View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8251_low_7 (Length: 611)

Name: NF8251_low_7
Description: NF8251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8251_low_7
NF8251_low_7
[»] chr6 (17 HSPs)
chr6 (95-397)||(12585251-12585563)
chr6 (410-611)||(29077328-29077529)
chr6 (410-611)||(29112300-29112501)
chr6 (410-611)||(4641355-4641556)
chr6 (409-611)||(2968138-2968340)
chr6 (425-607)||(3018359-3018541)
chr6 (410-501)||(29114776-29114867)
chr6 (409-501)||(17950560-17950652)
chr6 (410-501)||(30639611-30639702)
chr6 (409-469)||(3018528-3018588)
chr6 (405-501)||(4646216-4646312)
chr6 (410-501)||(35174391-35174482)
chr6 (410-512)||(17952064-17952166)
chr6 (447-529)||(32439096-32439178)
chr6 (466-611)||(14338398-14338543)
chr6 (418-529)||(20523374-20523485)
chr6 (409-457)||(35175940-35175988)
[»] chr2 (31 HSPs)
chr2 (95-406)||(28633184-28633505)
chr2 (410-611)||(15372499-15372700)
chr2 (410-611)||(41706539-41706740)
chr2 (410-611)||(29909583-29909784)
chr2 (408-611)||(39320-39523)
chr2 (410-611)||(37417273-37417474)
chr2 (404-611)||(92270-92476)
chr2 (414-563)||(39560-39709)
chr2 (409-603)||(15432327-15432521)
chr2 (414-611)||(42879360-42879556)
chr2 (410-499)||(41144-41233)
chr2 (411-607)||(25619661-25619857)
chr2 (410-501)||(11021533-11021624)
chr2 (410-611)||(42001610-42001810)
chr2 (410-501)||(28248175-28248266)
chr2 (410-501)||(33193-33284)
chr2 (410-501)||(41708430-41708521)
chr2 (410-501)||(15373888-15373979)
chr2 (410-501)||(42880811-42880902)
chr2 (409-501)||(37418769-37418861)
chr2 (420-529)||(16763086-16763195)
chr2 (447-611)||(19908189-19908353)
chr2 (410-512)||(361445-361547)
chr2 (414-512)||(11023035-11023132)
chr2 (420-529)||(14389109-14389218)
chr2 (410-463)||(28246663-28246716)
chr2 (420-529)||(39664773-39664882)
chr2 (450-529)||(40560263-40560342)
chr2 (491-529)||(11315340-11315378)
chr2 (448-529)||(44709770-44709851)
chr2 (413-529)||(17946097-17946213)
[»] chr4 (36 HSPs)
chr4 (410-611)||(10762581-10762782)
chr4 (410-611)||(10372629-10372830)
chr4 (410-611)||(44794683-44794884)
chr4 (410-611)||(47941811-47942012)
chr4 (410-611)||(2350427-2350631)
chr4 (401-611)||(35996054-35996264)
chr4 (410-611)||(44558416-44558617)
chr4 (410-611)||(2827407-2827605)
chr4 (408-501)||(10767950-10768043)
chr4 (410-501)||(10371057-10371148)
chr4 (410-611)||(27624806-27625007)
chr4 (410-611)||(4519376-4519577)
chr4 (410-607)||(51041858-51042054)
chr4 (409-501)||(39923007-39923099)
chr4 (410-501)||(42879275-42879366)
chr4 (418-501)||(44792942-44793025)
chr4 (410-501)||(44992808-44992899)
chr4 (405-501)||(39085152-39085248)
chr4 (410-501)||(2828411-2828502)
chr4 (410-501)||(35997767-35997858)
chr4 (410-501)||(43778389-43778480)
chr4 (410-501)||(47942746-47942837)
chr4 (410-512)||(39083639-39083741)
chr4 (419-501)||(44556629-44556711)
chr4 (420-529)||(41761751-41761860)
chr4 (433-501)||(51040758-51040826)
chr4 (410-512)||(39921494-39921596)
chr4 (411-512)||(39189383-39189484)
chr4 (406-512)||(5484536-5484642)
chr4 (451-501)||(27626728-27626778)
chr4 (410-512)||(42880777-42880879)
chr4 (410-512)||(43779889-43779991)
chr4 (410-483)||(4520469-4520542)
chr4 (410-457)||(5486096-5486143)
chr4 (459-501)||(39190819-39190861)
chr4 (449-529)||(42980674-42980754)
[»] chr3 (41 HSPs)
chr3 (410-611)||(41020926-41021127)
chr3 (398-607)||(23888699-23888908)
chr3 (409-611)||(18430194-18430396)
chr3 (410-611)||(23774152-23774352)
chr3 (404-606)||(31887380-31887582)
chr3 (410-611)||(45257143-45257344)
chr3 (410-611)||(48633877-48634082)
chr3 (410-611)||(33113104-33113304)
chr3 (410-591)||(40508854-40509035)
chr3 (412-611)||(33852593-33852792)
chr3 (410-501)||(40998515-40998606)
chr3 (410-611)||(24382816-24383017)
chr3 (410-554)||(45898328-45898472)
chr3 (410-607)||(2977256-2977453)
chr3 (410-501)||(40508493-40508584)
chr3 (410-550)||(39641823-39641963)
chr3 (410-526)||(51454258-51454374)
chr3 (410-501)||(1847645-1847736)
chr3 (410-501)||(33111841-33111932)
chr3 (410-501)||(45897050-45897141)
chr3 (410-501)||(48635373-48635464)
chr3 (493-611)||(1845867-1845985)
chr3 (401-501)||(23887189-23887289)
chr3 (409-501)||(33850981-33851073)
chr3 (420-611)||(53190703-53190893)
chr3 (420-529)||(27899106-27899215)
chr3 (418-486)||(18428757-18428825)
chr3 (410-501)||(2975460-2975551)
chr3 (447-529)||(21348760-21348842)
chr3 (424-486)||(24381758-24381820)
chr3 (459-501)||(37865433-37865475)
chr3 (420-529)||(2226177-2226286)
chr3 (420-529)||(30599943-30600052)
chr3 (410-501)||(33051465-33051556)
chr3 (410-469)||(41944576-41944635)
chr3 (447-529)||(35905737-35905819)
chr3 (411-501)||(49494477-49494567)
chr3 (420-529)||(41977760-41977869)
chr3 (420-529)||(51684620-51684729)
chr3 (420-529)||(54898447-54898556)
chr3 (413-501)||(45255486-45255574)
[»] chr1 (35 HSPs)
chr1 (410-611)||(47269379-47269580)
chr1 (403-611)||(27940601-27940809)
chr1 (404-611)||(36895433-36895640)
chr1 (410-611)||(46638730-46638931)
chr1 (410-607)||(42134482-42134679)
chr1 (410-611)||(31801633-31801834)
chr1 (410-611)||(44157433-44157634)
chr1 (409-611)||(35479899-35480100)
chr1 (460-611)||(45380907-45381058)
chr1 (410-501)||(47264124-47264215)
chr1 (410-611)||(33685172-33685372)
chr1 (410-611)||(18183867-18184067)
chr1 (410-499)||(35478087-35478176)
chr1 (404-501)||(45379079-45379176)
chr1 (405-501)||(31803700-31803796)
chr1 (410-501)||(5784867-5784958)
chr1 (410-501)||(11152545-11152636)
chr1 (408-501)||(27952500-27952593)
chr1 (489-611)||(6575271-6575391)
chr1 (410-501)||(18180500-18180591)
chr1 (410-501)||(33679259-33679350)
chr1 (411-499)||(6577107-6577195)
chr1 (411-501)||(46636766-46636856)
chr1 (410-501)||(44159294-44159385)
chr1 (420-529)||(4855971-4856080)
chr1 (447-611)||(31238418-31238582)
chr1 (420-529)||(2869589-2869698)
chr1 (404-457)||(5783358-5783411)
chr1 (420-529)||(34778143-34778252)
chr1 (418-479)||(36894830-36894891)
chr1 (409-501)||(42136244-42136336)
chr1 (420-611)||(6818601-6818792)
chr1 (420-611)||(25278291-25278482)
chr1 (410-529)||(51121905-51122024)
chr1 (420-514)||(25278973-25279067)
[»] chr7 (37 HSPs)
chr7 (410-611)||(8423204-8423405)
chr7 (400-611)||(35344213-35344423)
chr7 (410-611)||(46996625-46996826)
chr7 (410-611)||(46812505-46812706)
chr7 (410-611)||(23953805-23954006)
chr7 (410-611)||(47341605-47341810)
chr7 (407-608)||(2167476-2167677)
chr7 (410-523)||(38613492-38613605)
chr7 (410-611)||(33038720-33038921)
chr7 (395-501)||(35342410-35342516)
chr7 (412-501)||(46810707-46810796)
chr7 (405-611)||(2492322-2492527)
chr7 (410-554)||(38614892-38615035)
chr7 (410-501)||(4321038-4321129)
chr7 (410-501)||(8421416-8421507)
chr7 (410-501)||(30108565-30108656)
chr7 (410-501)||(46994660-46994751)
chr7 (409-611)||(27955369-27955571)
chr7 (410-607)||(40784346-40784543)
chr7 (418-501)||(36762680-36762763)
chr7 (410-501)||(45465184-45465275)
chr7 (410-501)||(40785548-40785639)
chr7 (411-501)||(36756883-36756973)
chr7 (411-501)||(36766407-36766497)
chr7 (410-499)||(33775408-33775497)
chr7 (410-512)||(45463670-45463772)
chr7 (420-611)||(39859152-39859343)
chr7 (411-501)||(3690151-3690241)
chr7 (411-463)||(30109737-30109789)
chr7 (418-501)||(33037701-33037785)
chr7 (418-501)||(47339784-47339867)
chr7 (460-611)||(6602385-6602536)
chr7 (420-499)||(13169683-13169762)
chr7 (420-611)||(37796104-37796295)
chr7 (449-525)||(24228418-24228494)
chr7 (420-512)||(29996536-29996628)
chr7 (449-529)||(34776920-34777000)
[»] scaffold0477 (1 HSPs)
scaffold0477 (410-611)||(6557-6758)
[»] chr8 (35 HSPs)
chr8 (410-603)||(31201074-31201267)
chr8 (410-611)||(42897697-42897898)
chr8 (410-611)||(1320617-1320818)
chr8 (410-611)||(38882720-38882921)
chr8 (400-607)||(8654491-8654696)
chr8 (410-611)||(37525946-37526147)
chr8 (410-529)||(31821418-31821537)
chr8 (404-611)||(32822355-32822561)
chr8 (410-599)||(33160083-33160272)
chr8 (447-611)||(33750307-33750471)
chr8 (410-604)||(462300-462494)
chr8 (418-501)||(31823476-31823559)
chr8 (410-501)||(32824271-32824362)
chr8 (410-501)||(33748332-33748423)
chr8 (410-509)||(25373614-25373713)
chr8 (410-501)||(31199485-31199576)
chr8 (410-501)||(40019156-40019247)
chr8 (425-501)||(24526911-24526987)
chr8 (418-501)||(461184-461267)
chr8 (410-509)||(25707293-25707392)
chr8 (404-484)||(38881422-38881502)
chr8 (433-501)||(42894799-42894867)
chr8 (410-529)||(9184383-9184502)
chr8 (447-611)||(8609731-8609894)
chr8 (420-529)||(13282488-13282597)
chr8 (416-512)||(28433738-28433834)
chr8 (420-611)||(13108280-13108470)
chr8 (410-501)||(33368759-33368850)
chr8 (410-501)||(44620669-44620760)
chr8 (453-529)||(9673190-9673266)
chr8 (447-611)||(38547265-38547428)
chr8 (450-529)||(26242339-26242418)
chr8 (459-501)||(1322314-1322356)
chr8 (420-529)||(27691164-27691273)
chr8 (449-529)||(41042609-41042689)
[»] chr5 (27 HSPs)
chr5 (410-607)||(35395333-35395528)
chr5 (410-611)||(18728525-18728726)
chr5 (410-611)||(32087514-32087715)
chr5 (409-611)||(33256399-33256601)
chr5 (410-611)||(43317983-43318184)
chr5 (410-611)||(38178016-38178217)
chr5 (410-611)||(38205240-38205441)
chr5 (410-611)||(35292305-35292505)
chr5 (410-522)||(38596868-38596980)
chr5 (410-501)||(40330515-40330606)
chr5 (410-501)||(32089925-32090016)
chr5 (410-499)||(32835876-32835965)
chr5 (410-501)||(42619289-42619380)
chr5 (489-611)||(38597024-38597146)
chr5 (418-501)||(33257760-33257843)
chr5 (425-501)||(38176647-38176723)
chr5 (425-501)||(38203871-38203947)
chr5 (420-611)||(17574328-17574518)
chr5 (410-501)||(35291048-35291139)
chr5 (420-529)||(36057618-36057727)
chr5 (410-501)||(18726565-18726656)
chr5 (447-529)||(24496780-24496862)
chr5 (470-611)||(32838423-32838567)
chr5 (447-529)||(2179824-2179906)
chr5 (420-529)||(7267853-7267962)
chr5 (452-529)||(30468285-30468362)
chr5 (420-529)||(34327645-34327754)
[»] scaffold1041 (1 HSPs)
scaffold1041 (433-509)||(2121-2197)
[»] scaffold0058 (2 HSPs)
scaffold0058 (420-529)||(3304-3413)
scaffold0058 (420-529)||(4476-4585)


Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 95 - 397
Target Start/End: Complemental strand, 12585563 - 12585251
Alignment:
Q  95 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttcactaacaggacattttgtctagtttttggtt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12585563 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttcactaacgggacattttgtctagtttttggtt 12585464  T
Q  195 tatgtcattgattcaactaaacagcttgattgttgagatgaaacattgatatcgaagctatgaatattaaagcattgtagtaatgagaaaggagagctgc 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  12585463 tatgtcattgattcaactaaacagcttgattgttgagatgaaacagtgctatcgaagctatgaatattaaagcattgtagtaatgagaaa--agagctgc 12585366  T
Q  295 aaataacattt-----------tatttatacaagctagtgaaaccttggcccattggaaaaa-agaacctcctatattcatttggcttggcccatagctt 382  Q
    |||||||||||           |||  ||||||||||||| |||||||||||||||||||||  |||| | ||||||||||||||| ||||||| || ||    
T  12585365 aaataacatttttgttttatgatatgaatacaagctagtgcaaccttggcccattggaaaaatggaacgtactatattcatttggcctggcccaaagttt 12585266  T
Q  383 gaattaggtctcctt 397  Q
    |||||||||||||||    
T  12585265 gaattaggtctcctt 12585251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 29077328 - 29077529
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29077427  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  29077428 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgt 29077527  T
Q  610 gt 611  Q
    ||    
T  29077528 gt 29077529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 29112300 - 29112501
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29112399  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  29112400 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 29112499  T
Q  610 gt 611  Q
    ||    
T  29112500 gt 29112501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 4641355 - 4641556
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||| |||||||||||| |||||| ||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 4641454  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  4641455 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtttccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgt 4641554  T
Q  610 gt 611  Q
    ||    
T  4641555 gt 4641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 409 - 611
Target Start/End: Original strand, 2968138 - 2968340
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 508  Q
    ||||||||||||||| || |||||| |||||||||| |||  ||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  2968138 ggagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgt 2968237  T
Q  509 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacg 608  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  2968238 ccatcaaaaaggtccatccgttaacgggctccgttagccgtgctgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacg 2968337  T
Q  609 tgt 611  Q
    |||    
T  2968338 tgt 2968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 425 - 607
Target Start/End: Complemental strand, 3018541 - 3018359
Alignment:
Q  425 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccc 524  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||  |||||||||||||||||||||||| |||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccc 3018442  T
Q  525 tccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    ||| |  | | ||||||||||||||| |||  | ||| ||| |||| |||| |||| |||||||||||||||| |||||||||    
T  3018441 tccatccaagtgctccgttagccatgttgatctatcgtcttgcatgatgtgttgtcttgtacgcgtggcaagacggaagccac 3018359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 29114867 - 29114776
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29114867 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaatttcatccctgaatttgt 29114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 409 - 501
Target Start/End: Original strand, 17950560 - 17950652
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||||||||||| ||| |||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  17950560 ggagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 17950652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 30639611 - 30639702
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||  |||||||||    
T  30639611 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaatttgt 30639702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 3018588 - 3018528
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaatt 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||    
T  3018588 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctgaatt 3018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 501
Target Start/End: Complemental strand, 4646312 - 4646216
Alignment:
Q  405 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||| |||||||||||||| ||  |||||||||||| |||  ||||  ||||| |||| ||||||||||||||| ||||||| |||||| |||||||    
T  4646312 aaaaagagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgt 4646216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 35174391 - 35174482
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || ||  ||||||||| |||||| ||||||| ||  ||||||||||    
T  35174391 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaatttaatttctgaatttgt 35174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 410 - 512
Target Start/End: Complemental strand, 17952166 - 17952064
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  17952166 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 17952067  T
Q  510 cat 512  Q
