View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8251_low_45 (Length: 308)
Name: NF8251_low_45
Description: NF8251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8251_low_45 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 35092059 - 35092215
Alignment:
| Q |
19 |
caatatggccaagttgaccatatttgttttatgagaatcactttgttagtagaatctgagtttgcattccacttagtaagaatcacatgcctcattgggt |
118 |
Q |
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| T |
35092059 |
caatatggccaagttgaccatatttgttttatgagaatcactttgttagtagaatctgagtttgcattccacttagtaagaatcacatgcttcattgggt |
35092158 |
T |
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| Q |
119 |
cagaaatattggcagattcacgtaagcatatgccaatatggttcacacaagatcaca |
175 |
Q |
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| T |
35092159 |
cagaaatattggcagattcacgtaagcatatgccaatatggttcacacaagatcaca |
35092215 |
T |
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