773392-34773557)
chr6 (137-301)||(14262490-14262655)
chr6 (84-168)||(29076484-29076570)
chr6 (84-168)||(29111457-29111543)
chr6 (84-168)||(6197711-6197796)
chr6 (84-272)||(30385142-30385335)
chr6 (186-291)||(7497110-7497214)
chr6 (86-168)||(1391513-1391596)
chr6 (80-169)||(7051728-7051818)
chr6 (145-252)||(656957-657065)
chr6 (232-272)||(31067573-31067613)
chr6 (83-162)||(34773295-34773375)
chr6 (84-162)||(31895583-31895662)
chr6 (84-169)||(14262665-14262751)
chr6 (243-291)||(4200494-4200541)
chr6 (232-272)||(3848290-3848330)
chr6 (79-162)||(7497000-7497084)
[»] chr2 (58 HSPs)
chr2 (137-301)||(16269676-16269841)
chr2 (137-301)||(24776340-24776505)
chr2 (137-301)||(20605221-20605386)
chr2 (137-301)||(31170684-31170849)
chr2 (137-301)||(12407365-12407530)
chr2 (137-301)||(14198637-14198802)
chr2 (137-301)||(1789427-1789592)
chr2 (137-301)||(5093107-5093272)
chr2 (137-301)||(43847631-43847796)
chr2 (137-301)||(44765760-44765925)
chr2 (137-301)||(35317047-35317212)
chr2 (137-301)||(305525-305690)
chr2 (83-301)||(9120056-9120276)
chr2 (137-301)||(32125235-32125403)
chr2 (137-301)||(22551823-22551988)
chr2 (137-301)||(28844540-28844705)
chr2 (137-301)||(33135608-33135773)
chr2 (137-291)||(28740353-28740508)
chr2 (137-301)||(10657391-10657556)
chr2 (137-291)||(7026589-7026744)
chr2 (82-168)||(31170860-31170947)
chr2 (83-168)||(12407268-12407354)
chr2 (80-164)||(22552003-22552088)
chr2 (84-168)||(24776244-24776329)
chr2 (85-168)||(20605042-20605126)
chr2 (137-280)||(26601280-26601425)
chr2 (188-272)||(3574885-3574969)
chr2 (80-168)||(305702-305792)
chr2 (87-168)||(14198812-14198894)
chr2 (85-168)||(16269581-16269665)
chr2 (223-301)||(26788859-26788936)
chr2 (87-160)||(44765667-44765741)
chr2 (84-160)||(1789331-1789408)
chr2 (232-301)||(18177349-18177417)
chr2 (232-301)||(25288241-25288309)
chr2 (80-168)||(35316947-35317036)
chr2 (84-162)||(378868-378947)
chr2 (78-162)||(28844438-28844523)
chr2 (89-173)||(43078569-43078654)
chr2 (137-207)||(20605137-20605209)
chr2 (97-168)||(32125152-32125224)
chr2 (229-272)||(10125378-10125421)
chr2 (78-160)||(19144907-19144990)
chr2 (137-265)||(215320-215450)
chr2 (190-272)||(13833510-13833592)
chr2 (232-272)||(379019-379059)
chr2 (84-162)||(26788673-26788752)
chr2 (83-160)||(26601444-26601522)
chr2 (223-272)||(6224635-6224684)
chr2 (86-162)||(18176476-18176553)
chr2 (240-301)||(43078653-43078713)
chr2 (80-162)||(215467-215551)
chr2 (223-291)||(3463745-3463812)
chr2 (90-160)||(28740527-28740598)
chr2 (80-162)||(7026487-7026572)
chr2 (81-162)||(13833664-13833746)
chr2 (137-175)||(26788769-26788807)
chr2 (223-272)||(21370638-21370687)
[»] scaffold0400 (2 HSPs)
scaffold0400 (137-301)||(15091-15256)
scaffold0400 (84-168)||(15267-15349)
[»] scaffold0365 (2 HSPs)
scaffold0365 (137-301)||(15734-15899)
scaffold0365 (84-168)||(15910-15992)
[»] chr3 (102 HSPs)
chr3 (137-301)||(3999703-3999868)
chr3 (137-301)||(19253810-19253975)
chr3 (137-301)||(20498192-20498357)
chr3 (137-301)||(996144-996309)
chr3 (137-301)||(10139204-10139369)
chr3 (137-301)||(37820535-37820700)
chr3 (137-301)||(1440010-1440176)
chr3 (137-301)||(33807856-33808022)
chr3 (137-301)||(29448916-29449081)
chr3 (137-301)||(35337718-35337883)
chr3 (85-301)||(33996599-33996809)
chr3 (137-302)||(44762094-44762260)
chr3 (186-301)||(3206263-3206377)
chr3 (137-301)||(6589547-6589712)
chr3 (137-301)||(25418349-25418514)
chr3 (137-301)||(40246827-40246992)
chr3 (137-301)||(54625575-54625740)
chr3 (115-301)||(17946248-17946436)
chr3 (137-301)||(29029989-29030153)
chr3 (137-301)||(51699538-51699702)
chr3 (137-301)||(22057744-22057910)
chr3 (137-301)||(52114511-52114677)
chr3 (152-301)||(53929186-53929336)
chr3 (137-301)||(44906571-44906736)
chr3 (137-301)||(52618023-52618188)
chr3 (84-291)||(10728709-10728918)
chr3 (137-301)||(34484088-34484253)
chr3 (137-301)||(36674188-36674353)
chr3 (137-301)||(40897127-40897292)
chr3 (137-272)||(23753472-23753609)
chr3 (188-301)||(51737784-51737896)
chr3 (83-168)||(996319-996405)
chr3 (89-301)||(52810312-52810526)
chr3 (80-168)||(19253710-19253799)
chr3 (85-168)||(3206430-3206514)
chr3 (188-301)||(6035111-6035223)
chr3 (187-280)||(27899379-27899472)
chr3 (188-301)||(48379193-48379305)
chr3 (137-291)||(10660518-10660673)
chr3 (84-162)||(12734080-12734159)
chr3 (223-301)||(18749683-18749760)
chr3 (137-301)||(11431509-11431674)
chr3 (84-168)||(20498097-20498181)
chr3 (153-301)||(26107260-26107409)
chr3 (81-168)||(10139380-10139468)
chr3 (224-280)||(52079999-52080055)
chr3 (223-301)||(32580247-32580324)
chr3 (223-280)||(39842562-39842619)
chr3 (232-301)||(54628924-54628992)
chr3 (144-291)||(39038030-39038178)
chr3 (85-160)||(52114418-52114494)
chr3 (86-168)||(37820711-37820794)
chr3 (232-302)||(5825142-5825211)
chr3 (137-301)||(50903298-50903466)
chr3 (229-291)||(55235261-55235322)
chr3 (232-301)||(31646342-31646410)
chr3 (144-272)||(37454851-37454981)
chr3 (84-168)||(40246731-40246816)
chr3 (80-168)||(51699713-51699802)
chr3 (137-300)||(20832975-20833139)
chr3 (83-168)||(6589449-6589536)
chr3 (85-158)||(22057651-22057726)
chr3 (75-160)||(29449102-29449189)
chr3 (83-168)||(35337620-35337707)
chr3 (83-164)||(19552153-19552235)
chr3 (79-160)||(25418248-25418330)
chr3 (223-272)||(539490-539539)
chr3 (79-162)||(36674370-36674455)
chr3 (78-170)||(38772258-38772351)
chr3 (80-162)||(10660417-10660501)
chr3 (83-170)||(20832881-20832969)
chr3 (82-168)||(33808033-33808123)
chr3 (84-139)||(16010750-16010805)
chr3 (106-175)||(2024116-2024186)
chr3 (89-162)||(29029898-29029972)
chr3 (81-162)||(39842669-39842751)
chr3 (107-168)||(44762271-44762333)
chr3 (79-175)||(539608-539705)
chr3 (102-162)||(10216168-10216229)
chr3 (79-169)||(40897025-40897117)
chr3 (86-139)||(54625481-54625534)
chr3 (83-162)||(1440192-1440271)
chr3 (223-279)||(23535890-23535946)
chr3 (83-162)||(27240483-27240563)
chr3 (223-291)||(50762118-50762185)
chr3 (83-161)||(6035293-6035372)
chr3 (84-162)||(23753626-23753705)
chr3 (84-162)||(26107148-26107227)
chr3 (84-162)||(31646524-31646603)
chr3 (84-162)||(50762290-50762369)
chr3 (84-170)||(52618197-52618284)
chr3 (247-301)||(1439952-1440005)
chr3 (137-175)||(6131398-6131436)
chr3 (80-169)||(15493964-15494054)
chr3 (137-175)||(18749553-18749591)
chr3 (137-175)||(27240428-27240466)
chr3 (137-175)||(50762235-50762273)
chr3 (137-175)||(54628826-54628864)
chr3 (223-272)||(6975817-6975866)
chr3 (102-162)||(10225797-10225858)
chr3 (87-162)||(18749460-18749536)
chr3 (91-162)||(44906753-44906825)
[»] chr1 (79 HSPs)
chr1 (137-301)||(19451866-19452031)
chr1 (137-301)||(45760067-45760233)
chr1 (137-301)||(35279649-35279814)
chr1 (144-302)||(21222131-21222290)
chr1 (137-301)||(28824431-28824595)
chr1 (137-301)||(45535921-45536086)
chr1 (137-301)||(47780688-47780853)
chr1 (137-301)||(730125-730291)
chr1 (137-301)||(50192608-50192774)
chr1 (137-301)||(35679186-35679351)
chr1 (137-301)||(49198327-49198491)
chr1 (137-301)||(49418061-49418226)
chr1 (145-301)||(6304310-6304468)
chr1 (137-301)||(29556081-29556246)
chr1 (137-301)||(48524296-48524461)
chr1 (144-301)||(47654409-47654568)
chr1 (137-301)||(46328019-46328184)
chr1 (140-301)||(51701560-51701722)
chr1 (80-168)||(28824606-28824695)
chr1 (81-168)||(953697-953785)
chr1 (186-301)||(32589011-32589125)
chr1 (137-301)||(6312551-6312716)
chr1 (137-301)||(25612134-25612299)
chr1 (137-301)||(28387451-28387616)
chr1 (137-301)||(29396446-29396611)
chr1 (232-301)||(31572255-31572323)
chr1 (84-160)||(45760252-45760329)
chr1 (137-272)||(18798468-18798605)
chr1 (137-272)||(49230863-49231000)
chr1 (232-301)||(9322558-9322626)
chr1 (137-301)||(15835111-15835276)
chr1 (84-168)||(19452084-19452169)
chr1 (84-168)||(21222029-21222114)
chr1 (84-168)||(22183251-22183336)
chr1 (137-280)||(33025489-33025635)
chr1 (85-168)||(35279554-35279638)
chr1 (81-291)||(38536157-38536369)
chr1 (81-291)||(38558375-38558587)
chr1 (85-168)||(49198501-49198585)
chr1 (232-291)||(955824-955882)
chr1 (80-162)||(6304494-6304577)
chr1 (86-168)||(47780502-47780585)
chr1 (223-301)||(9577490-9577567)
chr1 (77-161)||(35679369-35679455)
chr1 (140-301)||(37014698-37014860)
chr1 (223-301)||(48177520-48177597)
chr1 (84-168)||(730030-730114)
chr1 (137-245)||(22183347-22183457)
chr1 (84-168)||(50192785-50192870)
chr1 (137-215)||(953796-953876)
chr1 (88-168)||(47654587-47654669)
chr1 (83-168)||(49417964-49418050)
chr1 (80-136)||(28541381-28541437)
chr1 (190-291)||(29219318-29219418)
chr1 (139-272)||(5495182-5495317)
chr1 (137-175)||(14494186-14494224)
chr1 (79-160)||(46327918-46328000)
chr1 (79-162)||(6312449-6312534)
chr1 (84-160)||(33025393-33025470)
chr1 (232-280)||(31622537-31622585)
chr1 (84-162)||(9322740-9322819)
chr1 (80-162)||(9577672-9577755)
chr1 (84-168)||(14494093-14494175)
chr1 (84-162)||(49230767-49230846)
chr1 (89-162)||(15835293-15835367)
chr1 (91-160)||(42290732-42290802)
chr1 (79-162)||(29219163-29219248)
chr1 (83-162)||(29396628-29396708)
chr1 (232-272)||(48668861-48668901)
chr1 (84-162)||(8141368-8141447)
chr1 (84-162)||(25612038-25612117)
chr1 (84-162)||(42657712-42657791)
chr1 (137-175)||(47784406-47784444)
chr1 (89-162)||(48177702-48177776)
chr1 (81-162)||(48194585-48194667)
chr1 (81-162)||(48203343-48203425)
chr1 (102-162)||(19007586-19007647)
chr1 (96-160)||(31572405-31572470)
chr1 (91-162)||(28387633-28387705)
[»] scaffold0037 (2 HSPs)
scaffold0037 (137-301)||(100195-100360)
scaffold0037 (83-160)||(100098-100176)
[»] scaffold0151 (2 HSPs)
scaffold0151 (186-301)||(38663-38776)
scaffold0151 (86-167)||(38755-38837)
[»] scaffold0276 (1 HSPs)
scaffold0276 (137-301)||(597-762)
[»] scaffold0306 (1 HSPs)
scaffold0306 (84-291)||(13812-14021)
[»] scaffold0152 (1 HSPs)
scaffold0152 (84-291)||(21306-21515)
[»] scaffold0543 (2 HSPs)
scaffold0543 (137-301)||(10544-10709)
scaffold0543 (89-162)||(10453-10527)
[»] scaffold0651 (2 HSPs)
scaffold0651 (88-162)||(8654-8729)
scaffold0651 (137-175)||(8746-8784)
[»] scaffold1504 (2 HSPs)
scaffold1504 (137-301)||(847-1012)
scaffold1504 (89-162)||(756-830)
[»] scaffold0922 (2 HSPs)
scaffold0922 (137-289)||(4184-4337)
scaffold0922 (73-162)||(4076-4167)
[»] scaffold0042 (2 HSPs)
scaffold0042 (232-301)||(58134-58202)
scaffold0042 (84-162)||(58274-58353)
[»] scaffold0110 (1 HSPs)
scaffold0110 (232-301)||(39675-39743)
[»] scaffold0054 (2 HSPs)
scaffold0054 (232-301)||(36965-37033)
scaffold0054 (93-175)||(37050-37133)
[»] scaffold0472 (1 HSPs)
scaffold0472 (83-129)||(1926-1972)
[»] scaffold0010 (2 HSPs)
scaffold0010 (137-175)||(233721-233759)
scaffold0010 (137-175)||(234569-234607)
[»] scaffold0287 (1 HSPs)
scaffold0287 (86-162)||(11795-11872)


Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 84 - 301
Target Start/End: Complemental strand, 24502089 - 24501870
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnn 182  Q
    ||||||||||||||||| |||| ||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||| ||||||           
T  24502089 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaa 24501990  T
Q  183 gtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||  ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24501989 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttt 24501891  T
Q  281 tgatggattttatgggatttt 301  Q
    ||||||||||| |||||||||    
T  24501890 tgatggattttgtgggatttt 24501870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 42938339 - 42938174
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||| ||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  42938339 aaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 42938240  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  42938239 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 42938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 2705041 - 2704876
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  2705041 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 2704942  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||    
T  2704941 tcaaaatcattcaaatttcgaatgattgtttaataaatca-aattttgatggattttgtgggatttt 2704876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 144 - 301
Target Start/End: Complemental strand, 26374645 - 26374487
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaat 241  Q
    ||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| ||||||||||    
T  26374645 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 26374546  T
Q  242 cattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  26374545 cattcaaatttcgaaggattgtttaataaataaga-ttttgatggattttgtgggatttt 26374487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 23115390 - 23115226
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  23115390 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 23115291  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  23115290 tcaaa-tcattcaaatttggaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 23115226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 137 - 280
Target Start/End: Complemental strand, 32711504 - 32711359
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  32711504 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 32711405  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32711404 tcaaaatcatttaaatttcgaaggattgtttaataaatcagatttt 32711359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 42937337 - 42937500
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||| ||||||||||       |||  |||||||||||||  |||||||||||||||       |||||||| |||    
T  42937337 aaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtat 42937434  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  42937435 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 42937500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 42735499 - 42735334
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||| ||||||       | |  |||||||||||| |||||||||||||||||       |||||||| |||    
T  42735499 aaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtat 42735400  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  42735399 tcaaaatcattcaaatttcgaagtattgtttaataaatcaga-ttttgatggattttgtgggatttt 42735334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 5576843 - 5576677
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||        ||| |||| ||    
T  5576843 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggta 5576744  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| |||||||||    
T  5576743 ttcaaaatcattcaaatttcgaagaattgtttaataaaccaga-ttttgatggattttgtgggatttt 5576677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 43959642 - 43959796
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg-gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatatt 235  Q
    |||||||||||||||||||||||||||||||||||||||       ||| || |||||||||||||| ||||||||||||       | |||||| ||||    
T  43959642 aaaagtcttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgtgtattcaatcaagattcttaatcacttcaaaaaagactagtggtatt 43959741  T
Q  236 caaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  43959742 caaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttgatggatttt 43959796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 280
Target Start/End: Original strand, 41479081 - 41479226
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       ||||| || |||    
T  41479081 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtat 41479180  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  41479181 tcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 41479226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 144 - 301
Target Start/End: Complemental strand, 7507114 - 7506956
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaat 241  Q
    ||||||||||||||| |||||| |||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||||||||     
T  7507114 ttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaac 7507015  T
Q  242 cattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  7507014 cattcaaattttgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 7506956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 10392459 - 10392294
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| |||| |||||||||||||||||||||||||||||        ||  ||| ||||||||||||||| ||||||||||       |||||||| |||    
T  10392459 aaaaatcttatgttattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtat 10392360  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  10392359 tcagaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 10392294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 39467690 - 39467525
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  39467690 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 39467591  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  39467590 tcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatggattttatgggatttt 39467525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 301
Target Start/End: Complemental strand, 43166961 - 43166747
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc-- 185  Q
    |||||||||| | ||||||| |||||||||||| | ||||| || | ||||| |||||||| ||||||||||||| | ||||  ||||       |||      
T  43166961 tgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 43166862  T
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    ||||||||||||||||||||||  ||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||    
T  43166861 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatg 43166763  T
Q  286 gattttatgggatttt 301  Q
    |||||| |||||||||    
T  43166762 gattttgtgggatttt 43166747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 14782357 - 14782192
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  14782357 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 14782258  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||||    
T  14782257 tcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 14782192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 44726032 - 44725867
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  44726032 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 44725933  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||||    
T  44725932 tcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 44725867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 23115487 - 23115401
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  23115487 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 23115401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 2705137 - 2705052
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  2705137 gggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 2705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 9288679 - 9288514
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||| | | || |||||||       |||| ||| |||    
T  9288679 aaaagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtat 9288580  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||| ||||| |||||||||    
T  9288579 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgaattttgtgggatttt 9288514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 18958949 - 18958784
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||| ||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  18958949 aaaagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 18958850  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||| ||||||||| |||||||||    
T  18958849 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttaatggattttgtgggatttt 18958784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 19718103 - 19717938
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  19718103 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 19718004  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||| ||||||||||||||  || |||| ||||||||| |||||||||    
T  19718003 tcaaaatcattcaaatttcgaagaattgtttaataaattgga-ttttaatggattttgtgggatttt 19717938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 42735595 - 42735510
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  42735595 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 42735510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 5576942 - 5576854
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaa-agtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||| |||||    
T  5576942 ttagggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactcttt 5576854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 7507220 - 7507132
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||| ||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  7507220 ttagagggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 7507132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 301
Target Start/End: Original strand, 26856104 - 26856216
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||  || ||||||||||    
T  26856104 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattgga-ttttgatgga 26856202  T
Q  288 ttttatgggatttt 301  Q
    |||| |||||||||    
T  26856203 ttttgtgggatttt 26856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 16362180 - 16362335
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| ||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || || ||||       |||| ||| |||    
T  16362180 aaaaatcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtat 16362279  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  16362280 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 16362335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 42937250 - 42937325
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 42937325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 291
Target Start/End: Complemental strand, 10295550 - 10295448
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  10295550 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 10295452  T
Q  288 tttt 291  Q
    ||||    
T  10295451 tttt 10295448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 26374746 - 26374661
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||| |||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  26374746 ggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactcttt 26374661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 41478989 - 41479070
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 41479070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 4031480 - 4031343
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || || | ||       |||| ||| |||    
T  4031480 aaaagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtat 4031381  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4031380 tcaaaatcattcaaatttcgaaggattgtttaataaat 4031343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 18306183 - 18306046
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  18306183 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 18306084  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18306083 tcaaaatcattcaaatttcgaaagattgtttaataaat 18306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 31623679 - 31623816
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||  || ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  31623679 aaaagtctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 31623778  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31623779 tcaaaatcattcaaatttcgaaggattgtttaataaat 31623816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 4403188 - 4403257
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttt 302  Q
    |||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  4403188 tattcaaaatcattcaaatttcgaaggattgtttaataaat-tgggttttgatggattttgtgggattttt 4403257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 26373692 - 26373778
Alignment:
Q  84 gggggtgtattgg-atcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||| |||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  26373692 gggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 26373778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 7466319 - 7466456
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || ||| |||       |||| ||| |||    
T  7466319 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtat 7466418  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  7466419 tcaaaatcattcaaattttgaagaattgtttaataaat 7466456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 24214908 - 24214824
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||| |||| ||| ||||||||||||| ||||| |||||  |||||||||||| ||||||||||||| |||||    
T  24214908 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttt 24214824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 32497509 - 32497646
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| ||||||| ||||||||||| | ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  32497509 aaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 32497608  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||||||||||||||| |||||||||||||||    
T  32497609 tcaaaatcattcaaatttcgaatgattgtttaataaat 32497646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 41069798 - 41069854
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcat 135  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  41069798 atttagggggtgtattagattaagattttaagggattttaaaagattttttcatcat 41069854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 43959549 - 43959631
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||| ||||| |||||||| ||||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 43959631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 32711599 - 32711515
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||| |||| |||| || ||||||||| ||||| |||||| |||||| ||||| ||||||||||||| |||||    
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttt 32711515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 42306007 - 42305874
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||        ||| ||| |||    
T  42306007 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtat 42305908  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaat 268  Q
    ||||||| ||||||||||||||||||||||||||    
T  42305907 tcaaaataattcaaatttcgaaggattgtttaat 42305874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 42938433 - 42938350
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||| |||||||| |  ||||||||||||||||||||| ||||| | |||| |||||||||||| ||||||||||||| |||||    
T  42938433 gggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttt 42938350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 8543406 - 8543488
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcat-gaaaagtcttgtgttattcaatcaagat 163  Q
    |||||||||||| ||||| |||| ||||||||||||||||| |||||| |||||  |||||| ||||| ||||||||||||||    
T  8543406 agggggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgtggtattcaatcaagat 8543488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 32497376 - 32497450
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||| || |||||||||||||| ||||| |||||| |||||||||||| |||||||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaaga 32497450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 7466222 - 7466302
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| || | |||||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  7466222 aggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaga 7466302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 39189939 - 39189899
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  39189939 tattcaacatcattcaaatttcgaaggattgtttaataaat 39189899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 13478375 - 13478328
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 279  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||    
T  13478375 tattcaaaatcttttaaatttcgaaggattgtttaataaattagattt 13478328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 14782453 - 14782374
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  14782453 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 14782374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 44726128 - 44726049
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  44726128 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 44726049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 8410523 - 8410454
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttt 302  Q
    |||||||||||||| |||||| ||||||||||||| |||||  ||  ||||||||||||| ||||||||||    
T  8410523 tattcaaaatcattgaaatttggaaggattgtttactaaattgga-ctttgatggattttgtgggattttt 8410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 10295694 - 10295620
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  10295694 tgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaaga 10295620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 29260367 - 29260281
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatgaaaagtcttgtgttattcaatcaagatt 164  Q
    ||||||||||||||||||||   |||||||| ||||||||||||| ||||||  |    |||||||||||| |||||||||||||||    
T  29260367 atttagggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatt 29260281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 31623582 - 31623662
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| || || ||||||||||||||||| || ||| ||||||||||||  ||||||||||||    
T  31623582 aggggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaaga 31623662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 37857191 - 37857258
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||| ||| |||||||| ||||||||||||  ||||||||||||||||||  || ||||||||||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgga-ttttgatggatttt 37857258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 4031576 - 4031497
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| ||||| |||||||    
T  4031576 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaaga 4031497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 42306103 - 42306024
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  42306103 ggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaga 42306024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 9771128 - 9771049
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    |||||||||| | |||||||||||||||||||| ||||||  |||||| |||||  |||||| |||||||||| | ||||||    
T  9771128 tgtattggattaagattttaagggattttaaaatattttt--atcatgaaaaagcattgtgtcattcaatcaatactctttg 9771049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 16362081 - 16362163
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||| |||||| ||| | |||| || |||||||||||||| ||||| || ||| |||||| ||||| |||||||||||||    
T  16362081 ttaggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaga 16362163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 18306282 - 18306200
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    ||||||| ||||||| || | |||| || || |||||| |||||||||| || ||||||| |||||||| |||||||||||||    
T  18306282 ttaggggatgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattcaatcaaga 18306200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 4950141 - 4950073
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||| |||| || |||| |||||||||| ||| |||||||||| ||| ||| |||||    
T  4950141 tattcaaaatcattcaagtttcaaaagattatttaataaattaga-ttttgatggaatttgtggaatttt 4950073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 35142041 - 35142117
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaa 160  Q
    ||||||||||||||   |||||||| ||||||||||||| |||||| |  |  |||||||||||| |||||||||||    
T  35142041 ggggtgtattggattgagattttaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaa 35142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 39467778 - 39467706
Alignment:
Q  91 tattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 39467706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 83 - 301
Target Start/End: Complemental strand, 39173 - 38953
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnn 181  Q
    |||||||||||||||||| |||| ||| ||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||| ||||||          
T  39173 agggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattctttatcatttaaaaaa 39074  T
Q  182 ngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 279  Q
     |||  |||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  39073 agtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcaga-tt 38975  T
Q  280 ttgatggattttatgggatttt 301  Q
    |||||||||||| |||||||||    
T  38974 ttgatggattttgtgggatttt 38953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 8e-55; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 79 - 301
Target Start/End: Complemental strand, 7017020 - 7016796
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnn 177  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||| |||||   ||||      
T  7017020 atttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaa 7016921  T
Q  178 nnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 275  Q
         ||| ||  |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7016920 aaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 7016821  T
Q  276 atttttgatggattttatgggatttt 301  Q
    | |||||||||||||| |||||||||    
T  7016820 a-ttttgatggattttgtgggatttt 7016796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 21147051 - 21147216
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  21147051 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 21147150  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  21147151 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 21147216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 139257 - 139422
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||| ||||||||||       |||||||| |||    
T  139257 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtat 139356  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||    
T  139357 tcaaaatcattcaaatttcgaaggattgtttaataaaccaga-ttttgatggattttgttggatttt 139422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 5273141 - 5272976
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgt--ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||||||||||||||||       ||| |  ||||||||||||||||||||||||| ||       |||||||| |||    
T  5273141 aaaagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtat 5273042  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  5273041 tcaaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttgatggattttgtgggatttt 5272976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 33656265 - 33656098
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattcttt--gtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgat 232  Q
    ||||||||||||||||||||||||||||||||  |||||||       |||  ||||||||||||||||||||||||||||||        |||| || |    
T  33656265 aaaagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggt 33656166  T
Q  233 attcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33656165 attcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 33656098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 32158120 - 32157954
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||||||       |||  |||||||||||||||||| | |||||||||        |||||||| ||    
T  32158120 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggta 32158021  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||    
T  32158020 ttcaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgacggattttgtgggatttt 32157954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 6460776 - 6460941
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||| |||||||||||||||||||||||||||||       ||| ||  |||||||||||||||||||||||| ||        ||||||| |||    
T  6460776 aaaagtcttatgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtat 6460875  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||||||||    
T  6460876 tcaaaatcattcaaatttcgaaggtttgtttaataaatcaga-ttttgatggattttgagggatttt 6460941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 27459171 - 27459007
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||| |||||||||||||||||       ||| ||  |||||||||||||||||||||||||||       |||||||| |||    
T  27459171 aaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtat 27459073  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  27459072 tcaaaatcattcagattttgaaggattgtttaataaattaga-ttttgatggattttgtgggatttt 27459007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 849182 - 849296
Alignment:
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    ||||||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  849182 gtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgata 849280  T
Q  286 gattttatgggatttt 301  Q
    |||||| |||||||||    
T  849281 gattttgtgggatttt 849296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 1152325 - 1152160
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  1152325 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtat 1152226  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||| ||||||||||||||||  || |||||||||||||| |||||||||    
T  1152225 tcaaaatcattcaaatttcgagggattgtttaataaattgga-ttttgatggattttgtgggatttt 1152160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 33656359 - 33656276
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  33656359 gggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 33656276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 4550479 - 4550314
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       | | ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  4550479 aaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 4550380  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||| |||||    
T  4550379 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtggaatttt 4550314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 291
Target Start/End: Complemental strand, 4240674 - 4240519
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| ||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  4240674 aaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 4240575  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  4240574 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 4240519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 298
Target Start/End: Original strand, 22746281 - 22746443
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||| | ||||||||||||       ||| ||  |||||||||||| ||| || |||||||       |||| |||||||    
T  22746281 aaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatat 22746380  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggat 298  Q
    |||||||||||||||||||||| |||||||||||||||  || |||||||||||||| ||||||    
T  22746381 tcaaaatcattcaaatttcgaatgattgtttaataaat-tgaattttgatggattttgtgggat 22746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 13925915 - 13926080
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||| | || || ||||       |||| ||| |||    
T  13925915 aaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtat 13926014  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  13926015 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 13926080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 14000327 - 14000162
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| ||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  14000327 aaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 14000228  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||||    
T  14000227 tcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 14000162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 301
Target Start/End: Complemental strand, 7947742 - 7947630
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || |||||||       |||| | |||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  7947742 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 7947644  T
Q  288 ttttatgggatttt 301  Q
    |||| ||| |||||    
T  7947643 ttttgtggaatttt 7947630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 5273276 - 5273194
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatg--aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||||  |||| ||||||| |||||||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattcttt 5273194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 16894174 - 16894044
Alignment:
Q  87 ggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc- 185  Q
    ||||||||||||||  ||| ||||||||||||||||| ||||| ||||| |||| ||||||| ||||||||||| |||||||   ||||       |||     
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatcataaaaattcttgtggtattcaatcaaaattctttccaatttaaaaaaagtct 16894075  T
Q  186 -gtggtattcaatcaagactcttaatcactt 215  Q
     ||||||||||||||||||||||||||||||    
T  16894074 tgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 39852417 - 39852494
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattgga-ttttgatggattttatgggatttt 39852494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 14465397 - 14465284
Alignment:
Q  187 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgg 286  Q
    ||||||||||||||||||||| ||| |||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||| || ||||||||     
T  14465397 tggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcgga-ttttgatga 14465299  T
Q  287 attttatgggatttt 301  Q
    ||||| ||| |||||    
T  14465298 attttgtggaatttt 14465284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 21146955 - 21147040
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| ||||||| |||| ||||||||||||| |||||    
T  21146955 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactcttt 21147040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 291
Target Start/End: Complemental strand, 1461357 - 1461205
Alignment:
Q  140 agtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattca 237  Q
    ||||||||| ||||||||||||| ||||||| ||||       ||| ||  |||||||||||||||| || |||||||       |||| | | ||||||    
T  1461357 agtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattca 1461258  T
Q  238 aaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  1461257 aaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 1461205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 37013898 - 37014035
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| | | |||    
T  37013898 aaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtat 37013997  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37013998 tcaaaatcattcaaatttcgaagggttgtttaataaat 37014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 43319134 - 43319214
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||    
T  43319134 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaaga 43319214  T

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Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 6460682 - 6460765
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||| |||| |||| ||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||| |||||    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactcttt 6460765  T

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Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 40013924 - 40013791
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||        ||| ||| |||    
T  40013924 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttat 40013825  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaat 268  Q
    ||||||||||||||||||||||||||||||||||    
T  40013824 tcaaaatcattcaaatttcgaaggattgtttaat 40013791  T

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Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 5949189 - 5949247
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  5949189 tattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 5949247  T

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Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 32158218 - 32158132
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||| ||||| |||| |||| ||||| ||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  32158218 agggggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 32158132  T

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Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 9220874 - 9220796
Alignment:
Q  190 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaat 268  Q
    |||||||||||||||||| |||||||       ||||  ||||||||||||||||||||||||| ||||||||||||||    
T  9220874 tattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaat 9220796  T

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Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 9689691 - 9689794
Alignment:
Q  184 tcgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttga 283  Q
    |||||||||||||||||||||||| |||||||       |||| ||| |||| ||||||||| |||||||||| |||||||| |||||| ||| ||||||    
T  9689691 tcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattaga-ttttga 9689788  T
Q  284 tggatt 289  Q
    ||||||    
T  9689789 tggatt 9689794  T