    |||    
T  17952066 cat 17952064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 529
Target Start/End: Complemental strand, 32439178 - 32439096
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  32439178 tcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 32439096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 611
Target Start/End: Complemental strand, 14338543 - 14338398
Alignment:
Q  466 aattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctt 565  Q
    |||| |||||||| || | |||||||||||||||  ||||||||||| |||| |||||||||||| |   |||||||||   ||| |||  | ||   ||    
T  14338543 aattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccctccgttcaaaagctccgttactgatgatgatgtatcctgtt 14338444  T
Q  566 tcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
     |||| |||| |||||||||| |||| ||| |||||||||||||||    
T  14338443 gcatgatgtgttgtcctgtacacgtgtcaacaaggaagccacgtgt 14338398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 529
Target Start/End: Original strand, 20523374 - 20523485
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaa 517  Q
    |||||||||| |||  |||||||||    |||| |||||| |||| | |||| |||||||| || ||||  |||||||||||  ||||||||||| ||||    
T  20523374 catcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaa 20523473  T
Q  518 aggtccctccgt 529  Q
     |||||||||||    
T  20523474 tggtccctccgt 20523485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 457
Target Start/End: Complemental strand, 35175988 - 35175940
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaatt 457  Q
    ||||||||||||||| ||||||| |||||||||| |  |||||||||||    
T  35175988 ggagtgaaccatcaatttcgtccttgaattttcagggatcggccaaatt 35175940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 95 - 406
Target Start/End: Original strand, 28633184 - 28633505
Alignment:
Q  95 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttcactaacaggacattttgtctagtttttggtt 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  28633184 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttaactaacgggacattttgtatagtttttggtt 28633283  T
Q  195 tatgtcattgattcaactaaacagcttgattgttgagatgaaacattgatatcgaagctatgaatattaaagcattgtagtaatgagaaaggagagctgc 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  28633284 tatgtcattgattcaactaaacagcttgattgttgagatgaaacaatgatatcgaagctatgaatattaaagcattgtagtaatgagaaa--agagctgc 28633381  T
Q  295 aaataacattt-----------tatttatacaagctagtgaaaccttggcccattggaaaa-aagaacctcctatattcatttggcttggcccatagctt 382  Q
    |||||||||||           |||  ||||||||||||| ||||||||||||||||||||   |||| | |||||||| |||||| ||||||| || ||    
T  28633382 aaataacatttttgttttatgatatgaatacaagctagtgcaaccttggcccattggaaaaccggaacatactatattcgtttggcctggcccaaagttt 28633481  T
Q  383 gaattaggtctccttagttttaaa 406  Q
    |||||||||||||||  |||||||    
T  28633482 gaattaggtctccttgattttaaa 28633505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 15372499 - 15372700
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| | ||||||||||||| |||| ||||||| |||||||||||| |||||||||    
T  15372499 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtc 15372598  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  15372599 catcaaaaaggtccctccgttaacgggctccgttagccatgctaacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgt 15372698  T
Q  610 gt 611  Q
    ||    
T  15372699 gt 15372700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 41706539 - 41706740
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || || |||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| ||  |||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtc 41706638  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||    
T  41706639 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagtcacgt 41706738  T
Q  610 gt 611  Q
    ||    
T  41706739 gt 41706740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 29909784 - 29909583
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||  ||||| |||||||||||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtc 29909685  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | |||| |||||||||| |||  |||||| || |||| |||| |||| ||||||||||||||||||||||||||||    
T  29909684 catcaaaaaggtccctccgtccaagtgctctgttagccatgttgatctgtcgcgttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccacgt 29909585  T
Q  610 gt 611  Q
    ||    
T  29909584 gt 29909583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 408 - 611
Target Start/End: Complemental strand, 39523 - 39320
Alignment:
Q  408 aggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacg 507  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||| || || ||||||||||||||||| |||| ||  |||||||||||||||||||    
T  39523 aggagtgaaccatcaaatttgtccccgaattttcacgcgtcagccaactttgtacctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 39424  T
Q  508 tccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    | ||| ||||||||||| ||||  | | | ||||||||||||||||| |||||| ||| ||||||||| |||| ||||||||||||||||||||||||||    
T  39423 ttcatcaaaaaggtccccccgtccaagtgttccgttagccatgctgatatgtcgtcttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccac 39324  T
Q  608 gtgt 611  Q
    ||||    
T  39323 gtgt 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 37417273 - 37417474
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||| |||||||| |||||||||| | ||||||||||||  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 37417372  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||| |||  | | |||||||||||||||||||  ||| ||| | ||||||||| |||| ||||| ||||||||||||||||||||||    
T  37417373 catcaaaaaggtcccttcgtccaagtgctccgttagccatgctgatctgttgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgt 37417472  T
Q  610 gt 611  Q
    ||    
T  37417473 gt 37417474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 404 - 611
Target Start/End: Complemental strand, 92476 - 92270
Alignment:
Q  404 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 503  Q
    ||||| ||||||||||||||||| |||||||||||||||||| || | ||| || || ||||||||||||||||| |||| ||  ||  |||||||||||    
T  92476 aaaaaagagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagtctttgaatttgtca 92378  T
Q  504 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaag 603  Q
    ||||| ||| ||||||||||||| ||  | | ||||||||||||||||||| |||||| ||| ||||||||| |||| |||||| |||||||||||||||    
T  92377 gacgttcatcaaaaaggtccctcagtccaagtgctccgttagccatgctgatatgtcgtcttgcatgctgtgttgtcttgtacgtgtggcaagaaggaag 92278  T
Q  604 ccacgtgt 611  Q
    ||||||||    
T  92277 ccacgtgt 92270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 414 - 563
Target Start/End: Original strand, 39560 - 39709
Alignment:
Q  414 gaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccata 513  Q
    |||||||||| || ||||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||| |||| ||     
T  39560 gaaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgatt 39659  T
Q  514 aaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcc 563  Q
    ||||||||||||||||  | | ||| ||||||||||||||||||||||||    
T  39660 aaaaaggtccctccgtccaagtgcttcgttagccatgctgacatgtcgcc 39709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 409 - 603
Target Start/End: Original strand, 15432327 - 15432521
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 508  Q
    ||||||||||||||||||  ||| |||||||| | | ||||| ||||||  ||||||||||||||||||| |||||||  || |||||||||||||||||    
T  15432327 ggagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgt 15432426  T
Q  509 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaag 603  Q
    |||| |||||||| | | |||  | | ||||  |||| ||||||||||||||||| | |||| |||| |||| ||||| ||||||||||||||||    
T  15432427 ccatcaaaaaggttcattcgtccaagtgctctattagtcatgctgacatgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaag 15432521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 611
Target Start/End: Original strand, 42879360 - 42879556
Alignment:
Q  414 gaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccata 513  Q
    |||||||||||||||||| | |||||| ||| ||||| ||||||  ||||| |||||||||||| | ||| ||  ||  ||||||||||||||||||||     
T  42879360 gaaccatcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattatgcgaaaat-caacttagtctatgaatttgtcagacgtccatc 42879458  T
Q  514 aaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||||||||  | | | |||||||| |||||||| |||||||| | ||||||||| |||| ||||| |||| ||||||||||| |||||||    
T  42879459 aaaaaggtccctccgtccaagtgttccgttagtcatgctgatatgtcgccctgcatgctgtgttgtcttgtacacgtgacaagaaggaagtcacgtgt 42879556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 410 - 499
Target Start/End: Complemental strand, 41233 - 41144
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  41233 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 411 - 607
Target Start/End: Original strand, 25619661 - 25619857
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtcc 510  Q
    ||||||||||||||||||||| |||||||| | | ||||| ||||||  |||||||||||||| |||| |||| ||  ||||||||||||||| | ||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtcc 25619760  T
Q  511 ataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    || |||||||||||||| |  | | ||||||||||||||| |||  ||||||  | |||| || | |||| | ||| ||||||||||| ||||||||    
T  25619761 atcaaaaaggtccctccatccaagtgctccgttagccatgttgatctgtcgctctgcatgttgcgttgtcttatacacgtggcaagaaagaagccac 25619857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 11021533 - 11021624
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  11021533 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 11021624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 42001610 - 42001810
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||| ||| || | |||||||  |||||| |||||||||||| ||||||| |||| |||||||||||||| |     
T  42001610 gagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaatttaatccttgaatttgtcagacat- 42001708  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||| | ||| |  | | ||| ||||||||||| |||  ||||||| | |||| || | |||| ||||| |||| ||||||||||| |||||    
T  42001709 catcaaaaaggttcatccatccaagtgcttcgttagccatgttgatgtgtcgccctgcatgttgagttgtcttgtacacgtgacaagaaggaagtcacgt 42001808  T
Q  610 gt 611  Q
    ||    
T  42001809 gt 42001810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 28248266 - 28248175
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  28248266 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 28248175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 33193 - 33284
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||| ||||| ||||||| ||||||||||||||    
T  33193 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgt 33284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 41708521 - 41708430
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || ||| ||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  41708521 gagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 41708430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 15373979 - 15373888
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || ||||||||||| ||||  |||||||||||| || ||||||||||||||||| ||||||| || |||||||||||    
T  15373979 gagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaatttgt 15373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 42880902 - 42880811
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||||| |||||| |||||| ||||||||||||| ||||||| |||| | |||||||    
T  42880902 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgt 42880811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 409 - 501
Target Start/End: Complemental strand, 37418861 - 37418769
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||| |||||| ||||| | |||||||||||| |||||||||||| |||| | |||||||| |||| ||||| | |||||| |||||||    
T  37418861 ggagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcctttaattatgcaaaatatcaatctaatccctaaatttgt 37418769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 16763086 - 16763195
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  16763086 tcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 16763185  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  16763186 gtccctccgt 16763195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 611
Target Start/End: Complemental strand, 19908353 - 19908189
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagc 546  Q
    |||||||||||||||||| |||| |||||||| || ||||  ||| |||||||  ||||||||| | |||| |||||||||||  |   ||||||||||     
T  19908353 tcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaagctccgttagt 19908254  T
Q  547 catgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
      || |||| ||||  ||| ||||||||| |||| ||||| |||| ||| |||  ||||||||||    
T  19908253 ggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgt 19908189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 512
Target Start/End: Original strand, 361445 - 361547
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||| ||||||| |||||||||| |  ||||||||| |  ||||||||||||| ||||| |||| ||  ||  |||||| ||||||||||    
T  361445 gagtgaatcatcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtc 361544  T
Q  510 cat 512  Q
    |||    
T  361545 cat 361547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 512
Target Start/End: Complemental strand, 11023132 - 11023035
Alignment:
Q  414 gaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccat 512  Q
    |||||||||| |||||||||||||||||| | |||||||||||| ||||| |||||   |||||| ||||  |  |||||||||||||  |||||||||    
T  11023132 gaaccatcaatttcgtccctgaattttca-gggtcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccat 11023035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 14389218 - 14389109
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||  ||||||||||    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  || | |||||| |||| |    
T  14389218 tcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatg 14389119  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  14389118 gtccctccgt 14389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 410 - 463
Target Start/End: Original strand, 28246663 - 28246716
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 463  Q
    |||||||||||||| |||||||||||||||| | | |||||||||||| |||||    
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccc 28246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 39664882 - 39664773
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||| |||||  |||| | |||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  39664882 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 39664783  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  39664782 gtccctccgt 39664773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 529
Target Start/End: Original strand, 40560263 - 40560342
Alignment:
Q  450 gccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| ||||  ||||||||||    
T  40560263 gccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccctccgt 40560342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 529
Target Start/End: Complemental strand, 11315378 - 11315340
Alignment:
Q  491 cctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  11315378 cctgaatttgtcagacgtccatcaaaatggtccctccgt 11315340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 44709851 - 44709770
Alignment:
Q  448 cggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||||||||| | |||| |||| ||||||||  | ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  44709851 cggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 44709770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 529
Target Start/End: Original strand, 17946097 - 17946213
Alignment:
Q  413 tgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccat 512  Q
    |||| |||||| ||||||||||||||| || || || || ||| | |||| | |||| ||| |||| |||||||  ||||||||||| ||  | ||||||    
T  17946097 tgaatcatcaacttcgtccctgaatttgcaagcatcagctaaaatcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccat 17946196  T
Q  513 aaaaaaggtccctccgt 529  Q
     |||| |||||||||||    
T  17946197 caaaatggtccctccgt 17946213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 10762581 - 10762782
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10762581 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 10762680  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  10762681 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 10762780  T
Q  610 gt 611  Q
    ||    
T  10762781 gt 10762782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 10372830 - 10372629
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10372830 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtc 10372731  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  10372730 catcaaaaaggtccctccgttaacggactccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaagaagccacgt 10372631  T
Q  610 gt 611  Q
    ||    
T  10372630 gt 10372629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 44794884 - 44794683
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || |||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 44794785  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  44794784 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgatgtcttgtacgcgtggcaagaaggaagccacgt 44794685  T
Q  610 gt 611  Q
    ||    
T  44794684 gt 44794683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 47941811 - 47942012
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||| ||| ||||| |||||| ||| |||||||||||||||| ||||||| |||||||||||| |||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 47941910  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  47941911 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgt 47942010  T
Q  610 gt 611  Q
    ||    
T  47942011 gt 47942012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 2350631 - 2350427
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||| |||||||| ||||||||     
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgtt 2350532  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctg---tcctgtacgcgtggcaagaaggaagcca 606  Q
    ||| ||||||||||||| ||  | | |||||||||||||||||||||||||||  | ||||||||| ||   || ||||| |||||||||||||||||||    
T  2350531 catcaaaaaggtccctctgtccaagtgctccgttagccatgctgacatgtcgctctgcatgctgtgttgtactcttgtacacgtggcaagaaggaagcca 2350432  T
Q  607 cgtgt 611  Q
    |||||    
T  2350431 cgtgt 2350427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 401 - 611
Target Start/End: Original strand, 35996054 - 35996264
Alignment:
Q  401 tttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttg 500  Q
    |||||||  |||||||||||||| || ||| ||| ||||| | | ||||| |||||| ||||||||||| ||| |||| ||||||| ||||||||||||     
T  35996054 tttaaaatagagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaattta 35996153  T
Q  501 tcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaagg 600  Q
    |||||||||||| ||||||||||||||||  | | |||||||||||||||||||||||||||| | |||| |||| |||| ||||| |||||||||||||    
T  35996154 tcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagccatgctgacatgtcgccatgcatgttgtgttgtcttgtacacgtggcaagaagg 35996253  T
Q  601 aagccacgtgt 611  Q
    |||||||||||    
T  35996254 aagccacgtgt 35996264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 44558617 - 44558416
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  44558617 gagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 44558518  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||| |||||  | | |||  ||||||||||||||  |||| || | |||||| || |||| ||||||||||||||||||||||||||||    
T  44558517 catcaaaaaggtccttccgtccaagtgctatgttagccatgctgatctgtcaccatgcatgctctgttgtcttgtacgcgtggcaagaaggaagccacgt 44558418  T
Q  610 gt 611  Q
    ||    
T  44558417 gt 44558416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 2827407 - 2827605
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||||| ||||| |||| ||  ||| |||||||||||||||||    
T  2827407 gagtgaaccatcaaattcgtccctaaattttcacacgtcggccaac---gtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtc 2827503  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | |  ||||||||||| ||||||  ||||| ||| |||| |||| |||| ||||||||||||||||||||||||||||    
T  2827504 catcaaaaaggtccctccgtccaagtcctccgttagccttgctgatctgtcgtcttgcatgatgtgttgtcttgtacgcgtggcaagaaggaagccacgt 2827603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 408 - 501
Target Start/End: Complemental strand, 10768043 - 10767950
Alignment:
Q  408 aggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10768043 aggagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgt 10767950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 10371057 - 10371148
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10371057 gagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgt 10371148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 27624806 - 27625007
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||  |||| |||| || |||||||| ||| || || ||||||  ||  ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  27624806 gagtgaacggtcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 27624905  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||  ||||| || | |||| |||||||||| |||  ||||||| | |||||| || |||| |||||| |||||||||||||||||||||    
T  27624906 catcaaaaaggtcattccgtcaaagtgctctgttagccatgttgatctgtcgccatgcatgctttgttgtcttgtacgtgtggcaagaaggaagccacgt 27625005  T
Q  610 gt 611  Q
    ||    
T  27625006 gt 27625007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 4519376 - 4519577
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||| ||||||||||||| |||||||| ||  || |||||||||  ||||||||||||||||||| |||  ||   |  ||||||||| |||| |     
T  4519376 gagtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattatgcgaaatatcagcttagcctttgaatttgttagacatt 4519475  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  |   |||||||||||||||||||  ||||||| | ||||||||| |||| ||||| |||||||| ||| ||| |||||    
T  4519476 catcaaaaaggtccctccgtccaaatgctccgttagccatgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggcaaaaagaaagtcacgt 4519575  T
Q  610 gt 611  Q
    ||    
T  4519576 gt 4519577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 410 - 607
Target Start/End: Complemental strand, 51042054 - 51041858
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||| |||||||||||| | |||||| ||  ||||| ||||||  ||||||||||||| ||||| |||| ||  ||| ||||||||||||||||     
T  51042054 gagtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgtcagacgt- 51041956  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    ||| |||||||||||||| |  | | |||  ||||||||||||||  ||||||| | |||| |||| |||| | ||| ||||||||||||||||||||    
T  51041955 catcaaaaaggtccctccatccaagtgctttgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaaggaagccac 51041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 409 - 501
Target Start/End: Complemental strand, 39923099 - 39923007
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||||||||||| |||||||||||||||| ||  ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  39923099 ggagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 39923007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 42879275 - 42879366
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| |||| |||||||||    
T  42879275 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 42879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 418 - 501
Target Start/End: Original strand, 44792942 - 44793025
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  44792942 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 44793025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 44992808 - 44992899
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| |||||||| |||||    
T  44992808 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgt 44992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 405 - 501
Target Start/End: Complemental strand, 39085248 - 39085152
Alignment:
Q  405 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||| ||||||| |||||| |||||||||||||||| ||| ||||| ||| || |||||||||||||||||||| ||||||| |||| |||||||||    
T  39085248 aaaatgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 39085152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 2828502 - 2828411
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| | | ||||||||| || |||||||||||||||||||| ||||||| |||| |||||||||    
T  2828502 gagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 2828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 35997858 - 35997767
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || ||||||||||||||||| |||||||||||| || ||||||||||  ||||| ||||||| ||||||||||||||    
T  35997858 gagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgt 35997767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 43778389 - 43778480
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||| |||||||| ||| ||||| ||| || |||||||||||||||||||| ||||||| |||||| |||||||    
T  43778389 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 43778480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 47942837 - 47942746
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || || | |||||| ||||| ||||| |||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  47942837 gagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 47942746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 410 - 512
Target Start/End: Original strand, 39083639 - 39083741
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||| ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  39083639 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39083738  T
Q  510 cat 512  Q
    |||    
T  39083739 cat 39083741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 419 - 501
Target Start/End: Original strand, 44556629 - 44556711
Alignment:
Q  419 atcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||| || ||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| |||||||  ||| |||||||||    
T  44556629 atcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgt 44556711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 41761860 - 41761751
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| ||||||||||    ||||||||||| |||||  |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  41761860 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 41761761  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  41761760 gtccctccgt 41761751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 433 - 501
Target Start/End: Original strand, 51040758 - 51040826
Alignment:
Q  433 tgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||| ||||||  ||||||||||||||    
T  51040758 tgaattttcacgggtcggccaaattcatccttcaattatgcgaaatatcaattcaatccctgaatttgt 51040826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 410 - 512
Target Start/End: Original strand, 39921494 - 39921596
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  39921494 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39921593  T
Q  510 cat 512  Q
    |||    
T  39921594 cat 39921596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 512
Target Start/End: Original strand, 39189383 - 39189484
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtcc 510  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  |||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtcc 39189482  T
Q  511 at 512  Q
    ||    
T  39189483 at 39189484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 512
Target Start/End: Original strand, 5484536 - 5484642
Alignment:
Q  406 aaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcaga 505  Q
    |||||||||||||||||| ||||||| |||||||| | | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||    
T  5484536 aaaggagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttga 5484635  T
Q  506 cgtccat 512  Q
    |||||||    
T  5484636 cgtccat 5484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 501
Target Start/End: Complemental strand, 27626778 - 27626728
Alignment:
Q  451 ccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  27626778 ccaaattagtccatgaattatgcgaaatatcaatttaatccctgaatttgt 27626728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 512
Target Start/End: Complemental strand, 42880879 - 42880777
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  42880879 gagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 42880780  T
Q  510 cat 512  Q
    |||    
T  42880779 cat 42880777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 512
Target Start/End: Complemental strand, 43779991 - 43779889
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||| |||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 43779892  T
Q  510 cat 512  Q
    |||    
T  43779891 cat 43779889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 410 - 483
Target Start/End: Complemental strand, 4520542 - 4520469
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 483  Q
    ||||||| |||||| ||||||| |||||||| | | ||||||||||||  ||| ||||||||||||||| ||||    
T  4520542 gagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaa 4520469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 5486143 - 5486096
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaatt 457  Q
    |||||||||||||| |||||||||||||||| | | ||||||||||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaatt 5486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 39190861 - 39190819
Alignment:
Q  459 gtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||||||||| ||||||| |||| |||||||||    
T  39190861 gtccctcaattatgcgaaatatcaatttaatccgtgaatttgt 39190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 529
Target Start/End: Original strand, 42980674 - 42980754
Alignment:
Q  449 ggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    ||||||||| |||| | |||| | ||||||||| ||||  ||||| |||||  ||||||||||| |||| |||||||||||    
T  42980674 ggccaaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgt 42980754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 41021127 - 41020926
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41021127 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 41021028  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  41021027 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 41020928  T
Q  610 gt 611  Q
    ||    
T  41020927 gt 41020926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 398 - 607
Target Start/End: Complemental strand, 23888908 - 23888699
Alignment:
Q  398 agttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaat 497  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||  ||  |||||||||    
T  23888908 agttttataaacgagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaat 23888809  T
Q  498 ttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaaga 597  Q
    |||||| |||||||| ||||||||||||||||  |    ||||||||||| ||||||  ||||||||| ||| ||||| |||| ||||||||||||||||    
