View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8253_high_10 (Length: 389)

Name: NF8253_high_10
Description: NF8253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8253_high_10
NF8253_high_10
[»] chr7 (83 HSPs)
chr7 (1-279)||(41702815-41703092)
chr7 (281-389)||(43266266-43266374)
chr7 (284-389)||(25628481-25628586)
chr7 (281-389)||(32934666-32934774)
chr7 (281-389)||(43266584-43266692)
chr7 (284-389)||(32068099-32068204)
chr7 (284-389)||(42618229-42618334)
chr7 (281-389)||(23058747-23058855)
chr7 (281-389)||(42617911-42618019)
chr7 (283-389)||(25628796-25628902)
chr7 (284-389)||(28890582-28890687)
chr7 (281-389)||(22081877-22081985)
chr7 (281-389)||(25453128-25453236)
chr7 (281-389)||(27138259-27138367)
chr7 (281-389)||(32068414-32068522)
chr7 (281-389)||(33828292-33828400)
chr7 (284-389)||(32934351-32934456)
chr7 (284-388)||(10600268-10600372)
chr7 (281-389)||(22081560-22081667)
chr7 (284-389)||(39274873-39274978)
chr7 (300-389)||(28469328-28469417)
chr7 (284-389)||(46204424-46204529)
chr7 (281-389)||(23058429-23058537)
chr7 (300-389)||(10935813-10935902)
chr7 (284-389)||(25453446-25453551)
chr7 (300-388)||(6571032-6571120)
chr7 (281-389)||(32680884-32680992)
chr7 (300-389)||(6253490-6253579)
chr7 (300-389)||(17102039-17102128)
chr7 (300-389)||(22871597-22871686)
chr7 (300-389)||(32299025-32299114)
chr7 (300-389)||(42731438-42731527)
chr7 (281-357)||(10600026-10600102)
chr7 (300-388)||(19204508-19204596)
chr7 (303-389)||(23181314-23181400)
chr7 (300-389)||(45010924-45011013)
chr7 (290-385)||(13050104-13050200)
chr7 (293-389)||(18855974-18856070)
chr7 (300-387)||(16803967-16804054)
chr7 (281-388)||(32680595-32680702)
chr7 (300-389)||(5457227-5457316)
chr7 (300-389)||(27991758-27991847)
chr7 (300-389)||(42362469-42362558)
chr7 (284-389)||(46205627-46205732)
chr7 (290-389)||(32687406-32687505)
chr7 (307-389)||(2640498-2640580)
chr7 (290-388)||(18087659-18087757)
chr7 (53-180)||(46691849-46691978)
chr7 (335-389)||(48789123-48789177)
chr7 (300-389)||(27396915-27397004)
chr7 (300-389)||(40379788-40379877)
chr7 (281-389)||(30948449-30948557)
chr7 (290-385)||(13044681-13044776)
chr7 (275-389)||(29144302-29144416)
chr7 (300-389)||(24388838-24388927)
chr7 (300-389)||(37656871-37656960)
chr7 (281-389)||(34928939-34929047)
chr7 (281-389)||(39686823-39686931)
chr7 (281-388)||(34928650-34928757)
chr7 (315-389)||(43124472-43124546)
chr7 (335-389)||(45010652-45010706)
chr7 (300-389)||(42019917-42020006)
chr7 (304-388)||(20426651-20426735)
chr7 (337-389)||(32053463-32053515)
chr7 (290-389)||(18086298-18086397)
chr7 (290-389)||(22828138-22828237)
chr7 (290-389)||(32688538-32688637)
chr7 (56-111)||(49035928-49035983)
chr7 (300-389)||(17886810-17886899)
chr7 (300-388)||(17102310-17102398)
chr7 (300-388)||(18670184-18670272)
chr7 (288-388)||(30948167-30948267)
chr7 (56-111)||(33320710-33320765)
chr7 (302-389)||(33808344-33808431)
chr7 (301-388)||(39686554-39686641)
chr7 (302-388)||(13386068-13386154)
chr7 (290-363)||(23608817-23608890)
chr7 (300-389)||(40380004-40380093)
chr7 (123-180)||(42598057-42598114)
chr7 (337-389)||(3914194-3914246)
chr7 (304-388)||(7354885-7354969)
chr7 (290-362)||(10092215-10092287)
chr7 (300-388)||(27992029-27992117)
[»] chr4 (113 HSPs)
chr4 (281-389)||(54858878-54858986)
chr4 (281-389)||(3032582-3032690)
chr4 (283-389)||(45463075-45463181)
chr4 (284-389)||(11523952-11524057)
chr4 (281-389)||(10408207-10408315)
chr4 (281-389)||(27069228-27069336)
chr4 (281-389)||(50504143-50504251)
chr4 (281-389)||(54858560-54858668)
chr4 (284-389)||(39701227-39701332)
chr4 (281-389)||(27068910-27069018)
chr4 (281-389)||(52573228-52573336)
chr4 (281-387)||(52573548-52573654)
chr4 (284-389)||(5818093-5818198)
chr4 (281-389)||(10407889-10407997)
chr4 (281-389)||(27149314-27149421)
chr4 (281-387)||(50503825-50503931)
chr4 (281-389)||(16605602-16605710)
chr4 (281-389)||(22987169-22987277)
chr4 (284-388)||(45463392-45463496)
chr4 (281-389)||(51859724-51859832)
chr4 (284-389)||(22717942-22718047)
chr4 (281-389)||(27891584-27891692)
chr4 (284-389)||(39667094-39667199)
chr4 (300-389)||(7451853-7451942)
chr4 (292-389)||(22718257-22718354)
chr4 (292-389)||(22923149-22923246)
chr4 (292-389)||(22927802-22927899)
chr4 (292-389)||(22984081-22984178)
chr4 (292-389)||(22986862-22986959)
chr4 (292-389)||(22997669-22997766)
chr4 (281-389)||(34765700-34765808)
chr4 (301-389)||(37248256-37248344)
chr4 (300-389)||(23613328-23613417)
chr4 (300-389)||(24711130-24711219)
chr4 (284-389)||(39700912-39701017)
chr4 (281-388)||(9400519-9400626)
chr4 (303-389)||(52909275-52909361)
chr4 (300-389)||(13058056-13058145)
chr4 (300-389)||(14801755-14801844)
chr4 (300-389)||(18831368-18831457)
chr4 (283-389)||(39666772-39666884)
chr4 (300-389)||(44967358-44967447)
chr4 (300-389)||(50418957-50419046)
chr4 (304-389)||(55867434-55867519)
chr4 (300-388)||(5368966-5369054)
chr4 (281-389)||(27934532-27934640)
chr4 (281-389)||(35508560-35508668)
chr4 (281-388)||(4982726-4982833)
chr4 (283-389)||(9400808-9400914)
chr4 (307-389)||(54087015-54087097)
chr4 (290-387)||(32063658-32063755)
chr4 (300-389)||(39539238-39539327)
chr4 (300-389)||(49879496-49879585)
chr4 (304-385)||(50750910-50750991)
chr4 (300-389)||(51692572-51692661)
chr4 (281-389)||(4983015-4983123)
chr4 (288-388)||(6236838-6236937)
chr4 (290-389)||(30641529-30641626)
chr4 (281-385)||(50751822-50751925)
chr4 (290-389)||(11446279-11446378)
chr4 (281-388)||(42738031-42738138)
chr4 (319-389)||(36009133-36009203)
chr4 (307-389)||(43155816-43155898)
chr4 (300-389)||(15507993-15508081)
chr4 (300-389)||(35028318-35028407)
chr4 (300-389)||(53701831-53701920)
chr4 (288-388)||(6237141-6237241)
chr4 (281-389)||(11448049-11448157)
chr4 (281-357)||(22567107-22567183)
chr4 (281-389)||(42738320-42738428)
chr4 (290-389)||(30642466-30642565)
chr4 (284-389)||(33247562-33247667)
chr4 (305-389)||(8438305-8438388)
chr4 (288-388)||(9144773-9144873)
chr4 (281-389)||(9145055-9145163)
chr4 (300-384)||(24411377-24411461)
chr4 (281-389)||(32950142-32950250)
chr4 (300-384)||(33247293-33247377)
chr4 (281-389)||(34837363-34837471)
chr4 (280-388)||(38012460-38012568)
chr4 (281-388)||(34837074-34837181)
chr4 (281-388)||(51203609-51203716)
chr4 (290-388)||(10203630-10203728)
chr4 (307-389)||(16005864-16005946)
chr4 (300-389)||(17356242-17356331)
chr4 (300-389)||(24711400-24711489)
chr4 (43-109)||(32183268-32183336)
chr4 (300-389)||(50418687-50418776)
chr4 (289-357)||(27934839-27934907)
chr4 (305-389)||(37976473-37976557)
chr4 (281-389)||(38012170-38012278)
chr4 (345-389)||(51859471-51859515)
chr4 (281-388)||(32950432-32950539)
chr4 (335-389)||(9731530-9731584)
chr4 (300-389)||(10781804-10781893)
chr4 (56-113)||(16572075-16572131)
chr4 (290-383)||(29321231-29321324)
chr4 (290-387)||(40316985-40317082)
chr4 (290-387)||(40327059-40327156)
chr4 (300-389)||(53129826-53129915)
chr4 (281-389)||(1179120-1179228)
chr4 (281-389)||(22566799-22566907)
chr4 (290-389)||(32062598-32062697)
chr4 (290-389)||(41582456-41582555)
chr4 (53-100)||(42390857-42390904)
chr4 (300-389)||(10780732-10780821)
chr4 (300-389)||(10974341-10974430)
chr4 (300-389)||(24349693-24349782)
chr4 (300-389)||(49879226-49879315)
chr4 (300-389)||(51692839-51692928)
chr4 (300-388)||(7452124-7452212)
chr4 (124-180)||(15186985-15187041)
chr4 (281-389)||(54435417-54435525)
[»] chr3 (86 HSPs)
chr3 (284-389)||(32306742-32306847)
chr3 (284-389)||(33156314-33156419)
chr3 (281-389)||(3469200-3469308)
chr3 (281-389)||(13948780-13948888)
chr3 (285-389)||(29118856-29118960)
chr3 (281-389)||(37778591-37778699)
chr3 (275-389)||(52032132-52032246)
chr3 (283-388)||(29686259-29686364)
chr3 (281-389)||(32306424-32306532)
chr3 (281-389)||(40788738-40788846)
chr3 (281-389)||(52032457-52032565)
chr3 (281-388)||(33506269-33506376)
chr3 (281-387)||(3469520-3469626)
chr3 (284-389)||(3596112-3596217)
chr3 (284-389)||(41421975-41422080)
chr3 (281-389)||(47551493-47551601)
chr3 (283-389)||(11910701-11910807)
chr3 (283-389)||(29685943-29686049)
chr3 (281-389)||(10294567-10294675)
chr3 (299-389)||(35643869-35643959)
chr3 (281-389)||(10294877-10294985)
chr3 (300-389)||(2796198-2796287)
chr3 (281-389)||(42855625-42855733)
chr3 (284-389)||(43998148-43998253)
chr3 (276-389)||(48322666-48322779)
chr3 (283-371)||(29118529-29118617)
chr3 (281-389)||(36314587-36314695)
chr3 (281-388)||(36314298-36314405)
chr3 (300-389)||(9294278-9294367)
chr3 (284-389)||(10770780-10770885)
chr3 (317-389)||(10307693-10307765)
chr3 (284-388)||(10770493-10770597)
chr3 (290-389)||(9368621-9368720)
chr3 (290-389)||(21186015-21186114)
chr3 (303-389)||(33689699-33689785)
chr3 (300-389)||(19741212-19741301)
chr3 (300-389)||(23458299-23458388)
chr3 (284-389)||(40788423-40788528)
chr3 (300-389)||(42342810-42342899)
chr3 (281-388)||(48322377-48322484)
chr3 (38-180)||(31525351-31525491)
chr3 (300-389)||(40506107-40506197)
chr3 (40-114)||(53349391-53349465)
chr3 (304-385)||(4323526-4323607)
chr3 (303-388)||(46474837-46474922)
chr3 (300-389)||(51994206-51994295)
chr3 (281-385)||(4322592-4322695)
chr3 (300-388)||(40033777-40033865)
chr3 (290-389)||(1079541-1079640)
chr3 (290-389)||(6956257-6956356)
chr3 (281-331)||(13949071-13949121)
chr3 (300-389)||(40758166-40758252)
chr3 (319-389)||(43384321-43384391)
chr3 (290-388)||(47856396-47856494)
chr3 (303-389)||(53756766-53756852)
chr3 (319-389)||(55052568-55052638)
chr3 (288-389)||(54466430-54466531)
chr3 (281-389)||(8041616-8041724)
chr3 (283-331)||(33506180-33506228)
chr3 (56-180)||(9358753-9358876)
chr3 (281-383)||(33154877-33154979)
chr3 (40-110)||(55166895-55166965)
chr3 (56-184)||(28934736-28934861)
chr3 (56-109)||(47820904-47820957)
chr3 (41-109)||(28956935-28957005)
chr3 (53-180)||(43073050-43073175)
chr3 (290-388)||(23276304-23276402)
chr3 (299-389)||(43608802-43608892)
chr3 (290-355)||(43607789-43607854)
chr3 (288-388)||(54466713-54466813)
chr3 (290-389)||(1078546-1078644)
chr3 (294-349)||(3596432-3596486)
chr3 (290-389)||(32431512-32431611)
chr3 (290-389)||(47857565-47857664)
chr3 (281-388)||(47921466-47921573)
chr3 (53-111)||(8431489-8431546)
chr3 (53-181)||(10454282-10454413)
chr3 (300-389)||(40758430-40758519)
chr3 (288-388)||(8041906-8042006)
chr3 (281-389)||(25107213-25107321)
chr3 (290-356)||(26479079-26479145)
chr3 (304-389)||(41558202-41558287)
chr3 (305-389)||(21783815-21783899)
chr3 (353-389)||(26463918-26463954)
chr3 (300-352)||(34142575-34142627)
chr3 (300-356)||(35712063-35712119)
[»] scaffold0328 (2 HSPs)
scaffold0328 (281-389)||(11458-11566)
scaffold0328 (284-389)||(11143-11248)
[»] chr1 (99 HSPs)
chr1 (281-389)||(40714444-40714552)
chr1 (281-389)||(49955665-49955773)
chr1 (281-389)||(40714761-40714869)
chr1 (281-389)||(17188954-17189062)
chr1 (281-389)||(20760823-20760931)
chr1 (281-389)||(31058375-31058483)
chr1 (281-388)||(49955347-49955454)
chr1 (275-389)||(28325122-28325235)
chr1 (280-385)||(17189173-17189278)
chr1 (280-389)||(30326495-30326604)
chr1 (281-389)||(12905977-12906085)
chr1 (281-389)||(31050950-31051058)
chr1 (281-389)||(37929418-37929526)
chr1 (281-389)||(45749842-45749950)
chr1 (281-389)||(45750160-45750268)
chr1 (284-389)||(35040932-35041037)
chr1 (281-389)||(8898517-8898625)
chr1 (281-389)||(8898835-8898943)
chr1 (283-389)||(44523456-44523562)
chr1 (281-389)||(28324805-28324912)
chr1 (300-389)||(6367581-6367670)
chr1 (289-389)||(14878979-14879079)
chr1 (281-389)||(32558425-32558533)
chr1 (281-388)||(28011658-28011765)
chr1 (38-180)||(26990589-26990729)
chr1 (300-389)||(24009861-24009950)
chr1 (300-389)||(25647903-25647992)
chr1 (300-389)||(34464468-34464557)
chr1 (281-388)||(24905167-24905274)
chr1 (302-385)||(26024444-26024527)
chr1 (38-113)||(47028919-47028994)
chr1 (302-388)||(41098754-41098840)
chr1 (307-389)||(46163056-46163138)
chr1 (284-389)||(7371293-7371398)
chr1 (300-389)||(7820973-7821062)
chr1 (300-389)||(13914387-13914476)
chr1 (300-389)||(17662170-17662259)
chr1 (300-389)||(19515838-19515927)
chr1 (300-389)||(23209647-23209736)
chr1 (284-389)||(35038458-35038563)
chr1 (300-389)||(36694568-36694657)
chr1 (300-389)||(36710669-36710758)
chr1 (300-389)||(37578512-37578601)
chr1 (300-388)||(34464770-34464858)
chr1 (281-388)||(19017950-19018057)
chr1 (303-389)||(1841481-1841567)
chr1 (38-180)||(12172942-12173082)
chr1 (303-389)||(40210690-40210776)
chr1 (281-342)||(25885358-25885419)
chr1 (300-389)||(40772526-40772615)
chr1 (300-389)||(42248492-42248581)
chr1 (300-388)||(35152362-35152450)
chr1 (281-388)||(5734010-5734116)
chr1 (290-389)||(32132313-32132412)
chr1 (335-389)||(1103515-1103569)
chr1 (303-389)||(4960562-4960648)
chr1 (300-389)||(32917279-32917368)
chr1 (275-388)||(52134358-52134471)
chr1 (281-347)||(7371529-7371595)
chr1 (283-389)||(33442883-33442989)
chr1 (300-386)||(47999415-47999501)
chr1 (300-389)||(30711346-30711435)
chr1 (56-109)||(43268679-43268732)
chr1 (290-389)||(10303932-10304031)
chr1 (290-389)||(10304175-10304274)
chr1 (290-389)||(17691228-17691327)
chr1 (281-388)||(33442594-33442701)
chr1 (319-389)||(183511-183581)
chr1 (300-389)||(13914087-13914176)
chr1 (300-389)||(17692505-17692594)
chr1 (288-389)||(31514606-31514707)
chr1 (300-389)||(34849030-34849119)
chr1 (300-389)||(34850385-34850474)
chr1 (300-356)||(42533043-42533099)
chr1 (334-389)||(43758875-43758930)
chr1 (41-87)||(42442105-42442151)
chr1 (281-383)||(44522147-44522249)
chr1 (281-359)||(52134068-52134146)
chr1 (56-173)||(8462980-8463097)
chr1 (284-389)||(24905456-24905560)
chr1 (308-389)||(28011390-28011471)
chr1 (304-389)||(31197088-31197168)
chr1 (300-389)||(49723046-49723135)
chr1 (281-325)||(25884701-25884745)
chr1 (288-388)||(31514325-31514425)
chr1 (53-113)||(31833898-31833957)
chr1 (288-351)||(4716475-4716538)
chr1 (300-355)||(35473650-35473705)
chr1 (290-388)||(9443581-9443679)
chr1 (303-385)||(13300228-13300310)
chr1 (279-389)||(26024712-26024822)
chr1 (319-389)||(32133243-32133313)
chr1 (300-350)||(40435364-40435414)
chr1 (300-389)||(30711647-30711736)
chr1 (300-389)||(37578211-37578300)
chr1 (56-113)||(41955959-41956016)
chr1 (304-389)||(46899920-46900005)
chr1 (300-356)||(35152683-35152739)
chr1 (45-109)||(46757301-46757365)
[»] scaffold0388 (2 HSPs)
scaffold0388 (284-389)||(12557-12662)
scaffold0388 (284-389)||(12249-12348)
[»] chr8 (88 HSPs)
chr8 (281-389)||(15229931-15230039)
chr8 (281-389)||(234058-234166)
chr8 (281-389)||(710469-710577)
chr8 (281-389)||(747681-747789)
chr8 (281-389)||(871576-871684)
chr8 (281-389)||(7983428-7983536)
chr8 (281-389)||(44664508-44664616)
chr8 (283-389)||(44664826-44664932)
chr8 (284-389)||(10445653-10445758)
chr8 (284-389)||(25124566-25124671)
chr8 (281-389)||(15230249-15230357)
chr8 (281-389)||(35634417-35634525)
chr8 (278-389)||(25124881-25124992)
chr8 (284-389)||(6471693-6471798)
chr8 (284-389)||(37542227-37542332)
chr8 (283-387)||(8998009-8998113)
chr8 (284-389)||(42945432-42945537)
chr8 (300-389)||(40318284-40318373)
chr8 (284-389)||(41353577-41353682)
chr8 (281-389)||(41353891-41353999)
chr8 (281-388)||(23505052-23505159)
chr8 (283-389)||(21432695-21432801)
chr8 (42-180)||(5200486-5200623)
chr8 (300-389)||(8316908-8316997)
chr8 (300-389)||(16388846-16388935)
chr8 (300-389)||(23663834-23663923)
chr8 (281-389)||(11674695-11674803)
chr8 (284-388)||(36325524-36325628)
chr8 (290-389)||(2535870-2535969)
chr8 (284-371)||(8997859-8997946)
chr8 (281-388)||(11674984-11675091)
chr8 (300-389)||(12273173-12273262)
chr8 (300-389)||(23698564-23698653)
chr8 (300-389)||(39071695-39071784)
chr8 (284-364)||(38003749-38003829)
chr8 (281-388)||(23507746-23507853)
chr8 (300-389)||(4994977-4995065)
chr8 (300-389)||(13186079-13186168)
chr8 (300-389)||(36928495-36928584)
chr8 (284-389)||(37542543-37542648)
chr8 (281-389)||(36325234-36325342)