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Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 14000429 - 14000344
Alignment:
Q  79 atttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  14000429 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 14000344  T

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Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 4550575 - 4550496
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  4550575 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 4550496  T

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Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 27459265 - 27459182
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||| ||||||||||| | ||||| |||||| |||||||| ||  ||||||||||||| |||||    
T  27459265 gggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactcttt 27459182  T

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Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 5273183 - 5273145
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  5273183 aaaagtcttgtgttattcaatcaagattttttgtcattt 5273145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 28594541 - 28594447
Alignment:
Q  72 aattgttatttagggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcat-gaaaagtcttgtgttattcaatcaagatt 164  Q
    ||||| |||| |||||||||||| |||   ||||||||| |||||||||||| |||||| || ||  |||||||||||| |||||||||||||||    
T  28594541 aattgatattaagggggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagatt 28594447  T

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Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 9689553 - 9689633
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||| | |||| ||||||||||||| ||| ||||| || ||||||| |||||||| ||||||||||||| |||||    
T  9689553 gtgtattggattatgattctaagggattttaatagacttttt-attatgaaaaagtcttgtggtattcaatcaagactcttt 9689633  T

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Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 5949093 - 5949131
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  5949093 aaaagtcttgtggtattcaatcaagactctttgtcattt 5949131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 27786210 - 27786280
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattca 155  Q
    ||||||||||||| | ||||| |||||||||||||||| ||||| || ||  |||||||||||| ||||||    
T  27786210 gggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca 27786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 37013807 - 37013881
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 37013881  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 13925846 - 13925898
Alignment:
Q  111 ggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||||||||| || ||| |||||||||||| |||| ||||||||    
T  13925846 ggattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaaga 13925898  T

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Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 86 - 302
Target Start/End: Original strand, 25445983 - 25446199
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnngt 184  Q
    ||||||||||||| | |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||| ||||||||||        |    
T  25445983 gggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaagatt-tttgtcatttaaaaaaatt 25446080  T
Q  185 c--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttg 282  Q
    |  ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  25446081 cttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttg 25446179  T
Q  283 atggattttatgggattttt 302  Q
    ||||||||| ||||||||||    
T  25446180 atggattttgtgggattttt 25446199  T

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Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 25331114 - 25331279
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       ||||||||||||    
T  25331114 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatat 25331213  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||    
T  25331214 tcaaaatcattcaaatttcaaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 25331279  T

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Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 7007357 - 7007522
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||| ||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  7007357 aaaagtcttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 7007456  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  7007457 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatgaattttgtgggatttt 7007522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 28541681 - 28541846
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  28541681 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 28541780  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| |||||    
T  28541781 tcaaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttgatggattttgtggaatttt 28541846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 32951059 - 32950894
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||| ||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  32951059 aaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 32950960  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  32950959 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatgaattttgtgggatttt 32950894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 55302826 - 55302991
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||| ||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  55302826 aaaagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 55302925  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||    
T  55302926 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggatattgtgggatttt 55302991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 1044792 - 1044955
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattc 236  Q
    ||||||||||||||||||||||||||||| |||||||||        | ||||||||||||||||||||||||||||||       |||||||| |||||    
T  1044792 aaaagtcttgtgttattcaatcaagattccttgtcatttaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 1044891  T
Q  237 aaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  1044892 aaaaccattcaactttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 1044955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 41881306 - 41881140
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||        || ||||| ||    
T  41881306 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggta 41881207  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  41881206 ttcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 41881140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 37046675 - 37046509
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||||||       ||   ||||||||||||||||||||||||||||||        |||||||||||    
T  37046675 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgata 37046576  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  37046575 tttaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtggaatttt 37046509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 12112928 - 12113093
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||| ||||||||||||||       ||||| || |||    
T  12112928 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtat 12113027  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| |||||    
T  12113028 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttaatggattttgtggaatttt 12113093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 25504862 - 25504697
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||  ||||||        ||  ||| ||||||||||||||||||||||||||       ||| ||||||||    
T  25504862 aaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatat 25504763  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  25504762 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 300
Target Start/End: Original strand, 1112876 - 1113040
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| |||| |||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  1112876 aaaagtattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 1112975  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattt 300  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||    
T  1112976 tcaaaatcattcaaatttcaaatgattgtttaataaatcaga-ttttgatggattttgtgggattt 1113040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 19741131 - 19740966
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  |||||||||| |||||||| ||||||||||       |||| ||| |||    
T  19741131 aaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtat 19741032  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  19741031 taaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgatggattttgtgggatttt 19740966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 22201998 - 22202163
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  22201998 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 22202097  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| ||||||| || ||||||||||||||| | | |||||||||||||| |||||||||    
T  22202098 tcaaaatcattaaaatttcaaaagattgtttaataaat-aaaattttgatggattttgtgggatttt 22202163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 84 - 291
Target Start/End: Original strand, 23987143 - 23987352
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnn 182  Q
    |||| |||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||||||| ||||||||||| | ||||||||||||           
T  23987143 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactctttgtcattttaaaaaa 23987242  T
Q  183 gtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||| ||  |||||||||||| ||| || |||||||       |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  23987243 gtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattaga-ttt 23987341  T
Q  281 tgatggatttt 291  Q
    |||||||||||    
T  23987342 tgatggatttt 23987352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 39479580 - 39479413
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtgat 232  Q
    ||||||||||||||||||||||||||||| |||||||||       |||  ||||||||||||||||||||||||||||||         | || ||| |    
T  39479580 aaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggt 39479481  T
Q  233 attcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  39479480 attcaaaatcattcaaatttcgaagaattgtttaataaatcaga-ttttgatggattttgtgggatttt 39479413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 23464938 - 23465103
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtgg--tattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||| ||||||||||||||||| |||||||||       ||  ||   ||||||||||||||||||||||||||       |||||||| |||    
T  23464938 aaaagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtat 23465037  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  23465038 tcaaaaccattcaaatttcgaaggattgtttaataaatcaga-atttgatggattttgtgggatttt 23465103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 30009900 - 30009735
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||| |||||| ||||||| ||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  30009900 aaaagtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 30009801  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| ||||||  || ||||||||||||||||||| |||||||||||||| |||||||||    
T  30009800 tcaaaatcatttaaattttaaatgattgtttaataaatcaga-ttttgatggattttgtgggatttt 30009735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 301
Target Start/End: Complemental strand, 34228798 - 34228641
Alignment:
Q  145 tgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatc 242  Q
    |||||||||||||||||||||||||||||||       |||  ||||||||||||||| | ||||||||||||       |||||||| |||||||||||    
T  34228798 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatc 34228699  T
Q  243 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||| |||||||||| ||||||||||||||||||| |||||||||||||| | |||||||    
T  34228698 attgaaatttcgaatgattgtttaataaatcaga-ttttgatggattttgtaggatttt 34228641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 280
Target Start/End: Complemental strand, 31314951 - 31314810
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||| |||||||||||||||||||||       |||  |||||||||||    |||||||||||||||       |||||||| |||    
T  31314951 aaaagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtat 31314856  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31314855 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 31314810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 42786718 - 42786832
Alignment:
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    ||||||||||||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  42786718 gtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcata-ttttgatg 42786816  T
Q  286 gattttatgggatttt 301  Q
    |||||| ||| |||||    
T  42786817 gattttgtggaatttt 42786832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 137 - 278
Target Start/End: Complemental strand, 46635865 - 46635722
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| |||||| |||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       || ||||  |||    
T  46635865 aaaaatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtat 46635766  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatt 278  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  46635765 tcaaaatcattcaaatttcgaaggattgtttaataaataagatt 46635722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 53275822 - 53275987
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| |||||||||||||||| |||||| ||||||||||       ||| ||  |||||||||||||| | ||||||||||       ||||||||||||    
T  53275822 aaaaatcttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatat 53275921  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||    
T  53275922 ttaaaatcattcaaatttcgaaggattgtgtaataaatcaga-ttttgatggattttgtgagatttt 53275987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 7249900 - 7249823
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 7249823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 41320853 - 41320955
Alignment:
Q  195 aatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatg 294  Q
    |||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtg 41320951  T
Q  295 ggat 298  Q
    ||||    
T  41320952 ggat 41320955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 5441387 - 5441552
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  5441387 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 5441486  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  5441487 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 5441552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 9163059 - 9163224
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       |||  ||||||||||||||||| | || ||||| |       |||| |||||||    
T  9163059 aaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatat 9163158  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||| |||||    
T  9163159 tcaaaatcattcaaatttcgaaggattgtttaataaatta-aattttgatggattttgtggaatttt 9163224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 27768039 - 27768204
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  27768039 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 27768138  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  27768139 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 27768204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 3436631 - 3436741
Alignment:
Q  190 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 289  Q
    ||||||||||||||||||||||| ||        |||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  3436631 tattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatgaatt 3436729  T
Q  290 ttatgggatttt 301  Q
    || |||||||||    
T  3436730 ttgtgggatttt 3436741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 22201897 - 22201987
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  22201897 atttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactcttt 22201987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 24131195 - 24131040
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  24131195 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 24131096  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||          ||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  24131095 tcaaa----------tttcgaatgattgtttaataaatcaga-ttttgatggattttgtgggatttt 24131040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 1044697 - 1044782
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  1044697 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 1044782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 37915810 - 37915975
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||| | ||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  37915810 aaaagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 37915909  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  37915910 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 37915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 54341127 - 54341292
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||| || ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  54341127 aaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 54341226  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  54341227 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 54341292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 51320904 - 51321059
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  51320904 aaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 51321003  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  51321004 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 51321059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 41881403 - 41881317
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  41881403 gggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 41881317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 32322074 - 32322239
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||| |||| |||| |||||||| ||||||||||||       ||| ||  |||||||||||||| | || |||||||       |||| ||| |||    
T  32322074 aaaagtcatgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtat 32322173  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  32322174 tcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatggattttgtgggatttt 32322239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 37828625 - 37828460
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| ||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||| | || |||| ||       |||| ||| |||    
T  37828625 aaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtat 37828526  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  37828525 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 37828460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 42786650 - 42786739
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattctt 167  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||| ||||    
T  42786650 tttagggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 42786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 54853691 - 54853526
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||| ||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  54853691 aaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 54853592  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||| ||||||||||| ||||||||||||||||||  || |||||||||||||| |||||||||    
T  54853591 tcaaaattattcaaatttcaaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 54853526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 49835036 - 49834899
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       | | ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  49835036 aaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 49834937  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49834936 tcaaaatcattcaaatttcgaaggattgtttaataaat 49834899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 24131289 - 24131206
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 24131206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 291
Target Start/End: Complemental strand, 40537368 - 40537218
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||| ||||||||||||       |||  ||||||||||||||| ||||||||||||||       ||     | |||    
T  40537368 aaaagtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaatgt-----ggtat 40537274  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||| |||||||||| |||||||||||||||| || ||||||||||||||    
T  40537273 tcaaaatcatttaaatttcgaatgattgtttaataaatctga-ttttgatggatttt 40537218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 31315043 - 31314968
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaaga 31314968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 25331017 - 25331103
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| |||| |||  |||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  25331017 agggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 25331103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 291
Target Start/End: Complemental strand, 29649837 - 29649735
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  29649837 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattgga-ttttgatgga 29649739  T
Q  288 tttt 291  Q
    ||||    
T  29649738 tttt 29649735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 39479677 - 39479591
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| |||||||||  ||||||||||| ||||| |||||  |||||||||||| ||||||||||||| |||||    
T  39479677 agggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttt 39479591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 48261198 - 48261275
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 48261275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 272
Target Start/End: Complemental strand, 32684235 - 32684074
Alignment:
Q  113 attttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaa 209  Q
    |||||||| || ||||| || ||||||| |||||||| |||||||| |||||||||||||||||       ||  ||  |||||||||||||||| || |    
T  32684235 attttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttca 32684136  T
Q  210 tcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  32684135 tca-tttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 32684074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 24736336 - 24736416
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaagtcttgtgttattcaatcaagattctttg 169  Q
    |||||||||| | |||| ||||| ||||||||||||||||| || |||||| |||||||| ||||||||||||| ||||||    
T  24736336 tgtattggattaggattctaaggaattttaaaagattttttaattatgaaatgtcttgtgatattcaatcaagactctttg 24736416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 30967522 - 30967385
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||  ||  |||||||||||||| | || |||||||       |||| ||| |||    
T  30967522 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtat 30967423  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  30967422 tcaaaatcattcaaatttcaaaggattgtttaataaat 30967385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 46635959 - 46635876
Alignment:
Q  87 ggtgtattggatcacgattttaagggattttaaaagattttttcatcatg--aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||| |||| |||| |||||||||||| ||||| ||||||  |||||||||||| ||||||||||||| |||||    
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactcttt 46635876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 7250090 - 7250007
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||||| ||||||||||| ||||| |||||| |||| ||||||| ||||||||||||| |||||    
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttt 7250007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 28483935 - 28484019
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  28483935 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 28484019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 28541587 - 28541670
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| |||||||||||||||||  |||| || ||| |||||||||||| ||||||||||||| |||||    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttt 28541670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 37046769 - 37046686
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||| |||||  |||||||||||| ||||||||||||| |||||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttt 37046686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 30010001 - 30009911
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||||||| |||| |||||||||||||||||  |||| || ||| ||||||||| |  ||||||||||||| |||||    
T  30010001 atttagggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactcttt 30009911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 30967613 - 30967539
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| | ||||||| |||||||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  30967613 tgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaga 30967539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 40537465 - 40537379
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||  |||||  |||||||||||| |||||||| |||| |||||    
T  40537465 agggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactcttt 40537379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 44770979 - 44770911
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||| |||||||||||||||||||  || ||||| |||||||| |||||||||    
T  44770979 tattcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttggtggattttgtgggatttt 44770911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 1112784 - 1112865
Alignment:
Q  87 ggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatgaaaa-gtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||| |||| ||||  ||||||||||| |||||| |||||||||| |||||||||||||||||||||| |||||    
T  1112784 ggtgtattggatcatgattctaag--attttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactcttt 1112865  T

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Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 291
Target Start/End: Complemental strand, 36479478 - 36479299
Alignment:
Q  113 attttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaa 209  Q
    ||||||||||||||||  || ||||||| |||||||| ||||||||||| | ||||||||||||       ||| ||  ||||||||| |||| | || |    
T  36479478 attttaaaagattttta-attatgaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttca 36479380  T
Q  210 tcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||       |||| ||| |||||||||| ||||||||||||||||||| ||||||||||  || ||||||||||||||    
T  36479379 tcacttaaaaaaagtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattgga-ttttgatggatttt 36479299  T

