View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8252_low_5 (Length: 430)

Name: NF8252_low_5
Description: NF8252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8252_low_5
NF8252_low_5
[»] chr4 (44 HSPs)
chr4 (19-414)||(5795415-5795810)
chr4 (11-90)||(8325377-8325456)
chr4 (11-90)||(46295096-46295175)
chr4 (10-90)||(37109348-37109428)
chr4 (11-90)||(44865333-44865412)
chr4 (11-89)||(21344817-21344894)
chr4 (26-89)||(29195095-29195157)
chr4 (4-86)||(7292789-7292871)
chr4 (11-85)||(37980146-37980219)
chr4 (11-89)||(55427198-55427276)
chr4 (11-89)||(56409951-56410028)
chr4 (12-89)||(4483300-4483377)
chr4 (1-90)||(8306484-8306573)
chr4 (10-59)||(37274456-37274505)
chr4 (13-89)||(37455569-37455645)
chr4 (10-51)||(38838835-38838876)
chr4 (45-89)||(6606058-6606102)
chr4 (1-89)||(7949442-7949530)
chr4 (14-90)||(14451747-14451822)
chr4 (10-90)||(28635695-28635775)
chr4 (1-89)||(51948480-51948568)
chr4 (11-90)||(19238575-19238654)
chr4 (4-59)||(23377986-23378041)
chr4 (18-89)||(24827825-24827896)
chr4 (11-90)||(47044716-47044795)
chr4 (12-90)||(31759657-31759735)
chr4 (11-65)||(32992636-32992690)
chr4 (11-89)||(37720212-37720290)
chr4 (19-89)||(38206132-38206201)
chr4 (11-89)||(39509070-39509148)
chr4 (19-89)||(42281240-42281309)
chr4 (1-89)||(21660132-21660220)
chr4 (1-89)||(21668896-21668984)
chr4 (8-84)||(32475090-32475165)
chr4 (10-82)||(49576891-49576963)
chr4 (10-89)||(19680785-19680864)
chr4 (35-86)||(39030135-39030186)
chr4 (13-88)||(43408400-43408475)
chr4 (12-82)||(43728402-43728472)
chr4 (18-90)||(9241030-9241102)
chr4 (29-89)||(51250538-51250598)
chr4 (9-85)||(51714377-51714452)
chr4 (19-63)||(51954140-51954184)
chr4 (30-90)||(53475558-53475618)
[»] chr5 (31 HSPs)
chr5 (11-91)||(31669023-31669102)
chr5 (10-89)||(16773807-16773886)
chr5 (10-89)||(34984806-34984885)
chr5 (11-89)||(16457810-16457888)
chr5 (11-89)||(30883196-30883274)
chr5 (25-90)||(14495817-14495882)
chr5 (1-90)||(25627056-25627145)
chr5 (10-90)||(7918466-7918546)
chr5 (9-85)||(43241678-43241754)
chr5 (11-86)||(16172982-16173056)
chr5 (10-89)||(29692383-29692462)
chr5 (32-90)||(8278294-8278352)
chr5 (20-90)||(18989008-18989078)
chr5 (12-89)||(19373239-19373315)
chr5 (1-58)||(24895066-24895123)
chr5 (4-89)||(26078042-26078127)
chr5 (13-89)||(21589288-21589364)
chr5 (15-90)||(892476-892551)
chr5 (25-68)||(5943894-5943936)
chr5 (10-89)||(14285161-14285240)
chr5 (18-89)||(32340342-32340412)
chr5 (35-90)||(37421284-37421339)
chr5 (35-89)||(20266794-20266848)
chr5 (25-82)||(1410671-1410728)
chr5 (11-68)||(3315236-3315293)
chr5 (18-87)||(18596006-18596075)
chr5 (4-89)||(21549128-21549213)
chr5 (10-59)||(39327087-39327136)
chr5 (25-85)||(16436622-16436681)
chr5 (13-89)||(22737082-22737158)
chr5 (13-89)||(30109308-30109384)
[»] chr7 (44 HSPs)
chr7 (11-90)||(22760862-22760941)
chr7 (19-89)||(5273596-5273666)
chr7 (11-89)||(38374597-38374675)
chr7 (19-92)||(5579240-5579313)
chr7 (10-89)||(43215184-43215263)
chr7 (14-89)||(48125176-48125250)
chr7 (10-90)||(26459407-26459487)
chr7 (10-90)||(39631843-39631923)
chr7 (11-90)||(25956291-25956369)
chr7 (8-87)||(29385738-29385817)
chr7 (18-89)||(31835192-31835263)
chr7 (11-89)||(19553454-19553531)
chr7 (11-89)||(48039645-48039723)
chr7 (18-91)||(7801178-7801251)
chr7 (1-82)||(28115854-28115935)
chr7 (10-90)||(30442487-30442567)
chr7 (10-89)||(23552118-23552197)
chr7 (1-91)||(15137551-15137641)
chr7 (11-89)||(18056773-18056851)
chr7 (25-82)||(3968654-3968711)
chr7 (4-89)||(23301593-23301678)
chr7 (30-82)||(36803644-36803696)
chr7 (10-89)||(2446308-2446387)
chr7 (10-53)||(2882986-2883029)
chr7 (10-89)||(17041009-17041088)
chr7 (11-90)||(29538560-29538639)
chr7 (11-90)||(43590906-43590985)
chr7 (11-89)||(20335829-20335907)
chr7 (27-85)||(23595733-23595791)
chr7 (25-87)||(44628195-44628257)
chr7 (25-90)||(25021347-25021412)
chr7 (26-86)||(42885127-42885187)
chr7 (39-90)||(6426078-6426129)
chr7 (14-77)||(18891082-18891145)
chr7 (18-89)||(30579335-30579406)
chr7 (11-89)||(4161288-4161366)
chr7 (7-89)||(35119383-35119465)
chr7 (19-89)||(35328881-35328950)
chr7 (18-84)||(41519269-41519335)
chr7 (28-90)||(42836016-42836078)
chr7 (18-91)||(48771936-48772009)
chr7 (10-86)||(4566425-4566501)
chr7 (25-89)||(25590611-25590675)
chr7 (18-86)||(43663100-43663168)
[»] chr8 (42 HSPs)
chr8 (12-89)||(26688865-26688942)
chr8 (19-89)||(11793527-11793597)
chr8 (11-66)||(3524399-3524454)
chr8 (1-90)||(23361637-23361726)
chr8 (29-89)||(32157191-32157251)
chr8 (18-89)||(11979252-11979323)
chr8 (10-68)||(22193361-22193419)
chr8 (11-96)||(6530800-6530884)
chr8 (4-89)||(16852340-16852425)
chr8 (11-87)||(2203494-2203570)
chr8 (1-89)||(19703475-19703563)
chr8 (11-91)||(43533717-43533797)
chr8 (10-89)||(968362-968441)
chr8 (10-68)||(6536541-6536599)
chr8 (26-89)||(32992778-32992843)
chr8 (10-87)||(3624582-3624659)
chr8 (12-89)||(18897166-18897243)
chr8 (25-89)||(22268946-22269009)
chr8 (10-89)||(18540298-18540377)
chr8 (25-91)||(1458371-1458436)
chr8 (25-91)||(2428078-2428143)
chr8 (14-68)||(25389477-25389531)
chr8 (11-89)||(28783060-28783138)
chr8 (1-86)||(11492061-11492146)
chr8 (10-90)||(35287715-35287795)
chr8 (1-89)||(44780102-44780190)
chr8 (11-86)||(18546360-18546435)
chr8 (34-89)||(20994479-20994534)
chr8 (13-88)||(29858049-29858124)
chr8 (11-89)||(8059632-8059710)
chr8 (1-59)||(11819806-11819864)
chr8 (35-89)||(17727448-17727502)
chr8 (1-59)||(27750760-27750818)
chr8 (1-62)||(27979184-27979245)
chr8 (1-62)||(28036453-28036514)
chr8 (8-89)||(29431011-29431092)
chr8 (9-89)||(3058045-3058125)
chr8 (25-89)||(6436567-6436631)
chr8 (18-90)||(23874387-23874459)
chr8 (10-90)||(33017213-33017293)
chr8 (10-90)||(40872875-40872955)
chr8 (11-59)||(40888831-40888879)
[»] chr6 (32 HSPs)
chr6 (11-89)||(24334023-24334101)
chr6 (10-89)||(33549104-33549183)
chr6 (10-82)||(24507533-24507605)
chr6 (11-89)||(14557962-14558040)
chr6 (12-89)||(12253707-12253784)
chr6 (11-83)||(34444809-34444881)
chr6 (10-84)||(6691548-6691621)
chr6 (11-89)||(28028530-28028607)
chr6 (19-89)||(31622997-31623067)
chr6 (4-89)||(12188294-12188379)
chr6 (25-86)||(22564260-22564321)
chr6 (13-85)||(10338174-10338246)
chr6 (1-89)||(12234495-12234583)
chr6 (12-79)||(1906503-1906570)
chr6 (12-63)||(3809532-3809583)
chr6 (12-90)||(30127399-30127477)
chr6 (1-87)||(32613128-32613214)
chr6 (1-90)||(11423565-11423654)
chr6 (3-63)||(3172758-3172818)
chr6 (15-67)||(6384005-6384056)
chr6 (18-82)||(19088444-19088508)
chr6 (18-82)||(24762413-24762476)
chr6 (25-68)||(20863396-20863439)
chr6 (26-89)||(23241987-23242049)
chr6 (10-68)||(6385883-6385941)
chr6 (1-59)||(20213071-20213129)
chr6 (1-59)||(22107094-22107152)
chr6 (18-60)||(23910116-23910158)
chr6 (11-89)||(24641188-24641266)
chr6 (19-64)||(34026486-34026531)
chr6 (25-89)||(22684-22747)
chr6 (10-90)||(1056682-1056762)
[»] chr3 (54 HSPs)
chr3 (11-88)||(18316497-18316573)
chr3 (10-89)||(53863865-53863943)
chr3 (11-90)||(13164757-13164836)
chr3 (19-89)||(26871510-26871580)
chr3 (4-89)||(37788456-37788541)
chr3 (18-87)||(42799753-42799821)
chr3 (18-90)||(3054993-3055065)
chr3 (10-90)||(14186647-14186726)
chr3 (1-89)||(36720381-36720469)
chr3 (10-86)||(53412948-53413024)
chr3 (11-86)||(15034348-15034422)
chr3 (1-86)||(13808873-13808958)
chr3 (1-86)||(30510187-30510272)
chr3 (1-89)||(4222141-4222229)
chr3 (10-82)||(4844508-4844580)
chr3 (10-82)||(4870204-4870276)
chr3 (34-90)||(31510739-31510795)
chr3 (1-89)||(31520593-31520681)
chr3 (10-90)||(40286854-40286934)
chr3 (22-90)||(42430334-42430400)
chr3 (25-68)||(40883275-40883318)
chr3 (11-89)||(5499405-5499483)
chr3 (1-59)||(28531046-28531104)
chr3 (11-89)||(35981684-35981762)
chr3 (11-89)||(40268489-40268566)
chr3 (4-90)||(40777013-40777097)
chr3 (19-89)||(47079701-47079770)
chr3 (11-65)||(54990726-54990780)
chr3 (11-84)||(353155-353228)
chr3 (11-68)||(19716218-19716275)
chr3 (8-89)||(30311306-30311387)
chr3 (11-88)||(47454615-47454692)
chr3 (25-89)||(8051214-8051278)
chr3 (13-89)||(16212972-16213048)
chr3 (13-89)||(34844371-34844446)
chr3 (1-85)||(45308890-45308974)
chr3 (10-90)||(51903875-51903955)
chr3 (10-89)||(10499106-10499185)
chr3 (10-89)||(16354889-16354968)
chr3 (10-89)||(27093358-27093437)
chr3 (1-68)||(32651426-32651493)
chr3 (33-91)||(12761510-12761568)
chr3 (18-68)||(13347906-13347956)
chr3 (25-91)||(47810756-47810822)
chr3 (11-68)||(5166449-5166506)
chr3 (10-59)||(10445136-10445185)
chr3 (11-64)||(16900679-16900732)
chr3 (25-89)||(35623279-35623345)
chr3 (9-82)||(38550400-38550473)
chr3 (19-68)||(44069779-44069828)
chr3 (19-59)||(7975448-7975488)
chr3 (11-87)||(10682942-10683017)
chr3 (25-89)||(11092182-11092245)
chr3 (11-86)||(17034991-17035064)
[»] chr2 (47 HSPs)
chr2 (10-90)||(32106565-32106645)
chr2 (10-90)||(40416387-40416467)
chr2 (9-89)||(42327391-42327471)
chr2 (10-89)||(19244109-19244188)
chr2 (11-89)||(37480075-37480153)
chr2 (11-89)||(39714992-39715070)
chr2 (11-89)||(45672376-45672454)
chr2 (25-86)||(30359657-30359718)
chr2 (10-89)||(42602554-42602633)
chr2 (11-89)||(3697398-3697475)
chr2 (11-89)||(29503271-29503349)
chr2 (11-89)||(45672227-45672305)
chr2 (25-90)||(5147691-5147756)
chr2 (25-90)||(41908650-41908715)
chr2 (9-89)||(30808643-30808723)
chr2 (14-82)||(41202257-41202325)
chr2 (11-90)||(16525177-16525255)
chr2 (11-90)||(23052521-23052600)
chr2 (25-89)||(12517765-12517833)
chr2 (10-88)||(16918575-16918653)
chr2 (25-90)||(12994388-12994453)
chr2 (19-68)||(13747640-13747688)
chr2 (25-89)||(19016031-19016095)
chr2 (3-63)||(27244334-27244394)
chr2 (18-90)||(28846690-28846762)
chr2 (10-89)||(42922414-42922494)
chr2 (25-89)||(43964001-43964064)
chr2 (22-89)||(1729816-1729883)
chr2 (35-89)||(329224-329278)
chr2 (11-89)||(342395-342472)
chr2 (11-81)||(21213777-21213847)
chr2 (12-58)||(33839259-33839305)
chr2 (19-89)||(34041594-34041664)
chr2 (51-89)||(36317429-36317467)
chr2 (10-59)||(4262299-4262348)
chr2 (11-64)||(6099517-6099569)
chr2 (25-90)||(18825340-18825404)
chr2 (4-89)||(19322768-19322853)
chr2 (11-68)||(26176324-26176380)
chr2 (18-67)||(26276377-26276426)
chr2 (26-90)||(4438992-4439056)
chr2 (1-89)||(23230593-23230680)
chr2 (33-89)||(29197396-29197452)
chr2 (11-67)||(31681071-31681127)
chr2 (12-68)||(36176758-36176814)
chr2 (29-89)||(41138327-41138387)
chr2 (25-89)||(45026743-45026807)
[»] scaffold0258 (1 HSPs)
scaffold0258 (10-89)||(15320-15399)
[»] chr1 (42 HSPs)
chr1 (11-90)||(15581140-15581218)
chr1 (11-90)||(45266833-45266912)
chr1 (19-85)||(4824975-4825041)
chr1 (19-89)||(37046985-37047054)
chr1 (10-90)||(9165192-9165272)
chr1 (10-89)||(19940869-19940948)
chr1 (1-86)||(15786308-15786393)
chr1 (10-89)||(36371470-36371549)
chr1 (25-84)||(36428717-36428776)
chr1 (10-89)||(51814494-51814573)
chr1 (11-90)||(52116779-52116858)
chr1 (11-89)||(16169976-16170054)
chr1 (11-89)||(19528325-19528403)
chr1 (11-89)||(31605846-31605924)
chr1 (12-89)||(40257399-40257476)
chr1 (25-89)||(9570644-9570707)
chr1 (10-90)||(10526822-10526902)
chr1 (11-90)||(24019021-24019101)
chr1 (11-83)||(43445969-43446041)
chr1 (10-65)||(30203224-30203279)
chr1 (25-87)||(17296986-17297048)
chr1 (26-84)||(17424503-17424561)
chr1 (19-89)||(39012291-39012360)
chr1 (25-90)||(1094524-1094589)
chr1 (4-89)||(11063556-11063641)
chr1 (10-87)||(33700770-33700847)
chr1 (25-89)||(19480527-19480590)
chr1 (25-89)||(31794276-31794340)
chr1 (8-83)||(32916798-32916871)
chr1 (4-88)||(44126396-44126480)
chr1 (10-89)||(4566548-4566627)
chr1 (1-59)||(6122824-6122882)
chr1 (19-89)||(25297772-25297842)
chr1 (10-63)||(3265950-3266003)
chr1 (19-68)||(20203886-20203935)
chr1 (44-89)||(24857861-24857906)
chr1 (32-89)||(45235398-45235455)
chr1 (1-89)||(6650595-6650683)
chr1 (25-89)||(27567134-27567198)
chr1 (25-89)||(41470623-41470686)
chr1 (25-89)||(41508831-41508895)
chr1 (10-90)||(51703778-51703858)
[»] scaffold0337 (1 HSPs)
scaffold0337 (10-82)||(1760-1832)
[»] scaffold0260 (1 HSPs)
scaffold0260 (11-90)||(15318-15398)
[»] scaffold0236 (1 HSPs)
scaffold0236 (25-84)||(24852-24911)
[»] scaffold0002 (2 HSPs)
scaffold0002 (11-90)||(142152-142231)
scaffold0002 (14-86)||(94972-95044)
[»] scaffold0065 (1 HSPs)
scaffold0065 (10-82)||(12196-12268)
[»] scaffold0118 (1 HSPs)
scaffold0118 (10-90)||(41630-41710)
[»] scaffold0016 (1 HSPs)
scaffold0016 (31-90)||(77619-77678)
[»] scaffold0012 (1 HSPs)
scaffold0012 (25-88)||(240898-240960)
[»] scaffold0180 (1 HSPs)
scaffold0180 (10-68)||(19959-20017)
[»] scaffold0070 (2 HSPs)
scaffold0070 (8-89)||(42515-42596)
scaffold0070 (38-86)||(38927-38975)
[»] scaffold0172 (1 HSPs)
scaffold0172 (25-89)||(15789-15853)
[»] scaffold0102 (1 HSPs)
scaffold0102 (10-90)||(17061-17141)
[»] scaffold0047 (1 HSPs)
scaffold0047 (10-89)||(14969-15047)
[»] scaffold0291 (1 HSPs)
scaffold0291 (11-89)||(2468-2546)
[»] scaffold0299 (1 HSPs)
scaffold0299 (10-83)||(11534-11607)


Alignment Details
Target: chr4 (Bit Score: 348; Significance: 0; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 19 - 414
Target Start/End: Original strand, 5795415 - 5795810
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttagggtcatttccttttctatgtagatgaa 118  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5795415 aacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgggttagggtcatttccttttctatgtagatgaa 5795514  T