T  23888808 ttgtcaaacgtccatcaaaaaggtccctccgtccaaatcctccgttagccttgctgatctgtcgccttgcatactgtgttgtcttgtacgcgtggcaaga 23888709  T
Q  598 aggaagccac 607  Q
    ||||||||||    
T  23888708 aggaagccac 23888699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 409 - 611
Target Start/End: Complemental strand, 18430396 - 18430194
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 508  Q
    ||||||||||||||||||||||| |||||||| ||| ||| ||||||||  ||||||||||||||||||| |||| ||  ||||||||| ||||||||||    
T  18430396 ggagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgt 18430297  T
Q  509 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacg 608  Q
    |||  ||||||||||||||||  | | ||||||||||||||| |||||||||||| | ||||| ||| |||| ||||| ||||||||||||||| |||||    
T  18430296 ccaataaaaaggtccctccgtccaagtgctccgttagccatggtgacatgtcgccctgcatgccgtgttgtcttgtacacgtggcaagaaggaaaccacg 18430197  T
Q  609 tgt 611  Q
    |||    
T  18430196 tgt 18430194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 23774152 - 23774352
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  23774152 gagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtc 23774251  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||| |||||| |||  | | |||| |||||||||| |||  ||||||| | |||| |||| |||| ||||| |||||||| |||||||||||||    
T  23774252 catcaaaaaagtccct-cgtctaagtgctctgttagccatgttgatctgtcgccctgcatgatgtgttgtcttgtacacgtggcaataaggaagccacgt 23774350  T
Q  610 gt 611  Q
    ||    
T  23774351 gt 23774352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 404 - 606
Target Start/End: Complemental strand, 31887582 - 31887380
Alignment:
Q  404 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 503  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||| ||||||   || ||||||||||||||| |||| ||  |||||||||||||||    
T  31887582 aaaaaggagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtca 31887483  T
Q  504 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaag 603  Q
    || ||| || ||||||||||||||||  | | |||||||||||||||||||  ||||||||| ||||||||| |||| ||||| |||||||| |||||||    
T  31887482 gatgtctatcaaaaaggtccctccgtccaagtgctccgttagccatgctgatttgtcgccttgcatgctgtgttgtcttgtacacgtggcaaaaaggaag 31887383  T
Q  604 cca 606  Q
    |||    
T  31887382 cca 31887380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 45257344 - 45257143
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||  |||||||||||||  |||| |||| ||  | |||||||||||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtc 45257245  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||||||||| ||||||||||  | | |||||||||| |||||||||||| |||| | |||| |||| |||| ||||| ||||||||||| ||||||||||    
T  45257244 cataaaaaatgtccctccgtccaagtgctccgttagtcatgctgacatgccgccctgcatgttgtgttgtcttgtacacgtggcaagaatgaagccacgt 45257145  T
Q  610 gt 611  Q
    ||    
T  45257144 gt 45257143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 48633877 - 48634082
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||| |||| ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  48633877 gagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 48633976  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtg----ctgtcctgtacgcgtggcaagaaggaagcc 605  Q
    ||| ||||||||||||||||  | | ||||||||||||||| |||  ||||||| | |||| ||||     |||| ||||| |||||||| |||||||||    
T  48633977 catcaaaaaggtccctccgtccaagtgctccgttagccatgttgatctgtcgccctgcatgatgtgttgtttgtcttgtacacgtggcaaaaaggaagcc 48634076  T
Q  606 acgtgt 611  Q
    ||||||    
T  48634077 acgtgt 48634082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 33113304 - 33113104
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||| |  ||||||||||||||||||| |||| ||  ||||| |||||||||||||||    
T  33113304 gagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtc 33113205  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||| || | | |||||||||||||| ||  |||||||   |||| || |||||| ||||| |||||||| |||||||||||||    
T  33113204 catcaaaaaggtccctccgtcaa-gtgatccgttagccatgccgatctgtcgcccagcatgttgcgctgtcttgtacacgtggcaaaaaggaagccacgt 33113106  T
Q  610 gt 611  Q
    ||    
T  33113105 gt 33113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 410 - 591
Target Start/End: Complemental strand, 40509035 - 40508854
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| || |||| |||||||||||||||||    
T  40509035 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtc 40508936  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtg 591  Q
    ||| ||||| ||||||||||  | | | |||||||| | ||||||  ||||||| | |||| |||| |||| ||||| ||||    
T  40508935 catcaaaaatgtccctccgtccaagtgttccgttagtcgtgctgatctgtcgccctgcatgttgtgttgtcatgtacacgtg 40508854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 611
Target Start/End: Complemental strand, 33852792 - 33852593
Alignment:
Q  412 gtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtcca 511  Q
    ||||| ||| ||||| |||| |||||||| ||| || || ||||||  ||||||||||||||||||| ||||||| ||  |||||||| |||||||||||    
T  33852792 gtgaatcattaaatttgtccttgaatttttacgggttggtcaaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtcca 33852693  T
Q  512 taaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    | ||||||||||||| ||  | | ||||||||||||||| |||||||||||| | |||| |||| |||| ||||  ||||||||||||||||||||||||    
T  33852692 tcaaaaaggtccctctgtccaagtgctccgttagccatggtgacatgtcgccctgcatgttgtgttgtcttgtagacgtggcaagaaggaagccacgtgt 33852593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 40998515 - 40998606
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgt 40998606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 24383017 - 24382816
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||| |||| |||||||| ||| ||||||||||||  ||| ||||||||| ||||| |||| ||  ||| || ||||||||||||||    
T  24383017 gagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgtcagacgtc 24382918  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | |   ||||||||||||||||| |||||||| | |||| |||| |||| | ||  || ||||| |||||||||||||    
T  24382917 catcaaaaaggtccctccgtccaagtcatccgttagccatgctgatatgtcgccctgcatgttgtgttgtcttatatacggggcaaaaaggaagccacgt 24382818  T
Q  610 gt 611  Q
    ||    
T  24382817 gt 24382816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 410 - 554
Target Start/End: Complemental strand, 45898472 - 45898328
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| || |||||| ||||||||||||| |||| ||  ||| |||||||||||||||||    
T  45898472 gagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtc 45898373  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctga 554  Q
     || ||||||||||||||||  | |  ||||||||||| ||||||    
T  45898372 tatcaaaaaggtccctccgtccaagtcctccgttagccttgctga 45898328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 410 - 607
Target Start/End: Complemental strand, 2977453 - 2977256
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||||||||||| |||||||| |||  |||||||||||  ||||| ||||||||||||| ||||||   ||||| ||||||||| |||||    
T  2977453 gagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtc 2977354  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    ||| |||||||||| ||||   | | ||||||||||| |||||||  ||||||| | |||||| || ||||   ||| ||||||||||||||| ||||    
T  2977353 catcaaaaaggtccatccgcccaagtgctccgttagcgatgctgatttgtcgccctgcatgctatgttgtctaatacacgtggcaagaaggaaaccac 2977256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 40508493 - 40508584
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgt 40508584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 410 - 550
Target Start/End: Complemental strand, 39641963 - 39641823
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||| |||| |||||||| ||| ||||||||||||  || ||||||||| | || | |||| ||  ||| | ||||||||||||||     
T  39641963 gagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattattcaaagtatcaacttagtccttaaatttgtcagacgtt 39641864  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatg 550  Q
    ||||||||||||||||||||| | |  ||||||||||||||    
T  39641863 cataaaaaaggtccctccgttcaagtactccgttagccatg 39641823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 410 - 526
Target Start/End: Complemental strand, 51454374 - 51454258
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||  | ||||||||||||||||| |||| ||  ||  ||||||||||| || ||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgtcaaacatc 51454275  T
Q  510 cataaaaaaggtccctc 526  Q
    ||||||||| |||||||    
T  51454274 cataaaaaatgtccctc 51454258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 1847736 - 1847645
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| ||||||||| |||| |||||||||||| ||||||||||||  |||||||||||||| |||| ||||||| ||||||||||||||    
T  1847736 gagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgt 1847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 33111841 - 33111932
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||||||||||||||||  |||| ||||||  ||||||||||||||||||| ||||||| ||||||||||||||    
T  33111841 gagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgt 33111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 45897050 - 45897141
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||| |||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  45897050 gagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45897141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 48635464 - 48635373
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||||||||||||||||  |||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 48635373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 493 - 611
Target Start/End: Original strand, 1845867 - 1845985
Alignment:
Q  493 tgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtgg 592  Q
    |||||||| ||||||||||| ||||| ||||||||||  | | ||||||||| ||||| ||| |||||||| | |||| |||| |||||| ||| |||||    
T  1845867 tgaatttgacagacgtccatcaaaaacgtccctccgtccaagtgctccgttaaccatgttgatatgtcgccctgcatgatgtgatgtcctatacacgtgg 1845966  T
Q  593 caagaaggaagccacgtgt 611  Q
    ||| |||||||||||||||    
T  1845967 caaaaaggaagccacgtgt 1845985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 401 - 501
Target Start/End: Original strand, 23887189 - 23887289
Alignment:
Q  401 tttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttg 500  Q
    |||| ||| ||||||| |||||| ||||||| |||||||| | | |||||| || || |||||||||||||||||||| ||||||| |||||||||||||    
T  23887189 tttataaaagagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttg 23887288  T
Q  501 t 501  Q
    |    
T  23887289 t 23887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 501
Target Start/End: Original strand, 33850981 - 33851073
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||| |||||| ||||| |||||||||||||| ||||| ||| || ||||||||||||| |||||| ||||||| ||| ||||||||||    
T  33850981 ggagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgt 33851073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 420 - 611
Target Start/End: Complemental strand, 53190893 - 53190703
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 53190794  T
Q  520 gtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||  |   ||||||||||   || |||| |||| |||| |||| |||| |||| ||||| |||| ||| |||| ||||||||||    
T  53190793 gtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgt 53190703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 27899215 - 27899106
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||| |||| | |||| |||||||| || ||||  |||||||||||  |||||||||||||||| |    
T  27899215 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccataaaaatg 27899116  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  27899115 gtccctccgt 27899106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 486
Target Start/End: Original strand, 18428757 - 18428825
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaattt 486  Q
    |||||| |||||||||||||||| ||| ||||| ||| || |||||||||||||||||||| |||||||    
T  18428757 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaattt 18428825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 2975460 - 2975551
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| || ||||||||||| |||||||| |||  || || |||||  ||||||||| ||||||||| ||||||| ||||||||||||||    
T  2975460 gagtgaatcaccaaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaatttgt 2975551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 529
Target Start/End: Original strand, 21348760 - 21348842
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    ||||||||||| |||| | |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  21348760 tcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 21348842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 24381758 - 24381820
Alignment:
Q  424 attcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaattt 486  Q
    |||||||| |||||||| |||  |||||||||||  ||||||||||||||||||| |||||||    
T  24381758 attcgtccttgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaattt 24381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 37865433 - 37865475
Alignment:
Q  459 gtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  37865433 gtccctcaattatgcgaaatatcaatttaatccctgaatttgt 37865475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 2226286 - 2226177
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||| ||| |||| |    
T  2226286 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 2226187  T
Q  520 gtccctccgt 529  Q
     |||||||||    
T  2226186 ttccctccgt 2226177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 30600052 - 30599943
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| | |||||| ||   ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||   ||||||| || |||| |    
T  30600052 tcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatg 30599953  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  30599952 gtccctccgt 30599943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 33051556 - 33051465
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||||| ||||| || || ||  ||||| | |||||| |||| ||| |||| |||||||| |||||||||||||    
T  33051556 gagtgaatcatcaacttcgtccctaaatttgcaagcatcaaccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaatttgt 33051465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 41944576 - 41944635
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaatt 469  Q
    |||| ||||||||| |||||||||||||||||| |  ||||||||||| ||||| |||||    
T  41944576 gagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatt 41944635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 529
Target Start/End: Complemental strand, 35905819 - 35905737
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||| ||| |||| |||||||||||    
T  35905819 tcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgt 35905737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 49494477 - 49494567
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||| ||||||||||||||| || || ||   |||| | |||||  |||| | |||||| ||||||||||||||||||||||    
T  49494477 agtgaatcatcaacttcgtccctgaatttgcaagcatcaatcaaaatcgtccccaaattttacgaaatatcaatttcatccctgaatttgt 49494567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 41977760 - 41977869
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||  |||||| ||||  ||||||| |||| ||  |||||||||||  ||||||||| | |||| |    