chr8 (300-387)||(22915680-22915767)
chr8 (284-389)||(27500092-27500197)
chr8 (300-389)||(31608833-31608922)
chr8 (300-389)||(38955722-38955811)
chr8 (41-180)||(24200626-24200762)
chr8 (314-389)||(39474579-39474654)
chr8 (290-364)||(10749853-10749927)
chr8 (300-389)||(4405980-4406069)
chr8 (319-388)||(6472009-6472078)
chr8 (281-389)||(38845588-38845696)
chr8 (39-181)||(40930833-40930972)
chr8 (281-327)||(6472395-6472441)
chr8 (300-389)||(1425342-1425430)
chr8 (300-389)||(34061648-34061737)
chr8 (281-389)||(2266492-2266600)
chr8 (281-389)||(8746324-8746432)
chr8 (301-389)||(35449898-35449986)
chr8 (325-389)||(42945158-42945222)
chr8 (281-388)||(2266782-2266889)
chr8 (38-111)||(10124847-10124922)
chr8 (281-388)||(40775650-40775757)
chr8 (290-389)||(43181472-43181571)
chr8 (324-382)||(21433018-21433076)
chr8 (293-351)||(27500434-27500492)
chr8 (304-389)||(2534718-2534803)
chr8 (300-389)||(8316672-8316761)
chr8 (304-389)||(35756606-35756690)
chr8 (300-385)||(42803542-42803627)
chr8 (288-388)||(3041463-3041563)
chr8 (281-389)||(3041745-3041853)
chr8 (337-389)||(36186387-36186439)
chr8 (313-389)||(38003487-38003563)
chr8 (281-389)||(40775939-40776047)
chr8 (288-388)||(44406864-44406964)
chr8 (281-389)||(44407146-44407254)
chr8 (274-385)||(34060482-34060593)
chr8 (334-389)||(38862671-38862726)
chr8 (300-385)||(30459390-30459475)
chr8 (56-109)||(30836212-30836265)
chr8 (303-383)||(9337048-9337128)
chr8 (288-388)||(38845306-38845406)
chr8 (41-111)||(25829338-25829408)
chr8 (41-179)||(38086419-38086560)
chr8 (300-389)||(12272937-12273026)
chr8 (300-389)||(13186379-13186468)
chr8 (300-389)||(38862883-38862972)
chr8 (281-389)||(34685578-34685685)
[»] chr2 (66 HSPs)
chr2 (281-389)||(8710786-8710894)
chr2 (281-389)||(28226062-28226170)
chr2 (281-389)||(15604339-15604447)
chr2 (284-389)||(15604657-15604762)
chr2 (284-389)||(8342190-8342295)
chr2 (282-389)||(41588376-41588483)
chr2 (282-389)||(11830365-11830472)
chr2 (284-389)||(8342497-8342602)
chr2 (281-385)||(6573543-6573647)
chr2 (281-389)||(41587235-41587342)
chr2 (284-385)||(6573050-6573150)
chr2 (300-389)||(39498329-39498418)
chr2 (300-389)||(44714081-44714170)
chr2 (281-385)||(25892394-25892498)
chr2 (290-389)||(202676-202775)
chr2 (300-389)||(15848107-15848196)
chr2 (290-389)||(6589679-6589778)
chr2 (302-389)||(16099076-16099163)
chr2 (300-389)||(2318178-2318266)
chr2 (300-389)||(10712742-10712831)
chr2 (300-389)||(11163343-11163432)
chr2 (302-389)||(22051313-22051400)
chr2 (275-389)||(36382155-36382269)
chr2 (303-389)||(36479740-36479826)
chr2 (300-388)||(45556131-45556219)
chr2 (292-387)||(3652222-3652317)
chr2 (290-389)||(28230059-28230158)
chr2 (290-389)||(39936567-39936665)
chr2 (290-388)||(28228679-28228777)
chr2 (300-389)||(6657897-6657986)
chr2 (281-389)||(14900772-14900878)
chr2 (281-389)||(33739703-33739811)
chr2 (281-388)||(1695740-1695847)
chr2 (315-389)||(3653400-3653473)
chr2 (319-389)||(36755131-36755201)
chr2 (300-389)||(3556329-3556418)
chr2 (300-389)||(6588702-6588791)
chr2 (336-389)||(37895667-37895720)
chr2 (300-389)||(39423534-39423623)
chr2 (276-388)||(13995668-13995780)
chr2 (281-389)||(13995962-13996070)
chr2 (281-357)||(14900496-14900572)
chr2 (281-389)||(33062339-33062447)
chr2 (300-384)||(34447832-34447916)
chr2 (281-388)||(33062050-33062157)
chr2 (290-385)||(43742000-43742095)
chr2 (300-389)||(3555269-3555358)
chr2 (304-389)||(25231168-25231253)
chr2 (53-113)||(14732410-14732470)
chr2 (276-388)||(33739993-33740105)
chr2 (281-389)||(41248848-41248956)
chr2 (290-388)||(17266407-17266505)
chr2 (290-355)||(199030-199095)
chr2 (288-389)||(1696029-1696130)
chr2 (312-385)||(6577601-6577674)
chr2 (300-389)||(30729640-30729729)
chr2 (337-385)||(25893542-25893590)
chr2 (288-388)||(41248566-41248666)
chr2 (53-184)||(41419620-41419752)
chr2 (290-389)||(39935465-39935563)
chr2 (300-389)||(13692540-13692629)
chr2 (300-389)||(36755408-36755497)
chr2 (300-389)||(44713814-44713903)
chr2 (300-388)||(6658168-6658256)
chr2 (53-113)||(38908672-38908731)
chr2 (300-388)||(39498600-39498688)
[»] chr6 (57 HSPs)
chr6 (282-389)||(7905244-7905351)
chr6 (284-389)||(7160807-7160912)
chr6 (284-389)||(22502777-22502882)
chr6 (281-389)||(6517503-6517610)
chr6 (284-389)||(21836035-21836139)
chr6 (284-389)||(31407196-31407301)
chr6 (281-389)||(21836348-21836456)
chr6 (281-389)||(22503092-22503200)
chr6 (281-389)||(31406878-31406986)
chr6 (281-389)||(7161122-7161230)
chr6 (281-389)||(32593490-32593598)
chr6 (284-389)||(15913551-15913656)
chr6 (300-389)||(30803880-30803969)
chr6 (284-389)||(7905561-7905666)
chr6 (281-382)||(10781147-10781248)
chr6 (300-389)||(30337468-30337557)
chr6 (281-389)||(15913866-15913974)
chr6 (282-389)||(14196904-14197011)
chr6 (284-389)||(12065223-12065328)
chr6 (300-389)||(33517553-33517642)
chr6 (300-388)||(21628034-21628122)
chr6 (284-388)||(25485956-25486060)
chr6 (281-388)||(14196615-14196722)
chr6 (300-389)||(3059276-3059365)
chr6 (304-389)||(8089466-8089551)
chr6 (315-388)||(10781477-10781550)
chr6 (300-389)||(12080655-12080744)
chr6 (302-389)||(30725781-30725867)
chr6 (304-389)||(26463202-26463287)
chr6 (300-388)||(17734484-17734572)
chr6 (281-389)||(28000674-28000782)
chr6 (281-388)||(362870-362977)
chr6 (290-388)||(28498346-28498444)
chr6 (276-389)||(363119-363232)
chr6 (309-389)||(11392866-11392946)
chr6 (293-389)||(24210543-24210639)
chr6 (281-389)||(25486215-25486323)
chr6 (41-109)||(15859084-15859154)
chr6 (281-388)||(22372978-22373085)
chr6 (300-389)||(30337738-30337827)
chr6 (300-388)||(8090248-8090336)
chr6 (290-389)||(141060-141159)
chr6 (290-389)||(149081-149180)
chr6 (281-388)||(22367425-22367532)
chr6 (290-388)||(29810757-29810855)
chr6 (335-389)||(33647017-33647071)
chr6 (300-388)||(15115358-15115446)
chr6 (290-385)||(15116556-15116651)
chr6 (274-388)||(33647272-33647386)
chr6 (300-389)||(681048-681137)
chr6 (300-389)||(3059576-3059665)
chr6 (308-361)||(3176376-3176429)
chr6 (300-389)||(33517854-33517943)
chr6 (290-350)||(139817-139875)
chr6 (290-350)||(147838-147896)
chr6 (124-180)||(6575797-6575853)
chr6 (288-328)||(28000392-28000432)
[»] chr5 (76 HSPs)
chr5 (281-388)||(17544367-17544474)
chr5 (281-389)||(8875449-8875557)
chr5 (281-389)||(33871339-33871447)
chr5 (281-389)||(33871656-33871764)
chr5 (281-389)||(20152781-20152889)
chr5 (281-389)||(20153236-20153341)
chr5 (303-389)||(22298564-22298650)
chr5 (281-389)||(21287975-21288083)
chr5 (300-389)||(3529162-3529251)
chr5 (300-389)||(38475319-38475408)
chr5 (300-389)||(39453319-39453408)
chr5 (274-389)||(5993882-5993997)
chr5 (281-382)||(3656743-3656844)
chr5 (300-389)||(5024338-5024427)
chr5 (287-356)||(8875618-8875687)
chr5 (300-389)||(11761768-11761857)
chr5 (300-389)||(16082996-16083085)
chr5 (300-389)||(24547445-24547534)
chr5 (300-389)||(35512167-35512256)
chr5 (281-389)||(6758154-6758262)
chr5 (300-388)||(16157176-16157264)
chr5 (300-388)||(20814456-20814544)
chr5 (302-389)||(186440-186527)
chr5 (290-389)||(24141461-24141560)
chr5 (295-389)||(13962878-13962972)
chr5 (303-389)||(38442090-38442176)
chr5 (303-388)||(13362549-13362634)
chr5 (300-389)||(17202418-17202507)
chr5 (300-389)||(19892628-19892717)
chr5 (300-389)||(27587167-27587256)
chr5 (300-388)||(20840552-20840640)
chr5 (300-389)||(28771158-28771247)
chr5 (305-389)||(35920504-35920588)
chr5 (281-389)||(41930516-41930624)
chr5 (284-388)||(41930806-41930910)
chr5 (310-388)||(17544077-17544155)
chr5 (300-389)||(18247105-18247192)
chr5 (300-389)||(6150473-6150562)
chr5 (300-389)||(14194743-14194831)
chr5 (300-389)||(29646682-29646770)
chr5 (300-389)||(32242261-32242350)
chr5 (290-383)||(40148907-40149000)
chr5 (290-383)||(40150140-40150233)
chr5 (281-389)||(31482691-31482799)
chr5 (274-389)||(1505960-1506075)
chr5 (300-389)||(18670221-18670307)
chr5 (299-389)||(5256332-5256421)
chr5 (299-388)||(6757883-6757972)
chr5 (336-389)||(11047492-11047545)
chr5 (303-388)||(30005175-30005260)
chr5 (281-388)||(31482402-31482509)
chr5 (335-389)||(21287797-21287851)
chr5 (288-389)||(297303-297404)
chr5 (38-109)||(2292149-2292222)
chr5 (300-389)||(6150740-6150829)
chr5 (276-352)||(297009-297085)
chr5 (288-388)||(1506257-1506357)
chr5 (41-173)||(23172984-23173116)
chr5 (53-108)||(9931877-9931932)
chr5 (300-389)||(21265461-21265551)
chr5 (344-389)||(8322467-8322512)
chr5 (300-389)||(19892327-19892416)
chr5 (300-388)||(11740706-11740794)
chr5 (290-370)||(24204937-24205016)
chr5 (353-389)||(28269708-28269744)
chr5 (302-389)||(16156876-16156963)
chr5 (281-388)||(29646362-29646469)
chr5 (319-389)||(35920266-35920336)
chr5 (300-389)||(8322724-8322813)
chr5 (300-389)||(11741837-11741926)
chr5 (44-113)||(25539813-25539881)
chr5 (300-389)||(39453619-39453708)
chr5 (300-388)||(11762038-11762126)
chr5 (300-388)||(19517928-19518016)
chr5 (300-388)||(27587436-27587524)
chr5 (300-388)||(28770888-28770976)
[»] scaffold0771 (2 HSPs)
scaffold0771 (281-389)||(920-1028)
scaffold0771 (281-331)||(1211-1261)
[»] scaffold0006 (2 HSPs)
scaffold0006 (281-389)||(222107-222215)
scaffold0006 (284-389)||(221794-221898)
[»] scaffold0599 (1 HSPs)
scaffold0599 (283-389)||(2395-2501)
[»] scaffold0042 (1 HSPs)
scaffold0042 (283-389)||(12098-12204)
[»] scaffold0031 (1 HSPs)
scaffold0031 (300-389)||(68984-69073)
[»] scaffold0205 (2 HSPs)
scaffold0205 (281-388)||(21009-21116)
scaffold0205 (281-387)||(21260-21366)
[»] scaffold0007 (1 HSPs)
scaffold0007 (300-389)||(1788-1877)
[»] scaffold0005 (1 HSPs)
scaffold0005 (300-389)||(37883-37972)
[»] scaffold0008 (1 HSPs)
scaffold0008 (290-389)||(239871-239970)
[»] scaffold0020 (1 HSPs)
scaffold0020 (300-389)||(139691-139780)
[»] scaffold0775 (1 HSPs)
scaffold0775 (290-389)||(6298-6397)
[»] scaffold0024 (2 HSPs)
scaffold0024 (281-389)||(141883-141991)
scaffold0024 (288-388)||(141601-141701)
[»] scaffold0128 (1 HSPs)
scaffold0128 (290-389)||(19866-19965)
[»] scaffold0220 (1 HSPs)
scaffold0220 (290-388)||(23240-23338)
[»] scaffold0559 (1 HSPs)
scaffold0559 (281-389)||(1233-1341)
[»] scaffold0075 (2 HSPs)
scaffold0075 (300-362)||(14737-14799)
scaffold0075 (303-388)||(14451-14536)
[»] scaffold0707 (1 HSPs)
scaffold0707 (300-389)||(6399-6488)


Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 41702815 - 41703092
Alignment:
Q  1 catgtggtttgtcatatctatatgcttgcgtcaattctcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccga 100  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41702815 catgtggtttgtcatatgtttatgcctgcgtcaattctcttttgtttagggttggtttttaaggggtttttgttcgagccggtgtttgtgcggcaaccga 41702914  T
Q  101 cttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgggctaattggttgataatagtttgccaattnnnnnnnnnncatgat 200  Q
    ||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| |          ||||||    
T  41702915 cttccccttgtatgttttttttctccacccaaacttattagtgctccttgcacgggctagttggttgataatattttgtcaa-taaaaaaaaaacatgat 41703013  T
Q  201 ttttaggttttcaaaaatacattagcacaatttatgtcaaatatacaaaagaaaattttggtcaatgacattcaaaatt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41703014 ttttaggttttcaaaaatacattagcacaatttatgtcaaatatacaaaagaaaattttggtcaatgacattcaaaatt 41703092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 43266266 - 43266374
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||    
T  43266266 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatt 43266365  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  43266366 taaaatttc 43266374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 25628481 - 25628586
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaa 25628580  T
Q  384 aatttc 389  Q
    ||||||    
T  25628581 aatttc 25628586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 32934774 - 32934666
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||| |||||||||||||||||||    
T  32934774 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatcatt 32934675  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  32934674 taaaatttc 32934666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 43266692 - 43266584
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||| |||||||||||||||    
T  43266692 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcatt 43266593  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  43266592 taaaatttc 43266584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 32068099 - 32068204
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32068198  T
Q  384 aatttc 389  Q
    ||||||    
T  32068199 aatttc 32068204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 42618334 - 42618229
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  42618334 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 42618235  T
Q  384 aatttc 389  Q
    ||||||    
T  42618234 aatttc 42618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 23058855 - 23058747
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||  |||||||||||||||    
T  23058855 ggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatcatt 23058756  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  23058755 taaaatttc 23058747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 42617911 - 42618019
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||| |||||||| |||||||||||| |||||||||||||||    
T  42617911 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatcatt 42618010  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  42618011 taaaatttc 42618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 25628902 - 25628796
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 25628803  T
Q  383 aaatttc 389  Q
    |||||||    
T  25628802 aaatttc 25628796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 28890582 - 28890687
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  28890582 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 28890681  T
Q  384 aatttc 389  Q
    ||||||    
T  28890682 aatttc 28890687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 22081985 - 22081877
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||||   |||||||| ||||||||||||||||||||| |||||||||||||||    
T  22081985 ggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 22081886  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  22081885 taaaatttc 22081877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 25453128 - 25453236
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||| |||||||| |||||||||||| |||| ||||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatt 25453227  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  25453228 taaaatttc 25453236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 27138367 - 27138259
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||    
T  27138367 ggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 27138268  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  27138267 taaaatttc 27138259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 32068522 - 32068414
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||  |||||||| |||||||| |||||||||||| |||||||||||||||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatt 32068423  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  32068422 taaaatttc 32068414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 33828400 - 33828292
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||    
T  33828400 ggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 33828301  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  33828300 taaaatttc 33828292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 32934351 - 32934456
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  32934351 ttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 32934450  T
Q  384 aatttc 389  Q
    ||||||    
T  32934451 aatttc 32934456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 10600372 - 10600268