Q  119 ttattagaattatataattttttatttctcaaaatcgattactagataatagtgacagcagccctaatttttgcagacagtcatttgttcctcagttgct 218  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  5795515 ttattagaattatataattttttatttctcaaaatcaattactagataatggtgacagcagcccttatttttgtagacagtcatttgttcctcagttgct 5795614  T
Q  219 gtccatcaaagatctaaaaatttgcagcatttttcatctcaaactaaccccactacccatattggtaatgccaaaccatcttaacaccagaggtttatcg 318  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  5795615 gtccatcaaagatctaaaaatttgcaacatttttcatctctcactaaccccactacccatattggtaatgccaaaccatcttaacaccagaggtttatca 5795714  T
Q  319 tcattagagtgtcaaacaacccaatgccctaattgttgattcgctgtatctttctatatgtgcaatgcttgacaatgcatctaacttctacgcact 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5795715 tcattagagtgtcaaacaacccaatgccctaattgttgattcgctgtatctttctatatgtgcaatgcttgacaatgcatctaacttctatgcact 5795810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 8325377 - 8325456
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||| |||| |||||||| | | |||||||||||||||||    
T  8325377 gagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgggtta 8325456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 46295175 - 46295096
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| |||||||||||||||||| ||||||| |||||||| |||||| | |||||||||| ||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacctaagtgggtta 46295096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 37109348 - 37109428
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  37109348 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 37109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 44865412 - 44865333
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| ||||||||||||||||||||||||| ||  ||||| | |||| |||||||| ||| |||||||||||||||||    
T  44865412 gagaatcgaacctaagaccttgaggaggagcacacatcaaggactcaagccaacaccatcaggccaacccaagtgggtta 44865333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21344894 - 21344817
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||| | |||||||||| ||||||| |||||||||||||||| ||||| || ||| ||||||||||||||||    
T  21344894 gagaattgaacatgagaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgggtt 21344817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 29195157 - 29195095
Alignment:
Q  26 gaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| ||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||    
T  29195157 gaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 29195095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 7292789 - 7292871
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    ||||| ||||||| |||||| |||| ||||||||||||| ||||| |||| ||||| ||| ||||  ||||||||||||||||    
T  7292789 cactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 37980146 - 37980219
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    |||||| |||||| |||||||||| ||||||| |||||||||||||||| ||||| || ||| ||||||||||||    
T  37980146 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggccaacccaagtg 37980219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 55427198 - 55427276
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| ||| ||||||| ||||| |||||||||| ||| |||| ||| ||||||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 56410028 - 56409951
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||||| ||||||| |||||||||||||||| ||||| || ||| ||| ||||||||||||    
T  56410028 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacagcaccaggccagcccaagtgggtt 56409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 4483300 - 4483377
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||| ||||||||||||||| || ||||  |||||||||||||| |   |||| ||||||||||||||||    
T  4483300 agaattgaacctgagaccttgaggaggatcagactctcaggtcccaagtcaatattgacaggccaacccaagtgggtt 4483377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8306573 - 8306484
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||| ||||||| |||| |||||| | ||||||||||| ||||| ||||| |||| | |  ||||||||||||| |||||||||||    
T  8306573 tgacactagagagaatcgaacttaagacttcgaggaggagcacactcccaggtctcaagccgatgccaacagaccaactcaagtgggtta 8306484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 37274456 - 37274505
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  37274456 agagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaag 37274505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 37455645 - 37455569
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaa-ggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||| |||||| |||||||||| ||||||||||||||| ||||||||| |||||||| ||| ||||||||||| ||||    
T  37455645 gaatcgaacctgagaccttgag-aggagcatactccaaaggtcccaagccaacaccaccaggccaacccaagttggtt 37455569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 38838876 - 38838835
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaag 51  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  38838876 agagaatcgaacctaagaccttgaggaggagcatactccaag 38838835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 6606102 - 6606058
Alignment:
Q  45 ctccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  6606102 ctccaaggtcccaagccaacaccatcagaccaacccaagtgggtt 6606058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7949442 - 7949530
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| | ||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||| |||   || ||| ||||||||||||    
T  7949442 tgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 14451747 - 14451822
Alignment:
Q  14 aattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||||||||||||||||||| ||||  |  ||||||||||| |||| |  ||||||||||||||||||    
T  14451747 aattgaacctaagaccttgaggaggagcacactctcatatcccaagtcaa-accaccgaaccaacccaagtgggtta 14451822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 28635775 - 28635695
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||||||||||  |||||||||| ||||| || ||||||||||  |||| |||  ||||||||||||||||    
T  28635775 agagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtta 28635695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51948568 - 51948480
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||  |||||||||||||| |||||| ||||||| ||| ||||| || ||||||||||| || | |||  |||||||||||||||    
T  51948568 tgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 19238575 - 19238654
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||  |||||| ||||||||||| ||||| | |||||||| ||| |||| ||| |||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 23378041 - 23377986
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    ||||| ||||||| |||||| |||||||||||||||||| ||||| ||||||||||    
T  23378041 cactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23377986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24827896 - 24827825
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||||||  ||||| |||||||||||||| |||| | |||||||| |||||||||    
T  24827896 gaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggtt 24827825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 47044795 - 47044716
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| |||||| ||||||||||| ||||  || ||||||||||| |||| ||| |||| ||||||||||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtta 47044716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 31759657 - 31759735
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||| ||| || |||||||||||||||||| ||||| | |||||||| ||| ||||  ||| ||||||||||||||||    
T  31759657 agaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtta 31759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 32992690 - 32992636
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaaca 65  Q
    |||||| |||| | |||||||||||||||||| |||||||||||||||| |||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaaca 32992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 37720212 - 37720290
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| ||||||  ||||||||||||| ||| ||||| |||||||||| ||| | || ||| ||||||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 38206132 - 38206201
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||||||| ||||||| |||||||||||||||| || ||||| |||  |||||||||||||||    
T  38206132 aacctgagaccttgag-aggagcacactccaaggtcccaagccagcaccaccaggtcaacccaagtgggtt 38206201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 39509148 - 39509070
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| ||||||||||| ||||| || ||||||| ||  ||||  |||||||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 42281240 - 42281309
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||||||| ||||||| ||| |||||||||||| |||||||| | | ||||||||||||||||    
T  42281240 aacctgagaccttgag-aggagcacactacaaggtcccaagccaacaccacctggccaacccaagtgggtt 42281309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21660132 - 21660220
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| ||| ||| |||| | |||||| ||||| ||||| ||||| || || |||||||| |||| ||||||||||||||| ||||    
T  21660132 tgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtt 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21668896 - 21668984
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| ||| ||| |||| | |||||| ||||| ||||| ||||| || || |||||||| |||| ||||||||||||||| ||||    
T  21668896 tgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtt 21668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 32475090 - 32475165
Alignment:
Q  8 aaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagt 84  Q
    ||||||||| |||||| |||||||||| |||||   |||||| ||||||||| ||||||||  ||||||||||||||    
T  32475090 aaagagaatcgaacctgagaccttgag-aggagttcactccagggtcccaagccaacaccactagaccaacccaagt 32475165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 49576891 - 49576963
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    ||||||| |||||| |||||||||||||||||| ||||| | |||| ||| ||| |||| ||| |||||||||    
T  49576891 agagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 19680785 - 19680864
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||||||||  || ||||  || |||| |||||||||||    
T  19680785 agagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 39030135 - 39030186
Alignment:
Q  35 gaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||||| |||||||||||||||| |||||||| ||| ||||||| |||||    
T  39030135 gaggagcacactccaaggtcccaagccaacaccaccaggccaaccccagtgg 39030186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 43408400 - 43408475
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggt 88  Q
    |||| |||||| |||||||||| | ||||| ||| |||| || ||||||||||||| |||||||||  ||||||||    
T  43408400 gaatcgaacctgagaccttgagaatgagcacacttcaagttctcaagtcaacaccaccagaccaacttaagtgggt 43408475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 43728472 - 43728402
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||||||||| |||| ||||||||||||| ||||| || ||  ||||||| |||| || ||||||||||    
T  43728472 agaattgaacctgagactttgaggaggagcacactcccagatcataagtcaataccaccataccaacccaa 43728402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 9241030 - 9241102
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| ||| ||||||| ||| | || ||||||| ||| |||| ||| |||||||||||||||||    
T  9241030 gaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtta 9241102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 51250538 - 51250598
Alignment:
Q  29 cttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| ||||| || ||||||| ||| |||| ||| ||||||||||||||||    
T  51250538 cttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 51714377 - 51714452
Alignment:
Q  9 aagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    |||| |||| ||||||| || ||||| ||||||||||||||| |||  |||||||||||| | |||||||| |||||    
T  51714377 aagacaattaaacctaaaactttgag-aggagcatactccaaagtctaaagtcaacaccacccgaccaacctaagtg 51714452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 51954184 - 51954140
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaa 63  Q
    ||||| |||||| ||||||||||||||||| | ||||||||||||    
T  51954184 aacctgagacctcgaggaggagcatactcccaagtcccaagtcaa 51954140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 53475558 - 53475618
Alignment:
Q  30 ttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| || || |||||||||||||||  ||||||||  |||||||||||| |||||||    
T  53475558 ttgaggaagatcacactccaaggtcccaaaccaacaccactagaccaacccaactgggtta 53475618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 31669023 - 31669102
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  31669023 gagaatcgaacctaagaccttgag-aggagcagactccaaggtcccaagccaacaccatcagaccaacccaagtgggttag 31669102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 16773886 - 16773807
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||| ||||||||||| ||||| |||||||||||||| |||| ||||||||| ||||||||||    
T  16773886 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 34984885 - 34984806
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||| ||||| ||| ||||  |||||||||||||||||||    
T  34984885 agagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 16457888 - 16457810
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||| ||| |||| ||| |||||| |||||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 30883196 - 30883274
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||| | |||||||||||||||||| ||||| |||||||||| ||| ||||  |||||||||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 14495817 - 14495882