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Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 27454210 - 27454136
Alignment:
Q  226 tagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||| ||||||||||||||||||||| ||| |||| |||||||||||||| |||||||| ||||| ||| |||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcaga-ttttgatgaattttgtggaatttt 27454136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 27767938 - 27768029
Alignment:
Q  80 tttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    ||||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| ||||||||||||||| ||||    
T  27767938 tttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttg 27768029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 37915672 - 37915751
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  37915672 gggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 37915751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 49501681 - 49501597
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||| || |||||||       |||| |||  |||||||||||||||||||||||| |||||||||||||||    
T  49501681 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat 49501597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 49507746 - 49507662
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||| || |||||||       |||| |||  |||||||||||||||||||||||| |||||||||||||||    
T  49507746 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat 49507662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 20021231 - 20021317
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    |||| |||||||||| |  ||||||||||||||||||||| ||||| || ||| |||||||||||| |||| |||||||| ||||||    
T  20021231 ggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttg 20021317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 32951144 - 32951070
Alignment:
Q  95 ggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||| |||| ||||||||||||||||| ||||| || ||| |||||||||||| ||||||||||||| |||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttt 32951070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 34228878 - 34228816
Alignment:
Q  107 taagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  34228878 taagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 34228816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 41320631 - 41320693
Alignment:
Q  78 tatttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa 140  Q
    ||||||||||||||||||||||| |||| |||  |||||||||||||||||| || |||||||    
T  41320631 tatttagggggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaa 41320693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 5441285 - 5441370
Alignment:
Q  79 atttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  5441285 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 5441370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 5800049 - 5800098
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 5800098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 12913304 - 12913344
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  12913304 tattcaaaatcattcaaattttgaaggattgtttaataaat 12913344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 23464840 - 23464927
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaaga--ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||| |||||||||| | |||| ||||| |||||||||||  |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 23464927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 41725196 - 41725240
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaa 267  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa 41725240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 54341030 - 54341110
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  54341030 aggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 54341110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 56445471 - 56445431
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  56445471 tattcaaaatcattcaaatttcgaatgattgtttaataaat 56445431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 7007262 - 7007345
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||| |||| |||| |||||||||||||||||| ||| ||||| || ||| |||||| ||||| ||||||||||||| |||||    
T  7007262 gggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttt 7007345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 20021424 - 20021482
Alignment:
Q  243 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttt 302  Q
    ||||||||||  |||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  20021424 attcaaattttaaaggattgtttaataaattaga-ttttgctggattttatgggattttt 20021482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 25504955 - 25504873
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| | || ||| ||||||||||| | ||||| |||||||||| |||||||| ||||||||||||| |||||    
T  25504955 gggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 25504873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 55302732 - 55302815
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||| |||| ||||||||||||||||| |||| ||||| || ||| |||||| || || ||||||||||||| |||||    
T  55302732 gggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttt 55302815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 7249995 - 7249957
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  7249995 aaaagtcttgtgttattcaatcaagattcttagtcattt 7249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 41320735 - 41320769
Alignment:
Q  141 gtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||||||||||||||||||||||||||    
T  41320735 gtcttgtgttattcaatcaagattctttgtcattt 41320769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 28371004 - 28371072
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||  ||||||||||||||||||  || ||||| || ||||| |||||||||    
T  28371004 tattcaaaatcattcaaattttaaaggattgtttaataaat-tgaattttggtgaattttgtgggatttt 28371072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 39307476 - 39307311
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||| ||||||||||||||| |||| |||||       |||  ||||||||||||||||| |||| |||| ||       |||| ||| |||    
T  39307476 aaaagttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtat 39307377  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||| ||||||||||||||| || |||| |||||| |||  || |||||||| ||||| |||||||||    
T  39307376 tcataatcattcaaatttctaaagattatttaatgaat-tgagttttgatgaattttgtgggatttt 39307311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 50018322 - 50018371
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||||||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaat 50018371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 44646719 - 44646798
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||||| |||| ||||| ||| |||||||||||| ||||| || ||  |||| ||||||| |||||||||||||    
T  44646719 gggggtgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaaga 44646798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 49835126 - 49835055
Alignment:
Q  90 gtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 49835055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 54853787 - 54853708
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | ||||||| || ||||||||||| ||||| || | ||||| |||||||| |||||||||||||    
T  54853787 ggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaaga 54853708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 11090302 - 11090364
Alignment:
Q  108 aagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttg 169  Q
    |||||||||||||| ||||||| || |||| || |||||||| ||||||||||||| ||||||    
T  11090302 aagggattttaaaatattttttaattatgagaatgtcttgtggtattcaatcaagaatctttg 11090364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 12913133 - 12913195
Alignment:
Q  107 taagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattcttt 168  Q
    |||| |||||||||||||||||| ||  |||||| |||||||| ||||||||||||| |||||    
T  12913133 taagagattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactcttt 12913195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 20021327 - 20021365
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  20021327 aaaagttttgtggtattcaatcaagattctttgtcattt 20021365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 28847193 - 28847111
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaa 160  Q
    ||||||||| ||||||||||   |||||||| ||||||||||||| ||||| || ||  |||||||| ||| |||||||||||    
T  28847193 atttaggggatgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaa 28847111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 44771077 - 44771039
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  44771077 aaaagtcttgtgatattcaatcaagactctttgtcattt 44771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 28483864 - 28483949
Alignment:
Q  78 tatttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| ||||||| || | |||| || | |||||||||||| ||||| || ||| |||||||||| | |||||||||||||    
T  28483864 tatttaggggatgtattgaattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgaggtattcaatcaaga 28483949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 36728103 - 36728050
Alignment:
Q  112 gattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagatt 164  Q
    |||||||||||||||||| || ||| |||||||||||  |||||||||||||||    
T  36728103 gattttaaaagattttttaattatgaaaaagtcttgtagtattcaatcaagatt 36728050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 41725041 - 41725098
Alignment:
Q  113 attttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttg 169  Q
    ||||||||||||||||| || || |||| |||||||| ||||||||||||||| ||||    
T  41725041 attttaaaagattttttaattataaaaaagtcttgtgatattcaatcaagattttttg 41725098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 5799883 - 5799943
Alignment:
Q  102 gattttaagggattttaaaagattttttcatcatgaaaagtcttgtgttattcaatcaaga 162  Q
    ||||||| |||||||||||||| ||||| || ||||||||| ||||| |||| ||| ||||    
T  5799883 gattttatgggattttaaaagactttttaattatgaaaagttttgtggtattaaattaaga 5799943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 28100669 - 28100589
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||||||||   ||||| ||||| |||||||||| |||||| || || |||| |||||||| |||||||||||||    
T  28100669 gggggtgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaaga 28100589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 29649987 - 29649907
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| || | |||||||||||| ||||| || ||| |||||| ||||| |||||||||||||    
T  29649987 aggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaga 29649907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 53275727 - 53275779
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa 140  Q
    ||||||||||||| |||| ||||| ||||||||| || |||| ||||||||||    
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaa 53275779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 86 - 301
Target Start/End: Original strand, 102026 - 102244
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnng-- 183  Q
    ||||||||| ||||| |||| ||||||||||||||||| ||||| || |  |||||| ||||||||||||||||||||||||||||||||       |      
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttattaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagag 102125  T
Q  184 --tcgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttt 281  Q
      | ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  102126 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcaga-tttt 102224  T
Q  282 gatggattttatgggatttt 301  Q
    |||||||||| |||||||||    
T  102225 gatggattttgtgggatttt 102244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 96)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 47914251 - 47914416
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       ||||||||||||    
T  47914251 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatat 47914350  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  47914351 tcaaaatcattcaaatttcgaaggattgtttaataaataaga-ttttgatggattttgtgggatttt 47914416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 30440781 - 30440946
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||        ||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  30440781 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 30440880  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  30440881 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 30440946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 43581312 - 43581147
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       ||| ||  |||||||||||||||||||||||||||       |||||||| |||    
T  43581312 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 43581213  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  43581212 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 43581147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 47879153 - 47879318
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       ||||||||||||    
T  47879153 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatat 47879252  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| ||| |||||    
T  47879253 tcaaaatcattcaaatttaaaaggattgtttaataaatcaga-ttttgatggattttgtggaatttt 47879318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 973169 - 973334
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||        | ||||| |||    
T  973169 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtat 973268  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  973269 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 973334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 40996871 - 40996706
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||| ||||||||||||||||||||||||||||||       |||  |||||||||||||||||||||||||| |||       |||||||| |||    
T  40996871 aaaagtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtat 40996772  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||    
T  40996771 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtaggatttt 40996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 44343618 - 44343453
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||| ||||||||||||||||||||||||||       || ||||| |||    
T  44343618 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtat 44343519  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  44343518 ttaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 44343453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 7719482 - 7719317
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||| ||| ||||||||||       |||  ||||||||||||||||||||||||||||||        ||||||| |||    
T  7719482 aaaagtcttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtat 7719383  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  7719382 tcaaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttgatggattttgtgggatttt 7719317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 12893393 - 12893558
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  |||||||| |||||||||||||||||||||       ||||| || |||    
T  12893393 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtat 12893492  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||    
T  12893493 tcaaaatcattcaaatttcgaagaattgtttaataaatcaga-ttttgatggattttgtgagatttt 12893558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 18914957 - 18914792
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||| |||||||||| |||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  18914957 aaaagtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 18914858  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||||    
T  18914857 tcaaaatcattcaaatttcaaaggtttgtttaataaatcaga-ttttgatggattttgtgggatttt 18914792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 34695258 - 34695423
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||||||||||| |||||||||       ||   ||||||||||||||||||||||||||||||       ||| |||| |||    
T  34695258 aaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtat 34695357  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  34695358 tcaaaaccattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 34695423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 7718533 - 7718419
Alignment:
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7718533 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 7718435  T
Q  286 gattttatgggatttt 301  Q
    |||||| |||||||||    
T  7718434 gattttgtgggatttt 7718419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 302
Target Start/End: Complemental strand, 20275485 - 20275319
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgt--ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||| |||||||||||||||||| |||||||||       ||| |  ||||||||||||||||||||||||||||       ||||  || |||    
T  20275485 aaaagtcttgggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtat 20275386  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttt 302  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20275385 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggattttt 20275319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 34008997 - 34009163
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtc-tagtgata 233  Q
    |||||||||||||||||||||||||||| ||||||||||       |||  ||||||||||||||| ||||||||||||||       ||| ||||| ||    
T  34008997 aaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggta 34009096  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  34009097 ttcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtggaatttt 34009163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 31638860 - 31639015
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||| ||||||||||||||        | |||  |||||| ||||||||||||||||||||       |||||||| |||    
T  31638860 aaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtat 31638959  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31638960 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 81 - 291
Target Start/End: Original strand, 509577 - 509789
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttgtcatttnnnn 179  Q
    ||||||| |||||||||| | ||||||| |||||||||||||| ||||| || ||| |||||||||||| ||||||||||||| | ||||||||||        
T  509577 ttaggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactatttgtcattttaaa 509676  T
Q  180 nnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 277  Q
       |||  | ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||     
T  509677 aaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattgga- 509775  T
Q  278 ttttgatggatttt 291  Q
    ||||||||||||||    
T  509776 ttttgatggatttt 509789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 86 - 301
Target Start/End: Complemental strand, 39219651 - 39219434
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnn-g 183  Q
    |||||||||||||||  ||| ||||| ||||||||||| ||||| |||||||||| |||||||| ||||||||||||| |||||   ||||        |    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaag 39219552  T
Q  184 tc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttt 281  Q
    ||  ||| ||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||| | | ||||||||||||||||||| ||||    
T  39219551 tcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttg-atgattgtttaataaatcaga-tttt 39219454  T
Q  282 gatggattttatgggatttt 301  Q
    |||||||||| |||||||||    
T  39219453 gatggattttgtgggatttt 39219434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 29614986 - 29614821
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| |||||||    
T  29614986 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatat 29614887  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  29614886 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 29614821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 23101276 - 23101441
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  23101276 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 23101375  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  23101376 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 23101441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 43679491 - 43679564
Alignment:
Q  227 agtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 43679564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 3022904 - 3023069
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| | ||||||||||       ||| ||  |||||||||||||| | || |||||||       |||| ||| |||    
T  3022904 aaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtat 3023003  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  3023004 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 3023069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 9882458 - 9882293
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  9882458 aaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 9882359  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| |||||||||||||||  || |||||||||||||| |||||||||    
T  9882358 tcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatggattttgtgggatttt 9882293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 28342325 - 28342490
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||| ||||| || |||| ||       |||| ||| |||    
T  28342325 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtat 28342424  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  28342425 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 28342490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 39784077 - 39784242
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  39784077 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 39784176  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| ||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  39784177 tcaaaatcatttaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 39784242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 272
Target Start/End: Complemental strand, 44623548 - 44623361
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaagtc-ttgtgttattcaatcaagattctttgtcatttnnnnnnngt 184  Q
    ||||||||||||| | ||||| ||||||||||||| |||||||| ||||  | ||||| ||||| ||||||||||||| ||||||||||||       ||    
T  44623548 gggtgtattggattaagatttgaagggattttaaacgatttttttatca--agaagtctttgtgatattcaatcaagactctttgtcatttaaaaaaagt 44623451  T
Q  185 c--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |  |||||||| ||||||||||||| |||||||       |||| |||||||||||||||||||| ||||| || || ||||||||||||    
T  44623450 cttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaat 44623361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 44343715 - 44343629
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  44343715 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 44343629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 280
Target Start/End: Original strand, 727497 - 727643
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnng-tctagtgata 233  Q
    |||||||||||||||||||||||| ||||||||||||||       |||  ||| ||||||||||| |||||| |||||||         ||||||  ||    
T  727497 aaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagta 727596  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  727597 ttcaaaatcattcaaatttcaaaggattgtttaataaatcagatttt 727643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 8078280 - 8078369
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||  |||||||||||| ||||||||||||| |||||    
T  8078280 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttt 8078369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 12963679 - 12963844
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtgg--tattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||   ||||||||||||| | || || ||||       |||| ||| |||    
T  12963679 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtat 12963778  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  12963779 ccaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgatggattttgtgggatttt 12963844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 20275577 - 20275496
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatgaa-aagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||| |||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattcttt 20275496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 32143042 - 32142974
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  32143042 tattcaaaatcattcaaattttgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 32142974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 33382615 - 33382780
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||| |||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       ||||  || |||    
T  33382615 aaaagccttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtat 33382714  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| ||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  33382715 tcaaaatcatttaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 33382780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 301
Target Start/End: Complemental strand, 10676673 - 10676477
Alignment:
Q  107 taagggattttaaaagattttttcatcatgaaaag-tcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagac 203  Q
    ||||||||||||||||| ||||| || |||||||  ||||||| |||| |||||||| ||||||  ||||       |||  ||||||||||||||||||    
T  10676673 taagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagac 10676574  T
Q  204 tcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    | || |||||||       ||||  |  |||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||| |||||    
T  10676573 ttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-tttggatggattttatggaatttt 10676477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 19251517 - 19251672
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||| | | || |||||||       |||| ||| |||    
T  19251517 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtat 19251616  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  19251617 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 37327905 - 37328060
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || || ||||       |||| ||| |||    
T  37327905 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtat 37328004  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||||    
T  37328005 tcaaaatcattcaaatttcaaaggattgtttaataaat-tgaattttgatggatttt 37328060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 291
Target Start/End: Original strand, 29585434 - 29585647
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnn 177  Q
    ||||||||| | ||||| || | |||| || | |||||||||||||||||| || ||||||| || ||||| ||||||||||||||||||||||||||      
T  29585434 atttaggggatttattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattctttgtcatttta 29585533  T
Q  178 nnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 275  Q
         |||  | ||||||||||||| ||| || |||||||       ||||  || ||||||||||||||||||||| ||||||||||||||||| |  |    
T  29585534 aaaaagtcttgaggtattcaatcaaaact-tttatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataatttgg 29585632  T
Q  276 atttttgatggatttt 291  Q
    | ||||||||||||||    
T  29585633 a-ttttgatggatttt 29585647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 12893297 - 12893382
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||  ||||| |||||||||||| ||||||||||||| |||||    
T  12893297 gggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactcttt 12893382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 18915057 - 18914968
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||||||| |  | ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  18915057 tttagggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 18914968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 28035027 - 28034862
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtgg--tattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| | ||||||||||       ||| ||   ||||||||||||||| || |||||||       |||| ||| |||    
T  28035027 aaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 28034928  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||| ||||||||||| ||||||||||||||||||  || |||||||||||||| |||||||||    
T  28034927 tcaaaattattcaaatttcaaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 28034862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 30440685 - 30440770
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||| ||||||| ||||||||||||| |||||    
T  30440685 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttt 30440770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 973074 - 973158
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 973158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 301
Target Start/End: Original strand, 8675364 - 8675476
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||| ||| ||||||||||||||||||||||  || ||||||||||    
T  8675364 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattgga-ttttgatgga 8675462  T
Q  288 ttttatgggatttt 301  Q
    |||| |||||||||    
T  8675463 ttttgtgggatttt 8675476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 301
Target Start/End: Original strand, 10068498 - 10068610
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||| | || |||||||       |||| ||| ||||||||||||||||||||| ||||||||||||||||||| | | ||||||||||    
T  10068498 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatta-aattttgatgga 10068596  T
Q  288 ttttatgggatttt 301  Q
    |||| |||||||||    
T  10068597 ttttgtgggatttt 10068610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 301
Target Start/End: Original strand, 18838420 - 18838532
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || ||| |||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  18838420 ggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattgga-ttttgatgga 18838518  T
Q  288 ttttatgggatttt 301  Q
    |||| |||||||||    
T  18838519 ttttgtgggatttt 18838532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 40996974 - 40996882
Alignment:
Q  78 tatttagggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatgaaa-agtcttgtgttattcaatcaagattcttt 168  Q
    |||| |||||||||||||||||| |||| ||||||||||||||| | |||||| ||||||||| ||||||||| ||||||||||||| |||||    
T  40996974 tattaagggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactcttt 40996882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 291
Target Start/End: Complemental strand, 44122115 - 44121967
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaat 241  Q
    ||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||        ||| ||| ||||||||||    
T  44122115 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaat 44122016  T
Q  242 cattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||    
T  44122015 cattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 44121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 32143235 - 32143152
Alignment:
Q  87 ggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactcttt 32143152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 7113529 - 7113602
Alignment:
Q  227 agtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcaga-ttttgatagattttgtgggatttt 7113602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 12740351 - 12740515
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||||||||||||||||       ||| ||  ||||| |||||||| | || |||| ||       |||| ||| |||    
T  12740351 aaaagtcttgtggtattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtat 12740450  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| ||||||||||||||||||  |  ||||||| |||||| |||||||||    
T  12740451 tcaaaatcattcaaatttcaaaggattgtttaataaat--ggattttgatagattttgtgggatttt 12740515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 34695119 - 34695205
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||| |||| |||| ||||||||||||||||| ||||| || ||| |||||||||||| ||||||||||||| |||||    
T  34695119 agggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactcttt 34695205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 7993217 - 7993285
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||| | |||||||||    
T  7993217 tattcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatggattgtgtgggatttt 7993285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 34008903 - 34008960
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa 140  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  34008903 agggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaa 34008960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 168
Target Start/End: Original strand, 43679363 - 43679444
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 43679444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 17001245 - 17001108
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  ||||||||| |||||| || |||||||        | | ||| |||    
T  17001245 aaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtat 17001146  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17001145 tcaaaatcattcaaatttcgaaggattgtttaataaat 17001108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 40460874 - 40460774
Alignment:
Q  190 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 289  Q
    ||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||||    
T  40460874 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatggatt 40460776  T
Q  290 tt 291  Q
    ||    
T  40460775 tt 40460774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 43581406 - 43581323
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||| | ||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 43581323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 291
Target Start/End: Complemental strand, 46405600 - 46405498
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  || ||||||||||    
T  46405600 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattgga-ttttgatgga 46405502  T
Q  288 tttt 291  Q
    ||||    
T  46405501 tttt 46405498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 25805767 - 25805835
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||| |||||||||||||||||  || || ||||||||||| |||||||||    
T  25805767 tattcaaaatcattcaaatttcgtaggattgtttaataaat-tgaattatgatggattttgtgggatttt 25805835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 32883760 - 32883925
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||| || ||||||||||||| | ||||||||||       ||| ||  ||||||||| |||||| || |||||||       |||| ||| |||    
T  32883760 aaaagtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtat 32883859  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||| |||||  || |||||||||||||  |||||||||    
T  32883860 tcaaaatcattcaaatttcgaatgattgtttattaaattgga-ttttgatggatttcgtgggatttt 32883925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 47066770 - 47066819
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 47066819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 280
Target Start/End: Complemental strand, 3797279 - 3797134
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||| | || ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  3797279 aaaagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 3797180  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||| |||||| |||||| ||||||||||||||||||| |||||||    
T  3797179 tcaagatcattaaaattttgaaggattgtttaataaattagatttt 3797134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 281
Target Start/End: Complemental strand, 33892419 - 33892326
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttt 281  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| ||||||| |||||||  |||||||    
T  33892419 ggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggattttt 33892326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 31638766 - 31638849
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||| |||| |||| |||| |||||||||||| ||||| |||||| ||||||| |||| ||||||||||||| |||||    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttt 31638849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 39028075 - 39028230
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtgg--tattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| ||||||| ||||||||||||| ||||||||||||       ||| ||   ||||||||||||||| || |||||||       |||| ||| |||    
T  39028075 aaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttat 39028174  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||| |||||||| |||| |||||||||||||||  || ||||||||||||||    
T  39028175 tcaaaatcgttcaaattacgaaagattgtttaataaattgga-ttttgatggatttt 39028230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 44256935 - 44256851
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||| || |||||||       || | ||| ||||||||||||||||||||||||| |||||||||||||||    
T  44256935 ggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat 44256851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 28342229 - 28342315
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| ||||||||||||||| ||||    
T  28342229 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttg 28342315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 727405 - 727486
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||| |||| ||| |||||||||| || ||||| |||||| |||||||||| | ||||||||||||| |||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttt 727486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 23101174 - 23101259