T  41977760 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatg 41977859  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  41977860 gtccctccgt 41977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 51684620 - 51684729
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| ||||||||||    || ||||||||  ||||| |||| ||| |||| || ||||  ||| |||||||  ||||||||||| |||| |    
T  51684620 tcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtccatcaaaatg 51684719  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  51684720 gtccctccgt 51684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 54898447 - 54898556
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||| ||| |||| |    
T  54898447 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 54898546  T
Q  520 gtccctccgt 529  Q
    ||| ||||||    
T  54898547 gtctctccgt 54898556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 501
Target Start/End: Original strand, 45255486 - 45255574
Alignment:
Q  413 tgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||| |||||| |||||||||||||||| |||  |||| ||| ||  || ||||||||||| |||| | | ||| ||||||||||||||    
T  45255486 tgaatcatcaacttcgtccctgaatttttacggatcggtcaacttcatcactcaattatgcaaaatattactttaatccctgaatttgt 45255574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 3e-93; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 47269580 - 47269379
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  47269580 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaaacgtc 47269481  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||    
T  47269480 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgtctggcatggtgtgctgtcctgtacgcgtggcaagaaggaagccacgt 47269381  T
Q  610 gt 611  Q
    ||    
T  47269380 gt 47269379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 403 - 611
Target Start/End: Original strand, 27940601 - 27940809
Alignment:
Q  403 taaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtc 502  Q
    |||||| |||||||||||||| || ||||||||||||||||  || || |||||| |||||||||||||||||||| ||||||| |||| ||||||| ||    
T  27940601 taaaaacgagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatc 27940700  T
Q  503 agacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaa 602  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||| |||||||||||||||||||||    
T  27940701 agacgtccatcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtaaccttgcatgatgtgctgtcttgtacgcgtggcaagaaggaa 27940800  T
Q  603 gccacgtgt 611  Q
    |||||||||    
T  27940801 gccacgtgt 27940809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 404 - 611
Target Start/End: Complemental strand, 36895640 - 36895433
Alignment:
Q  404 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 503  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| || |||| ||||||||||||||| |||| ||  |||||||||||||||    
T  36895640 aaaaatgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtca 36895541  T
Q  504 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaag 603  Q
    ||||||||| |||||||||||| |||  | | |||||||||||||||||||  ||||| ||| |||| |||| |||| ||||||||||||||||||||||    
T  36895540 gacgtccatcaaaaaggtcccttcgtccaagtgctccgttagccatgctgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaag 36895441  T
Q  604 ccacgtgt 611  Q
    ||||||||    
T  36895440 ccacgtgt 36895433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 46638931 - 46638730
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||| |||| ||  ||| |||||||||||||||||    
T  46638931 gagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtc 46638832  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||  ||||||||||||||||  | | |||||||||||||||||||  ||||||||| |||| |||| |||| |||||||||||||| |||||||||||||    
T  46638831 caccaaaaaggtccctccgtccaagtgctccgttagccatgctgatctgtcgccttgcatgttgtgttgtcttgtacgcgtggcaaaaaggaagccacgt 46638732  T
Q  610 gt 611  Q
    ||    
T  46638731 gt 46638730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 410 - 607
Target Start/End: Original strand, 42134482 - 42134679
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||| |  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 42134581  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    ||| ||||||||||||||||  | | ||||||||||||||| ||||||||| || | ||||||||| |||| ||||| ||||||||||||||||||||    
T  42134582 catcaaaaaggtccctccgtccaagtgctccgttagccatgttgacatgtcaccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccac 42134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 31801633 - 31801834
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||| ||| ||||||||||||||| ||||||||| |||||| ||| || |||||||||||||||||||| |||| ||  ||| | ||||||| |||||||    
T  31801633 gagtaaacaatcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtc 31801732  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | |||||||||||||||||||  ||||| ||| |||| |||| |||| |||||||||||||||||||||| |||||    
T  31801733 catcaaaaaggtccctccgtccaagtgctccgttagccatgctgatttgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagtcacgt 31801832  T
Q  610 gt 611  Q
    ||    
T  31801833 gt 31801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 44157433 - 44157634
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||| |||||| | |||||||||| ||||||||||||  |||||||||||||| |||| |||| ||  ||||||||||||| |||||||    
T  44157433 gagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtc 44157532  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||||||||| |||| |||||  | | ||||||| ||||||  |||||||||||| | |||| |||| |||| ||||| ||||||||||||||||||||||    
T  44157533 cataaaaaaagtccttccgtctaagtgctccgtcagccatagtgacatgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgt 44157632  T
Q  610 gt 611  Q
    ||    
T  44157633 gt 44157634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 409 - 611
Target Start/End: Complemental strand, 35480100 - 35479899
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 508  Q
    ||||||||||||||| ||||||| ||||||||||||  || ||||||||  ||||||||||||||||||| |||| || |||  ||||||||||||||||    
T  35480100 ggagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgt 35480001  T
Q  509 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacg 608  Q
    |||| |||||||||| |||||  | | |||| ||||| ||||||||  ||||||| | |||||| || |||| ||||||||||||||||| |||||||||    
T  35480000 ccatcaaaaaggtccttccgtccaagtgctctgttag-catgctgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaaagaagccacg 35479902  T
Q  609 tgt 611  Q
    |||    
T  35479901 tgt 35479899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 460 - 611
Target Start/End: Complemental strand, 45381058 - 45380907
Alignment:
Q  460 tccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgt 559  Q
    ||||||||||||||||||| |||| ||  | | |||||||||||||||||||| |||||||| |||||||  | | ||||||||||||||| ||||||||    
T  45381058 tccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaagtgctccgttagccatggtgacatgt 45380959  T
Q  560 cgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    |||| | ||||||||| |||| ||||| ||||||||||||||||||||||||    
T  45380958 cgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgt 45380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 47264124 - 47264215
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47264124 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 47264215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 33685372 - 33685172
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||||||||||||||| ||||||| |||  ||||||||||| |  ||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttaatcattgaatttgtcacatctc 33685273  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    |||  ||||| ||||||| |  | | |||||||||||||||| ||  ||||||| | |||| || | |||| ||||| ||||||||||||||||||||||    
T  33685272 cat-caaaagatccctccatccaagtgctccgttagccatgccgatgtgtcgccctgcatgttgagttgtcttgtacacgtggcaagaaggaagccacgt 33685174  T
Q  610 gt 611  Q
    ||    
T  33685173 gt 33685172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 18184067 - 18183867
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||  |||||||| |||  ||||||||| |  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18183968  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||| |||||| | | || | |||||||||||||||||||  ||||| |   |||| |||| |||| ||||| |||||||| || ||||||||||    
T  18183967 catcaaaaatgtcccttcatcaa-gtgctccgttagccatgctgatttgtcgtccagcatgttgtgttgtcttgtacacgtggcaaaaaagaagccacgt 18183869  T
Q  610 gt 611  Q
    ||    
T  18183868 gt 18183867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 410 - 499
Target Start/End: Original strand, 35478087 - 35478176
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    ||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 404 - 501
Target Start/End: Original strand, 45379079 - 45379176
Alignment:
Q  404 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||||| || |||||| ||||||||||||| ||||||| |||||| |||||||    
T  45379079 aaaaaggagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgt 45379176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 405 - 501
Target Start/End: Complemental strand, 31803796 - 31803700
Alignment:
Q  405 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||| ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||||||||| ||||||| ||||||||||||||    
T  31803796 aaaatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 31803700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 5784958 - 5784867
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 5784867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 11152545 - 11152636
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||    
T  11152545 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 11152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 408 - 501
Target Start/End: Complemental strand, 27952593 - 27952500
Alignment:
Q  408 aggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| || |||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  27952593 aggagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 27952500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 611
Target Start/End: Original strand, 6575271 - 6575391
Alignment:
Q  489 tccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgc 588  Q
    |||||||||||||||||| || || |||||||||| ||||| || | |||| ||  |||||||||| |||||| | | |||||| || |||| |||||||    
T  6575271 tccctgaatttgtcagacatctatcaaaaaggtccttccgtcaaagtgctctgt--gccatgctgatatgtcgtcatgcatgctttgttgtcttgtacgc 6575368  T
Q  589 gtggcaagaaggaagccacgtgt 611  Q
    |||||||||||||||||||||||    
T  6575369 gtggcaagaaggaagccacgtgt 6575391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 18180500 - 18180591
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| | |||| || |||||||||||||||||  |||||||||||  ||||||||||||||||||| ||||||| || |||||||||||    
T  18180500 gagtgaatcctcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaatttaattcctgaatttgt 18180591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 33679259 - 33679350
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || |||| |||||||| ||| ||| |||||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 33679350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 499
Target Start/End: Complemental strand, 6577195 - 6577107
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    |||||| |||||| |||||||||||  ||| | | |||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  6577195 agtgaatcatcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaatttaatccctgaattt 6577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 46636766 - 46636856
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||| |||||| ||||||||||||| |||||| || || |||| ||||||||||||||| ||||||| ||  ||||||||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttcacgggtcggctaacttcgtccttcaattatgcgaaatatcaatttaatttctgaatttgt 46636856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 44159385 - 44159294
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||   |||| ||| || |||||| |||||||| |||| ||||||| || |||||||||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgt 44159294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 4856080 - 4855971
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||  |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||| |    
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 4855981  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  4855980 gtccctccgt 4855971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 611
Target Start/End: Complemental strand, 31238582 - 31238418
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagc 546  Q
    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| ||||| || ||  |   ||||||||||     
T  31238582 tcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccatctgtccaaaagctccgttagt 31238483  T
Q  547 catgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
      || |||| ||||  ||| ||||||||| |||| ||||| |||| ||| |||| ||||||||||    
T  31238482 ggtgatgacgtgtcctcttccatgctgtgttgtcatgtacacgtgtcaacaaggcagccacgtgt 31238418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 2869589 - 2869698
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| ||||||||||    |||| |||||| |||||| |||| |||||||| || ||||  || || |||||  ||||||||||| |||| |    
T  2869589 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccatcaaaatg 2869688  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  2869689 gtccctccgt 2869698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 5783358 - 5783411
Alignment:
Q  404 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaatt 457  Q
    ||||| |||||||||||||| |||||||||||||||| | | ||||||||||||    
T  5783358 aaaaacgagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaatt 5783411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 34778252 - 34778143
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||  |||||| |||| |||||||| |||| ||  |||||||||||  |||| |||||| |||| |    
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatg 34778153  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  34778152 gtccctccgt 34778143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 479
Target Start/End: Original strand, 36894830 - 36894891
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatt 479  Q
    |||||| |||||||||||||||| ||| ||||||||| || |||  ||||||||||||||||    
T  36894830 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcattcaattatgcgaaatt 36894891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 501
Target Start/End: Complemental strand, 42136336 - 42136244
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||| |||||| ||||| ||| |||||| | |  |||| ||| || |||| | ||||||||||||| ||||||| ||||||||||||||    
T  42136336 ggagtgaatcatcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgt 42136244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 611
Target Start/End: Complemental strand, 6818792 - 6818601
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||| | ||||||  |||  || |||| || ||||  |||||||||||  ||||||||||| |||| |    
T  6818792 tcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 6818693  T
Q  520 gtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||  |   ||||||||||   || |||||||||  ||| |||| |||| |||| ||||| |||| ||| |||| ||||||||||    
T  6818692 gtccctccgtccaaaagctccgttagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgt 6818601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 611