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| ||||||||||| ||||| || ||||||||||| |||| ||||||||||||| |||||||    
T  14495817 agacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtta 14495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25627145 - 25627056
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| | ||||||| |||||| |||||||||||||||||| ||||| | || ||||| ||| ||||  || |||||||||||||||||    
T  25627145 tgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtta 25627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 7918466 - 7918546
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||||||||||||||||||||   ||||| |||| ||||| ||| ||||  || |||||||||||||||||    
T  7918466 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggtta 7918546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 43241678 - 43241754
Alignment:
Q  9 aagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    ||||||||||||||| ||||||  |||| | ||| |||||||| ||||||||||| ||||  |||||||||||||||    
T  43241678 aagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtg 43241754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 16172982 - 16173056
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||| |||||| |||||||||| ||||||| ||||||||||| |||| |||||| | ||| |||||||||||||    
T  16172982 gagaatcgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacactaccaggccaacccaagtgg 16173056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 29692383 - 29692462
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| ||||| |||| ||||||||||||| ||||| || ||||||  ||| |||| ||||||||||||| ||||||    
T  29692383 agagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggtt 29692462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 8278294 - 8278352
Alignment:
Q  32 gaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||| ||||| | |||||||| ||| |||| |||||||||||||||||||||    
T  8278294 gaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 18989008 - 18989078
Alignment:
Q  20 acctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| | ||||| |||||||| |||||||||||||||| |||||||| ||  | |||||||||||||||    
T  18989008 acctaaaatcttgaagaggagcacactccaaggtcccaagccaacaccatcatgcaaacccaagtgggtta 18989078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 19373315 - 19373239
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||||| |||||||| || |||| ||||||||||| |||| |||||||| ||| ||||| ||||||||||    
T  19373315 agaatcgaacctaaaaccttgag-agtagcacactccaaggtctcaagccaacaccaccaggccaactcaagtgggtt 19373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24895123 - 24895066
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaa 58  Q
    ||||||||  || ||| |||||| ||| ||||||||||||||||||||||||||||||    
T  24895123 tgacactagggaaaatcgaacctgagagcttgaggaggagcatactccaaggtcccaa 24895066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 26078042 - 26078127
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| ||||||| |||||| ||||||||| ||| |||||||||| | |||||||  ||| ||||  || ||||||||||||||||    
T  26078042 cactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 21589364 - 21589288
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||| |||||| |||| | |||||| |||| ||||| |||||||||| ||| |||| ||| ||||||||||||||||    
T  21589364 gaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 892476 - 892551
Alignment:
Q  15 attgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||| |||||||||||||||| | ||||  |||||||||| ||| ||||  || ||||||||| |||||||    
T  892476 attgaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtta 892551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 5943894 - 5943936
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  5943894 agaccttgag-aggagcacactccaaggtcccaagtcaacacca 5943936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 14285240 - 14285161
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||| ||||| |||  |||   | ||||||||||||||||    
T  14285240 agagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 32340342 - 32340412
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |  | |||  ||||||||||| |||||||    
T  32340342 gaacctaagaccttgag-aggagcacactccaaggtcccaagcctgccccacaagaccaacccatgtgggtt 32340412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 37421339 - 37421284
Alignment:
Q  35 gaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||| |||| |||||||| ||||||||||| ||||||||||||  |||||||    
T  37421339 gaggagcaaactctaaggtcccgagtcaacaccaccagaccaacccagatgggtta 37421284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 20266848 - 20266794
Alignment:
Q  35 gaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||| ||||| ||||    
T  20266848 gaggagcatactctaatgtctcaagtcaacaccaccagaccaactcaagtaggtt 20266794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 1410671 - 1410728
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||| ||||||||||| ||||| |  ||||||||||| |||| |||||||||||||    
T  1410671 agacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 3315293 - 3315236
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||| |||||| |||||||||||||||||  ||||||||||| ||||  |||||||    
T  3315293 gagaatcgaacctgagaccttgaggaggagcgcactccaaggtctcaagctaacacca 3315236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 18596006 - 18596075
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    ||||||||||||||||||||||||| | ||| ||||| |||| ||| ||||  ||| ||| |||||||||    
T  18596006 gaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatccaagtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 21549128 - 21549213
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| ||| ||| |||| | |||| || |||||||||| ||||| |||||||||| ||| ||||  || ||||||||||||||||    
T  21549128 cactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 39327087 - 39327136
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    ||||||| ||| ||||||||||||||||||||| ||||| | ||||||||    
T  39327087 agagaatcgaagctaagaccttgaggaggagcacactcccatgtcccaag 39327136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 16436681 - 16436622
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    |||||||||||||||||| ||||||| |||||||| ||| ||||  || ||||||||||||    
T  16436681 agaccttgaggaggagcacactccaa-gtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 22737158 - 22737082
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||| |||||| |||| ||| ||||||||| ||| | | |||||||| ||| ||||  |||||||||||||||||||    
T  22737158 gaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 30109308 - 30109384
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||| |||||| ||||||  |||||||||| ||||| ||||| |||| ||| |||| ||  ||||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 22760941 - 22760862
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtta 22760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 5273596 - 5273666
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||| ||| ||||||||||||||||    
T  5273596 aacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 38374597 - 38374675
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||  ||||||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggtt 38374675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 5579240 - 5579313
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttagg 92  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||| |||  ||||||||||||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggttagg 5579313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 43215263 - 43215184
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||| ||||  |||||||||||||||||||    
T  43215263 agagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 48125176 - 48125250
Alignment:
Q  14 aattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| |||||||  ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  48125176 aattgaacctgagaccttc-ggaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggtt 48125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 26459407 - 26459487
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  26459407 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 39631923 - 39631843
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| ||||||||||||||||| |||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  39631923 agagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtta 39631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 25956291 - 25956369
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||  || ||||||||| |||||||    
T  25956291 gagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtta 25956369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 29385738 - 29385817
Alignment:
Q  8 aaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    |||||||||  ||||| |||||||||||||||||| ||||||| |||||||| |||||||| | | ||||||||||||||    
T  29385738 aaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 31835263 - 31835192
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||||||||||||||| ||||||||  |||||| |||||||| ||| ||||||||||||||||    
T  31835263 gaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 19553531 - 19553454
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||| ||| |||| ||| |||||||||| |||||    
T  19553531 gagaattgaacctaagaccttgaggaggagcacactcccaggt-ccaagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 48039645 - 48039723
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||| | |||||||||||||||| || |||| |||||||| ||| ||||||||||||||||    
T  48039645 gagaatagaacctgagaccttgcgaaggagcatactccaagatcgcaagccaacaccaccaggccaacccaagtgggtt 48039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7801251 - 7801178
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    |||||| ||||||||| |||||||| ||||| |||||||||||||| |||| ||| |||| |||||||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggttag 7801178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28115854 - 28115935
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    ||||| |||||||||| || ||||||||||||| || ||||||||| ||| ||| |||||||| |||| |||||||||||||    
T  28115854 tgacattaaagagaatcgatcctaagaccttgatgaagagcatacttcaaagtctcaagtcaataccaccagaccaacccaa 28115935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 30442567 - 30442487
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||| ||||   | |||||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtta 30442487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 23552197 - 23552118
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||| | |||||||||||||||||| ||||| |||||||||||||| | ||  || ||||||||||||||||    
T  23552197 agagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15137641 - 15137551
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    |||||| | |||||||  ||||| |||||||||||||||||| ||||| |  ||||||||||  |||| ||| ||||||||||||||||||    
T  15137641 tgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggttag 15137551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 18056773 - 18056851
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| |||||||||| ||||| | | |||||||||| |||| ||||| ||||||||||||||    
T  18056773 gagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaacccaagtgggtt 18056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 3968654 - 3968711
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||||||||||||||| |||| |||||||||||||||||||| ||  |||||||||    
T  3968654 agaccttgaggaggagcacactcgaaggtcccaagtcaacaccaccatgccaacccaa 3968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 23301593 - 23301678
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||  ||| | ||||||  |||||||||| ||||| | |||||||||||| |||| ||| ||||||||||||||||    
T  23301593 cactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 36803644 - 36803696
Alignment:
Q  30 ttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||||||||||    
T  36803644 ttgaggaggagcatactcccaggtcccaagtcaataccactagaccaacccaa 36803696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 2446387 - 2446308
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||| | ||| || ||||||||||| ||||| | |||||||| ||| |||| ||||||||||||||||||||    
T  2446387 agagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 2883029 - 2882986
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggt 53  Q
    |||||||||||||| |||||||||||||||||| ||||||||||    
T  2883029 agagaattgaacctgagaccttgaggaggagcacactccaaggt 2882986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 17041009 - 17041088
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||||||||||||||| ||| | || ||||||| |||  |||  |||||||||||||||||||    
T  17041009 agagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 29538560 - 29538639
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||| | |||||||||| ||||| ||||||||| ||| |||||||||||||  |  |||||||||||||||||    
T  29538560 gagaatcgaacttgagaccttgagaaggagtatactccaatgtctcaagtcaacaccacaatgccaacccaagtgggtta 29538639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 43590985 - 43590906
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| |||| ||||||||||||| ||||| | |||||||| ||| |||| ||| ||||||||| |||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtta 43590906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 20335829 - 20335907
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| ||||||||||| ||||| | |||||||| ||| |||   |||||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 23595791 - 23595733