Alignment:
Q  78 tatttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| ||||| |||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  23101174 tatttaggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 23101259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 29893033 - 29893097
Alignment:
Q  112 gattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||| || ||||||| |||||||| ||||||||||||| ||||||||||||    
T  29893033 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattt 29893097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 43187661 - 43187569
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaa-agtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||| |||||||||||   ||| |||| |||||||||||| ||||| || |||||| ||||||||| ||||||||||||| ||||||| ||||    
T  43187661 ggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactctttgtaattt 43187569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 9179871 - 9179995
Alignment:
Q  150 tattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattca 247  Q
    ||||||||||||||||||||||||||       ||  ||  ||||||||||||||||||| |||||||       |||| ||| ||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  248 aatttcgaaggattgtttaataaat 272  Q
    |||| ||||||||||||||||||||    
T  9179971 aattccgaaggattgtttaataaat 9179995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 21067764 - 21067843
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || | |||||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  21067764 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaga 21067843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 41827192 - 41827275
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||| | |||||||||| |  |||||| |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  41827192 tttaggagatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 41827275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 47879059 - 47879134
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    |||||||||| |||| |||| ||||||||||||||||| || || || ||| |||||||||||| |||||||||||    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaa 47879134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 47914157 - 47914232
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    |||||||||| |||| |||| ||||||||||||||||| || || || ||| |||||||||||| |||||||||||    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaa 47914232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 29615085 - 29615003
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||| |||||||||| | |||| || | |||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  29615085 ttaggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 29615003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 31401580 - 31401641
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa 140  Q
    |||||||||||||||||||||| |||| ||| | | ||||||||| ||||| ||||||||||    
T  31401580 atttagggggtgtattggatcatgattctaaagaactttaaaagacttttttatcatgaaaa 31401641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 43187482 - 43187414
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||| |||| ||||||||||||||  || |||||||| ||||| | |||||||    
T  43187482 tattcaaaatcattcaaattttgaagcattgtttaataaattgga-ttttgatgaattttgtcggatttt 43187414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 47066631 - 47066719
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa--gtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||| | |||| || ||||||| |||||| ||||| || |||||||  |||||||| ||||||||||| | ||||||||||||    
T  47066631 tgtattggattaggattctatgggatttaaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaaaactctttgtcattt 47066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 7719574 - 7719502
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    |||||||||||| |||| |||  |||||||||||| ||||| |||||| |||| ||||||| |||||||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaa 7719502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 7993023 - 7993103
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| ||  ||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  7993023 aggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 7993103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 19810874 - 19810914
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat 19810914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 175
Target Start/End: Original strand, 8078387 - 8078418
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcattt 175  Q
    ||||||||||||||||||||||||||||||||    
T  8078387 ttgtgttattcaatcaagattctttgtcattt 8078418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 18838271 - 18838350
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||| ||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  18838271 ggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaaga 18838350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 32883663 - 32883738
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatc 158  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || ||| |||||| ||||| |||||||||    
T  32883663 ggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatc 32883738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 33892574 - 33892483
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    ||||||||| |||||||||| | |||| || | |||||||||||| ||||| || ||| |||||| ||||| ||||||||||| ||| ||||    
T  33892574 atttaggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaaattttttg 33892483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 48117911 - 48117832
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| |  ||| || |||||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  48117911 ggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 48117832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 37972981 - 37972924
Alignment:
Q  243 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| ||||||||||  || ||||||||||||||  ||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattgga-ttttgatggattttgcgggatttt 37972924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 39027984 - 39028058
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||||||  | ||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  39027984 tgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 39028058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 48117815 - 48117777
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  48117815 aaaagtcttgtggtattcaatcaagactctttgtcattt 48117777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 3634213 - 3634290
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||||||   |||||  ||||||||||||||| ||||| || || |||| |||||||| |||||||||||||    
T  3634213 gggtgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaaga 3634290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 9179763 - 9179836
Alignment:
Q  82 tagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattc 154  Q
    ||||||||||||||||| |  ||| |||  |||||||||||| ||||| |||||| |||||||||||| |||||    
T  9179763 tagggggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtgatattc 9179836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 37327835 - 37327888
Alignment:
Q  110 gggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  37327835 gggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 37327888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 447858 - 447894
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaat 268  Q
    |||| |||||||||||||||||||| |||||||||||    
T  447858 tatttaaaatcattcaaatttcgaatgattgtttaat 447894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 7113341 - 7113430
Alignment:
Q  83 agggggtgtattggatcac---gattttaagggattttaaaaga-ttttttcatcatga-aaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||||    |||| ||||||||||||||||| |||||| ||||||| ||||| || || ||||||||||||| |||||    
T  7113341 agggggtgtattggatcatcatgattctaagggattttaaaagactttttttatcatgacaaagtatt-tggtattcaatcaagactcttt 7113430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 41827390 - 41827445
Alignment:
Q  243 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatt 299  Q
    ||||||| || |||||||||||||||||||  || |||||||||||||| |||||||    
T  41827390 attcaaaatttgaaggattgtttaataaattgga-ttttgatggattttgtgggatt 41827445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 6197700 - 6197535
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  6197700 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 6197601  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  6197600 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 6197535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 1391607 - 1391772
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||||||||||| |||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  1391607 aaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 1391706  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  1391707 tcaaaatcattcaaatttggaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 1391772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 2300960 - 2300795
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  |||||||||||||||||||||| |||||||       ||||| || |||    
T  2300960 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtat 2300861  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  2300860 tgaaaatcattcaaatttcgaaggattgtttaataaataaga-ttttgatggattttgtgggatttt 2300795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 28002648 - 28002803
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgt--ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||| |||||||||||||||| ||||||||||       ||| |  ||||||||||||||||||||||||||||       ||||||||||||    
T  28002648 aaaagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatat 28002747  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  28002748 tcaaaatcattcaaatttggaaggattgtttaataaatcaga-ttttgatggatttt 28002803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 301
Target Start/End: Original strand, 29076582 - 29076747
Alignment:
Q  138 aaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatat 234  Q
    ||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||| ||| ||||||||||||        |||||||  |||    
T  29076582 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtat 29076681  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  29076682 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttataggatttt 29076747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 301
Target Start/End: Original strand, 29111555 - 29111721
Alignment:
Q  138 aaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtgata 233  Q
    ||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||| ||| ||||||||||||         |||||||  ||    
T  29111555 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagta 29111654  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  29111655 ttcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttataggatttt 29111721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 7051828 - 7051993
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||| | ||||||||||||||||||||       |||  ||||||| |||||||||||||| |||||||       |||  |||||||    
T  7051828 aaaagtcttgtggtatacgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatat 7051927  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| | |||||||    
T  7051928 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtaggatttt 7051993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 31895679 - 31895844
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  31895679 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 31895778  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  31895779 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 31895844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 2301061 - 2300971
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  2301061 atttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 2300971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 301
Target Start/End: Complemental strand, 34759332 - 34759107
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagatttttt-catcatgaaaa--gtcttgtgttattcaatcaagattctttgtcatttnn 177  Q
    |||||||||||||||||| | |||| || | |||||||||||| ||||| || | | ||||  |||||||| ||||||||||||| ||||||||||||      
T  34759332 ttagggggtgtattggattaggattctatgagattttaaaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttta 34759233  T
Q  178 nnnnn-gtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 274  Q
          ||| ||  |||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||      
T  34759232 aaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattg 34759133  T
Q  275 gatttttgatggattttatgggatttt 301  Q
    || |||||||||||||| |||||||||    
T  34759132 ga-ttttgatggattttgtgggatttt 34759107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 34773392 - 34773557
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||        ||| ||| |||    
T  34773392 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtat 34773491  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  34773492 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 34773557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 14262655 - 14262490
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||| | || |||| ||       |||| ||| |||    
T  14262655 aaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtat 14262556  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| ||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  14262555 tcaaaatcatttaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 14262490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 29076484 - 29076570
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| |||| |||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  29076484 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactcttt 29076570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 29111457 - 29111543
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| |||| |||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  29111457 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactcttt 29111543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 6197796 - 6197711
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||| | ||||| |||||| ||||||| |||| ||||||||||||| |||||    
T  6197796 gggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactcttt 6197711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 272
Target Start/End: Complemental strand, 30385335 - 30385142
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagatttttt-catcatgaaaa--gtcttgtgttattcaatcaagattctttgtcatttnnnnn 180  Q
    |||| |||||||||| | |||| || | |||||||||||||||||| || | | ||||  |||||||| ||||||||||||| ||||||||||||         
T  30385335 ggggatgtattggattaggattctatgagattttaaaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 30385236  T
Q  181 nngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
      ||  ||  |||||||||||| | | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  30385235 aagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 30385142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 7497110 - 7497214
Alignment:
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    ||||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||| ||||||||||||  || ||||||||    
T  7497110 gtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattgga-ttttgatg 7497208  T
Q  286 gatttt 291  Q
    ||||||    
T  7497209 gatttt 7497214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 1391513 - 1391596
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||| |||||||||| || ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 1391596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 7051728 - 7051818
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    |||||||||||| || ||| | |||| |||| |||||||||||| ||||| |||||| |||||||||||| ||||||||||||| ||||||    
T  7051728 tttagggggtgtgtttgattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttg 7051818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 656957 - 657065
Alignment:
Q  145 tgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatc 242  Q
    ||||||||||||||||||||||||| |||||       |||  ||||||||||||||||||||||||||||||       |||||||| ||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  243 attcaaattt 252  Q
    ||||||||||    
T  657056 attcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 31067573 - 31067613
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31067573 tattcaaaatcattcaaatttcgaaggattgtttaataaat 31067613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 34773295 - 34773375
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  34773295 aggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 34773375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 31895583 - 31895662
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  31895583 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 31895662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 14262751 - 14262665
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||| ||||||| ||||||||||||||| ||||    
T  14262751 ggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttg 14262665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 4200541 - 4200494
Alignment:
Q  243 attcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 4200494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 3848290 - 3848330
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  3848290 tattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 7497000 - 7497084
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||| |||||||||| |  ||| || | |||||||||||||||||| || ||| |||||| || || |||||||||||||    
T  7497000 atttaggggatgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattcaatcaaga 7497084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 16269676 - 16269841
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  16269676 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 16269775  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  16269776 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 16269841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 24776340 - 24776505
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  24776340 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 24776439  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  24776440 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 24776505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 20605221 - 20605386
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  20605221 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 20605320  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20605321 tcaaaatcattaaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 20605386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 31170849 - 31170684
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  31170849 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 31170750  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||    
T  31170749 tcaaaatcattcaaatttccaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 31170684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 12407365 - 12407530
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||| ||||||||||||||||       |||||||| |||    
T  12407365 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtat 12407464  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  12407465 tcaaaatcattcaaattttgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 12407530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 14198802 - 14198637
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||| ||||||||||||||       |||  ||||||||||||||||||||||||||||||       ||| |||| |||    
T  14198802 aaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtat 14198703  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  14198702 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 14198637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 1789427 - 1789592
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgt--ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       ||| |  | ||||||||||| ||||||||||||||       |||||||| |||    
T  1789427 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtat 1789526  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  1789527 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 1789592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 5093272 - 5093107
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  |||||||||||||||||| |||||||||||       |||||||  |||    
T  5093272 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtat 5093173  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  5093172 tcaaaatcattcaaattttgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 5093107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 43847631 - 43847796
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||  |||    
T  43847631 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtat 43847730  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| |||||    
T  43847731 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-atttgatggattttgtggaatttt 43847796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 44765760 - 44765925
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||| ||||||||||||||||       |||||||| |||    
T  44765760 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtat 44765859  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||    
T  44765860 tcaaaatcattcaaatttcgaaagattgtttaataaataaga-ttttgatggattttgtgggatttt 44765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 35317047 - 35317212
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtgg--tattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||||||||||||||||||||||||||||||       ||| ||   ||||||||||||||||||||||||||       |||||||| |||    
T  35317047 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 35317146  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  35317147 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtggaatttt 35317212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 305690 - 305525
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||| ||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  305690 aaaagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 305591  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||| || ||||||    
T  305590 tcaaaatcattcaaattttgaatgattgtttaataaatcaga-tttcgatggattttgtgagatttt 305525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 83 - 301
Target Start/End: Original strand, 9120056 - 9120276
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaag-tcttgtgttattcaatcaagattctttgtcatttnnnnnn 181  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||  || |||| ||||||||||||| |||||   ||||          
T  9120056 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaattttaaaaa 9120155  T
Q  182 ngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 279  Q
     |||  ||| ||||||||||||| ||||||||||||        |||||||||||||||||||||||| ||||  |||||||||||||||||| ||| ||    
T  9120156 agtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattaga-tt 9120254  T
Q  280 ttgatggattttatgggatttt 301  Q
    |||||||||||| |||||||||    
T  9120255 ttgatggattttgtgggatttt 9120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 32125235 - 32125403
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaat---cacttnnnnnnngtctagtga 231  Q
    |||||||||||||||||||||||| ||||||||||||||       |||  |||||||||||||||||||||||||   || ||       ||| ||||     
T  32125235 aaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtgg 32125334  T
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  32125335 tattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 32125403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 22551988 - 22551823
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||| ||||||||||       |||||||| |||    
T  22551988 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtat 22551889  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||| |||||||||||||| ||||||||| ||||| | | |||||||||||||| |||||||||    
T  22551888 tcaaaattattcaaatttcgaatgattgtttattaaatta-aattttgatggattttgtgggatttt 22551823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 28844540 - 28844705
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  28844540 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 28844639  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||    
T  28844640 tcaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgatggattttgtggaatttt 28844705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 33135608 - 33135773
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  33135608 aaaagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtat 33135707  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  33135708 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 33135773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 291
Target Start/End: Complemental strand, 28740508 - 28740353
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  28740508 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 28740409  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  28740408 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 28740353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 10657391 - 10657556
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| |||||||||||||| |||||||||||       ||  ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  10657391 aaaagtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 10657490  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| |||||||||||||||  || |||||||||||||| |||||||||    
T  10657491 tcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatggattttgtgggatttt 10657556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 7026589 - 7026744
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  7026589 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 7026688  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  7026689 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 7026744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 31170947 - 31170860
Alignment:
Q  82 tagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  31170947 tagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactcttt 31170860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 12407268 - 12407354
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| |||| |||| |||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||    
T  12407268 agggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttt 12407354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 22552088 - 22552003
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagatt 164  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||    
T  22552088 tttagtgggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagatt 22552003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 24776244 - 24776329
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  24776244 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 24776329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 20605042 - 20605126
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactcttt 20605126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 280
Target Start/End: Complemental strand, 26601425 - 26601280
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| |||||||||| |||||||| |||||||||||        ||| ||  |||||||||||||||||||||||||||       |||  ||| |||    
T  26601425 aaaagttttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtat 26601326  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||||||||||||||||||||| | |||||||||||||||||||||    
T  26601325 tcaaaatcattcaaatttcgaatgtttgtttaataaatcagatttt 26601280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 3574885 - 3574969
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3574885 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 3574969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 305792 - 305702
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||||||| |||| |||| |||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  305792 tttagggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 305702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 14198894 - 14198812
Alignment:
Q  87 ggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 14198812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 16269581 - 16269665
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| || ||| |||||||||||| ||||||||||||| |||||    
T  16269581 ggggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactcttt 16269665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 26788859 - 26788936
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 26788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 44765667 - 44765741
Alignment:
Q  87 ggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    |||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 44765741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 1789331 - 1789408
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaa 160  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  1789331 gggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaa 1789408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 18177349 - 18177417
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||| |||||||||    
T  18177349 tattcaaaatcattcaaatttcgaaggattgtttaattaattgga-ttttgatggattttgtgggatttt 18177417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 25288241 - 25288309
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||| |||||||||    
T  25288241 tattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgaattttgtgggatttt 25288309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 35316947 - 35317036
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||| ||||||||||| |||| |||| ||||||||||||||| | ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  35316947 tttaaggggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 35317036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 378868 - 378947
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||||| |||| ||||||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  378868 ggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 378947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 28844438 - 28844523
Alignment:
Q  78 tatttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  28844438 tatttaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 28844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 173
Target Start/End: Original strand, 43078569 - 43078654
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcat 173  Q
    |||||||||| | |||| || |||||||||||||| ||||| || ||||||| |||||||| ||||||||||||||| ||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaagattttttgtcat 43078654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 20605137 - 20605209
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactctt 207  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||    
T  20605137 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 20605209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 32125152 - 32125224
Alignment:
Q  97 atcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||| |||||||||||||||||||||| ||||| || ||| |||||||||||| ||||||||||||| |||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttt 32125224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 10125421 - 10125378
Alignment:
Q  229 tgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  10125421 tgatattcaaaatcattcaaatttcaaaggattgtttaataaat 10125378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 19144907 - 19144990
Alignment:
Q  78 tatttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaa 160  Q
    |||| |||||||||||||||  | |||| ||||||||||||||| ||||||| |||||  |||||||||||| |||||||||||    
T  19144907 tattaagggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaa 19144990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 215450 - 215320
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||| ||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  215450 aaaagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtat 215351  T
Q  235 tcaaaatcattcaaatttcgaaggattgttt 265  Q
    ||||||||||||||| ||| |||||||||||    
T  215350 tcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 13833592 - 13833510
Alignment:
Q  190 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||| || |||||||       ||||  || ||||||||||||||||||||| |||||||||||||||||||    
T  13833592 tattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaat 13833510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 379019 - 379059
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  379019 tattcaaaatcattcaaattttgaaggattgtttaataaat 379059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 26788673 - 26788752
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  26788673 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 26788752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 26601522 - 26601444
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatca-tgaaaagtcttgtgttattcaatcaa 160  Q
    |||||||||||||||||| | || ||| ||||||||||||| ||||| || | | |||||||||||| |||||||||||    
T  26601522 agggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaa 26601444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 6224684 - 6224635
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||| ||| |||||||||| ||||||||||||||||||| ||||||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaat 6224635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 18176553 - 18176476
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| || | ||||| |||||||||||||||||||||| || ||  |||| ||||||| |||||||||||||    
T  18176553 gggtgtattgaattaagatttgaagggattttaaaagattttttaataataaaaaaatcttgtggtattcaatcaaga 18176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 43078653 - 43078713
Alignment:
Q  240 atcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||| |||||||||||||||  || |||| ||||||||| |||||||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattgga-ttttcatggattttgtgggatttt 43078713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 215551 - 215467
Alignment:
Q  80 tttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    ||||||||| |||||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  215551 tttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 215467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 3463745 - 3463812
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||| ||| |||| |||||||||||| |||| ||||||||||||||||||  || ||||||||||||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattgga-ttttgatggatttt 3463812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 28740598 - 28740527
Alignment:
Q  90 gtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 28740527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 7026487 - 7026572
Alignment:
Q  80 tttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa--gtcttgtgttattcaatcaaga 162  Q
    ||||||||| |||||||||| | |||| || | |||||||||||| ||||| || |||||||  |||||||| |||||||||||||    
T  7026487 tttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaaga 7026572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 13833746 - 13833664
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||| |||||||||| | |||| || | ||||||||||||| |||| || ||| |||||| ||||| |||||||||||||    
T  13833746 ttaggggatgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaaga 13833664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 26788769 - 26788807
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  26788769 aaaagtcttgtggtattcaatcaagactctttgtcattt 26788807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||| ||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 15256 - 15091
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       ||| ||  |||||||||||||||||||||||||||       |||||||| |||    
T  15256 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 15157  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  15156 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 15091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 15349 - 15267
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||   |||||||| ||||| |||||| |||| ||||||| ||||||||||||| |||||    
T  15349 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttt 15267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 15899 - 15734
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       ||| ||  |||||||||||||||||||||||||||       |||||||| |||    
T  15899 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 15800  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  15799 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 15734  T