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| ||||||||||||||| ||    
T  10600372 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcattcaa 10600273  T
Q  384 aattt 388  Q
    |||||    
T  10600272 aattt 10600268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 22081560 - 22081667
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  | |||||| |||| |||||||||||||||| |||||||||||||||    
T  22081560 ggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtc-ctctaatcgctaatgctggcaatttacccttgcattgtttaatcatt 22081658  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  22081659 taaaatttc 22081667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 39274873 - 39274978
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||  |||||||| ||||||| | |||||||| || ||||||||||||||||||    
T  39274873 ttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgcattgtttaatcatttaa 39274972  T
Q  384 aatttc 389  Q
    ||||||    
T  39274973 aatttc 39274978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 28469417 - 28469328
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28469417 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 28469328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 46204424 - 46204529
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||| |||| ||||||||| || |||| ||| |||||||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcatttaa 46204523  T
Q  384 aatttc 389  Q
    ||||||    
T  46204524 aatttc 46204529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 23058429 - 23058537
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||||||  ||||||   ||||||||||||| |||| || |||||||||||||||    
T  23058429 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattgcattgtttaatcatt 23058528  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  23058529 taaaatttc 23058537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 10935813 - 10935902
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  10935813 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10935902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 25453551 - 25453446
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||||||||||  || ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  25453551 ttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 25453452  T
Q  384 aatttc 389  Q
     |||||    
T  25453451 catttc 25453446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 6571032 - 6571120
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  6571032 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattt 6571120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 32680992 - 32680884
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| ||| ||||||| | |||||||||||||||| |||| || |  |||||||||    
T  32680992 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 32680893  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  32680892 taaaatttc 32680884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 6253490 - 6253579
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  6253490 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 6253579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 17102039 - 17102128
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  17102039 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 17102128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 22871686 - 22871597
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| |||  |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  22871686 tccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcatttaaaatttc 22871597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 32299114 - 32299025
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  32299114 tccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattgaaaatttc 32299025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 42731438 - 42731527
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  42731438 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 42731527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 10600026 - 10600102
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 357  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  10600026 ggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaatt 10600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 19204508 - 19204596
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||| ||||||| ||| |||||||||| |||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  19204508 tccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaattt 19204596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 23181400 - 23181314
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| ||| |||||| ||| ||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23181400 ttgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 23181314  T

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Target: chr7; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 45011013 - 45010924
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||  ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  45011013 tccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttc 45010924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 13050200 - 13050104
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttac-attgtttaatcatttaaaa 385  Q
    |||||||| |||||||||||||||||| |||| ||| || |||  |||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  13050200 atgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttacccttgcaattgtttaatcatttaaaa 13050104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 18856070 - 18855974
Alignment:
Q  293 tgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||| |||||||||| |||||||||||||| |||  |||||||||||||| |||||| |||||||| ||  ||||||||||||||||||||    
T  18856070 tgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttc 18855974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 387
Target Start/End: Complemental strand, 16804054 - 16803967
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||  |||||| ||||||||||||| ||||||||||||||||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 32680595 - 32680702
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||   |||||| | |||||||| ||||||| |||| || |  |||||||||    
T  32680595 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcatt 32680694  T
Q  381 taaaattt 388  Q
    ||||||||    
T  32680695 taaaattt 32680702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 5457316 - 5457227
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  5457316 tccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcatttaaaatttc 5457227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 27991758 - 27991847
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||| |||||  ||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  27991758 tccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 27991847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 42362469 - 42362558
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||||||||||| |||| |||||||| |||| |||||||||||||||||||    
T  42362469 tccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatttaaaatttc 42362558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 46205732 - 46205627
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| || ||||||||||    ||||||||| ||| ||   ||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  46205732 ttaatgatgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgtttaatcatttaa 46205633  T
Q  384 aatttc 389  Q
    ||||||    
T  46205632 aatttc 46205627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 32687406 - 32687505
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||||| ||||||| ||||||||||| || |||  ||||||||||||||||||||| || ||||| ||    ||||||||||||||||||    
T  32687406 atgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcatttaaaatttc 32687505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 2640580 - 2640498
Alignment:
Q  307 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||| ||| |||||||||| | |  |||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  2640580 aattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 2640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 388
Target Start/End: Complemental strand, 18087757 - 18087659
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| ||||||||||||||| |||||||||||||| |||| |||||||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatttaaaattt 18087659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 46691978 - 46691849
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatg--nnnnnnnnctccacccaaacttattagtgctccttg 150  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||||          |||||||| | ||| |||||||| ||||    
T  46691978 tggtttttaaggggtttttgttcgagccggtgtttatgtggcaaccgatttccccttgtatgtattttttttctccacccgagcttgttagtgcttcttg 46691879  T
Q  151 cacgggctaattggttgataatagtttgcc 180  Q
    ||||||||  |||||| |||||| ||||||    
T  46691878 cacgggcttgttggttaataatattttgcc 46691849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 48789177 - 48789123
Alignment:
Q  335 tgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  48789177 tgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttc 48789123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 27397004 - 27396915
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| ||||| |||  | ||||||||||||||||||||||||    
T  27397004 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcatttaaaatttc 27396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 40379788 - 40379877
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| |||||||||| ||  |||||||||||||||||||||||    
T  40379788 tccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaatttc 40379877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 30948557 - 30948449
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  30948557 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 30948458  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  30948457 taaaatttc 30948449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 13044681 - 13044776
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||||| | ||||||||||||||||| ||||||||| || |||   ||||||| || ||||| ||||||||| || ||||||||||||||||||||    
T  13044681 atgtgtctcgtccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaatttaccattgcattgtttaatcatttaaaa 13044776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 29144416 - 29144302
Alignment:
Q  275 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgtt-aatcctggcaatttacccttacattgttt 373  Q
    ||||| |||||||  |||| ||| |||| |||||||||| ||| |||||||||| |||| | |||||||| |||||| |||| ||||| || ||||||||    
T  29144416 aaattaggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtca-tataatcgtttaatccttgcaacttacctttgcattgttt 29144318  T
Q  374 aatcatttaaaatttc 389  Q
    ||||||||||||||||    
T  29144317 aatcatttaaaatttc 29144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 24388838 - 24388927
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||||| |||  |||| ||| ||||| |||||||||||||||  |||||||||||| ||||||||||    
T  24388838 tccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcacttaaaatttc 24388927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 37656871 - 37656960
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  || |||||||||| |||  |||||||| ||||||| ||||||||| ||| ||||||||| | ||||||||||||    
T  37656871 tccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttatttatttaaaatttc 37656960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 34929047 - 34928939
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  34929047 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 34928948  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  34928947 taaaatttc 34928939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 39686931 - 39686823
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  39686931 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 39686832  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  39686831 taaaatttc 39686823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 34928650 - 34928757
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  34928650 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 34928749  T
Q  381 taaaattt 388  Q
    ||||||||    
T  34928750 taaaattt 34928757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 43124546 - 43124472
Alignment:
Q  315 gtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||  |||||||| |||||||  |||  ||||||| ||||||||||||||||||||||||    
T  43124546 gtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttc 43124472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 45010652 - 45010706
Alignment:
Q  335 tgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  45010652 tgtaatcgctaatcttggcaatttacgcttgcattgtttaatcatttaaaatttc 45010706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 42020006 - 42019917
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||  |||||||||| ||   | |||||| ||||| ||||||||||| ||| ||||||||||| ||||||||||||    
T  42020006 tccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattatttaaaatttc 42019917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 388
Target Start/End: Complemental strand, 20426735 - 20426651
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||  ||| |||||||||| |||  |||| ||| ||||||||||| |||||||| |||  |||||||||||||||||||    
T  20426735 tgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcatttaaaattt 20426651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 32053515 - 32053463
Alignment:
Q  337 taatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||| | || ||||||||||||||||||||||||    
T  32053515 taatcgttaatcctagcaatttatcattgcattgtttaatcatttaaaatttc 32053463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 18086298 - 18086397
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||||||||||||| ||| |||||||||| |||  ||||| || ||||||| |||| ||| |||| || |  ||||||| ||||||||||    
T  18086298 atgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatcacttaaaatttc 18086397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 22828237 - 22828138
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||  |||||| ||||||| |||||||||||||| |||  |||||||||||||| || ||| |||||| | ||    ||||||||||||||||||    
T  22828237 atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattacccctgcaaaccttaatcatttaaaatttc 22828138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 32688637 - 32688538
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| | ||||||||||||| ||||||||||| || |||  |||||||| |||||||| ||| || ||||| ||    ||||||||||||||||||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttc 32688538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 49035983 - 49035928
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 111  Q
    |||||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||    
T  49035983 tttttaaggggtttttgttcgaaccggtgtttatgtggcaaccgatttccccttgt 49035928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 17886899 - 17886810
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  |||||||||||||  || ||||| ||||||||||| ||||  ||||||| ||    ||||||||||||||||||    
T  17886899 tccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatcatttaaaatttc 17886810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 17102398 - 17102310
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  17102398 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatcatttaaaattt 17102310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 18670272 - 18670184