Alignment:
Q  27 accttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    |||||||||||||||| ||||| || || |||||||| |||| ||||||||||||||||    
T  23595791 accttgaggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtg 23595733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 44628195 - 44628257
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    |||| ||||||||||||| ||||||||||||||||  |||| || ||| ||||||||||||||    
T  44628195 agactttgaggaggagcacactccaaggtcccaagctaacaacaccaggccaacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 25021347 - 25021412
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||| ||||||||||||| ||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  25021347 agactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 42885187 - 42885127
Alignment:
Q  26 gaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    ||||||||||||||||| | || |||||| ||||||||||||| || || |||||||||||    
T  42885187 gaccttgaggaggagcacattcaaaggtctcaagtcaacaccaccaaacaaacccaagtgg 42885127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 6426078 - 6426129
Alignment:
Q  39 agcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||||| | |||||| |||||||| ||| |||||||||||||||||    
T  6426078 agcatactccaaagacccaagccaacaccaccaggccaacccaagtgggtta 6426129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 18891145 - 18891082
Alignment:
Q  14 aattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaa 77  Q
    |||||||| | |||||||||||||||||| |||| |||||| ||||| | ||||| ||||||||    
T  18891145 aattgaacttgagaccttgaggaggagcacactctaaggtctcaagttagcaccaccagaccaa 18891082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 30579406 - 30579335
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||||||||||| | | ||||| ||||| |||| ||| |||| ||| ||||||||||||||||    
T  30579406 gaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 4161366 - 4161288
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||||||| ||| |  ||||||| ||| |||| ||||||| ||| |||| ||||||||||||| ||||||    
T  4161366 gagaatcgaacctaagatcttcaaaaggagcacacttcaagatcccaagccaataccaccagaccaacccaaatgggtt 4161288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 35119465 - 35119383
Alignment:
Q  7 taaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| |||||| | | |||||||| |||||||| || || ||||||||||| ||||  || ||||||||| ||||||    
T  35119465 taaagagaatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 35328881 - 35328950
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||||| || |||| |||| ||||| ||||| |||||||| ||| ||||||||||||||||    
T  35328881 aacctaaaaccttgag-agaagcacactcgaaggttccaagccaacaccaccaggccaacccaagtgggtt 35328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 41519269 - 41519335
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagt 84  Q
    |||||| |||||||||||||||||| ||||| |  ||||||||||| ||||  || |||||||||||    
T  41519269 gaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 42836016 - 42836078
Alignment:
Q  28 ccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||| ||||| ||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  42836016 ccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 42836078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 48772009 - 48771936
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    |||||| ||||||  |||||||||| ||||| || ||||||| ||| |||| ||  ||||||||||||||||||    
T  48772009 gaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggttag 48771936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 4566425 - 4566501
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||||  ||||| |||||||||| ||||  | |||||||||||| ||||||| ||||  || |||||||||||||    
T  4566425 agagaatcaaacctgagaccttgagaaggaatacactccaaggtccgaagtcaataccactaggccaacccaagtgg 4566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 25590675 - 25590611
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| ||||||||||| ||||| || || |||| ||| ||||||||  |||||||||||||||    
T  25590675 agacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 43663100 - 43663168
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||| ||| || |||||||| ||  |||| |||||||||||||| |||| ||| |||||||||||||    
T  43663100 gaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtgg 43663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 7e-22; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 26688942 - 26688865
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||    
T  26688942 agaactgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 11793527 - 11793597
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||  |||||||||||||||||||    
T  11793527 aacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagaccaacccaagtgggtt 11793597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 3524399 - 3524454
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacac 66  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  3524399 gagaattgaacctaagaccttgaggaggagcacactccaaggtcccaagccaacac 3524454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23361637 - 23361726
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| | |||||||||||||| |||||||||||||||||| ||||| |  ||||||||||| |||| |||  ||||||||||||||||    
T  23361637 tgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtta 23361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 32157251 - 32157191
Alignment:
Q  29 cttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||    
T  32157251 cttgaggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 11979323 - 11979252
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||||| || |||| ||| ||||||||||||||||||||  || |||||||||||||||||    
T  11979323 gaacctaagaccttgagaagaagcacacttcaaggtcccaagtcaacaccgccaaaccaacccaagtgggtt 11979252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 22193361 - 22193419
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  22193361 agagaatcgaacctaagaccttgaggaggagcacactcccaggccccaagtcaacacca 22193419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 6530884 - 6530800
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttagggtca 96  Q
    |||||| |||||| |||| ||||| ||||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  6530884 gagaatcgaacctgagacattgag-aggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggttaaggtca 6530800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 16852425 - 16852340
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| |||||| ||||||||||| ||||| |||||||||| ||| ||||  || ||||||||||||||||    
T  16852425 cactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 2203570 - 2203494
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    ||||||||| ||| |||||||||||||||||| ||||| |||||||||| ||| ||||  || ||||||||||||||    
T  2203570 gagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19703475 - 19703563
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||  |||||| |||||| |||||||||||||||||| ||||  |||||||||| ||| ||||  || ||||||||||||||||    
T  19703475 tgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 43533717 - 43533797
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    ||||||||||| | ||||||||||||  |||| ||||||||||| |||| |||||||| |||| | |||||||||||||||    
T  43533717 gagaattgaacgtgagaccttgaggataagcacactccaaggtctcaagccaacaccaccagatccacccaagtgggttag 43533797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 968441 - 968362
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||| ||||||||||| ||||| |||||||||| ||| |||| ||| ||||| ||||||||||    
T  968441 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 6536599 - 6536541
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||||||| ||| ||||    
T  6536599 agagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatacca 6536541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 32992843 - 32992778
Alignment:
Q  26 gaccttgaggaggagcatactccaaggtcc--caagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||||| ||||||||||||  |||| ||||| || ||||||||||||||||||||    
T  32992843 gaccttgaggaggagcacactccaaggtcccacaagccaacatcaccagaccaacccaagtgggtt 32992778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 3624659 - 3624582
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    ||||||| |||||| ||||||||| |||||||| ||||| |||||||||| ||| ||||  || ||||||||||||||    
T  3624659 agagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 18897243 - 18897166
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||| | |||||||||||||||||| |||| ||||||||||  ||||||||  || ||||||||||||||||    
T  18897243 agaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 22268946 - 22269009
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| || |||| |||||||||||||||| |||||||| ||| ||||||||||||||||    
T  22268946 agaccttgagaag-agcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 22269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 18540377 - 18540298
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| ||||||||||||| || | ||||| |||||||||| ||| ||||  || ||||||||||||||||    
T  18540377 agagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 1458436 - 1458371
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||  ||||| |||||| |||||    
T  1458436 agaccttgag-aggagcatactccaaggtcccaaatcaacaccaccaagccaacacaagtgagttag 1458371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 2428143 - 2428078
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||  ||||| |||||| |||||    
T  2428143 agaccttgag-aggagcatactccaaggtcccaaatcaacaccaccaagccaacacaagtgagttag 2428078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 25389531 - 25389477
Alignment:
Q  14 aattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||| ||| ||||    
T  25389531 aattgaacctaagatcttgaagaggagcatactcctaggtcccaagccaatacca 25389477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 28783138 - 28783060
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||| | |||||||||||||||||| ||||| ||||| |||| ||| |||| ||  ||||||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11492061 - 11492146
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    ||||||| |||||||| ||||||||||||| ||| ||||||| ||||| || || |||| ||| ||| |||  |||||||||||||    
T  11492061 tgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccgacatgccaacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 35287795 - 35287715
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||| | | |||||||||||||||| |||||||  || |||| |||||||| ||| || ||||||||||||||    
T  35287795 agagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtta 35287715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44780102 - 44780190
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| || ||||  ||||| |||||||||||||||||| ||||| | |||||||| |||  |||  || ||||||||||||||||    
T  44780102 tgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 18546360 - 18546435
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||| |||||| |||||| |||||||||||| |||  ||||||||| |||| ||||  ||||||||| ||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagaccaacctaagtgg 18546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  34 ggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| ||||| |||||||||||||| ||||  || ||||||||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 29858049 - 29858124
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggt 88  Q
    |||| |||||| |||||| ||||||||||| |||||  ||||||||| ||| |||| ||| |||| ||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 8059710 - 8059632
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||||||||||| || ||||  |  | ||||||||| |||| ||| ||||||||||||||||    
T  8059710 gagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11819864 - 11819806
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    |||||||| || |||| |||||| |||||||||||||||||| ||||| | ||||||||    
T  11819864 tgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaag 11819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 17727448 - 17727502
Alignment:
Q  35 gaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| ||||  ||||| |||||||||||||  |||||||||||||||||||    
T  17727448 gaggagcacactctgaggtctcaagtcaacaccacgagaccaacccaagtgggtt 17727502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27750818 - 27750760
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    |||||||| || |||| |||||| |||||||||||||||||| ||||| | ||||||||    
T  27750818 tgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaag 27750760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27979245 - 27979184
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtca 62  Q
    |||||||| ||| ||| |||| |||||| |||||||||| || ||||||||||| |||||||    
T  27979245 tgacactagagataatcgaacttaagactttgaggaggaacaaactccaaggtctcaagtca 27979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28036514 - 28036453
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtca 62  Q
    |||||||| ||| ||| |||| |||||| |||||||||| || ||||||||||| |||||||    
T  28036514 tgacactagagataatcgaacttaagactttgaggaggaacaaactccaaggtctcaagtca 28036453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 29431092 - 29431011
Alignment:
Q  8 aaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| |||||| || |||  |||||||||| ||||| | |||||||| ||| |||  ||| ||||||||||||||||    
T  29431092 aaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 3058045 - 3058125