Target Start/End: Complemental strand, 25278482 - 25278291
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    |||| |||||| |||||| |||| ||||||||  | ||||  ||| |||||||  || |||||||| |||| |    
T  25278482 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtccatcaaaatg 25278383  T
Q  520 gtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||  |   ||||||||||   || |||| ||||  ||| |||| ||||||||| ||||| |||| ||| |||| ||||||||||    
T  25278382 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgctgtcatgtacacgtgtcaacaaggcagccacgtgt 25278291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 529
Target Start/End: Original strand, 51121905 - 51122024
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||| ||||||| ||||||| || || || |||||  | || ||  |||| ||| |||| |||||||| ||||||||||| ||  |||||    
T  51121905 gagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaacatcgttcccaaattttgcaaaatatcaatttcgtccctgaatttctctcacgtc 51122004  T
Q  510 cataaaaaaggtccctccgt 529  Q
    ||| |||| |||||||||||    
T  51122005 catcaaaatggtccctccgt 51122024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 514
Target Start/End: Complemental strand, 25279067 - 25278973
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataa 514  Q
    |||||||||||| ||||||||||    || |||||||| || ||| |||| |||||||| || ||||  |||||||||||  |||||||||||||    
T  25279067 tcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtccataa 25278973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 2e-81; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 8423405 - 8423204
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 8423306  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  8423305 aatcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgt 8423206  T
Q  610 gt 611  Q
    ||    
T  8423205 gt 8423204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 400 - 611
Target Start/End: Complemental strand, 35344423 - 35344213
Alignment:
Q  400 ttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    |||||||||| ||||||||||||| || ||||| ||||||||||| ||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  35344423 ttttaaaaag-agtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 35344325  T
Q  500 gtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaag 599  Q
     | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  35344324 ataagacgtccatcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgttgccttgcatgctgtgctgtcttgtacgcgtggcaagaag 35344225  T
Q  600 gaagccacgtgt 611  Q
    ||||||||||||    
T  35344224 gaagccacgtgt 35344213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 46996826 - 46996625
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||  || ||||||||||||||||||    
T  46996826 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtc 46996727  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | ||||||||||| |||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  46996726 catcaaaaaggtccctccgtccaagtgctccgttagcgatgctgatctgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgt 46996627  T
Q  610 gt 611  Q
    ||    
T  46996626 gt 46996625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 46812706 - 46812505
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| ||||||| |||||||| ||| ||||||||||||  ||||||||||| | ||||| |||||||  ||||| |||||||||||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtc 46812607  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||  |||||  | | |||| |||||||||||||| |||||||| | ||||||||| |||| |||||| |||||||||||||||||||||    
T  46812606 catcaaaaaggtcattccgtccaagtgctctgttagccatgctgatatgtcgccctgcatgctgtgttgtcttgtacgtgtggcaagaaggaagccacgt 46812507  T
Q  610 gt 611  Q
    ||    
T  46812506 gt 46812505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 23953805 - 23954006
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| | |||||| ||| |||||  ||||| |||| ||||||||||||||| |||| ||  ||| |||||||||||||||||    
T  23953805 gagtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtc 23953904  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
     || ||||||||||||||||  | | ||||||||||||||||||| |||||||| | |||| |||| |||| ||||| |||||||| |||||||||||||    
T  23953905 aatcaaaaaggtccctccgtccaagtgctccgttagccatgctgatatgtcgccatgcatgttgtgttgtcttgtacacgtggcaaaaaggaagccacgt 23954004  T
Q  610 gt 611  Q
    ||    
T  23954005 gt 23954006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 47341810 - 47341605
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||| |||| ||  ||||||||||||||||||||     
T  47341810 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtt 47341711  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgc----ctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagcc 605  Q
     || ||||||||  ||||||  | | |||||||||||||||  ||||||||||    | | ||||||||| |||| ||||| ||||||||||||||||||    
T  47341710 aatcaaaaaggtatctccgtccaagtgctccgttagccatggggacatgtcgccctgcatgcatgctgtgttgtcttgtacacgtggcaagaaggaagcc 47341611  T
Q  606 acgtgt 611  Q
    ||||||    
T  47341610 acgtgt 47341605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 407 - 608
Target Start/End: Original strand, 2167476 - 2167677
Alignment:
Q  407 aaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagac 506  Q
    |||||||||||||||||||  |||| ||||||   ||| ||||| ||||||  ||||||||||||||||||| |||| ||  ||||||||||||||||||    
T  2167476 aaggagtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 2167575  T
Q  507 gtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagcca 606  Q
    | |||| ||||||||||||||||  | | ||||| |||||||||||||| |||| || | |||| |||| |||| ||||| |||||||| ||| ||||||    
T  2167576 gcccatcaaaaaggtccctccgtccaagtgctccattagccatgctgacgtgtcaccctgcatgatgtgttgtcttgtacacgtggcaaaaagaaagcca 2167675  T
Q  607 cg 608  Q
    ||    
T  2167676 cg 2167677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 523
Target Start/End: Complemental strand, 38613605 - 38613492
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 38613506  T
Q  510 cataaaaaaggtcc 523  Q
    ||||||||| ||||    
T  38613505 cataaaaaatgtcc 38613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 33038921 - 33038720
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||||||||||| |||||||| | | ||||| ||||||  ||||||||||||||||||| |||| ||  ||||||||||| |||||||||    
T  33038921 gagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtc 33038822  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | |||| ||||| |||| |||  ||||| | | |||| |||| |||| | ||| |||| |||||||||||||| ||    
T  33038821 catcaaaaaggtccctccgtccaagtgctctgttaggcatgttgatctgtcgtcctgcatgttgtgttgtcttatacacgtgtcaagaaggaagccatgt 33038722  T
Q  610 gt 611  Q
    ||    
T  33038721 gt 33038720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 501
Target Start/End: Original strand, 35342410 - 35342516
Alignment:
Q  395 cttagttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctg 494  Q
    ||||||||| |||||||||||| |||||| || ||||||||||| | ||| |||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  35342410 cttagtttttaaaaggagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctg 35342509  T
Q  495 aatttgt 501  Q
    |||||||    
T  35342510 aatttgt 35342516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 46810707 - 46810796
Alignment:
Q  412 gtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgt 46810796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 405 - 611
Target Start/End: Original strand, 2492322 - 2492527
Alignment:
Q  405 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcag 504  Q
    |||| |||| |||||||||||||||||  ||||||| ||| ||||| |||| |  ||| ||||||||||||||| |||| || || | ||||||| |||     
T  2492322 aaaaagagtaaaccatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattatgcgaaatatcaacttaatacttgaatttttcaa 2492421  T
Q  505 acgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagc 604  Q
    |||||||||||||| || |||||||| | | ||||||||||||||| |||  | |||||   |||||| ||||||| ||||| |||||||| |||||||     
T  2492422 acgtccataaaaaa-gttcctccgttcaagtgctccgttagccatgttgatctatcgcccaacatgctctgctgtcttgtacacgtggcaaaaaggaagt 2492520  T
Q  605 cacgtgt 611  Q
    |||||||    
T  2492521 cacgtgt 2492527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 410 - 554
Target Start/End: Complemental strand, 38615035 - 38614892
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||||||||||| | |||||||||| ||||  ||||||  ||||||||||||||||||| | || ||  |||||||||||||||||||||    
T  38615035 gagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgtcagacgtc 38614936  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctga 554  Q
    |||| |||| ||||||||||  | | |||| ||||||||||||||    
T  38614935 cata-aaaatgtccctccgtctaagtgctctgttagccatgctga 38614892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 4321038 - 4321129
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||||| ||||||||||||| ||||||| ||||||||||||||    
T  4321038 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 4321129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 8421416 - 8421507
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  8421416 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 8421507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 30108565 - 30108656
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 30108656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 46994660 - 46994751
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||||||||| ||||||| ||||||||||||||    
T  46994660 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 46994751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 409 - 611
Target Start/End: Original strand, 27955369 - 27955571
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 508  Q
    |||||||| |||||||||||||| |||||||| |||  || || |||||  |||||||||| | |||||| |||| || ||  |||||||||||||||||    
T  27955369 ggagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgt 27955468  T
Q  509 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacg 608  Q
    |||| ||| ||||||||||||  | | |||||||||| ||||||||  |||||   | |||| |||| |||| ||||| | |||||| |||||||||| |    
T  27955469 ccatcaaagaggtccctccgtccaagtgctccgttagtcatgctgatgtgtcgtgctgcatgttgtgttgtcttgtacacttggcaacaaggaagccatg 27955568  T
Q  609 tgt 611  Q
    |||    
T  27955569 tgt 27955571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 410 - 607
Target Start/End: Original strand, 40784346 - 40784543
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||| | |||||||| ||||||| || |||||  ||| ||||||||||||||| |||| ||  ||  |||||||||||||| ||    
T  40784346 gagtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtctttgaatttgtcagacatc 40784445  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    ||| ||||||||||||||||  |   || | ||||  ||||||||  ||||| | | |||| |||| |||| | ||| ||||||||||||||||||||    
T  40784446 catcaaaaaggtccctccgtccaaatgcgctgttaatcatgctgatctgtcgtcctgcatgttgtgttgtcttatacacgtggcaagaaggaagccac 40784543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 501
Target Start/End: Complemental strand, 36762763 - 36762680
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgt 36762680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 45465275 - 45465184
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||| |||||||| ||| ||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  45465275 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 40785639 - 40785548
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||||||||  || |||||||||| ||||| ||||| | ||||||||||||||    
T  40785639 gagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgt 40785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 36756973 - 36756883
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||| ||||| |||||||||||| |  |||| ||||||||||||||||||||| ||||| ||||||| ||| ||||||||||    
T  36756973 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36756883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 36766497 - 36766407
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||| ||||| |||||||||||| |  |||| ||||||||||||||||||||| ||||| ||||||| ||| ||||||||||    
T  36766497 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36766407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 410 - 499
Target Start/End: Original strand, 33775408 - 33775497
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    ||||||| | |||| |||||||||||||||| ||| ||||| ||| || |||| ||||||||||||||| ||||||| ||||||||||||    
T  33775408 gagtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 33775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 410 - 512
Target Start/End: Original strand, 45463670 - 45463772
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||| ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  45463670 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 45463769  T
Q  510 cat 512  Q
    |||    
T  45463770 cat 45463772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 611
Target Start/End: Complemental strand, 39859343 - 39859152
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    |||||||||||||||||| |||| |||||||| || ||||  ||| |||||||  ||||||||| | |||| |    
T  39859343 tcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatg 39859244  T
Q  520 gtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||  |   ||||||||||   || |||| ||||  ||| ||||||||| |||| ||||| |||| ||| |||  ||||||||||    
T  39859243 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgt 39859152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 3690151 - 3690241
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||| ||||||| |||||||| ||   |||||||| || || ||||||||||||||||| ||||||| |||| |||||||||    
T  3690151 agtgaatcatcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaatttaatccttgaatttgt 3690241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 463
Target Start/End: Complemental strand, 30109789 - 30109737
Alignment:
Q  411 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 463  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  30109789 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 30109737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 501
Target Start/End: Original strand, 33037701 - 33037785
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa-tttcatccctgaatttgt 501  Q
    |||||| ||||||| |||||||| | | ||||||||||||  ||||||||||||| ||||| |||| ||| ||||||||||||||    
T  33037701 catcaagttcgtccttgaatttttatgtgtcggccaaattcatccctcaattatgtgaaatatcaattttaatccctgaatttgt 33037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 501
Target Start/End: Original strand, 47339784 - 47339867
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||||||||||||  ||| ||||||||| || ||| |||||| ||||||||| ||||||| |||  |||||||||    
T  47339784 catcaacttcgtccctgaatttctacgggtcggccaacttcgtctctcaatgatgcgaaatatcaatttaatctttgaatttgt 47339867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 611
Target Start/End: Original strand, 6602385 - 6602536
Alignment:
Q  460 tccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgt 559  Q
    ||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||  |   ||||||||||   || ||||||||    
T  6602385 tccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacatgt 6602484  T
Q  560 cgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    |   || ||||||||| |||| ||||| |||| |||  ||| ||||||||||    