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Target: scaffold0365; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 15992 - 15910
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||   |||||||| ||||| |||||| |||| ||||||| ||||||||||||| |||||    
T  15992 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttt 15910  T

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Target: chr3 (Bit Score: 94; Significance: 7e-46; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 3999868 - 3999703
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||        ||||||| |||    
T  3999868 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtat 3999769  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  3999768 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 3999703  T

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Target: chr3; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 19253810 - 19253975
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  19253810 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 19253909  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  19253910 tcaaaatcattcaaatttcgaaggattgtttaataaataaga-ttttgatggattttgtgggatttt 19253975  T

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Target: chr3; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 20498192 - 20498357
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  20498192 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 20498291  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20498292 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 20498357  T

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Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 996309 - 996144
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||| ||||||       |||  ||||||||||||||||| ||||||||||||       |||||||| |||    
T  996309 aaaagtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtat 996210  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  996209 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 996144  T

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Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 10139369 - 10139204
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||||||||||| || ||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  10139369 aaaagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 10139270  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  10139269 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 10139204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 37820700 - 37820535
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||        ||  ||||||||||||||||| ||||||||||||       |||||||| |||    
T  37820700 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtat 37820601  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  37820600 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 37820535  T

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Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 1440176 - 1440010
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnng---tcgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||||||           | ||||||||||||||||||||||||||||||       |||||||| ||    
T  1440176 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 1440077  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  1440076 ttcaaaatcattcaaatttccaaggattgtttaataaatcaga-ttttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 33808022 - 33807856
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    ||||||||||||||||||||| |||||||||||||||||       |||  ||||||||||||||||||||||||||||||        |||||||| ||    
T  33808022 aaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggta 33807923  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33807922 ttcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 33807856  T

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Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 29449081 - 29448916
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||||||||||| |||||||||       |||  ||| ||||||||||||||||| ||||||||       |||||||| |||    
T  29449081 aaaagtcttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtat 29448982  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  29448981 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 29448916  T

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Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 35337718 - 35337883
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||||||||||| |||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||    
T  35337718 aaaagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 35337817  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  35337818 tcaaaaaaattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 35337883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 85 - 301
Target Start/End: Complemental strand, 33996809 - 33996599
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngt 184  Q
    |||||||||||||||| |||| ||||||||||| ||||| ||||| ||||||||||         ||||||||||||||||||||||||||       ||    
T  33996809 ggggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaag-------tattcaatcaagattctttgtcatttaaaaaaagt 33996717  T
Q  185 c--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttg 282  Q
    |  ||||||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33996716 cttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttg 33996618  T
Q  283 atggattttatgggatttt 301  Q
    |||||||||  ||||||||    
T  33996617 atggattttgagggatttt 33996599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 302
Target Start/End: Complemental strand, 44762260 - 44762094
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       ||| ||  |||||||||||||||||||||||||||       |||||||| |||    
T  44762260 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 44762161  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttt 302  Q
    | ||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  44762160 ttaaaattattcaagtttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggattttt 44762094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 3206377 - 3206263
Alignment:
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3206377 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 3206279  T
Q  286 gattttatgggatttt 301  Q
    |||||| |||||||||    
T  3206278 gattttgtgggatttt 3206263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 6589547 - 6589712
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||| |||| |||||||||       |||  ||||||||||||||||||||||||||| ||       |||||||| |||    
T  6589547 aaaagtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtat 6589646  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||||||    
T  6589647 tcaaaatcattcaaatttcgaagaattatttaataaatcaga-ttttgatggattttgtgggatttt 6589712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 25418349 - 25418514
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||| ||||||||||        ||||| | |||    
T  25418349 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtat 25418448  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  25418449 tcaaaatcattcaaatttgaaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 25418514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 40246827 - 40246992
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| ||||||||||||||||||||||||||||||||||       ||   ||||||||||||||||||| ||||||| ||       |||||||| |||    
T  40246827 aaaaatcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtat 40246926  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  40246927 tcaaaatcattcaaatttggaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 40246992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 54625575 - 54625740
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||| |||| |||||||||        || ||  |||||||||||||||||||||||||||       |||||||| |||    
T  54625575 aaaagtcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 54625674  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  54625675 tcaaaattattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 54625740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 301
Target Start/End: Original strand, 17946248 - 17946436
Alignment:
Q  115 tttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatc 211  Q
    ||||||||| ||||| || ||||||| |||||||| ||||||||||||||||||||||||||       ||| ||  |||||||||||||||| || |||    
T  17946248 tttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 17946347  T
Q  212 acttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| |||||||||    
T  17946348 acttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 17946436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 29029989 - 29030153
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||| |||| ||||||||||||       |||  ||||||||||||||||||||||||||||||       |||| ||| |||    
T  29029989 aaaagtcttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtat 29030087  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  29030088 tcaaaatcattcaaattttgaaggattgtttaataaatcaga-ttttgatggattttgtggaatttt 29030153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 51699702 - 51699538
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||| |||||||||||||||||||||||||||        ||  ||||||||||||||||||||||||||||||        ||||||| |||    
T  51699702 aaaagtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtat 51699604  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||| |||||||||    
T  51699603 tcaaaatcattcaaatttcgaaggattggttaataaataaga-ttttgatgaattttgtgggatttt 51699538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 22057744 - 22057910
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnng---tcgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||||||           | ||||||||| |||||||||||| |||||||        ||||||| ||    
T  22057744 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggta 22057843  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    || ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  22057844 tttaaaatcattcaaatttcgatggattgtttaataaatcaga-ttttgatggattttgtgggatttt 22057910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 52114511 - 52114677
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||| ||||||||||||||| ||||||||||||||||||       |||  ||||||||||||||||||| ||||||||||        |||||||| ||    
T  52114511 aaaaatcttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggta 52114610  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||| ||| |||||    
T  52114611 ttcaaaataattcaaatttcgcaggattgtttaataaatcaga-ttttgatagattttgtggaatttt 52114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 301
Target Start/End: Complemental strand, 53929336 - 53929186
Alignment:
Q  152 ttcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaa 249  Q
    ||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  250 tttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    | ||||| ||||||||||||||| ||| |||||||||||||| | |||||||    
T  53929236 tatcgaacgattgtttaataaataaga-ttttgatggattttgtaggatttt 53929186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 44906736 - 44906571
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  44906736 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 44906637  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||| ||||| |||||||||    
T  44906636 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgaattttgtgggatttt 44906571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 52618188 - 52618023
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||| |||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  52618188 aaaagtcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 52618089  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  52618088 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 52618023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 291
Target Start/End: Complemental strand, 10728918 - 10728709
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnn 182  Q
    |||| |||||||||| |  ||| || || ||||||||||| ||||| || ||||||| |||||||| ||||||||||||| ||||||||||||           
T  10728918 ggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 10728819  T
Q  183 gtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||| ||  |||||||||||||||| || |||||||       |||| ||| |||| |||||||||||||||| |||||||||||||||||||  || |||    
T  10728818 gtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattgga-ttt 10728720  T
Q  281 tgatggatttt 291  Q
    |||||||||||    
T  10728719 tgatggatttt 10728709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 34484253 - 34484088
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       || | ||| |||    
T  34484253 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtat 34484154  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  34484153 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 34484088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 36674353 - 36674188
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  36674353 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 36674254  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||||    
T  36674253 tcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 36674188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 40897127 - 40897292
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| |||||| |||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       ||||  || |||    
T  40897127 aaaagtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtat 40897226  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  40897227 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 40897292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 23753609 - 23753472
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||||||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  23753609 aaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 23753510  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23753509 tcaaaatcattcaaatttcgaaggattgtttaataaat 23753472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 188 - 301
Target Start/End: Complemental strand, 51737896 - 51737784
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  51737896 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 51737798  T
Q  288 ttttatgggatttt 301  Q
    |||| |||||||||    
T  51737797 ttttgtgggatttt 51737784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 996405 - 996319
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  996405 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 996319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 301
Target Start/End: Original strand, 52810312 - 52810526
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgt 187  Q
    |||||||||| | |||| || |||||||||||||| ||||| |  ||||||| || ||||| ||||||||||||| ||||||||||||       ||  |    
T  52810312 tgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactctttgtcattttaaaaaagtttt 52810411  T
Q  188 g--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    |  |||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| ||| |||||||||||||||  || ||||||||    
T  52810412 gaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaat-tgaattttgatg 52810510  T
Q  286 gattttatgggatttt 301  Q
    |||||| |||||||||    
T  52810511 gattttgtgggatttt 52810526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 19253710 - 19253799
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||| |||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  19253710 tttagggggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 19253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 3206514 - 3206430
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 3206430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 301
Target Start/End: Complemental strand, 6035223 - 6035111
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||    
T  6035223 ggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattaga-ttttgatgga 6035125  T
Q  288 ttttatgggatttt 301  Q
    |||| |||||||||    
T  6035124 ttttgtgggatttt 6035111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 27899379 - 27899472
Alignment:
Q  187 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||||||||||||||||||||  ||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27899379 tggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 27899472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 301
Target Start/End: Original strand, 48379193 - 48379305
Alignment:
Q  188 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 287  Q
    ||||||||||| ||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  48379193 ggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatgga 48379291  T
Q  288 ttttatgggatttt 301  Q
    |||| |||||||||    
T  48379292 ttttgtgggatttt 48379305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 10660518 - 10660673
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       || | ||| |||    
T  10660518 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtat 10660617  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  10660618 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 10660673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 12734159 - 12734080
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||    
T  12734159 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 12734080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 18749683 - 18749760
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 18749760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 11431509 - 11431674
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| |||||||| |||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  11431509 aaaagtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 11431608  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| ||||||||||||||||||||||||||  || ||||| |||||||| |||||||||    
T  11431609 tcaaaatcatttaaatttcgaaggattgtttaataaattgga-ttttggtggattttgtgggatttt 11431674  T