Alignment:
Q  9 aagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| |||||| ||||||||  |||||||| ||||| | | |||||  ||| |||| ||||||||||||| ||||||    
T  3058045 aagagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaacccaaatgggtt 3058125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 6436567 - 6436631
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| ||||||||| ||||| | |||||||| ||| |||| |||  |||||||||||||||    
T  6436567 agaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 23874387 - 23874459
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| ||||||| ||| | ||| |||||||||| ||| ||||  || |||||||||||||||||    
T  23874387 gaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtta 23874459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 33017293 - 33017213
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| |||||||||||||||||| ||| | |||| ||||| ||| |  |  || |||||||||||||||||    
T  33017293 agagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaacccaagtgggtta 33017213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 40872955 - 40872875
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||||| ||||||| |||||||| |||| ||| ||| || |||| | || ||  |||||||||||||||||    
T  40872955 agagaatggaacctaaaaccttgaagaggagcacactctaagatcctaaatcaatatcaccatgccaacccaagtgggtta 40872875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 40888879 - 40888831
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    ||||||||||| ||| |||||||||||||||| |||||| ||| |||||    
T  40888879 gagaattgaacataaaaccttgaggaggagcaaactccagggttccaag 40888831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 24334023 - 24334101
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| | | ||||||||||||||||    
T  24334023 gagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagccaacaccatccggccaacccaagtgggtt 24334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 33549183 - 33549104
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||| ||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  33549183 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 24507533 - 24507605
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||  || |||||||||    
T  24507533 agagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 24507605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 14558040 - 14557962
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||  ||||||||||| ||| | |||||||||| |||||||| ||||||||||||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 12253784 - 12253707
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||||||||||||||||| ||||| ||||||| ||| ||| |||||||| |||  |||||||||||||||    
T  12253784 agaatcgaacctaagaccttgaggagcagcatgctccaagatcctaagccaacaccatcaggtcaacccaagtgggtt 12253707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 34444881 - 34444809
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaag 83  Q
    |||||| |||||| |||||||| ||||||||| |||| ||||||||||||||| |||| ||| ||||||||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 6691548 - 6691621
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagt 84  Q
    ||||||| |||||| |||||||||| ||||||| |||||||||||  |||||||||||| ||| |||||||||||    
T  6691548 agagaatcgaacctgagaccttgag-aggagcacactccaaggtctaaagtcaacaccaccaggccaacccaagt 6691621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 28028607 - 28028530
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||| | |||||||||| ||||||  |||| |||||||||||||||||||| ||| ||||||||||||||||    
T  28028607 gagaatcgaacatgagaccttgag-aggagctcactcaaaggtcccaagtcaacaccaccaggccaacccaagtgggtt 28028530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 31622997 - 31623067
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||| ||||||||||| ||||| |||||||||| ||| |||| | ||||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 12188294 - 12188379
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| ||||||| |||| | | |||||||||||||||| ||||| |||||||||| ||| ||||  || ||||||||||||||||    
T  12188294 cactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 22564260 - 22564321
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    ||||||||||||||||||| ||||||| |||||||  |||||||  ||||||||||||||||    
T  22564260 agaccttgaggaggagcatgctccaagctcccaaggtaacaccactagaccaacccaagtgg 22564321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 10338174 - 10338246
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    |||| |||||| |||||||||||||||||| ||||| |||||||||| ||| |||| ||  ||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12234495 - 12234583
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||  ||||||| |||||| |||||| |||  |||||| ||||| |||||||||||||| |||| ||| |||||| |||||||||    
T  12234495 tgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 1906570 - 1906503
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacc 79  Q
    ||||| |||| | |||||||||||||||||||| ||||| |||||||||||| |||| ||||| ||||    
T  1906570 agaatcgaacttgagaccttgaggaggagcataatccaatgtcccaagtcaataccatcagactaacc 1906503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 3809532 - 3809583
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaa 63  Q
    ||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||    
T  3809532 agaattgaatctaagaccttgaggaagagcacacttcaaggtcccaagtcaa 3809583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 30127477 - 30127399
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||| |||||| |||||| || |||||||| ||||| ||  |||||| ||| |||| |||||||||||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtta 30127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32613128 - 32613214
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    ||||||| |||||||| |||| | ||| |||||| ||||||| ||||| ||  |||||||||| |||| ||| ||||||||||||||    
T  32613128 tgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11423654 - 11423565
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||  ||| ||| |||||| |||||| |||||| |||||||||| |  ||||||||||| |||| ||||||| |||||| ||||||    
T  11423654 tgacactggagaaaatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtta 11423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 3172758 - 3172818
Alignment:
Q  3 acactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaa 63  Q
    |||||||||| ||| ||| || |||||| || |||||||||||||| ||||||||||||||    
T  3172758 acactaaagaaaatcgaatctgagacctcgatgaggagcatactcccaggtcccaagtcaa 3172818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 6384005 - 6384056
Alignment:
Q  15 attgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacc 67  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||| |||||||    
T  6384005 attgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacacc 6384056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 19088444 - 19088508
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||||||| | |||||||| ||| ||| |||||||| |||||||||||| ||||||| |||||    
T  19088444 gaacctaagatcatgaggaggtgcacacttcaaggtcctaagtcaacaccatcagaccagcccaa 19088508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 24762413 - 24762476
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||||||||||| || ||||||| || ||||||||||||| ||||||||  ||||||||||||    
T  24762413 gaacctaagaccttaag-aggagcacacaccaaggtcccaagccaacaccattagaccaacccaa 24762476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 20863439 - 20863396
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||    
T  20863439 agaccttgaggaggagcacactccaaagtcccaagccaacacca 20863396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 23242049 - 23241987
Alignment:
Q  26 gaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||| | ||||| |||||||||| ||||| || ||| ||||||||||||||||    
T  23242049 gaccttgaggaggagtacactccgaggtcccaaggcaacatcaccag-ccaacccaagtgggtt 23241987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 6385941 - 6385883
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||||| |||||| ||||||| |||||||||| | ||| |||||||||||||| ||||    
T  6385941 agagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatacca 6385883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20213129 - 20213071
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    |||||||| || |||| |||||| |||| ||||||||||||| ||||| ||||||||||    
T  20213129 tgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaag 20213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22107152 - 22107094
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    |||||||| || |||| |||||| |||| ||||||||||||| ||||| ||||||||||    
T  22107152 tgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaag 22107094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 23910116 - 23910158
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagt 60  Q
    |||||| |||||||||||||||||| ||||| |||||||||||    
T  23910116 gaacctgagaccttgaggaggagcacactcccaggtcccaagt 23910158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 24641188 - 24641266
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| | |||| ||||||||||| ||||| || ||||||||||| |||| ||  ||||||||| ||||||    
T  24641188 gagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 34026531 - 34026486
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaac 64  Q
    ||||| |||||||||||| ||||| |||||||||||| ||||||||    
T  34026531 aacctgagaccttgaggatgagcaaactccaaggtcctaagtcaac 34026486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 22684 - 22747
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| || |||| |||||||||||||||| ||| ||||  || ||||||||||||||||    
T  22684 agaccttgagaag-agcacactccaaggtcccaagccaaaaccactagcccaacccaagtgggtt 22747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 1056682 - 1056762
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||| ||| |||||||||| ||||||||||| | |||||| | ||| ||||  ||  ||||||||||||||||    
T  1056682 agagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccactaggtcaacccaagtgggtta 1056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 18316497 - 18316573
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggt 88  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||||||| || ||||| |||||||||||||||||||    
T  18316497 gagaatcgaacctaagaccttgag-aggagcacactccaaggtcccaagccagcaccaccagaccaacccaagtgggt 18316573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 53863865 - 53863943
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| || |||  |||||||||||||||    
T  53863865 agagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggacaacccaagtgggtt 53863943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 13164757 - 13164836
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||||| |||  ||| | ||||||||||    
T  13164757 gagaattgaacctaagaccttgaggagtagcacactccaaggtccaaagccaacaccaccaggtcaatcaaagtgggtta 13164836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 26871510 - 26871580
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||| ||||||||||| | |||||||||||||||| |||||||| ||| ||||||||||||||||    
T  26871510 aacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26871580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 37788456 - 37788541
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| ||||||| |||||| |||||||||||||||||| ||||| |||| ||||||||| ||||   | ||||||||||||||||    
T  37788456 cactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 42799753 - 42799821
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||||||| ||| ||||||||||||||    
T  42799753 gaacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 3055065 - 3054993
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| ||| ||||||||| ||||  ||||||||||||||| |||||||| ||| |||||||||||||||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaacccaagtgggtta 3054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 14186726 - 14186647
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  14186726 agagaatcgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36720469 - 36720381
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| ||||||| |||||| | |||| ||||||||||| ||||| |  ||||||| ||| |||| ||||||||||||||||||||    
T  36720469 tgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 53413024 - 53412948
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||  |||| ||| ||||  ||||||||||||||||    
T  53413024 agagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 15034422 - 15034348
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    ||||||||||||| |||||||||| |||| ||  ||||||||||||||| |||||||| ||| |||||||||||||    
T  15034422 gagaattgaacctgagaccttgag-aggatcaccctccaaggtcccaaggcaacaccaccaggccaacccaagtgg 15034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13808873 - 13808958
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    ||||| || |||||||||||||| |||||| ||||||||||| ||| | || ||||||||||| |  | |||||||||||||||||    
T  13808873 tgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30510187 - 30510272
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||||| ||||||| |||||| |||||| ||| ||||||||||||| |||||||||| ||  |||| |||  ||||||||||||    
T  30510187 tgacactagagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4222229 - 4222141
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| | ||||||| ||||||||||| ||||||||||||| ||||| || ||||||| ||| ||||  |  ||||||||||||||||    