T  6602485 ccttttgcatgctgtgttgtcatgtacacgtgtcaaccaggcagccacgtgt 6602536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 499
Target Start/End: Complemental strand, 13169762 - 13169683
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    |||||||||||| ||||||||||    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||    
T  13169762 tcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 611
Target Start/End: Complemental strand, 37796295 - 37796104
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    ||||||| |||| ||||||||||    || |||||||| ||||   |||| |||||||| || ||||  |||||||||||  | ||||||||| ||||      
T  37796295 tcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaata 37796196  T
Q  520 gtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||  |   ||||||||||| |||||||  ||||  ||| |||| |||| |||| | ||| |||| |||||||| ||||||||||    
T  37796195 gtccctccgtccataagctccgttagcgatgctgatgtgtcctcttgcatgttgtgttgtcttctacacgtgtcaagaaggcagccacgtgt 37796104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 525
Target Start/End: Complemental strand, 24228494 - 24228418
Alignment:
Q  449 ggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccct 525  Q
    ||||||||| |||||| |||| |||||||| || ||||  || ||||||||  ||||||||||| |||| |||||||    
T  24228494 ggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccct 24228418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 512
Target Start/End: Complemental strand, 29996628 - 29996536
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccat 512  Q
    |||||||||||| |||||||| |    |||| ||| || |||||| |||| |||||||| |||| || ||||||||||||  |||||||||||    
T  29996628 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtccat 29996536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 34777000 - 34776920
Alignment:
Q  449 ggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||||||||  | ||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  34777000 ggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 34776920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 150; Significance: 5e-79; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 6758 - 6557
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||| |||||||||||| |||||| ||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 6659  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  6658 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcaccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgt 6559  T
Q  610 gt 611  Q
    ||    
T  6558 gt 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 8e-72; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 410 - 603
Target Start/End: Complemental strand, 31201267 - 31201074
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 31201168  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaag 603  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||| |||||||||||||||||    
T  31201167 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgatgtgttgtcttgtatgcgtggcaagaaggaag 31201074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 42897898 - 42897697
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||| |||||||||||||| ||||| |||| ||  ||| |||||||||||||||||    
T  42897898 gagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtc 42897799  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | |||| ||||||||||||||  ||||| | | ||||||||| |||| ||||| ||||||||||||||||||||||    
T  42897798 catcaaaaaggtccctccgtccaagtgctctgttagccatgctgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgt 42897699  T
Q  610 gt 611  Q
    ||    
T  42897698 gt 42897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 1320617 - 1320818
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||| |||| | |||||||||| |||||| |||||  |||||||||||||| |||| |||| ||  |||||||||||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtc 1320716  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    |||||| ||||||| |||||  | | | ||||| ||||||| |||||||||||| | |||||| || |||| ||||| ||||||||||||||||||||||    
T  1320717 cataaataaggtccttccgtccaagtgttccgtcagccatggtgacatgtcgccctgcatgctatgttgtcttgtacacgtggcaagaaggaagccacgt 1320816  T
Q  610 gt 611  Q
    ||    
T  1320817 gt 1320818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 38882921 - 38882720
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| ||||||||||||  |||| ||||||  ||| |||| ||||||| || ||||||| ||||||||||||||||||||||    
T  38882921 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtc 38882822  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||||||||| ||||||||||  | | ||||||||||||||| |||  ||||| | | ||||||||| |||| ||||| |||||||| ||||||| |||||    
T  38882821 cataaaaaatgtccctccgtccaagtgctccgttagccatgttgatctgtcgtcctgcatgctgtgttgtcttgtactcgtggcaacaaggaagtcacgt 38882722  T
Q  610 gt 611  Q
    ||    
T  38882721 gt 38882720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 607
Target Start/End: Original strand, 8654491 - 8654696
Alignment:
Q  400 ttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    |||||||||| ||||||||||||| || ||| ||||||||| ||| ||||| |||||| || ||||||||||||||||| ||| ||| || | |||||||    
T  8654491 ttttaaaaag-agtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatca-tttaattcttgaattt 8654588  T
Q  500 gtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaag 599  Q
     |||||||||||| |||| |||||||||||  | | |||||||||||||||||||||||||||| | |||||  || |||| ||||| ||||||||||||    
T  8654589 atcagacgtccatcaaaagggtccctccgtccaagtgctccgttagccatgctgacatgtcgccctgcatgcaatgttgtcttgtacacgtggcaagaag 8654688  T
Q  600 gaagccac 607  Q
    ||||||||    
T  8654689 gaagccac 8654696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 37526147 - 37525946
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||  | | ||||||||||||||| |||| ||  ||||||||||| |||||| ||    
T  37526147 gagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacatc 37526048  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | || | ||||| |||| |||  ||||| | |  ||| |||| |||| | ||| ||||||||||||||||||||||    
T  37526047 catcaaaaaggtccctccgtccaagtgcgctgttagtcatgttgatctgtcgtcctgtatgttgtgttgtcttatacacgtggcaagaaggaagccacgt 37525948  T
Q  610 gt 611  Q
    ||    
T  37525947 gt 37525946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 410 - 529
Target Start/End: Original strand, 31821418 - 31821537
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||| |||| ||  |||| |||||| |||||||||    
T  31821418 gagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtc 31821517  T
Q  510 cataaaaaaggtccctccgt 529  Q
    ||| ||||||||||||||||    
T  31821518 catcaaaaaggtccctccgt 31821537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 404 - 611
Target Start/End: Original strand, 32822355 - 32822561
Alignment:
Q  404 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 503  Q
    ||||| |||||||||||||| ||||||| |||||||| | |  |||||||||||  ||||||||||||   |||| |||| ||  |||||||||||||||    
T  32822355 aaaaatgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtca 32822454  T
Q  504 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaag 603  Q
    || |||||| |||||||||| |||||  | | |||  ||||| ||||||||  ||||||| | |||||| || |||| ||||||||||||||||||||||    
T  32822455 gatgtccatcaaaaaggtccttccgtccaagtgctttgttag-catgctgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaaggaag 32822553  T
Q  604 ccacgtgt 611  Q
    ||||||||    
T  32822554 ccacgtgt 32822561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 410 - 599
Target Start/End: Complemental strand, 33160272 - 33160083
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||| ||||||||||||||||| |||||||||||  ||||||||||||  ||||||||||||| ||||| |||| ||  || |||||||||||||||| |    
T  33160272 gagtaaaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcc 33160173  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaag 599  Q
    ||| ||||||||||||||    | | |||| ||||||||||||||  ||||||| | |||| |||| |||| | ||| ||||||||||||    
T  33160172 catcaaaaaggtccctccacctaagtgctctgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaag 33160083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 447 - 611
Target Start/End: Complemental strand, 33750471 - 33750307
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagc 546  Q
    |||||||| || |||||||||||||||||||| |||| ||  |||||||||||||||||| | ||| ||||||||||||||||  | | |||| ||||||    
T  33750471 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaagtgctctgttagc 33750372  T
Q  547 catgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
     ||| |||  ||||| ||| |||| |||| |||| ||||||||||||||||||||||||| ||||    
T  33750371 gatgttgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccatgtgt 33750307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 410 - 604
Target Start/End: Complemental strand, 462494 - 462300
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||  |||||||| ||   |||||||||||  ||| ||||||||||||||| |||| ||  ||| ||||||||||| |||||    
T  462494 gagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtc 462395  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagc 604  Q
    ||| |||||| ||||||| |  | | |||| ||||||||||||||  ||||||| | |||| |||| | || | ||| |||||||||||||||||    
T  462394 catcaaaaagatccctccatccaagtgctctgttagccatgctgatttgtcgccgtgcatgttgtgttatcttatacacgtggcaagaaggaagc 462300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 418 - 501
Target Start/End: Complemental strand, 31823559 - 31823476
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||| |||||| |||||||    
T  31823559 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 31823476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 32824362 - 32824271
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || ||  ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  32824362 gagtgaatcatcaactttgtttctgaattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgt 32824271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 33748332 - 33748423
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||||||||| ||||||| || |||||||||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaattcctgaatttgt 33748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 509
Target Start/End: Complemental strand, 25373713 - 25373614
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||| ||| ||| ||||||||||||| |||||||||||  | ||||||||||||||||| |||| || || |||||||||||||||||||    
T  25373713 gagtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaacttaattcctgaatttgtcagacgtc 25373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 31199485 - 31199576
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| || ||||||||||| ||||| |||||||||||| |||||| ||||||| ||||| ||||||| ||||||||||||||    
T  31199485 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgt 31199576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 40019156 - 40019247
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||  |||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  40019156 gagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40019247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 24526911 - 24526987
Alignment:
Q  425 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||| ||||| ||||||| ||||||||||||||    
T  24526911 ttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaatttgt 24526987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 501
Target Start/End: Original strand, 461184 - 461267
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| ||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||  |||||| ||||||||||||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgt 461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 509
Target Start/End: Complemental strand, 25707392 - 25707293
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||| ||| ||| | |||||| |||| |||||||||||  ||||||||||||||||||| |||| || |||||||||||||| |||||||    
T  25707392 gagtgaatcatcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaatttgtgagacgtc 25707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 484
Target Start/End: Original strand, 38881422 - 38881502
Alignment:
Q  404 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaat 484  Q
    |||||| |||||| |||||||||||||| ||||||||||||  || ||||||||  ||||||||||||||||||| |||||    
T  38881422 aaaaagaagtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaat 38881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 433 - 501
Target Start/End: Original strand, 42894799 - 42894867
Alignment:
Q  433 tgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||| |||| ||||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  42894799 tgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 42894867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 410 - 529
Target Start/End: Original strand, 9184383 - 9184502
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||| |||||| ||||||| ||||||| ||||  ||||||||||| ||| | ||| || ||||||| |||| ||  |||||||||||||||||||||    
T  9184383 gagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgtc 9184482  T
Q  510 cataaaaaaggtccctccgt 529  Q
     ||  ||| |||||||||||    
T  9184483 gatcgaaatggtccctccgt 9184502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 447 - 611
Target Start/End: Complemental strand, 8609894 - 8609731
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagc 546  Q
    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||  |   ||||||||||     
T  8609894 tcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 8609795  T
Q  547 catgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
      || |||| |||| |||| ||||||||| |||| ||||| |||| | | |||| ||||||||||    
T  8609794 ggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgt 8609731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 13282488 - 13282597
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  || |||||||| |||| |    
T  13282488 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 13282587  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  13282588 gtccctccgt 13282597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 28433834 - 28433738
Alignment:
Q  416 accatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccat 512  Q
    |||||||| |||||||||||||||||| |  ||||||||||| |||||||||||   |||||| ||||  |  |||||||||||||  |||||||||    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccat 28433738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 611
Target Start/End: Complemental strand, 13108470 - 13108280
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||| ||||  |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||| |    
T  13108470 tcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 13108371  T
Q  520 gtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||  |   ||| ||||||   || |||| |||| |||| ||||||||| |||| ||||| |||| ||| |||| ||||||||||    
T  13108370 gtccctccgtccaaaagcttcgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgt 13108280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 33368759 - 33368850
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||||||||||  |||||||| |||  |||| | ||||  || |||||||||||||||| ||||||| |||| |||||||||    
T  33368759 gagtgaatcatcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaatttaatccttgaatttgt 33368850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 44620760 - 44620669