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Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 20498097 - 20498181
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  20498097 gggggtgtattggatcatgattctaagggattttaaaagacttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttt 20498181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 26107260 - 26107409
Alignment:
Q  153 tcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaat 250  Q
    |||||||||||||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||    
T  26107260 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaat 26107359  T
Q  251 ttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||  || |||||||||||||| || ||||||    
T  26107360 ttcgaaggattgtttaataaattgga-ttttgatggattttgtgtgatttt 26107409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 10139468 - 10139380
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| |||| ||||||||||||||| | ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  10139468 ttagggggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 10139380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 52079999 - 52080055
Alignment:
Q  224 tctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt 52080055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 32580247 - 32580324
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||  ||||||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgagggatttt 32580324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 39842619 - 39842562
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagatttt 39842562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 54628924 - 54628992
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| |||||||||    
T  54628924 tattcaaaatcattcaaatttcaaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 54628992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 291
Target Start/End: Original strand, 39038030 - 39038178
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaat 241  Q
    ||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| ||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  242 cattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||||||||||| ||||||||||||||  || ||||||||||||||    
T  39038130 cattcaaatttcgaagaattgtttaataaattgga-ttttgatggatttt 39038178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 52114418 - 52114494
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatga-aaagtcttgtgttattcaatcaa 160  Q
    |||||||| ||||||| |||| ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  52114418 ggggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa 52114494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 37820794 - 37820711
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||| |||||||| | |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  37820794 gggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 37820711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 5825142 - 5825211
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttt 302  Q
    ||||||||||||||||||||| |||||||||||||||||||  || ||||||| |||||| ||||||||||    
T  5825142 tattcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatagattttgtgggattttt 5825211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 50903466 - 50903298
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgt--ggtattcaatcaagactcttaatcactt---nnnnnnngtctagtga 231  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| |  ||||||||||||||||| || |||| ||          |||| |||     
T  50903466 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtgg 50903367  T
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||  |||||||||||||||||||  || |||||||||||||| |||||||||    
T  50903366 tattcaaaatcattcaaattaagaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 50903298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 291
Target Start/End: Original strand, 55235261 - 55235322
Alignment:
Q  229 tgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||||||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||    
T  55235261 tgatattcaaaatcattcaaatttcgaaagattgtttaataaat-tggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 31646410 - 31646342
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||| ||||||||||| |||  || |||||||||||||| |||||||||    
T  31646410 tattcaaaatcattcaaatttcgaaagattgtttaatgaattgga-ttttgatggattttgtgggatttt 31646342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 37454851 - 37454981
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtgg--tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaat 241  Q
    ||||| ||||||||||||||||||||||||||       ||| ||   ||||||||||||||| || |||| ||       |||| ||| ||||||||||    
T  37454851 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 37454950  T
Q  242 cattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||| |||||||||||||||    
T  37454951 cattcaaatttcgaatgattgtttaataaat 37454981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 40246731 - 40246816
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| |||| |||||||||| | ||||| ||| || |||||||||||| ||||||||||||| |||||    
T  40246731 gggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactcttt 40246816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 51699802 - 51699713
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||||||| |||| |||  |||||||||||||||||| |||| | |||| | ||||| ||||||||||||| |||||    
T  51699802 tttagggggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttt 51699713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 300
Target Start/End: Original strand, 20832975 - 20833139
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||| ||| |||| |||||||| ||||||||||||       ||| ||  |||||||||||||| | || |||||||       |||| ||| |||    
T  20832975 aaaagtctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtat 20833074  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattt 300  Q
    |||||||||||||||||  |||||||||||||||||||  || |||||||||||||| || |||||    
T  20833075 tcaaaatcattcaaattcggaaggattgtttaataaattgga-ttttgatggattttgtgagattt 20833139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 6589449 - 6589536
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||| |||||||||||| |||| ||||||| ||||||||| |||||| |||||| |||||||||||| |||||||| |||| |||||    
T  6589449 aggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactcttt 6589536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 22057651 - 22057726
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatc 158  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||| ||||| |||||||||    
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatc 22057726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 29449189 - 29449102
Alignment:
Q  75 tgttattta-gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||||||| ||||||||||| ||||| |||| ||||||||||||||||| ||||| || ||| |||| ||||||| |||||||||||    
T  29449189 tgttatttaagggggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaa 29449102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 35337620 - 35337707
Alignment:
Q  83 agggggtgtattgga-tcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||| || ||| |||| ||||||||||||||||| ||||| || ||| |||||||||||| ||||||||||||| |||||    
T  35337620 agggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactcttt 35337707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 19552235 - 19552153
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaagatt 164  Q
    ||||||||||||||||   |||||||| ||||||||||||||||||| ||  |  |||||||||||| |||||||||||||||    
T  19552235 agggggtgtattggattgagattttaaaggattttaaaagatttttttattttataaaagtcttgtggtattcaatcaagatt 19552153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 25418248 - 25418330
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaa 160  Q
    ||||||||||| |||||||||| |||| |||| |||||||||| ||||||| ||||||||||  | ||||| |||||||||||    
T  25418248 atttagggggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaa 25418330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 539539 - 539490
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 36674455 - 36674370
Alignment:
Q  79 atttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  36674455 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 36674370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 38772258 - 38772351
Alignment:
Q  78 tatttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgt 170  Q
    ||||||| ||||||||| ||| | |||| | || |||||||||||| |||||  | ||||||| |||||||| |||||||||||||||||||||    
T  38772258 tatttagagggtgtattagattaggattctgagagattttaaaagactttttatttatgaaaaagtcttgtggtattcaatcaagattctttgt 38772351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 10660417 - 10660501
Alignment:
Q  80 tttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  10660417 tttagggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 10660501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 20832881 - 20832969
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttgt 170  Q
    ||||| |||||||||| | |||| || | |||||||||||||||||| || ||| |||||| ||||| ||||||||||||||| |||||    
T  20832881 aggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttttgt 20832969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 33808123 - 33808033
Alignment:
Q  82 tagggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtctt---gtgttattcaatcaagattcttt 168  Q
    |||||||||||||| |||| |||| ||||||||||||||||| ||||| |||||  |||||||||   ||| ||||||||||| |||||||    
T  33808123 tagggggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattcttt 33808033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 16010750 - 16010805
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaa 139  Q
    |||||||||||||||||  ||| ||||||||||||||||| ||||| |||||||||    
T  16010750 gggggtgtattggatcataattctaagggattttaaaagacttttttatcatgaaa 16010805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 2024116 - 2024186
Alignment:
Q  106 ttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcattt 175  Q
    ||||| |||||||||| ||||||| || ||||||| |||||||| ||||||||||||| | ||||||||||    
T  2024116 ttaagagattttaaaatatttttttattatgaaaaagtcttgtggtattcaatcaagactatttgtcattt 2024186  T

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Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 29029898 - 29029972
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||||| |||| ||||||||||||||||| ||||  |||||| |||| | ||||| |||||||||||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaaga 29029972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 39842751 - 39842669
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||| ||||| |||||||||||||    
T  39842751 ttaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaga 39842669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 44762333 - 44762271
Alignment:
Q  107 taagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| ||||| || ||||||| |||||||| ||||||||||||| |||||    
T  44762333 taagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttt 44762271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 539705 - 539608
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    ||||| ||| |||||||||| | | || |||| |||||||||||||||||| || ||| ||||| |||||| ||||||||||| | ||||||| ||||    
T  539705 atttaagggatgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactctttgtaattt 539608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 10216229 - 10216168
Alignment:
Q  102 gattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||||||||||||||| || ||  |||||||||||| |||||||||||||    
T  10216229 gatttaaagggattttaaaagatttttttattataaaaaagtcttgtggtattcaatcaaga 10216168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 40897025 - 40897117
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg--aaaagtcttgtgttattcaatcaagattctttg 169  Q
    ||||||||| |||||||||| | |||| || |||||||||||| | ||||| || |||  |||| ||||||| ||||||||||||||| ||||    
T  40897025 atttaggggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttg 40897117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 54625481 - 54625534
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaa 139  Q
    ||||||||||||||| |||| |||| ||||||| |||||||||| |||||||||    
T  54625481 gggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaa 54625534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 1440271 - 1440192
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||| ||| |||| |||| |||||||||| | ||||| |||||||||| |||||||| |||||||||||||    
T  1440271 aggggatgtattgggtcatgattctaagagattttaaaatacttttt-atcatgaaaaagtcttgtggtattcaatcaaga 1440192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 279  Q
    |||| ||| ||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 27240563 - 27240483
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  27240563 aggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 27240483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 50762185 - 50762118
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||| ||||||  || ||||||||||||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattgga-ttttgatggatttt 50762118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 6035372 - 6035293
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaag 161  Q
    |||||||||||  ||| | ||||||| |||||||||||||| ||||| || ||| |||| ||||||| ||||||||||||    
T  6035372 agggggtgtatcagattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaag 6035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 23753705 - 23753626
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| ||  ||||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  23753705 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 23753626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 26107148 - 26107227
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || | |||||||||||||||||| || ||| |||||||||||  |||||||||||||    
T  26107148 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaaga 26107227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 31646603 - 31646524
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| ||||||| || | |||| || |||||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  31646603 ggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 31646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 50762369 - 50762290
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||| ||||| |||||||||||||    
T  50762369 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaaga 50762290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 52618284 - 52618197
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgt 170  Q
    |||| |||||| ||| | |||| || |||||||||||||| ||||| || ||||||| |||||||| ||||| ||||||||| |||||    
T  52618284 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttttgt 52618197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 1440005 - 1439952
Alignment:
Q  247 aaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||| ||||||||||||||||||| ||| ||||||| |||||| |||||||||    
T  1440005 aaatttggaaggattgtttaataaattaga-ttttgatagattttgtgggatttt 1439952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 6131436 - 6131398
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  6131436 aaaagtcttgtgttattcaatcaagatccattgtcattt 6131398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 15494054 - 15493964
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctttg 169  Q
    |||||||| |||||||||| |  ||| ||||||||||||||||| ||||| || ||| |||| ||||||  |||| |||||||| ||||||    
T  15494054 tttaggggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttg 15493964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 18749553 - 18749591
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  18749553 aaaagtcttgtggtattcaatcaagactctttgtcattt 18749591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 27240466 - 27240428
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  27240466 aaaagtcttgtggtattcaatcaagactctttgtcattt 27240428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 50762273 - 50762235
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  50762273 aaaagtcttgtggtattcaatcaagactctttgtcattt 50762235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 54628826 - 54628864
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  54628826 aaaagtcttgtggtattcaatcaagactctttgtcattt 54628864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 6975817 - 6975866
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||| ||| |||||||||||||||||||||||||| ||| |||| |||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat 6975866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 10225858 - 10225797
Alignment:
Q  102 gattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||||||||| ||||| || || |||| |||||||| |||||||||||||    
T  10225858 gatttcaagggattttaaaagacttttttattataaaaaagtcttgtgctattcaatcaaga 10225797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 18749460 - 18749536
Alignment:
Q  87 ggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||||| | |||| ||  | ||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  18749460 ggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 18749536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 44906825 - 44906753
Alignment:
Q  91 tattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  44906825 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 44906753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 19452031 - 19451866
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  |||||||| |||||||||||||||||||||       |||||||| |||    
T  19452031 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtat 19451932  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  19451931 tcaaaatcattcaaatttcgaaggatcgtttaataaatcaga-ttttgatggattttgtgggatttt 19451866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 45760233 - 45760067
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtca-tttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||| |||       |||  ||||||||||||||||||||||||||||||       |||||||| ||    
T  45760233 aaaagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 45760134  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  45760133 ttcaaaatcattcaaacttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 45760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 35279649 - 35279814
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||| |||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||| ||||||||||       |||||||| |||    
T  35279649 aaaagacttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtat 35279748  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  35279749 tcaaaatcatttaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 35279814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 21222131 - 21222290
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaat 241  Q
    ||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       |||||| | ||||||||||    
T  21222131 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaat 21222230  T
Q  242 cattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttt 302  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  21222231 cattcaaatttcgaaggattgtttaataaataaga-ttttgatggattttgtgggattttt 21222290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 28824595 - 28824431
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||| ||||||||||       |||  ||||||||||||||||||||||||||||||       |||| ||| |||    
T  28824595 aaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtat 28824496  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  28824495 tcaaaatcattcaaatttcgaa-gattgtttaataaatcaga-ttttgatggattttgtgggatttt 28824431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 45535921 - 45536086
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||| ||||||||||||||       ||   |||||||||||||||||||||||||| |||       |||||||| |||    
T  45535921 aaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtat 45536020  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  45536021 tcaaaatcattcaaatttcgaaagattgtttaataaatcaga-ttttgatggattttgtgggatttt 45536086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 47780688 - 47780853
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||| | ||||||||       |||  ||||||||||||||||||||||||||||||       ||||||||||||    
T  47780688 aaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatat 47780787  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  47780788 tcaaaatcattcaaaattaaaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 47780853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 730125 - 730291
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||        |||||||| ||    
T  730125 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggta 730224  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||| || ||||||    
T  730225 ttcaaaatcattcaaatttcgacgaattgtttaataaatcaga-ttttgatggattttgtgagatttt 730291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 50192774 - 50192608
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||| |||||||||||||||||||||||| |||||||||       |||  ||||||||||||||||||||||||||||||        |||||||| ||    
T  50192774 aaaaatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggta 50192675  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  50192674 ttcaaaatcattcaaattttgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 50192608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 35679351 - 35679186
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||||||||||||||||        || ||  |||||||||||||||||||||||||||       |||  ||| |||    
T  35679351 aaaagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtat 35679252  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  35679251 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggatttgatgggatttt 35679186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 49198491 - 49198327
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       ||   |||||||||||| |||||||||||||||||       ||  |||| |||    
T  49198491 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtat 49198393  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  49198392 tcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 49198327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 49418061 - 49418226
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||||||||||| |||||||||        |   |||||||||||| |||||||||||||||||       |||||||| |||    
T  49418061 aaaagtcttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtat 49418160  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||    
T  49418161 tcaaaatcattcaaatttcaaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 49418226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 301
Target Start/End: Complemental strand, 6304468 - 6304310
Alignment:
Q  145 tgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtgatattcaaaat 241  Q
    |||||||||||||||||||||||||||||||       |||  ||||||||||| ||| | |||||||||||||       |||||||| ||||||||||    
T  6304468 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaat 6304369  T
Q  242 cattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  6304368 cattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 6304310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 29556081 - 29556246
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||||||||||||||| ||||||| |||| ||||       |||  ||| ||||||||||||||||||||||||||        ||||||| |||    
T  29556081 aaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttat 29556180  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  29556181 tcaaaatcattcaaatttcgaaagattgtttaataaattaga-ttttgatggattttatgggatttt 29556246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 48524296 - 48524461
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||| ||||||||||        ||  |||||||| |||||| ||||||||||||||       |||| |||||||    
T  48524296 aaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatat 48524395  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  48524396 tcaaaatcattcaaattttgaaagattgtttaataaatcag-tttttgatggattttgtgggatttt 48524461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 144 - 301
Target Start/End: Complemental strand, 47654568 - 47654409
Alignment:
Q  144 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaa 240  Q
    ||||||||||||||||||||||||||||||||       |||  ||||||||||||||| ||||||||||||||        |||||||| |||||||||    
T  47654568 ttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaa 47654469  T
Q  241 tcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  47654468 ttattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtggaatttt 47654409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 46328019 - 46328184
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  46328019 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtat 46328118  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||| |||  || |||||||||||||| |||||||||    
T  46328119 tcaaaatcattcaaatttcgaaggattgtttaattaattgga-ttttgatggattttgtgggatttt 46328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 51701560 - 51701722
Alignment:
Q  140 agtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattca 237  Q
    ||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| ||||||    
T  51701560 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 51701659  T
Q  238 aaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  51701660 aaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 51701722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 28824695 - 28824606
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  28824695 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 28824606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 953697 - 953785
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  953697 ttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 953785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 32589125 - 32589011
Alignment:
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    |||| ||||||||||||||||| |||||||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||||    
T  32589125 gtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcgga-ttttgatg 32589027  T
Q  286 gattttatgggatttt 301  Q
    |||||| || ||||||    
T  32589026 gattttgtgagatttt 32589011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 6312551 - 6312716
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||| |||||||| |||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  6312551 aaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 6312650  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  6312651 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 6312716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 25612134 - 25612299
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||| | || |||| ||       |||| ||| |||    
T  25612134 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtat 25612233  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| |||||||||    
T  25612234 tcaaaatcattcaaatttcaaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 25612299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 28387616 - 28387451
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    ||||||||| || ||||||||||||||||||||||||||       ||| ||  |||||||||||||||| || |||| ||        ||| ||| |||    
T  28387616 aaaagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtat 28387517  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||| ||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  28387516 tcaaattcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 28387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 29396611 - 29396446
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||| |||| || ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  29396611 aaaaatcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 29396512  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  29396511 tcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggatttt 29396446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 31572323 - 31572255
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  31572323 tattcaaaatcatttaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggatttt 31572255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 45760329 - 45760252
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  45760329 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaa 45760252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 18798468 - 18798605
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  18798468 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 18798567  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18798568 tcaaaatcattcaaatttcgaaggattgtttaataaat 18798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 49230863 - 49231000
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||    
T  49230863 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 49230962  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  49230963 tcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 9322626 - 9322558
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||    
T  9322626 tattcaaaatcattcaaatttagaaggattgtttaataaat-tgaattttgatggattttatgggatttt 9322558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 15835276 - 15835111
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  ||||||||||||||||  | |||| ||        ||| ||| |||    
T  15835276 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtat 15835177  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||| | ||||||||||||||||||  || ||||||||||||||||||||||||    
T  15835176 tcaaaatcattcaaattgcaaaggattgtttaataaattgga-ttttgatggattttatgggatttt 15835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 19452169 - 19452084
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| ||| || |||||||||||| ||||||||||||| |||||    
T  19452169 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactcttt 19452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 21222029 - 21222114
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||  ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  21222029 gggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 21222114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 22183251 - 22183336
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||| ||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  22183251 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 22183336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 280
Target Start/End: Original strand, 33025489 - 33025635
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtgata 233  Q
    |||||| |||| ||||||||||||||||||||| |||||        ||  ||||||||||||||| | |||||||||||||       |||| ||| ||    
T  33025489 aaaagttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggta 33025588  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  33025589 ttcaaaatcattcaaattttgaaggattgtttaatacatcagatttt 33025635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 35279554 - 35279638
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||| |||| |||| |||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  35279554 ggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 35279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 291
Target Start/End: Complemental strand, 38536369 - 38536157
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnn 179  Q
    ||||||| ||||||| || | |||| || |||||||||||||| |||||  | || |||| |||||||| ||||||||||||| ||||||||||||        
T  38536369 ttaggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaa 38536270  T
Q  180 nnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 277  Q
       ||  ||  |||||||||||||||| || || ||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  ||     
T  38536269 aaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgga- 38536171  T
Q  278 ttttgatggatttt 291  Q
    ||||||||||||||    
T  38536170 ttttgatggatttt 38536157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 291
Target Start/End: Complemental strand, 38558587 - 38558375
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnn 179  Q
    ||||||| ||||||| || | |||| || |||||||||||||| |||||  | || |||| |||||||| ||||||||||||| ||||||||||||        
T  38558587 ttaggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaa 38558488  T
Q  180 nnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 277  Q
       ||  ||  |||||||||||||||| || || ||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  ||     
T  38558487 aaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgga- 38558389  T
Q  278 ttttgatggatttt 291  Q
    ||||||||||||||    
T  38558388 ttttgatggatttt 38558375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 49198585 - 49198501
Alignment:
Q  85 ggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||||||| |||| ||||| ||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||    
T  49198585 ggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 49198501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 955824 - 955882
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 291  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  955824 tattcaaaatcattcaaatttcgaagggttgtttaataaatcaga-ttttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 6304577 - 6304494
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||| |||||  ||||| |||||||||||| |||||||||||||    
T  6304577 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaaga 6304494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 47780502 - 47780585
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 47780585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 9577567 - 9577490
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| || ||||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattgga-ttttgatggattttgtgagatttt 9577490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 35679455 - 35679369
Alignment:
Q  77 ttatttagg-gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaag 161  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||| ||||| || ||| |||||||||||| ||||||||||||    
T  35679455 ttatttaggagggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaag 35679369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 37014860 - 37014698
Alignment:
Q  140 agtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattca 237  Q
    ||||||||| |||||||| |||| ||||||||||||       |||  ||||||||||||||| | |||| |||||||       |||| ||||||||||    
T  37014860 agtcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattca 37014761  T
Q  238 aaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||| || |||||||| ||||||  || |||||||||||||| | |||||||    
T  37014760 aaatcattcaaatttctaaagattgttttataaat-tgaattttgatggattttgtcggatttt 37014698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 48177597 - 48177520
Alignment:
Q  223 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||| |||||||||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatggattttgtgggatttt 48177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 730030 - 730114
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||  ||||| |||||||||||| ||||||||||||| |||||    
T  730030 gggggtgtattggatcatgattctaagggattttaaaagacttttt-ttcatgaaaaagtcttgtggtattcaatcaagactcttt 730114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 22183347 - 22183457
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||| ||||||||||||||||||||||||||||||||       |||  ||||||||||||||||| ||||||||||||       |||||||| |||    
T  22183347 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtat 22183446  T
Q  235 tcaaaatcatt 245  Q
    |||||||||||    
T  22183447 tcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 50192870 - 50192785
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    |||||||||||| |||| |||| ||||| ||||||||||| ||||| || ||| |||||||||||| |||||||||||||||||||    
T  50192870 gggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattcttt 50192785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 953796 - 953876
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcactt 215  Q
    |||||||||||||||||||||||||||||||||||||||       |||  ||||||||| ||||||||||||||||||||    
T  953796 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 47654669 - 47654587
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaaga-ttttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| ||||| ||||||| |||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactcttt 47654587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 49417964 - 49418050
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||| |||||||||| |||| |||| |||||||||||| ||||| |||||| ||||||| |||| ||||||||||||| |||||    
T  49417964 agggggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactcttt 49418050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 28541381 - 28541437
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg 136  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||||||| ||||||    
T  28541381 tttagggggtgtattggatcatgattctaagcgattttaaaagatttttttatcatg 28541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 29219318 - 29219418
Alignment:
Q  190 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 289  Q
    ||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||  |||||||||||||||||||  || ||||||||||||    
T  29219318 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattgga-ttttgatggatt 29219416  T
Q  290 tt 291  Q
    ||    
T  29219417 tt 29219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 5495317 - 5495182
Alignment:
Q  139 aagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattc 236  Q
    |||||||||| |||||||| |||| ||||||||||||       ||| ||  |||||||||||||||| || |||||||       |||| ||| |||||    
T  5495317 aagtcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 5495218  T
Q  237 aaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    ||||||||| ||||||| ||||||| ||||||||||    
T  5495217 aaaatcatttaaatttcaaaggattatttaataaat 5495182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 14494186 - 14494224
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14494186 aaaagtcttgtgttattcaatcaagattctttgtcattt 14494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 46327918 - 46328000
Alignment:
Q  79 atttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||||||| || ||||||| | |||| || |||||||||||||| ||||| || ||| ||||||||||||||||||||||||    
T  46327918 atttaggggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaa 46328000  T