T  4222229 tgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 4844508 - 4844580
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    ||||||| || ||| |||||| ||||||||||| ||||| || ||||||||||| |||| |||||||||||||    
T  4844508 agagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 4870204 - 4870276
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    ||||||| || ||| |||||| ||||||||||| ||||| || ||||||||||| |||| |||||||||||||    
T  4870204 agagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 31510739 - 31510795
Alignment:
Q  34 ggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||||| | |||||||||||| |||| |||||||||| ||||||||||    
T  31510739 ggaggagcatactcccaagtcccaagtcaataccaccagaccaacctaagtgggtta 31510795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31520593 - 31520681
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||  |||||||  |||||||||||| ||||||||||| ||||| || ||||||| |||  ||| ||| ||||||||||||||||    
T  31520593 tgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 40286854 - 40286934
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||  ||| ||||| ||||||||||| || |||||||| || ||||  ||||||| |||||||||||||||||||||    
T  40286854 agagaatgaaacataagatcttgaggaggaccacactccaagatctcaagcgaacaccaccagaccaacccaagtgggtta 40286934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 42430400 - 42430334
Alignment:
Q  22 ctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||| ||||||| |||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  42430400 ctaagaccttgag-aggagcacactccaagatcccaagtcaataccaccag-ccaacccaagtgggtta 42430334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 40883318 - 40883275
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||    
T  40883318 agaccttgaggagcagcatactccaaggttccaagtcaacacca 40883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5499405 - 5499483
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| |||||||||| ||||  || || |||||||| |||| ||| ||||||||||||||||    
T  5499405 gagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28531046 - 28531104
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    |||||| | |||||||||| |||||||||| ||||||||||||||||| || |||||||    
T  28531046 tgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaag 28531104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 35981684 - 35981762
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||||| |||||||||| |  |||| |||||||  |||||||| || | |||||||||| ||||    
T  35981684 gagaattgaacctaagaccttaaggaggagcacataccaaagtcccaaaccaacaccaccaaaacaacccaagtaggtt 35981762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 40268566 - 40268489
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| || ||||||  |||||||||||||||| |||||||| ||| | ||||||||||||||    
T  40268566 gagaatcgaacctgagaccttaag-aggagcccactccaaggtcccaagccaacaccaccaggcaaacccaagtgggtt 40268489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 40777097 - 40777013
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||| |||||||  ||||| |||||||||| ||||||| ||||||| |||||| | |||||||| |||| ||||||||||||||||    
T  40777097 cactagagagaatcaaacctgagaccttgag-aggagcacactccaatgtcccatg-caacaccaccagatcaacccaagtgggtta 40777013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 47079770 - 47079701
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||| || |||| || | |||||| ||||||| |||||||| ||||||||||||||||||||    
T  47079770 aacctaagaccttaag-aggaacacattccaagatcccaagccaacaccaccagaccaacccaagtgggtt 47079701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 54990780 - 54990726
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaaca 65  Q
    |||||| |||||| ||||||||||||||||||  ||||||||||||||| |||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaaca 54990726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 353155 - 353228
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagt 84  Q
    |||||| |||||| ||||||||||||| || ||||| ||||||||| || |||| ||| ||| |||||||||||    
T  353155 gagaatcgaacctgagaccttgaggagaagaatactacaaggtccctagccaacgccaccaggccaacccaagt 353228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 19716275 - 19716218
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||| |||||  |||||||||||||||||| |||||| ||||||||| ||||||||    
T  19716275 gagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaacacca 19716218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 30311387 - 30311306
Alignment:
Q  8 aaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| |||||| |||||||||||||||||| ||||| || ||||||| | | ||||  || |||||||| |||||||    
T  30311387 aaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 47454615 - 47454692
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggt 88  Q
    |||||| |||||| |||||| ||||||||||| |||||||| || |||| ||| ||||  ||| ||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 8051278 - 8051214
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||| | |||||||||| ||| |||| ||| ||||||||||||||||    
T  8051278 agacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 16212972 - 16213048
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| | ||||||| |||||||||| ||||| | ||| |||| ||||| ||  |||||||||||||||||||    
T  16212972 gaattgaacttgagaccttaaggaggagcacactcccaagtctcaaggcaacatcattagaccaacccaagtgggtt 16213048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 34844446 - 34844371
Alignment:
Q  13 gaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||| |||||| |||||||||| ||||||| ||||||||||| |||| ||||| || |||  |||||||||||||||    
T  34844446 gaatcgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacaacaccagggcaacccaagtgggtt 34844371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 45308890 - 45308974
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    ||||||| |||| ||| |||||| |||||| ||||||||||||||||  | |||||||  ||| |||| |||| |||||||||||    
T  45308890 tgacactgaagataatcgaacctgagacctcgaggaggagcatactcacaagtcccaaaccaataccaccagaacaacccaagtg 45308974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 51903875 - 51903955
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| |||||  ||||||||||| ||||| || ||||||| ||| ||||||||  ||||||| ||||||||    
T  51903875 agagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 10499106 - 10499185
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| ||||||  |||| ||||| ||||| || ||||||| ||| |||| ||| ||||||||||||||||    
T  10499106 agagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 16354889 - 16354968
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| ||||| |||||||||||| ||||  |||| ||||| ||| ||||  || ||||||||||||||||    
T  16354889 agagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 27093358 - 27093437
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||  ||||| |||||||||||||||||| ||||| | || ||||| ||| ||||  || ||||||||||||||||    
T  27093358 agagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32651426 - 32651493
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||||| ||||||| ||| || ||| |||||||||||||| ||||| |||||||||| ||| ||||    
T  32651426 tgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaatacca 32651493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 12761568 - 12761510
Alignment:
Q  33 aggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    ||||||| || ||||| |||||||||||||| |||| |||||||||||| | |||||||    
T  12761568 aggaggaacacactcccaggtcccaagtcaataccaccagaccaacccatgcgggttag 12761510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 13347906 - 13347956
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||||||||| |||||||| |||| |||||||||||| ||| ||||||||    
T  13347906 gaacctaagactttgaggagtagcacactccaaggtccaaagccaacacca 13347956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 47810756 - 47810822
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggttag 91  Q
    |||||||| ||||||||| ||||| | | || ||| ||| |||| ||||||||||||||||||||||    
T  47810756 agaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaacccaagtgggttag 47810822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 5166506 - 5166449
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||| |||||| ||| ||||||||| |||| ||||||||||| ||| |||||||||    
T  5166506 gagaatcgaacctgagatcttgaggagcagcacactccaaggtctcaaatcaacacca 5166449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 10445136 - 10445185
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    ||||||| |||||| |||||| ||||||||||| ||||| ||||||||||    
T  10445136 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaag 10445185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 16900679 - 16900732
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaac 64  Q
    |||||| |||| | ||||||||| |||||||| |||||||||||||||| ||||    
T  16900679 gagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagccaac 16900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 35623279 - 35623345
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacacc---aacagaccaacccaagtgggtt 89  Q
    |||||||||| ||||||| |||||||||||||||| |||||||   | ||| ||||||||||||||||    
T  35623279 agaccttgag-aggagcacactccaaggtcccaagccaacaccacaaccaggccaacccaagtgggtt 35623345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 38550400 - 38550473
Alignment:
Q  9 aagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    ||||||||||||||| ||||||  |||||||||| ||||| |   || ||||||| |||||||| |||||||||    
T  38550400 aagagaattgaacctcagacctcaaggaggagcacactcccaaaccctaagtcaataccaacaggccaacccaa 38550473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 44069828 - 44069779
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||| |||||||||||||||||| |||||||| || |||| ||||||||    
T  44069828 aacctgagaccttgaggaggagcacactccaagatctcaagccaacacca 44069779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 7975488 - 7975448
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    |||||||||||||||||||||||| ||||| || |||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaag 7975448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 10682942 - 10683017
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    ||||||||||||| |||| ||||| || |||| ||||||||||| |||| ||| ||||  ||| |||||||||||||    
T  10682942 gagaattgaacctgagactttgag-agaagcacactccaaggtctcaagccaataccactagatcaacccaagtggg 10683017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 11092182 - 11092245
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| || |||| ||| |||||||||||| ||||||||  || ||||||||||||||||    
T  11092182 agaccttgag-agtagcacactacaaggtcccaagccaacaccactaggccaacccaagtgggtt 11092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 17035064 - 17034991
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||| |||||| |||||||||||| |||||  |||  || ||||||||||| |||| |||| ||||||||||||    
T  17035064 gagaatcgaacctgagaccttgaggatgagcactctc--agatcccaagtcaataccaccagagcaacccaagtgg 17034991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 32106645 - 32106565
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| || || |||||||||||  |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  32106645 agagaatcgagcccaagaccttgagagggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtta 32106565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 40416387 - 40416467
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| ||||||| |||||||||||||||| |||| ||||||||| ||||  || |||||||||||||||||    
T  40416387 agagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 42327391 - 42327471
Alignment:
Q  9 aagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||| ||||  || ||||||||||||||||    
T  42327391 aagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 19244188 - 19244109
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||||| ||||||||| ||||  |||||||||||||| ||||  |||||||||||||||||||    
T  19244188 agagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 37480153 - 37480075
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||||||||||||| ||||  |||||||||| ||| |||| ||| ||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 39715070 - 39714992
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| ||||||||||| ||||| |||||||||||||| |||| ||  ||||||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 45672376 - 45672454
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||| |||||| |||||||| |||||||||||||| |||| ||| ||||  || ||||||||||||||||    
T  45672376 gagaattgaacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaacccaagtgggtt 45672454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 30359718 - 30359657
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||  |||||||||||||    
T  30359718 agaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 42602633 - 42602554
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||  |||||||||||||||| ||||||| ||||| |||||||||| ||| ||||  || ||||||||||||||||    
T  42602633 agagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 3697398 - 3697475
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||  |||||||||| |||||||  ||||||||||||||| ||| |||| ||||||||||||||||||||    
T  3697398 gagaatcgaaccagagaccttgag-aggagcactctccaaggtcccaagccaataccatcagaccaacccaagtgggtt 3697475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 29503349 - 29503271
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||||||||||||| ||||| |||||||||  ||| ||||  || ||||||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 45672227 - 45672305