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| ||||||||||||||| || || |||| |||| | |||||  |||| ||| |||| |||||||| |||||||||||||    
T  44620760 gagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgt 44620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 9673266 - 9673190
Alignment:
Q  453 aaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    ||||| |||||| |||| || ||||| || |||| ||||||||||||  ||||||||||| |||| |||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 9673190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 611
Target Start/End: Original strand, 38547265 - 38547428
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagc 546  Q
    ||||||||||  |||| | |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||| ||||||||| |  |   ||||||||||     
T  38547265 tcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagt 38547364  T
Q  547 catgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
      || |||| |||| |||| ||||||||| |||| ||||| |||| ||| |||| ||||||||||    
T  38547365 ggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgt 38547428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 529
Target Start/End: Complemental strand, 26242418 - 26242339
Alignment:
Q  450 gccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||||||| |||||| |||| |||||||| || ||||  || ||||||||  ||||||||||| |||| |||||||||||    
T  26242418 gccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgt 26242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 1322356 - 1322314
Alignment:
Q  459 gtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||    
T  1322356 gtccctcaattatgcaaaatatcaatttaatccctgaatttgt 1322314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 27691164 - 27691273
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    |||||||| || |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||       
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcc 27691263  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  27691264 gtccctccgt 27691273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 41042689 - 41042609
Alignment:
Q  449 ggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    ||||||||| |||||| |||| || ||||| || ||||  |||||||||||  ||| ||||||| |||| |||||||||||    
T  41042689 ggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctccgt 41042609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 1e-55; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 410 - 607
Target Start/End: Original strand, 35395333 - 35395528
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||  | ||||||||||| |||||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtc 35395432  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccac 607  Q
    ||| ||||||||||||||||  | | |||| |||||||||||||| |||||||||| ||||  ||| |||| ||||||||||||||||||||||||||    
T  35395433 catcaaaaaggtccctccgtccaagtgctctgttagccatgctgatatgtcgccttgcatg--gtgttgtcttgtacgcgtggcaagaaggaagccac 35395528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 18728726 - 18728525
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| || |||||| ||||||||||||| |||| ||  |||||||||||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18728627  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | |||| ||||||| ||||||  |||| |||| ||||||||| |||| ||||| ||||||||||||||||||||||    
T  18728626 catcaaaaaggtccctccgtccaagtgctctgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgt 18728527  T
Q  610 gt 611  Q
    ||    
T  18728526 gt 18728525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 32087514 - 32087715
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| || |||||| ||||||||||||| |||| ||  ||||| ||||| |||||||||    
T  32087514 gagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtc 32087613  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| ||||||||||||||||  | | |||| ||||||| ||||||  | ||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  32087614 catcaaaaaggtccctccgtccaagtgctctgttagccttgctgatctatcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgt 32087713  T
Q  610 gt 611  Q
    ||    
T  32087714 gt 32087715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 409 - 611
Target Start/End: Original strand, 33256399 - 33256601
Alignment:
Q  409 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 508  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||  ||| ||||||||||||||| |||| || |||  ||||||||||||||||    
T  33256399 ggagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgt 33256498  T
Q  509 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacg 608  Q
    |||| ||||| ||||||||||  | |  ||||||||||| ||||||  |||| |||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  33256499 ccatcaaaaaagtccctccgtccaagtcctccgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacgagtggcaagaaggaagccacg 33256598  T
Q  609 tgt 611  Q
    |||    
T  33256599 tgt 33256601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 43318184 - 43317983
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||| | | |||||||||| |  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 43318085  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||||||||||||||||||||  | | |||| ||||||||||| || ||||||||   |||| ||||||||| |||||  ||||||| |||||||||||||    
T  43318084 cataaaaaaggtccctccgtccaagtgctctgttagccatgccgatatgtcgcccagcatgttgtgctgtcttgtacatgtggcaaaaaggaagccacgt 43317985  T
Q  610 gt 611  Q
    ||    
T  43317984 gt 43317983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 38178217 - 38178016
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||| ||||||||||||| | |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||  |  ||||||||||||||||||    
T  38178217 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtc 38178118  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||| |||  | | ||||||||||||||||||| |||||| | | ||||||||| |||| ||||| ||| |||| ||||||| |||||    
T  38178117 catcaaaaaggtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgt 38178018  T
Q  610 gt 611  Q
    ||    
T  38178017 gt 38178016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 38205441 - 38205240
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||| ||||||||||||| | |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||  |  ||||||||||||||||||    
T  38205441 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtc 38205342  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    ||| |||||||||||| |||  | | ||||||||||||||||||| |||||| | | ||||||||| |||| ||||| ||| |||| ||||||| |||||    
T  38205341 catcaaaaaggtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgt 38205242  T
Q  610 gt 611  Q
    ||    
T  38205241 gt 38205240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 611
Target Start/End: Complemental strand, 35292505 - 35292305
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||| | | || ||||||| |  ||| ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  35292505 gagtgaaccatcaaattcgtccttgaatttttatgggt-ggccaaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 35292407  T
Q  510 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 609  Q
    |||||||||||| |||||||  |   ||||||||||| || ||||  |||||||   |||| ||||||||| ||||| |||||||| |||||||| ||||    
T  35292406 cataaaaaaggttcctccgtccaaatgctccgttagctattctgatctgtcgcccaacatgttgtgctgtcttgtacacgtggcaaaaaggaagctacgt 35292307  T
Q  610 gt 611  Q
    ||    
T  35292306 gt 35292305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 410 - 522
Target Start/End: Original strand, 38596868 - 38596980
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||| |||||||||||||||||||| |||| ||  ||||||||||||| |||||||    
T  38596868 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtc 38596967  T
Q  510 cataaaaaaggtc 522  Q
    ||| |||||||||    
T  38596968 catcaaaaaggtc 38596980  T

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Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 40330606 - 40330515
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||    
T  40330606 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40330515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 410 - 501
Target Start/End: Complemental strand, 32090016 - 32089925
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  32090016 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 32089925  T

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Target: chr5; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 410 - 499
Target Start/End: Original strand, 32835876 - 32835965
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 499  Q
    ||||||| |||||| |||||||||||||||||||| ||||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

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Target: chr5; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 42619289 - 42619380
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||||||| ||||| ||||||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 42619380  T

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Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 611
Target Start/End: Original strand, 38597024 - 38597146
Alignment:
Q  489 tccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgc 588  Q
    ||||| |||||||||||||||||| ||||||||||||| ||  | | | |||||||||| ||||||  ||||||| | ||||||||| |||| ||||| |    
T  38597024 tcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaagtgttccgttagccgtgctgatctgtcgccctgcatgctgtgttgtcttgtacac 38597123  T
Q  589 gtggcaagaaggaagccacgtgt 611  Q
    ||||||||||||||||| |||||    
T  38597124 gtggcaagaaggaagccgcgtgt 38597146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 501
Target Start/End: Complemental strand, 33257843 - 33257760
Alignment:
Q  418 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||| |||||||||||||||| ||| ||||||||| || |||||| ||||||||||||| ||||||| ||||||||||||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 33257760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 38176647 - 38176723
Alignment:
Q  425 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||||||| | || ||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38176723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 38203871 - 38203947
Alignment:
Q  425 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    |||||||||||||||||| | || ||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 420 - 611
Target Start/End: Original strand, 17574328 - 17574518
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 17574427  T
Q  520 gtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||||  |   ||||||||||   || |||| |||| |||| ||||||||| |||| ||||| |||| ||| |||| ||||||||||    
T  17574428 gtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgt 17574518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 35291048 - 35291139
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| ||||||  |||||||||||||||||||  |||||||||||  |||||||| |||| ||||| ||||||| ||||||||||||||    
T  35291048 gagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgt 35291139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 36057727 - 36057618
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| ||||||||||    ||||||||||| |||||| |||| |||||||| || ||||   ||||||||||  ||||||||||| |||| |    
T  36057727 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatg 36057628  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  36057627 gtccctccgt 36057618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 18726565 - 18726656
Alignment:
Q  410 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 501  Q
    ||||||| |||||| |||||||||||||||| ||| ||   |||| || |||||||||||||||||||| |||||||  ||||| |||||||    
T  18726565 gagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 18726656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 529
Target Start/End: Original strand, 24496780 - 24496862
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||| |||||| |||||||||||||| ||||| |||| || |||||||||||||| |||||| ||| |||| ||||| |||||    
T  24496780 tcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatccgt 24496862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 611
Target Start/End: Complemental strand, 32838567 - 32838423
Alignment:
Q  470 atgcgaaatttcaatttcatccctgaatttgtcagacgtccataaa---aaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttt 566  Q
    ||||||||| |||| || ||  |||||||||||||||| |||| ||   |||||||  || || || | |||||||||| |||| ||| |||||| | |     
T  32838567 atgcgaaatatcaacttaatttctgaatttgtcagacgaccattaattaaaaggtctttctgtcaaagtgctccgttagtcatgttgatatgtcgtccta 32838468  T
Q  567 catgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgt 611  Q
    ||||||||| |||| ||||| | | ||||||||||||||||||||    
T  32838467 catgctgtgttgtcttgtacacatagcaagaaggaagccacgtgt 32838423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 529
Target Start/End: Original strand, 2179824 - 2179906
Alignment:
Q  447 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||| |||||| |||||| |||| || ||||| || |||| ||||||||||||  ||||| ||||| |||| |||||||||||    
T  2179824 tcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccatcaaaatggtccctccgt 2179906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 7267853 - 7267962
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    ||| ||||||| ||| || |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  7267853 tcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 7267952  T
Q  520 gtccctccgt 529  Q
     |||||||||    
T  7267953 atccctccgt 7267962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 529
Target Start/End: Complemental strand, 30468362 - 30468285
Alignment:
Q  452 caaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 529  Q
    |||||| ||| ||||||| |||||||| || ||||  ||| |||||||  ||||||||||| |||| |||||||||||    
T  30468362 caaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgt 30468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 34327645 - 34327754
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||||     | ||||||||| ||| || |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  34327645 tcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 34327744  T
Q  520 gtccctccgt 529  Q
    ||| ||||||    
T  34327745 gtctctccgt 34327754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 2121 - 2197
Alignment:
Q  433 tgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 509  Q
    |||||||| |||| ||| |||||||  ||||||||||||||||||| |||| || |||||| |||||||||||||||    
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaacttaatccctaaatttgtcagacgtc 2197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 3304 - 3413
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    |||||||| || |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||       
T  3304 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 3403  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  3404 gtccctccgt 3413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 4476 - 4585
Alignment:
Q  420 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 519  Q
    |||||||||||| |||||||| |    |||||||| || |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||       
T  4476 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 4575  T
Q  520 gtccctccgt 529  Q
    ||||||||||    
T  4576 gtccctccgt 4585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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