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Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 6312449 - 6312534
Alignment:
Q  79 atttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  6312449 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 6312534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 33025393 - 33025470
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||||||||||||||| |||| |||| || ||||||||| ||||| |||||| |||| ||||||| |||||||||||    
T  33025393 gggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaa 33025470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 31622585 - 31622537
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||    
T  31622585 tattcaaaatcattcaaatttcaaaagattgtttaataaatcggatttt 31622537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 9322819 - 9322740
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  9322819 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 9322740  T

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Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 9577755 - 9577672
Alignment:
Q  80 tttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||| |||||||||| | ||||  |||||||||||||||| ||||| || ||| |||||| ||||| |||||||||||||    
T  9577755 tttaggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaaga 9577672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 14494093 - 14494175
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattcttt 168  Q
    ||||||||||||||||| |||| ||||||   |||||||| ||||| |||||| |||| ||||||| ||||||||||||| |||||    
T  14494093 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttt 14494175  T

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Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 49230767 - 49230846
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | ||||||| |||||||||||||| ||||| || ||| ||||||| |||| |||||||||||||    
T  49230767 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaaga 49230846  T

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Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 15835367 - 15835293
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 15835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 42290732 - 42290802
Alignment:
Q  91 tattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    |||||||| | |||| || |||||||||||||||||||| || ||| |||||||||||| |||||||||||    
T  42290732 tattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 42290802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 29219163 - 29219248
Alignment:
Q  79 atttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||| |||||||||| | |||| || || ||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  29219163 atttagggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 29219248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 29396708 - 29396628
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||| | |||| || || ||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  29396708 aggggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 29396628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 48668901 - 48668861
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaat 272  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  48668901 tattcaaaattattcaaatttcgaaagattgtttaataaat 48668861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 8141447 - 8141368
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| ||||||| || | |||| || |||||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  8141447 ggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 8141368  T

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Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 25612038 - 25612117
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | |||| || |||||||||||||| ||||| || ||| |||| ||||||| |||||||||||||    
T  25612038 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaaga 25612117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 42657712 - 42657791
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcat-gaaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||||||||   ||||| ||| |||||||||||| ||||| || ||  |||||||||||| |||||||||||||    
T  42657712 gggggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattcaatcaaga 42657791  T

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Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 47784406 - 47784444
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  47784406 aaaagtcttgtggtattcaatcaagactctttgtcattt 47784444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 48177776 - 48177702
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||| || ||||||||||||  |||||| || ||||||| |||||||| |||||||||||||    
T  48177776 tgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaaga 48177702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 48194585 - 48194667
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||||| ||   ||||| |||||||||||||||| ||||| |  ||| |||||||| ||| |||||||||||||    
T  48194585 ttagggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaaga 48194667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 48203343 - 48203425
Alignment:
Q  81 ttagggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||||| ||   ||||| |||||||||||||||| ||||| |  ||| |||||||| ||| |||||||||||||    
T  48203343 ttagggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaaga 48203425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 19007647 - 19007586
Alignment:
Q  102 gattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||| |||||||||||||||| ||||| || ||| |||||||| ||| |||||||||||||    
T  19007647 gatttcaagggattttaaaagacttttttataatgaaaaagtctagtggtattcaatcaaga 19007586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 31572470 - 31572405
Alignment:
Q  96 gatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    ||||| |||| ||||||||||||| ||| ||||| |||||| |||||||||||| |||||| ||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaagtcttgtggtattcattcaa 31572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 28387705 - 28387633
Alignment:
Q  91 tattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||| | |||| || |||||||||||||| ||||| || ||| ||||||||| || |||||||||||||    
T  28387705 tattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaaga 28387633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 100195 - 100360
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       |||  |||||| |||||||||||||||||||||||       |||||||| |||    
T  100195 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtat 100294  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| |||||||||||||||||||| | |||||||||||||| |||| ||||    
T  100295 tcaaaatcattcaaatttcaaaggattgtttaataaatca-aattttgatggattttgtgggttttt 100360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 100098 - 100176
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaa 160  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||| |||||| ||||||||| || |||||||||||    
T  100098 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaa 100176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 38776 - 38663
Alignment:
Q  186 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 285  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  38776 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat-aatcaga-ttttgatg 38679  T
Q  286 gattttatgggatttt 301  Q
    |||||| |||||||||    
T  38678 gattttgtgggatttt 38663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 38837 - 38755
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaagattctt 167  Q
    ||||||||||||||| |||| |||||||||||||||||| |||| |||||| |||||||||||| ||||||||||||| ||||    
T  38837 gggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagactctt 38755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 301
Target Start/End: Complemental strand, 762 - 597
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtc--gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||||||||||||||||||||||||||||||       ||   ||||||||||||||| ||||||||||||||        | ||||| |||    
T  762 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtat 663  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| ||| |||||    
T  662 tcaaaatcattcaaatttggaaggattgtttaataaatcata-ttttgatggattttgtggaatttt 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 291
Target Start/End: Original strand, 13812 - 14021
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnn 182  Q
    |||| |||||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| ||||||||||||| ||||||||||||           
T  13812 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 13911  T
Q  183 gtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||  ||  |||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  || |||    
T  13912 gtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgga-ttt 14010  T
Q  281 tgatggatttt 291  Q
    |||||||||||    
T  14011 tgatggatttt 14021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 291
Target Start/End: Complemental strand, 21515 - 21306
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcatttnnnnnnn 182  Q
    |||| |||||||||| | |||| || | |||||||||||| ||||| || ||||||| |||||||| ||||||||||||| ||||||||||||           
T  21515 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 21416  T
Q  183 gtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 280  Q
    ||  ||  |||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  || |||    
T  21415 gtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgga-ttt 21317  T
Q  281 tgatggatttt 291  Q
    |||||||||||    
T  21316 tgatggatttt 21306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 10544 - 10709
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||||||||       ||| ||  ||||||||||||||||  | |||| ||        ||| ||| |||    
T  10544 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtat 10643  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||||||||||||||    
T  10644 tcaaaatcattcaaatttcaaaggattgtttaataaat-tgaattttgatggattttatgggatttt 10709  T

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Target: scaffold0543; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 10453 - 10527
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||| || |||||||||||||| ||||| || ||| |||||||||||| |||||||||||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 10527  T

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Target: scaffold0651 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 8654 - 8729
Alignment:
Q  88 gtgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaaga 8729  T

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Target: scaffold0651; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 8746 - 8784
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  8746 aaaagtcttgtgttatttaatcaagattctttgtcattt 8784  T

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Target: scaffold1504 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 301
Target Start/End: Original strand, 847 - 1012
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgata 233  Q
    |||||||||||| ||||||||||||| ||||||||||||        || ||  |||||||||||||||| || |||||||        |||| ||| ||    
T  847 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggta 946  T
Q  234 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| |||||||||    
T  947 ttcaaaatcattcaaatttcgaagaattatttaataaat-aga-ttttgatggattttgtgggatttt 1012  T

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Target: scaffold1504; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 756 - 830
Alignment:
Q  89 tgtattggatcacgattttaagggattttaaaagattttttcatcatg-aaaagtcttgtgttattcaatcaaga 162  Q
    |||||||||| | |||| || |||||||||||||| ||||| || ||| |||| ||||||| |||||||||||||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaaga 830  T

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Target: scaffold0922 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 289
Target Start/End: Original strand, 4184 - 4337
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcatttnnnnnnngtcgtg--gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatat 234  Q
    |||||||||||| ||||||||||||| ||||||| ||||       ||| ||  |||||||||||||||| || |||| ||       |||| ||| |||    
T  4184 aaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 4283  T
Q  235 tcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 289  Q
    |||||||||||||||||| |||||||||||||||||||  || ||||||||||||    
T  4284 tcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggatt 4337  T

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Target: scaffold0922; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 4076 - 4167
Alignment:
Q  73 attgttatttaggggg-tgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||| ||||||||| |||||||||| | |||| ||  ||||||||||||| ||||| ||  |||||| |||||||| |||||||||||||    
T  4076 attgttttttagggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaaga 4167  T

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Target: scaffold0042 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 58202 - 58134
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    ||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||| |||||||||    
T  58202 tattcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatggattttgtgggatttt 58134  T

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Target: scaffold0042; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 58353 - 58274
Alignment:
Q  84 gggggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||| |||||||||| | ||||  | |||||||||||||| ||||| || ||||||| |||||||| |||||||||||||    
T  58353 ggggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 58274  T

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Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 39743 - 39675
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||||||| ||||||||||| ||||||||||  || |||||||||||||| |||||||||    
T  39743 tattcaaaatcattcaaacttcgaaggattatttaataaattgga-ttttgatggattttgtgggatttt 39675  T

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Target: scaffold0054 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 37033 - 36965
Alignment:
Q  232 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggatttt 301  Q
    |||||||||||||| ||||||||||| ||||||||||||||  || |||||||||||||| |||||||||    
T  37033 tattcaaaatcattaaaatttcgaagcattgtttaataaattgga-ttttgatggattttgtgggatttt 36965  T

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Target: scaffold0054; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 37133 - 37050
Alignment:
Q  93 ttggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||| | |||| || |||||||||||||| ||||| || ||||||| |||||||| ||||||||||||| ||||||||||||    
T  37133 ttggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtgctattcaatcaagactctttgtcattt 37050  T

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Target: scaffold0472 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 1972 - 1926
Alignment:
Q  83 agggggtgtattggatcacgattttaagggattttaaaagatttttt 129  Q
    ||||||||||||| |||| ||||||||| |||||||||||| |||||    
T  1972 agggggtgtattgaatcaagattttaagagattttaaaagacttttt 1926  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 233721 - 233759
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  233721 aaaagtcttgtggtattcaatcaagactctttgtcattt 233759  T

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Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 234569 - 234607
Alignment:
Q  137 aaaagtcttgtgttattcaatcaagattctttgtcattt 175  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  234569 aaaagtcttgtggtattcaatcaagactctttgtcattt 234607  T

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Target: scaffold0287 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 11872 - 11795
Alignment:
Q  86 gggtgtattggatcacgattttaagggattttaaaagattttttcatcatgaaaa-gtcttgtgttattcaatcaaga 162  Q
    |||||||||||||   |||||  ||||||||||||||| ||||| || || |||| |||||||| |||||||||||||    
T  11872 gggtgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaaga 11795  T

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