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||| |||||| |||||||| |||||||||||||| |||| ||| ||||  || |||| |||||||||||    
T  45672227 gagaattgaacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaatccaagtgggtt 45672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 5147691 - 5147756
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||| ||||||||||||| || || |||||||| ||||  ||||||||||||||||||||    
T  5147691 agaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtta 5147756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 41908650 - 41908715
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||||||||||| ||||||||||| |||  | |||||| ||| |||||||||||||||||    
T  41908650 agaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgggtta 41908715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 30808643 - 30808723
Alignment:
Q  9 aagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| ||| || |||||||||||||||||||| ||  ||||| |||| ||| | || ||||||||||||||||||||    
T  30808643 aagagaatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaagtgggtt 30808723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 41202325 - 41202257
Alignment:
Q  14 aattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    ||||||||||||||| | ||||||||||||||||| || || || ||||| |||| |||||||||||||    
T  41202325 aattgaacctaagacttcgaggaggagcatactcccagatctcaggtcaataccaccagaccaacccaa 41202257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 16525255 - 16525177
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| |||||||||| ||  ||| ||||||| |||||||| |||||||| ||| |||||||||||||||||    
T  16525255 gagaatcgaacctgagaccttgag-agtcgcacactccaacgtcccaagccaacaccatcaggccaacccaagtgggtta 16525177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 23052521 - 23052600
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| ||||||||||||| |||| ||||| | |||||||| ||| |||| ||| |||||| ||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtta 23052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 12517765 - 12517833
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaag---tcaacaccaacagaccaaccc-aagtgggtt 89  Q
    |||||||||||||||||| ||||||||||||||||    |||||||| ||||||||||| |||||||||    
T  12517765 agaccttgaggaggagcaaactccaaggtcccaagccaacaacaccaccagaccaacccgaagtgggtt 12517833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 16918575 - 16918653
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggt 88  Q
    |||||||  |||||||||||||||||||||||| ||||| || ||||||  ||| ||||  || |||||||||||||||    
T  16918575 agagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 12994388 - 12994453
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||||  |||||||| |||| ||||||    
T  12994388 agaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtta 12994453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 13747640 - 13747688
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  13747640 aacctgagaccttg-ggaggagcatactccaaggtcccaagccaacacca 13747688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 19016095 - 19016031
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| ||||||||||| ||||| | ||| |||| ||| |||| ||||||||||||||||||||    
T  19016095 agacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 27244394 - 27244334
Alignment:
Q  3 acactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaa 63  Q
    ||||| |||||||| |||||| | |||| ||||||||||||||||| ||||||||| ||||    
T  27244394 acactgaagagaatcgaaccttaaacctcgaggaggagcatactcccaggtcccaaatcaa 27244334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28846762 - 28846690
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||| | ||||||||||| ||||| |||||||||||||| ||||  ||| ||||| ||||||||||    
T  28846762 gaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtta 28846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 42922494 - 42922414
Alignment:
Q  10 agagaattgaacctaagacctt-gaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| ||||||| ||||||||||| ||||| |||| ||||| ||| ||||  || ||||||||||||||||    
T  42922494 agagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 43964001 - 43964064
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| ||||||| |||||||||||||||  |||||| |  |||||||||||||||||||    
T  43964001 agaccttgag-aggagcacactccaaggtcccaaaccaacactactagaccaacccaagtgggtt 43964064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 1729883 - 1729816
Alignment:
Q  22 ctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| ||||||||||| ||||| | |||||||| ||| ||||  || ||||||||||||||||    
T  1729883 ctaagacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 329278 - 329224
Alignment:
Q  35 gaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||| |||||| || | |||| ||||||||||||||||| |||||||||||    
T  329278 gaggagcacactccatggccacaagccaacaccaacagaccaatccaagtgggtt 329224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 342472 - 342395
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||| | |||||||| | | ||| | ||||||||||| |||| |||||||| ||| ||||||||||||||||    
T  342472 gagaattgaacttgagaccttgcg-atgagtacactccaaggtcacaagccaacaccaccaggccaacccaagtgggtt 342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 21213847 - 21213777
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaaccca 81  Q
    |||||| |||||| ||||||  ||||||| || ||||| |||||||||| ||| |||| ||||||||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 33839259 - 33839305
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaa 58  Q
    |||||||||||| |||||||||||||||||| ||||| | |||||||    
T  33839259 agaattgaacctgagaccttgaggaggagcacactcccatgtcccaa 33839305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 34041594 - 34041664
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||||||||||||||| ||||  || ||| ||||||| ||||  || ||||||||||||||||    
T  34041594 aacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 36317429 - 36317467
Alignment:
Q  51 ggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  36317429 ggtctcaagtcaacaccatcagaccaacccaagtgggtt 36317467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 4262299 - 4262348
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    ||||||| |||||| |||||||||||||||||| ||| | ||||||||||    
T  4262299 agagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaag 4262348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 6099517 - 6099569
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaac 64  Q
    |||||| |||||| |||||||||| ||||||| |||||||||||||||| ||||    
T  6099517 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaac 6099569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 18825404 - 18825340
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||| ||||||| ||||| |||||||||| |||||||| |||   |||||||||||||||    
T  18825404 agaccttgag-aggagcacactcctaggtcccaagccaacaccaccaggtaaacccaagtgggtta 18825340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 19322853 - 19322768
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||||  ||||  ||||||||| |||||||| ||||| |||||||||  ||| ||||  ||| |||||||||||||||    
T  19322853 cactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggtt 19322768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 26176324 - 26176380
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||| ||| || |||||||||| ||||||| || ||||||||||||||||||||||    
T  26176324 gagaatcgaatctgagaccttgag-aggagcacaccccaaggtcccaagtcaacacca 26176380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 26276426 - 26276377
Alignment:
Q  18 gaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacc 67  Q
    |||||| |||||||||||||||||| ||| ||||| |||||| |||||||    
T  26276426 gaacctgagaccttgaggaggagcacactacaaggccccaagccaacacc 26276377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 4438992 - 4439056
Alignment:
Q  26 gaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||||||| ||||  || |||||||| || ||||  || |||||||||||||||||    
T  4438992 gaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtta 4439056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23230593 - 23230680
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||  ||||||||||||||   || ||||||||||||| ||||| || |||||| |||| ||| || ||||||||||| ||||||    
T  23230593 tgacactggagagaattgaacctggaactttgaggaggagcacactcccagttcccaaatcaatacc-actgaccaacccaattgggtt 23230680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 29197396 - 29197452
Alignment:
Q  33 aggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| ||||| | |||||||||||| |||| ||  ||||||||||||||||    
T  29197396 aggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 31681127 - 31681071
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacc 67  Q
    |||||| |||||| |||| |||||||| |||| ||||||||||| |||| |||||||    
T  31681127 gagaatcgaacctgagactttgaggagaagcacactccaaggtctcaagccaacacc 31681071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 36176814 - 36176758
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    |||||||||| ||| |||||||||||||| |||||| |||||| |||  ||||||||    
T  36176814 agaattgaacttaataccttgaggaggagtatactcaaaggtctcaaagcaacacca 36176758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 41138387 - 41138327
Alignment:
Q  29 cttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||| |||   |||| | |||||||||||| || |||||||||||||||||    
T  41138387 cttgaggaggagcacactttcaggttctaagtcaacaccaccataccaacccaagtgggtt 41138327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 45026807 - 45026743
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||||||| ||||| | || ||||||||  || || ||||||| |||||||||||    
T  45026807 agaccttgaggaggagcacactcctaagttccaagtcattactaatagaccaaaccaagtgggtt 45026743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 15320 - 15399
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||| ||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  15320 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 15581140 - 15581218
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||| ||||||| || ||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  15581140 gagaattgaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtta 15581218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 45266912 - 45266833
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| |||||| |||||||||||||||||| ||||||| | |||||||||||||| |||| ||||| |||||||||||    
T  45266912 gagaatcgaacctgagaccttgaggaggagcaaactccaaagccccaagtcaacaccgacaggccaactcaagtgggtta 45266833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 4825041 - 4824975
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtg 85  Q
    ||||| ||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  4825041 aacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaagtg 4824975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 37047054 - 37046985
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  37047054 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggtt 37046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 9165192 - 9165272
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||||||| |||| ||||||||||||| ||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  9165192 agagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 9165272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 19940869 - 19940948
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||  ||||| ||||||| |||||||||| ||||||||| ||||||  ||||||| ||||||||||||||||||||    
T  19940869 agagaatcaaacctgagaccttaaggaggagcacactccaaggacccaagctaacaccaccagaccaacccaagtgggtt 19940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15786308 - 15786393
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||| ||||||||| |||||| |||||||||||||||||| ||||| || ||||||| ||| || |  ||||||||||||||||    
T  15786308 tgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 36371549 - 36371470
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||| ||||| ||| ||||  || ||||||||||||||||    
T  36371549 agagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 36428776 - 36428717
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagt 84  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| | | |||||||||||    
T  36428776 agaccttgaggaggagcatactccaaggtaccaagccaacaccacccggccaacccaagt 36428717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 51814573 - 51814494
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||||||||||||||||| ||||  || || |||||||| |||| ||| ||||||||||||||||    
T  51814573 agagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 52116779 - 52116858
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||| |||| ||||||||||||| ||||| | |||||||| ||| |||| ||| ||||||||| |||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtta 52116858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 16169976 - 16170054
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| | ||||||||||||| || ||||| |||||||||||||| |||| ||| | ||||||||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 19528325 - 19528403
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||||||||||||| ||||  || ||||||| ||| |||| ||| ||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 31605846 - 31605924
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||| | |||||||||||||||||| ||| |||||||||||| |||||||| ||| |||||  |||||||||    