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||| | |||  |||| ||||||||||| ||||||| ||||  ||  ||||||||| |||||||||    
T  18670272 tccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaagtttaatcacttaaaattt 18670184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 30948167 - 30948267
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  30948167 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 30948266  T
Q  388 t 388  Q
    |    
T  30948267 t 30948267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 33320710 - 33320765
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 111  Q
    |||||||||||  |||||||||||||||||||||  ||||||| | ||||||||||    
T  33320710 tttttaagggggttttgttcgagccggtgtttgtaaggcaaccaatttccccttgt 33320765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 33808344 - 33808431
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||||| ||||| |||||||||| |||  |||| ||| ||||||| |||| |||  ||| |||| |||||||||||||||||||    
T  33808344 cttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcatttaaaatttc 33808431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 388
Target Start/End: Original strand, 39686554 - 39686641
Alignment:
Q  301 ccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||||||||||    
T  39686554 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaattt 39686641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 13386154 - 13386068
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||| ||| |||||||||| |||  | || ||| ||||||| ||||  || |||| || ||||||||||||||||||||    
T  13386154 cttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcatttaaaattt 13386068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 23608817 - 23608890
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccct 363  Q
    |||||||| |||||||||| |||| |||||||||||||| |||  |||| |  |||||||||||| ||| ||||    
T  23608817 atgtgtttagtccttgcaaataggggtcatttaaaaattggtccctgtatttcttaatcctggcattttgccct 23608890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 40380093 - 40380004
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||| |||  |||||| ||||  || |||| || |  ||||||||||||||||||    
T  40380093 tccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 40380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 42598057 - 42598114
Alignment:
Q  123 ctccacccaaacttattagtgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    |||||||||| |||||||||||| |||||||||| |  |||||| |||||| ||||||    
T  42598057 ctccacccaagcttattagtgcttcttgcacgggtttgttggttaataatattttgcc 42598114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 3914194 - 3914246
Alignment:
Q  337 taatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| |||| || |||||||||  || ||||||||||||||||||||||||    
T  3914194 taatcgctaattctagcaatttacatttgcattgtttaatcatttaaaatttc 3914246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 7354885 - 7354969
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||| |||| |||||||||||||| |||  | || ||||||||| ||||| ||| ||| || | | ||||||||||||||||||    
T  7354885 tgcaaataggggtcatttaaaaattggtccctatattcgttaatcgtggcattttgcccctaaactatttaatcatttaaaattt 7354969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 10092287 - 10092215
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 362  Q
    |||||||| |||| || ||||||| ||||| |||||||  |||  | ||||||||||||||||||| ||||||    
T  10092287 atgtgtttcgtccctgtaattaggggtcatgtaaaaatcggtccctataatcgttaatcctggcaaattaccc 10092215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 27992117 - 27992029
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  27992117 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattt 27992029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 113)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 54858986 - 54858878
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  54858986 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 54858887  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  54858886 taaaatttc 54858878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 3032582 - 3032690
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  3032582 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 3032681  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  3032682 taaaatttc 3032690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 45463075 - 45463181
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 45463174  T
Q  383 aaatttc 389  Q
    |||||||    
T  45463175 aaatttc 45463181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 11523952 - 11524057
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaa 11524051  T
Q  384 aatttc 389  Q
    ||||||    
T  11524052 aatttc 11524057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 10408315 - 10408207
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  10408315 ggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10408216  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  10408215 taaaatttc 10408207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 27069336 - 27069228
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||| |||||||||||||||    
T  27069336 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 27069237  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  27069236 taaaatttc 27069228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 50504251 - 50504143
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||    
T  50504251 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcatt 50504152  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  50504151 taaaatttc 50504143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 54858560 - 54858668
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||    
T  54858560 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 54858659  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  54858660 taaaatttc 54858668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 39701332 - 39701227
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| || ||||||||||||||||||    
T  39701332 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatcatttaa 39701233  T
Q  384 aatttc 389  Q
    ||||||    
T  39701232 aatttc 39701227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 27068910 - 27069018
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  27068910 ggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 27069009  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  27069010 taaaatttc 27069018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 52573228 - 52573336
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||   |||||||| ||||||||||||||||| |||||||||||||||||||    
T  52573228 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgtttaatcatt 52573327  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  52573328 taaaatttc 52573336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 52573654 - 52573548
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| || |||||||||||||||    
T  52573654 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatcatt 52573555  T
Q  381 taaaatt 387  Q
    |||||||    
T  52573554 taaaatt 52573548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 5818198 - 5818093
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  5818198 ttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaa 5818099  T
Q  384 aatttc 389  Q
    ||||||    
T  5818098 aatttc 5818093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 10407889 - 10407997
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||  |||||||| |||||||| |||||||||||| |||||||||||||||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 10407988  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  10407989 taaaatttc 10407997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 27149421 - 27149314
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||| | ||||||||||||||||||||| |||||||||||||||    
T  27149421 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa-ttagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 27149323  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  27149322 taaaatttc 27149314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 50503825 - 50503931
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||||||| | ||||||||||||| |||||||||||||||    
T  50503825 ggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatcatt 50503924  T
Q  381 taaaatt 387  Q
    |||||||    
T  50503925 taaaatt 50503931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 16605602 - 16605710
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||| || |||| |||||||||||| ||||| |||||||||    
T  16605602 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcatt 16605701  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  16605702 taaaatttc 16605710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 22987277 - 22987169
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |||||||| |||| ||||||| | |||||||||||||    
T  22987277 ggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatt 22987178  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  22987177 taaaatttc 22987169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 45463496 - 45463392
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||| ||||||| ||||||||||||||||||    
T  45463496 ttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcatttaa 45463397  T
Q  384 aattt 388  Q
    |||||    
T  45463396 aattt 45463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 51859832 - 51859724
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||  |||||||| |||||||||||||||| ||||  ||||||||||||||    
T  51859832 ggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaatcatt 51859733  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  51859732 taaaatttc 51859724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 22717942 - 22718047
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |||||||| |||| ||||||| | ||||||||||||||||    
T  22717942 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaa 22718041  T
Q  384 aatttc 389  Q
    ||||||    
T  22718042 aatttc 22718047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 27891584 - 27891692
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||| | | |||||||||||||||  |||||||| ||||  ||||||||||||||| |||||||||||||||    
T  27891584 ggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcatt 27891683  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  27891684 taaaatttc 27891692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 39667199 - 39667094
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||| ||||| | |||||||||||||| |||  |||||||||||||||||| || |||||||| ||||||||||||||||||    
T  39667199 ttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaa 39667100  T
Q  384 aatttc 389  Q
    ||||||    
T  39667099 aatttc 39667094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 7451853 - 7451942
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  7451853 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 7451942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 22718354 - 22718257
Alignment:
Q  292 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||  ||||||||||||||||||||||| ||  |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  22718354 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 22718257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 22923149 - 22923246
Alignment:
Q  292 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  22923149 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22923246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 22927802 - 22927899
Alignment:
Q  292 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  22927802 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22927899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 22984081 - 22984178
Alignment:
Q  292 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  22984081 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22984178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 22986862 - 22986959
Alignment:
Q  292 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||  ||||||||||||||||||||||| ||  |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  22986862 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 22986959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 22997669 - 22997766
Alignment:
Q  292 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  22997669 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22997766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 34765808 - 34765700
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| ||  ||||||||| |||||||||||||||||| || |||||||||||||||    
T  34765808 ggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatt 34765709  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  34765708 taaaatttc 34765700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 37248256 - 37248344
Alignment:
Q  301 ccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37248256 ccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 37248344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 23613328 - 23613417
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  23613328 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcatttaaaatttc 23613417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 24711130 - 24711219
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  24711130 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcatttaaaatttc 24711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 39700912 - 39701017
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||| |||||||  | ||||||||||||||| |||||||||||| || ||||||||| |||||||| |||| |||||||||||| |||||| ||||||    
T  39700912 ttaatggtgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaatatacccttacattatttaattatttaa 39701011  T
Q  384 aatttc 389  Q
    ||||||    
T  39701012 aatttc 39701017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 9400519 - 9400626
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 9400618  T
Q  381 taaaattt 388  Q
    ||||||||    
T  9400619 taaaattt 9400626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 52909275 - 52909361
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| ||| || ||||||| |||| |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  52909275 ttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 52909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 13058056 - 13058145
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||    
T  13058056 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttc 13058145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 14801755 - 14801844
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| ||||||||||||  |||||||||||||||||||||||    
T  14801755 tccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttc 14801844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 18831368 - 18831457
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||||| ||| |||||||||| |||  |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  18831368 tccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttc 18831457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 39666772 - 39666884
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggc------aatttacccttacattgtttaat 376  Q
    ||||||||||||||| ||| ||| ||||||  |||||||||||||||||||||||||||| ||||||||||      || ||||| || |||||||||||    
T  39666772 cttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcctggcatttaaaaattacctttgcattgtttaat 39666871  T
Q  377 catttaaaatttc 389  Q
    |||||||||||||    