T  31605846 gagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacaccatcaggccaacataagtgggtt 31605924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 40257476 - 40257399
Alignment:
Q  12 agaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| | |||||| ||||||||||| ||||| ||||| |||| ||| |||| ||| ||||||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 9570707 - 9570644
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||| ||||| ||||||||||| |||| |||||||| ||| ||||||||||||||||    
T  9570707 agaccttgaggaagagcacactccaaggtctcaagccaacaccatcag-ccaacccaagtgggtt 9570644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 10526902 - 10526822
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| ||| || |||||||||||||||||| ||||| |||||||||| ||| ||||   ||||||||||| |||||||    
T  10526902 agagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggtta 10526822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 24019101 - 24019021
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatact-ccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| ||||||||||||||||||||||||| ||| | |||| |||||| |||||||  | | |||||||||||||||||    
T  24019101 gagaatcgaacctaagaccttgaggaggagcacactacaaaggacccaagccaacacctccgggccaacccaagtgggtta 24019021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 43446041 - 43445969
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaag 83  Q
    |||||| |||| | |||||||||||||||||| ||||||||| |||||| |||||||| ||  ||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaacaccatcaagccaacccaag 43445969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 30203224 - 30203279
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaaca 65  Q
    |||||||||||||| |||||||||||||||| | ||| ||||| ||||||||||||    
T  30203224 agagaattgaacctgagaccttgaggaggagaacacttcaaggacccaagtcaaca 30203279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 17297048 - 17296986
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    |||||||||||||||||| ||||||||||||||||  | |||||  || ||||||||||||||    
T  17297048 agaccttgaggaggagcacactccaaggtcccaagctaccaccacaagcccaacccaagtggg 17296986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 17424503 - 17424561
Alignment:
Q  26 gaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagt 84  Q
    |||||| | |||||||||||||||||||| || || ||||||| |||||||||||||||    
T  17424503 gaccttaacgaggagcatactccaaggtctcacgttaacaccatcagaccaacccaagt 17424561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 39012360 - 39012291
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||||| || |||| |||||||||||||||| ||||||||  || |||||| |||||||||    
T  39012360 aacctaagaccttgagaag-agcacactccaaggtcccaagccaacaccactaggccaaccaaagtgggtt 39012291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 1094589 - 1094524
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||| | ||||||||| ||||  |||| ||||||||| ||||||| ||||||||||||||||||    
T  1094589 agacctcgtggaggagcacactcacaggttccaagtcaataccaacaaaccaacccaagtgggtta 1094524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 11063641 - 11063556
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| ||||||| |||||||||||||||||||||| || |||   |||||||||| ||| ||||  ||| |||||||| ||||||    
T  11063641 cactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaaatgggtt 11063556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 33700770 - 33700847
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtggg 87  Q
    ||||||| |||||| |||||||||||||||||| ||||| || | ||||| ||| ||||  || ||||||||||||||    
T  33700770 agagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 19480590 - 19480527
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||  || ||||||||| ||||||    
T  19480590 agaccttgag-aggagcacactccaagatcccaagtcaacaccataaggccaacccaaatgggtt 19480527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 31794276 - 31794340
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||||||| ||||| | |||||||| ||| ||||  || ||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 32916798 - 32916871
Alignment:
Q  8 aaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaag 83  Q
    ||||| |||| |||||||||||||||||||||||| |||||||  ||| ||||||| || |  |||||||||||||    
T  32916798 aaagaaaattaaacctaagaccttgaggaggagcacactccaa--tccaaagtcaatactactagaccaacccaag 32916871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 44126480 - 44126396
Alignment:
Q  4 cactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggt 88  Q
    ||||| |||||||  || || |||||| | ||||||||| ||||| |||||||| ||||| |||| ||| |||||||||||||||    
T  44126480 cactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 4566627 - 4566548
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| ||||| |||||||||||| ||||| |||| ||||| ||| | ||  || ||||||||||||||||    
T  4566627 agagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6122882 - 6122824
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaag 59  Q
    |||||||| || |||| |||||| |||||||||||||||||| ||||| | ||||||||    
T  6122882 tgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaag 6122824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 25297842 - 25297772
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||| |||||| ||||||||||| ||||  || ||| ||||||| ||||  |||||||||||||||||||    
T  25297842 aacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 3266003 - 3265950
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaa 63  Q
    ||||||| |||||| |||||||||||||||||| ||||| | || |||||||||    
T  3266003 agagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtcaa 3265950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20203935 - 20203886
Alignment:
Q  19 aacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||| |||| ||||| ||||||||||||||||||||||||  |||||||    
T  20203935 aacctgagactttgagaaggagcatactccaaggtcccaagctaacacca 20203886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 24857861 - 24857906
Alignment:
Q  44 actccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||| || |||||||| ||| ||||||||||||||||    
T  24857861 actccaaggtccctagccaacaccaccaggccaacccaagtgggtt 24857906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 45235398 - 45235455
Alignment:
Q  32 gaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||| ||||| | |||||||  ||| |||| ||||||||||||||||||||    
T  45235398 gaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggtt 45235455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6650683 - 6650595
Alignment:
Q  1 tgacactaaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| | ||||||| |||||| |||| |||||||||||||||||||  | ||||||| ||| ||||  || |||||| || ||||||    
T  6650683 tgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggtt 6650595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 27567134 - 27567198
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| |||||||| ||||  |||| ||||||||| | || | ||||||||||||||||||    
T  27567134 agaccttgaagaggagcacactctcaggttccaagtcaatatcatccgaccaacccaagtgggtt 27567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 41470623 - 41470686
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||| ||||||||||||||||||| |||| |||||||| | | |||||||  |||||||    
T  41470623 agaccttgag-aggagcatactccaaggtctcaagccaacaccaccgggccaacccgtgtgggtt 41470686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 41508895 - 41508831
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||||||||||||||| ||||| || ||||||  ||  |||| ||| ||||||||||||||||    
T  41508895 agaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 51703858 - 51703778
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| | || ||||||||||||| ||||| || | ||||| ||| ||||  |||||||||||| |||||||    
T  51703858 agagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtta 51703778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 1832 - 1760
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||  || |||||||||    
T  1832 agagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 15318 - 15398
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaag-gtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||| | ||||||||||||||||  ||||||  |||||||| |||||||| |||||||||||||||||||||    
T  15318 gagaattgaacctgacaccttgaggaggagcaagctccaaacgtcccaagccaacaccaccagaccaacccaagtgggtta 15398  T

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Target: scaffold0236 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 24852 - 24911
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagt 84  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||||||    
T  24852 agaccttgaggaggagcaaactccaaggccccaagtcaacaccaccaggccaacccaagt 24911  T

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Target: scaffold0002 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 142231 - 142152
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||||| |||  ||| | ||||||||||    
T  142231 gagaattgaacctaagaccttgaggagtagcacactccaaggtccaaagccaacaccaccaggtcaatcaaagtgggtta 142152  T

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Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 94972 - 95044
Alignment:
Q  14 aattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    |||||||||| |||||||||||||||||| ||||| |||| ||||| ||| ||||  || |||||||||||||    
T  94972 aattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0065 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 12268 - 12196
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaa 82  Q
    |||||||| ||| | |||||||||||||||||| |||||||||||||||| ||||||||  || |||||||||    
T  12268 agagaatttaactttagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 12196  T

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Target: scaffold0118 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 41630 - 41710
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||||||| |||||| ||||||||||||||||  || || |||| ||| ||||  || |||||||||||||||||    
T  41630 agagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtta 41710  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 77678 - 77619
Alignment:
Q  31 tgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    |||||||||||| ||||||| |||||||  |||||||| |||||||| ||||||||||||    
T  77678 tgaggaggagcacactccaaagtcccaaaccaacaccatcagaccaatccaagtgggtta 77619  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 240898 - 240960
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggt 88  Q
    |||||||||| |||||||||||||||| ||||||  |||||||| |||||||||| ||||||||    
T  240898 agaccttgag-aggagcatactccaagatcccaaaccaacaccatcagaccaaccaaagtgggt 240960  T

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Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 19959 - 20017
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacacca 68  Q
    ||||||| |||||| |||||||||||||||||||||||| |||| ||||| ||| ||||    
T  19959 agagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaatacca 20017  T

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Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 42515 - 42596
Alignment:
Q  8 aaagagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||| |||||| ||||  |||||||||||||||||| || | ||||||||| ||||  || ||||||||| ||||||    
T  42515 aaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

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Target: scaffold0070; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 38927 - 38975
Alignment:
Q  38 gagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgg 86  Q
    ||||||||||| |||||||||| ||| |||| |||||||||||||||||    
T  38927 gagcatactcctaggtcccaagccaataccaccagaccaacccaagtgg 38975  T

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Target: scaffold0172 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 15789 - 15853
Alignment:
Q  25 agaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||||||||||  ||||||| ||| |||| ||| |||||  |||||||||    
T  15789 agaccttgaggaggagcatactccaaaatcccaagccaataccaccaggccaacttaagtgggtt 15853  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 17141 - 17061
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtta 90  Q
    ||||||| |||||| | | ||||| ||||| || |||| ||  |||||||||||||||| ||||||||||||| |||||||    
T  17141 agagaatcgaacctgaaatcttgaagaggaacacactctaaactcccaagtcaacaccagcagaccaacccaaatgggtta 17061  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 14969 - 15047
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||| ||||||||||||||||||| || ||| ||| ||| | || ||||| ||||||||||||||    
T  14969 agagaatcgaacctgagac-ttgaggaggagcatactcccagttcctaagccaatagcatcagactaacccaagtgggtt 15047  T

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Target: scaffold0291 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 2468 - 2546
Alignment:
Q  11 gagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||||||||||||| ||||| || ||| ||  ||| |||| | ||||||||||| ||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

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Target: scaffold0299 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 11607 - 11534
Alignment:
Q  10 agagaattgaacctaagaccttgaggaggagcatactccaaggtcccaagtcaacaccaacagaccaacccaag 83  Q
    ||||||| |||||| |||||| ||||||||||| ||||| || ||||||| ||| |||| ||| ||| ||||||    
T  11607 agagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

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