T  39666872 catttaaaatttc 39666884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 44967447 - 44967358
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||  ||| |||||||||| |||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  44967447 tccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 44967358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 50419046 - 50418957
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  50419046 tccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcatttaaaatttc 50418957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 55867519 - 55867434
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||| |||||||||| ||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  55867519 tgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcatttaaaatttc 55867434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 5368966 - 5369054
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||||||  || |||||||||| |||  |||||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  5368966 tccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaattt 5369054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 27934532 - 27934640
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||| ||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||    
T  27934532 ggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 27934631  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  27934632 taaaatttc 27934640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 35508668 - 35508560
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| |||| || ||||||||||| ||| ||||||||||| ||  ||||||||||||| ||  |||||||||||| |||||||||||||||    
T  35508668 ggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatcatt 35508569  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  35508568 taaaatttc 35508560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 4982726 - 4982833
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||| ||| ||||||||||| ||| ||||||| | ||||| |||||||||| |||| || |  |||||||||    
T  4982726 ggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattgttaatcatt 4982825  T
Q  381 taaaattt 388  Q
    ||||||||    
T  4982826 taaaattt 4982833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 9400914 - 9400808
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    |||||||||||| || ||||||||||||||| ||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattta 9400815  T
Q  383 aaatttc 389  Q
    |||||||    
T  9400814 aaatttc 9400808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 54087097 - 54087015
Alignment:
Q  307 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||| ||| |||||||||| |||  |||||||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  54087097 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaatttc 54087015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 387
Target Start/End: Complemental strand, 32063755 - 32063658
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||| |||||||| |||||||||| |||||||||||||| ||   ||||||||||||| ||||||| |||||||| ||  ||||||||||||||||||    
T  32063755 atgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcatttaaaatt 32063658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 39539327 - 39539238
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||||| |||||||||||||||||| || |||| ||| |||| |||| |||||||||||||||||||    
T  39539327 tccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcatttaaaatttc 39539238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 49879585 - 49879496
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||| |  ||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  49879585 tccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 49879496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 385
Target Start/End: Original strand, 50750910 - 50750991
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||||||||||||| |||||||||| |||  |||||||| |||||||||||| ||| |||| ||||||||||||||||||||    
T  50750910 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaa 50750991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 51692572 - 51692661
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||  ||| ||||||||||  || ||||||||| |||||||| |||||||||||| ||||||||||||| ||||||||||    
T  51692572 tccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcacttaaaatttc 51692661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 4983123 - 4983015
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||  ||  |||||| | ||||||| |||||||| |||| || |  |||||||||    
T  4983123 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcatt 4983024  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  4983023 taaaatttc 4983015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 6236838 - 6236937
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||| ||| |||||||||||||| |||||||||||| ||||||  ||||||||||||||| || ||||||||||| || |  ||||||||||||||||    
T  6236838 tgatgtctttagtccttgcaattagacgtcatttaaaatttagtct-tgtaatcgttaatcccgggaatttacccttgcaattgttaatcatttaaaatt 6236936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 30641529 - 30641626
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| | |||||||| |||||||||||||| |||  |||||||||||||||| |||| ||||| |||||  ||||||||||||||||||||    
T  30641529 atgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaattaccattacaaagtttaatcatttaaaatttc 30641626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 50751925 - 50751822
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||   || |||||||||||||| |||||||||| |||  |||||||| |||||||| ||| ||| |||| |||||||||||||||    
T  50751925 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcatt 50751827  T
Q  381 taaaa 385  Q
    |||||    
T  50751826 taaaa 50751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 11446279 - 11446378
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| |||||||||  |||||||||||||| ||  ||| |||||||||||||||||| |||||||| ||  |||||||| |||||||||||    
T  11446279 atgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatcttttaaaatttc 11446378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 42738031 - 42738138
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| |||| |||| || |  |||||| ||    
T  42738031 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccttgcaattgttaatcgtt 42738130  T
Q  381 taaaattt 388  Q
    ||||||||    
T  42738131 taaaattt 42738138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 36009203 - 36009133
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| |||  |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  36009203 tttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcatttaaaatttc 36009133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 43155898 - 43155816
Alignment:
Q  307 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||| ||| |||||||||| |||  ||||||||||||||||||||||||| || | |||| |||||||||||||||||||    
T  43155898 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttc 43155816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 15508081 - 15507993
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| ||||||||| || ||| ||||||||||||||||||||    
T  15508081 tccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatttc 15507993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 35028407 - 35028318
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||  |||||||||| ||| || |  ||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  35028407 tccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttc 35028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 53701831 - 53701920
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| ||||||||||  ||  |||||||  |||||||| ||||||| |||| ||||||||||||||||||||||||    
T  53701831 tccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcatttaaaatttc 53701920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 6237241 - 6237141
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||| ||| || ||| |||||||||||||||||||| ||||||  |||||| | ||||||||  |||||||||||||| |  ||||||||||||||||    
T  6237241 tgatgtctttagttcttacaattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttacccttacaattgttaatcatttaaaatt 6237142  T
Q  388 t 388  Q
    |    
T  6237141 t 6237141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 11448157 - 11448049
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| ||| |||| || ||||||| ||| ||||||||||  ||  |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  11448157 ggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcatt 11448058  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  11448057 taaaatttc 11448049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 22567183 - 22567107
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 357  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| ||||||    
T  22567183 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 22567107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 42738428 - 42738320
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  42738428 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 42738329  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  42738328 taaaatttc 42738320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 30642565 - 30642466
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| |||||||| | ||||||||||||||  ||| |||||||||||||||| |||| |||  ||| ||  ||||||||||||||||||||    
T  30642565 atgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcatttaaaatttc 30642466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 33247667 - 33247562
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || |||||||||||||||  || |||||||||  |||  |||||| | |||||||||||||||| |||| || |  ||||||||||||    
T  33247667 ttaatgatgtgattagtccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 33247568  T
Q  384 aatttc 389  Q
    ||||||    
T  33247567 aatttc 33247562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 8438305 - 8438388
Alignment:
Q  305 gcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||| ||| ||    ||||||||||||||||||    
T  8438305 gcaattaggggtcatttaaaaattggtca-tgtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaaaatttc 8438388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 9144773 - 9144873
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  ||||||||||||||||    
T  9144773 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 9144872  T
Q  388 t 388  Q
    |    
T  9144873 t 9144873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 9145163 - 9145055
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||  |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  9145163 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 9145064  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  9145063 taaaatttc 9145055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 384
Target Start/End: Original strand, 24411377 - 24411461
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaa 384  Q
    |||| ||||||||| ||  |||||||||| |||  |||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  24411377 tcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcatttaaa 24411461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 32950142 - 32950250
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||   ||||| | ||||||||||| |||| || | || |  |||||||||    
T  32950142 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcattttaaccctgcaattgttaatcatt 32950241  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  32950242 taaaatttc 32950250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 384
Target Start/End: Original strand, 33247293 - 33247377
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaa 384  Q
    |||||||||||||| |||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||||||    
T  33247293 tccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaa 33247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 34837471 - 34837363
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  34837471 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 34837372  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  34837371 taaaatttc 34837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 388
Target Start/End: Complemental strand, 38012568 - 38012460
Alignment:
Q  280 gggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcat 379  Q
    ||||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |    
T  38012568 gggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 38012469  T
Q  380 ttaaaattt 388  Q
    |||||||||    
T  38012468 ttaaaattt 38012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 34837074 - 34837181
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  34837074 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 34837173  T
Q  381 taaaattt 388  Q
    ||||||||    
T  34837174 taaaattt 34837181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 51203609 - 51203716
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  51203609 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 51203708  T
Q  381 taaaattt 388  Q
    ||||||||    
T  51203709 taaaattt 51203716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 10203630 - 10203728
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||| |  ||||| | ||||||||||||||||||| ||||||||||||| ||| ||| ||| ||||| |   ||||||||||||||||||    
T  10203630 atgtgtttcgtccctataattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatccttataaaatttaatcatttaaaattt 10203728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 16005864 - 16005946
Alignment:
Q  307 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||| ||| ||||||||||| ||  |||||||| |||| ||||||||||| || |  |||||||||||||||||||||||    
T  16005864 aattaggggtcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaaatttc 16005946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 17356331 - 17356242
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||| | ||| |||||||||| |||  |||| ||| ||||| ||||||||||| ||| |||||||| |||||||||||||||    
T  17356331 tccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcatttaaaatttc 17356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 24711489 - 24711400
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| |||| |||||||||||| ||||  || |||| || |  ||||||||||||||||||    
T  24711489 tccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 24711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 32183268 - 32183336
Alignment:
Q  43 tgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 109  Q
    ||||||||| ||||||||  ||||||| |||||||||||||||||||||  ||||||||| ||||||||    
T  32183268 tgtttaggggtggttttttaaaggggtttttgttcgagccggtgtttgtatggcaaccgatttcccctt 32183336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 50418687 - 50418776
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||| ||||  || |||| || |  ||||||||||||||||||    
T  50418687 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 50418776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 27934907 - 27934839
Alignment:
Q  289 gatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 357  Q
    |||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| ||||||    
T  27934907 gatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 27934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 37976557 - 37976473
Alignment:
Q  305 gcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| ||| ||||||||||  ||  |||||||| |||| ||| ||||||| | || ||||||||||||||||||||||||    
T  37976557 gcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatcatttaaaatttc 37976473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 38012170 - 38012278
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||  | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  38012170 ggcttattgatgtgttcagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 38012269  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  38012270 taaaatttc 38012278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 51859471 - 51859515
Alignment:
Q  345 aatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  51859471 aatcctggcaatttacccttgcattatttaatcatttaaaatttc 51859515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 32950539 - 32950432
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||| | |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  32950539 ggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 32950440  T
Q  381 taaaattt 388  Q
    ||||||||    
T  32950439 taaaattt 32950432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 9731584 - 9731530
Alignment:
Q  335 tgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||||||| ||||||| ||||  |||||||||||||||||||||||    
T  9731584 tgtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttc 9731530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 10781893 - 10781804
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  10781893 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 10781804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 16572075 - 16572131
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 113  Q
    |||| ||||||| ||||||||| ||||||||| |||||||||||| ||||||||||||    
T  16572075 ttttaaaggggt-tttgttcgaaccggtgtttttgcggcaaccgatttccccttgtat 16572131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 383
Target Start/End: Complemental strand, 29321324 - 29321231
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||| ||||||||||||| | |||||||||||||| ||   | ||||||||||| ||||||| ||||| || ||   |||||||||||||    
T  29321324 atgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattaccttttcaaattttaatcatttaa 29321231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 387
Target Start/End: Complemental strand, 40317082 - 40316985
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||| |||| |||| |||||  | ||||||||||| | |  |||||||||||||||||| || |||||||| ||  |||||||| |||||||||    
T  40317082 atgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaatt 40316985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 387
Target Start/End: Complemental strand, 40327156 - 40327059
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||| |||| |||| |||||  | ||||||||||| | |  |||||||||||||||||| || |||||||| ||  |||||||| |||||||||    
T  40327156 atgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaatt 40327059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 53129915 - 53129826
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||| ||| ||||||||||  ||   ||||||| ||||||| ||||||||||||  |||||||| ||| |||||||||||    
T  53129915 tccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcgtttaaaatttc 53129826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 1179228 - 1179120
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| |||| || ||||||||||| ||| |||||||||| ||| ||||| ||| ||||||| ||||  || |||| || |  |||||||||    
T  1179228 ggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 1179129  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  1179128 taaaatttc 1179120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 22566799 - 22566907
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||| | ||| || ||||||| |||||||  || |||||||||| ||   |||||| | |||||||||||||||| |||| || |  |||||||||    
T  22566799 ggcttaataaagtgattagtccttgtaattagggatcgtttaaaaattcgttcctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 22566898  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  22566899 taaaatttc 22566907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 32062598 - 32062697
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| || ||||||| |||||||||||||| |||  ||||| | ||||||||| ||| ||| ||||  |   |||||||||||||||||||    
T  32062598 atgtgtttggtccctgaaattaggggtcatttaaaaattggtccttgtaaacattaatcctgacaaattagccttgtaaaatttaatcatttaaaatttc 32062697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 41582456 - 41582555
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||  ||| |||||| ||| |||||||||||||| |||  | ||||||||||||||||||| || ||| | ||    ||||||||||||||||||    
T  41582456 atgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttc 41582555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 42390904 - 42390857
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccga 100  Q
    ||||||||||||||| |||||| ||||||||||||  |||||||||||    
T  42390904 tggtttttaaggggtttttgtttgagccggtgttttagcggcaaccga 42390857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 10780732 - 10780821
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||| | ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  10780732 tccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 10780821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 10974341 - 10974430
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||| | ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  10974341 tccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 10974430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 24349693 - 24349782
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  24349693 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 24349782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 49879226 - 49879315
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||| | ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  49879226 tccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 49879315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 51692928 - 51692839
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  51692928 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 51692839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 7452212 - 7452124
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  7452212 tccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattt 7452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 15187041 - 15186985
Alignment:
Q  124 tccacccaaacttattagtgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    ||||||||| |||||||||||  ||||||||||||  |||||| |||||| ||||||    
T  15187041 tccacccaagcttattagtgcatcttgcacgggcttgttggttaataatattttgcc 15186985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 54435525 - 54435417
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| ||| || |||||||||||| ||| ||||||||||  || |||||||||| |||||| |||| ||| | || ||||   |||| |||    
T  54435525 ggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttgcaaattagcattgcatttgataattatt 54435426  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  54435425 taaaatttc 54435417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 9e-46; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 32306847 - 32306742
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32306748  T
Q  384 aatttc 389  Q
    ||||||    
T  32306747 aatttc 32306742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 33156419 - 33156314
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33156419 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaa 33156320  T
Q  384 aatttc 389  Q
    ||||||    
T  33156319 aatttc 33156314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 3469200 - 3469308
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||||||||    
T  3469200 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 3469299  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  3469300 taaaatttc 3469308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 13948780 - 13948888
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  13948780 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 13948879  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  13948880 taaaatttc 13948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 285 - 389
Target Start/End: Complemental strand, 29118960 - 29118856
Alignment:
Q  285 taatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaa 384  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || |||||||||||||||||||    
T  29118960 taatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaa 29118861  T
Q  385 atttc 389  Q
    |||||    
T  29118860 atttc 29118856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 37778699 - 37778591
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||| |||||||||||||||    
T  37778699 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 37778600  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  37778599 taaaatttc 37778591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 275 - 389
Target Start/End: Original strand, 52032132 - 52032246
Alignment:
Q  275 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttta 374  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||| ||||||||||||| |||||||||    
T  52032132 aaattaggtttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgttta 52032231  T
Q  375 atcatttaaaatttc 389  Q
    |||||||||||||||    
T  52032232 atcatttaaaatttc 52032246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 29686364 - 29686259
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgcattgtttaatcattta 29686265  T
Q  383 aaattt 388  Q
    ||||||    
T  29686264 aaattt 29686259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 32306424 - 32306532
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||| || |||||||||||| |||||||||||||||    
T  32306424 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatcatt 32306523  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  32306524 taaaatttc 32306532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 40788846 - 40788738
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||| |||||||||||| ||    
T  40788846 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatcttt 40788747  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  40788746 taaaatttc 40788738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 52032565 - 52032457
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||| ||||||| |||||||||||||||    
T  52032565 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatcatt 52032466  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  52032465 taaaatttc 52032457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 33506376 - 33506269
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||||    
T  33506376 ggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttacattgtttaatcatt 33506277  T
Q  381 taaaattt 388  Q
    ||||||||    
T  33506276 taaaattt 33506269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 3469626 - 3469520
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||| |||||||||||||||    
T  3469626 ggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 3469527  T
Q  381 taaaatt 387  Q
    |||||||    
T  3469526 taaaatt 3469520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 3596112 - 3596217
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| || |||| |||||||||||||    
T  3596112 ttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatcatttaa 3596211  T
Q  384 aatttc 389  Q
    ||||||    
T  3596212 aatttc 3596217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 41421975 - 41422080
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||   |||||||||||||| || |||||||||||||||||||||||||||||||    
T  41421975 ttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgtttaatcatttaa 41422074  T
Q  384 aatttc 389  Q
    ||||||    
T  41422075 aatttc 41422080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 47551493 - 47551601
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||  |||||||| |||| |||||||||||||||| |||||||||||||||    
T  47551493 ggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatcatt 47551592  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  47551593 taaaatttc 47551601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 11910701 - 11910807
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| ||  |||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  11910701 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 11910800  T
Q  383 aaatttc 389  Q
    |||||||    
T  11910801 aaatttc 11910807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 29685943 - 29686049
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||| |||| |||||||||||||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcattta 29686042  T
Q  383 aaatttc 389  Q
    |||||||    
T  29686043 aaatttc 29686049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 10294567 - 10294675
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||| || ||||||||||||  ||||||||||||||    
T  10294567 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcatt 10294666  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  10294667 taaaatttc 10294675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 35643869 - 35643959
Alignment:
Q  299 gtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  35643869 gtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttc 35643959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 10294985 - 10294877
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||| || ||| ||||||||||||||   |||||||| ||||||| ||||||||||||| |||||||||||||||    
T  10294985 ggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatcatt 10294886  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  10294885 taaaatttc 10294877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 2796198 - 2796287
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2796198 tccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 2796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 42855733 - 42855625
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||  || |||| |||| ||||||||||    
T  42855733 ggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatt 42855634  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  42855633 taaaatttc 42855625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 43998148 - 43998253
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||| ||||||  || ||| ||||| | ||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  43998148 ttaatgacgtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaa 43998247  T
Q  384 aatttc 389  Q
    ||||||    
T  43998248 aatttc 43998253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 48322779 - 48322666
Alignment:
Q  276 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaa 375  Q
    |||| |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |  ||||    
T  48322779 aattaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaa 48322680  T
Q  376 tcatttaaaatttc 389  Q
    ||||||||||||||    
T  48322679 tcatttaaaatttc 48322666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 283 - 371
Target Start/End: Original strand, 29118529 - 29118617
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgt 371  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||| |||| |||||||||||||||| ||||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgt 29118617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 36314695 - 36314587
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |  |||||||||    
T  36314695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 36314596  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  36314595 taaaatttc 36314587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 36314298 - 36314405
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||    
T  36314298 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 36314397  T
Q  381 taaaattt 388  Q
    ||||||||    
T  36314398 taaaattt 36314405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 9294367 - 9294278
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9294367 tccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 9294278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 10770885 - 10770780
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || |||||| ||||||||||||||||||||||| |||  |||||| |||||||||||||||||| |||| || |  ||||||||||||    
T  10770885 ttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 10770786  T
Q  384 aatttc 389  Q
    ||||||    
T  10770785 aatttc 10770780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 389
Target Start/End: Complemental strand, 10307765 - 10307693
Alignment:
Q  317 catttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  10307765 catttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10307693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 388
Target Start/End: Original strand, 10770493 - 10770597
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  ||||||||||||    
T  10770493 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 10770592  T
Q  384 aattt 388  Q
    |||||    
T  10770593 aattt 10770597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 9368720 - 9368621
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||| ||||||||||||||| ||| |||||||||| |||  ||||||| |||||||| |||| |||| ||||||||||||||||||||||||||||    
T  9368720 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaatttc 9368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 21186114 - 21186015
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||| |||||||||| |||||||||||||| ||  |||||||||||||||||||||| |||||||| ||    ||||||||||||||||||    
T  21186114 atgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcatttaaaatttc 21186015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 33689785 - 33689699
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| ||| |||||||||| ||  ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  33689785 ttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttc 33689699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 19741301 - 19741212
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||| |||||||||||||||  |||||||||||||||||||||||    
T  19741301 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcatttaaaatttc 19741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 23458388 - 23458299
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||||| |||  |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23458388 tccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttc 23458299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 40788423 - 40788528
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||||||  |||||||||||| |||| |||||||||||||||  | |||||| |||| ||| ||||||||| || |||| |||||||||||||    
T  40788423 ttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaatttacctttgcattatttaatcatttaa 40788522  T
Q  384 aatttc 389  Q
    ||||||    
T  40788523 aatttc 40788528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 42342810 - 42342899
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||||| ||| |||||||||| ||| ||||||| | || |||||||||||||||||| ||||||||||||||||||||||||    
T  42342810 tccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatcatttaaaatttc 42342899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 48322377 - 48322484
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||| | ||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||    
T  48322377 ggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 48322476  T
Q  381 taaaattt 388  Q
    ||||||||    
T  48322477 taaaattt 48322484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 31525351 - 31525491
Alignment:
Q  38 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaactta 137  Q
    ||||||||||  || ||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| ||         ||||||||| ||||    
T  31525351 tcttttgttttagggtggtttttaaggggtttttgttcgagccgttgtttgtgtggcaaccgatttccccttgtttgttttttt--tccacccaagctta 31525448  T
Q  138 ttagtgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    |||||||| ||||||| ||||  |||||| |||||| ||||||    
T  31525449 ttagtgcttcttgcacaggcttgttggttaataatattttgcc 31525491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 40506197 - 40506107
Alignment:
Q  300 tccttgcaatta-ggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| || ||||||||||| || ||   ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  40506197 tccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaatttc 40506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 53349391 - 53349465
Alignment:
Q  40 ttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatg 114  Q
    |||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||| || ||||||||||    
T  53349391 ttttgttttggggtggtttttaaggggtttttgtttgagccggtgtttgtgcggcaaccgattttcccttgtatg 53349465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 4323607 - 4323526
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||||||||||||| |||||||||| |||  |||||||| |||||||||||| ||| |||| ||||||||||||||||||||    
T  4323607 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaa 4323526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 46474837 - 46474922
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||| ||| |||||||||| |||  |||||||| ||||| |||||||||||| || |||||||||||||||||||||||    
T  46474837 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaaaattt 46474922  T

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Target: chr3; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 51994295 - 51994206
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  || |||||||||| |||  |||||||| |||| |||||||||||||| | ||||||||||||||||||||||||    
T  51994295 tccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcatttaaaatttc 51994206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 4322592 - 4322695
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||   || |||||||||||||| |||||||||| |||  |||||||| |||||||| ||| ||| |||| |||||||||||||||    
T  4322592 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcatt 4322690  T
Q  381 taaaa 385  Q
    |||||    
T  4322691 taaaa 4322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 40033865 - 40033777
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| ||   | |||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  40033865 tccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatcatttaaaattt 40033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 1079640 - 1079541
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||  ||| |||||||||| |||||||||||||| |||  ||||||||||||||||||||| ||| |||| ||  |||||||| |||||||||||    
T  1079640 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcttttaaaatttc 1079541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 6956257 - 6956356
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| ||||||||||  |||||||||||||||||  | ||||||||||||||||||| |||||||| ||   || ||||||||||||||||    
T  6956257 atgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatcatttaaaatttc 6956356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 13949121 - 13949071
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagt 331  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13949121 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 13949071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 40758166 - 40758252
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||||| |||||||||||   ||||||||||||||||||||||||    
T  40758166 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct-gcaatttaccc--gcattgtttaatcatttaaaatttc 40758252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 389
Target Start/End: Original strand, 43384321 - 43384391
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| |||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  43384321 tttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 43384391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 47856396 - 47856494
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||| |||||||| ||||| |||||||||| |||  ||||||||||||||||| ||| |||| ||| ||  |||||||||||||||||||    
T  47856396 atgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcatttaaaattt 47856494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 53756766 - 53756852
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| ||| ||||||||||  |  ||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||    
T  53756766 ttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaaaatttc 53756852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 55052638 - 55052568
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  55052638 tttaaaaattggtccatgtaatcgttaatcatggcaatttacctctgcattgtttaatcatttaaaatttc 55052568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 54466430 - 54466531
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| |||| || | || |  ||||||||||||||||    
T  54466430 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcatttaaaatt 54466529  T
Q  388 tc 389  Q
    ||    
T  54466530 tc 54466531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 8041616 - 8041724
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  8041616 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 8041715  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  8041716 taaaatttc 8041724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 33506180 - 33506228
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagt 331  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33506180 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 33506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 9358876 - 9358753
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgg 155  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||        |||||||||| ||||||||| || || ||||||    
T  9358876 ttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctatg-tttttttctccacccaagcttattagtacttctcgcacgg 9358778  T
Q  156 gctaattggttgataatagtttgcc 180  Q
    |||  |||| | |||||| ||||||    
T  9358777 gcttgttgggtaataatattttgcc 9358753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 33154877 - 33154979
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||||||| |||| |||||||||| |||||||||||||| |||  ||||||||||||||||| ||| ||| ||||  |  |||||||||||    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatcatt 33154976  T
Q  381 taa 383  Q
    |||    
T  33154977 taa 33154979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 55166965 - 55166895
Alignment:
Q  40 ttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttg 110  Q
    |||||| ||||| ||||||||||||||| ||||||||||||   ||||||||||||||||| |||||||||    
T  55166965 ttttgtgtaggggtggtttttaaggggtttttgttcgagccaaagtttgtgcggcaaccgatttccccttg 55166895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 28934861 - 28934736
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgg 155  Q
    |||||||||||| |||||||||||||||||||||  ||||||||| |||||||||| |         |||||||| | |||||||||||| |||||||||    
T  28934861 tttttaaggggtttttgttcgagccggtgtttgt--ggcaaccgatttccccttgt-tttgttttttctccacccgagcttattagtgcttcttgcacgg 28934765  T
Q  156 gctaattggttgataatagtttgccaatt 184  Q
    |||  |||||| |||||| ||||| ||||    
T  28934764 gcttgttggttaataatattttgctaatt 28934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 47820904 - 47820957
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  47820904 ttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttcccctt 47820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 28956935 - 28957005
Alignment:
Q  41 tttgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 109  Q
    ||||||||| | ||||||||  ||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  28956935 tttgtttagaggtggttttttaaaggggtttttgttcgagccggtgtttgtgtggcaaccgatttcccctt 28957005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 43073175 - 43073050
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgca 152  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||||||| ||||||||||||          ||||||||| |||||||||||  ||||||    
T  43073175 tggtttttaaggggtttttgttcgagccggtgttt-taaggcaaccgatttccccttgtat-tcttttttttccacccaagcttattagtgcatcttgca 43073078  T
Q  153 cgggctaattggttgataatagtttgcc 180  Q
    ||||||  |||||| |||||| ||||||    
T  43073077 cgggcttgttggttaataatattttgcc 43073050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 388
Target Start/End: Complemental strand, 23276402 - 23276304
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||  ||| |||||||||| |||||||||||||| |||  |||||||| |||||| ||||| |||||| ||||    |||||||||||||||||    
T  23276402 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcatttaaaattt 23276304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 43608892 - 43608802
Alignment:
Q  299 gtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||||||||||  ||||||||||||| |||  |||||||||||||||| | || ||| |||| ||  ||||||||||||||||||||    
T  43608892 gtccctgcaattagggatcatttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaaaatttc 43608802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 43607789 - 43607854
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 355  Q
    |||||||| |||| |||||||| |||||||||||||||| |||  |||||||||||||||| ||||    
T  43607789 atgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatccttgcaa 43607854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 54466813 - 54466713
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  54466813 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 54466714  T
Q  388 t 388  Q
    |    
T  54466713 t 54466713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 1078546 - 1078644
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||| |||| |||||||||| |||||||||||||| |||  ||||||||||||| |||| || ||| ||||  |  ||||||||||||||||||||    
T  1078546 atgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaat-ctggtaaattaaccttgtaaagtttaatcatttaaaatttc 1078644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 3596486 - 3596432
Alignment:
Q  294 gttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcc 349  Q
    |||| |||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  3596486 gtttcgtccttgcaattaggcgtgatttaaaaattagtc-ttgtaatcgttaatcc 3596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 32431611 - 32431512
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||| |||| || ||||||| |||||||||||||| |||  || |||||||||||||| ||| ||| |||| ||  |||||| |||||||||||||    
T  32431611 atgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaatttc 32431512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 47857664 - 47857565
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| || ||||||| ||| ||||||||||  ||  ||||||||||||| |||| || ||| |||| ||  ||||||||||||||||||||    
T  47857664 atgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatttaaaatttc 47857565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 47921466 - 47921573
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| ||||||| ||||| |||| || | || |  |||||| ||    
T  47921466 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcttggcattttaaccctgcaattgttaatcgtt 47921565  T
Q  381 taaaattt 388  Q
    ||||||||    
T  47921566 taaaattt 47921573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 8431546 - 8431489
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 111  Q
    ||||||||||||||| ||||||||||||||||||| ||  |||||||| ||||||||||    
T  8431546 tggtttttaaggggtttttgttcgagccggtgttt-tgttgcaaccgatttccccttgt 8431489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 10454282 - 10454413
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnct---ccacccaaacttattagtgctcctt 149  Q
    ||||||||||||||| |||||| |||||||  ||  || ||||||||| |||||||||||||         |   |||||| | ||||||||||||||||    
T  10454282 tggtttttaaggggtttttgtttgagccggctttcttgtggcaaccgatttccccttgtatgtattttttttttcccacccgagcttattagtgctcctt 10454381  T
Q  150 gcacgggctaattggttgataatagtttgcca 181  Q
    |||||||||  |||||| |||||| |||||||    
T  10454382 gcacgggcttgttggttaataatattttgcca 10454413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 40758519 - 40758430
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||| ||||||| ||||  ||  ||| || |  ||||||||||||||||||    
T  40758519 tccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttc 40758430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 8042006 - 8041906
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||| ||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  8042006 tgatgtgtttagcccttgcaattaggcggcatttaaatattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 8041907  T
Q  388 t 388  Q
    |    
T  8041906 t 8041906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 25107213 - 25107321
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  ||||||||  ||| |||||||||| |||||||||||||| |||  | |||||| |||||||||||| || ||| | ||    |||||||||    
T  25107213 ggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcatt 25107312  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  25107313 taaaatttc 25107321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 26479079 - 26479145
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 356  Q
    |||||||| |||| ||||| |||| || ||||||||| | ||| |||||||||||||||||| ||||    
T  26479079 atgtgtttagtccctgcaaataggggtgatttaaaaaatggtccatgtaatcgttaatcctgacaat 26479145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 41558287 - 41558202
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||| ||||||||||| || ||||| ||| ||||||| |||| |||  ||| || |  ||||||||||||||||||    
T  41558287 tgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttc 41558202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 21783899 - 21783815
Alignment:
Q  305 gcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| ||| ||||||||||||||  | || ||||||||||| ||| |||| || | ||   |||||||||||||||||||    
T  21783899 gcaattaggggtcgtttaaaaattagtccttatattcgttaatccttgcattttatccctgcaaaatttaatcatttaaaatttc 21783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 389
Target Start/End: Complemental strand, 26463954 - 26463918
Alignment:
Q  353 caatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||  |||||||||||||||||||||||    
T  26463954 caatttacccttgtattgtttaatcatttaaaatttc 26463918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 34142627 - 34142575
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctgg 352  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||| ||||    
T  34142627 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatactgg 34142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 35712063 - 35712119
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 356  Q
    ||||||||||||||  ||||||||||||| ||| ||||| ||| ||||||| |||||    
T  35712063 tccttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttgcaat 35712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 11566 - 11458
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  11566 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 11467  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  11466 taaaatttc 11458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 11143 - 11248
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||| |||||||||| |||||| ||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||||||||||||||    
T  11143 ttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttacccttgcattgtttaatcatttaa 11242  T
Q  384 aatttc 389  Q
    ||||||    
T  11243 aatttc 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 40714444 - 40714552
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  40714444 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 40714543  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  40714544 taaaatttc 40714552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 49955773 - 49955665
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  49955773 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 49955674  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  49955673 taaaatttc 49955665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 40714869 - 40714761
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || |||||||||||||||    
T  40714869 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatt 40714770  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  40714769 taaaatttc 40714761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 17188954 - 17189062
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||| ||||||||||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatt 17189053  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  17189054 taaaatttc 17189062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 20760931 - 20760823
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  20760931 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 20760832  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  20760831 taaaatttc 20760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 31058483 - 31058375
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  31058483 ggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatcatt 31058384  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  31058383 taaaatttc 31058375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 49955347 - 49955454
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  49955347 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 49955446  T
Q  381 taaaattt 388  Q
    ||||||||    
T  49955447 taaaattt 49955454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 28325235 - 28325122
Alignment:
Q  275 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttta 374  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||||||||    
T  28325235 aaattaggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagtc-atgtaatcgttaattatggcaatttacccttgcattgttta 28325137  T
Q  375 atcatttaaaatttc 389  Q
    |||||||||||||||    
T  28325136 atcatttaaaatttc 28325122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 17189278 - 17189173
Alignment:
Q  280 gggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcat 379  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||    
T  17189278 gggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 17189179  T
Q  380 ttaaaa 385  Q
    ||||||    
T  17189178 ttaaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 280 - 389
Target Start/End: Original strand, 30326495 - 30326604
Alignment:
Q  280 gggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcat 379  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||| |||| ||||||||||| ||||||||||||||    
T  30326495 gggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcat 30326594  T
Q  380 ttaaaatttc 389  Q
    ||||||||||    
T  30326595 ttaaaatttc 30326604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 12906085 - 12905977
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||| | | ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  12906085 ggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 12905986  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  12905985 taaaatttc 12905977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 31050950 - 31051058
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||||||| || |||||||||||||||    
T  31050950 ggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcatt 31051049  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  31051050 taaaatttc 31051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 37929418 - 37929526
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||| |||||||| ||||||||||||||||| ||||||||||    
T  37929418 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacattatttaatcatt 37929517  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  37929518 taaaatttc 37929526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 45749842 - 45749950
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||| |||||||||||||||    
T  45749842 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatcatt 45749941  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  45749942 taaaatttc 45749950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 45750268 - 45750160
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||||| ||| |||||||||||||||    
T  45750268 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatcatt 45750169  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  45750168 taaaatttc 45750160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 35041037 - 35040932
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 35040938  T
Q  384 aatttc 389  Q
    ||||||    
T  35040937 aatttc 35040932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 8898517 - 8898625
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||| |||  ||||||||||||||    
T  8898517 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatcatt 8898616  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  8898617 taaaatttc 8898625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 8898943 - 8898835
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||  |||| ||| |||||||||||| |||||||||||||||    
T  8898943 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaatcatt 8898844  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  8898843 taaaatttc 8898835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 44523562 - 44523456
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| |   | |||||| ||||| ||||||||||||||| |||||||||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttacccttgcattgtttaatcattta 44523463  T
Q  383 aaatttc 389  Q
    |||||||    
T  44523462 aaatttc 44523456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 28324805 - 28324912
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||  |||||||||||||||||| ||||||| |||||  ||||||||| |||||||| |||||||||||| |||| ||||||||||    
T  28324805 ggcttaatgatgtgtttcctccttgcaattaggcgtcgtttaaaa-ttagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatcatt 28324903  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  28324904 taaaatttc 28324912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 6367581 - 6367670
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6367581 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 6367670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 289 - 389
Target Start/End: Original strand, 14878979 - 14879079
Alignment:
Q  289 gatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||| |||| |||||||||||||| ||| |||||||||| ||  ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  14878979 gatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaattt 14879078  T
Q  389 c 389  Q
    |    
T  14879079 c 14879079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 32558533 - 32558425
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||   | |||||| ||||||||  |||||||||||  | ||||||||||||    
T  32558533 ggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatcatt 32558434  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  32558433 taaaatttc 32558425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 28011765 - 28011658
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||    
T  28011765 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 28011666  T
Q  381 taaaattt 388  Q
    ||||||||    
T  28011665 taaaattt 28011658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 26990589 - 26990729
Alignment:
Q  38 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaactta 137  Q
    |||||||||||||| ||||||||||||| | |||||| ||||||||| ||||||||||| ||| || ||||||||||         ||||||||| ||||    
T  26990589 tcttttgtttaggggtggtttttaagggatttttgtttgagccggtgcttgtgcggcaatcgattttcccttgtatgttttttt--tccacccaagctta 26990686  T
Q  138 ttagtgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    |||||||| |||||||||||| ||||||| |||||| ||||||    
T  26990687 ttagtgcttcttgcacgggcttattggttaataatattttgcc 26990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 24009950 - 24009861
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  || |||||||||| |||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  24009950 tccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 24009861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 25647903 - 25647992
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  25647903 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttc 25647992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 34464468 - 34464557
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||    
T  34464468 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaatttc 34464557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 24905167 - 24905274
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| |||||||| |||| || |  |||||||||    
T  24905167 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatt 24905266  T
Q  381 taaaattt 388  Q
    ||||||||    
T  24905267 taaaattt 24905274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 26024444 - 26024527
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  26024444 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaa 26024527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 47028919 - 47028994
Alignment:
Q  38 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 113  Q
    |||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  47028919 tcttttgtttaggggtagtttttaaggggtttttgttcgagccggtgtttttgcggcaaccgatttccccttgtat 47028994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 41098754 - 41098840
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  41098754 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 41098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 46163056 - 46163138
Alignment:
Q  307 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||| ||| |||||||||| ||| ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  46163056 aattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 46163138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 7371293 - 7371398
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||   |||||||| | || |||| |||||| |||| ||||||||||| ||||||    
T  7371293 ttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcattgtttaattatttaa 7371392  T
Q  384 aatttc 389  Q
    ||||||    
T  7371393 aatttc 7371398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 7820973 - 7821062
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| ||||| ||||||||  |||||||| |||||||  |||||||||||| ||||||||||||||||||||||||    
T  7820973 tccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcatttaaaatttc 7821062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 13914476 - 13914387
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||  ||  |||||||||| ||| ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  13914476 tccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcatttaaaatttc 13914387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 17662259 - 17662170
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| || ||| |||||||||| ||   | |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17662259 tccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 17662170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 19515838 - 19515927
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||| |||| ||||||||||| ||||||||||| ||||||||||||    
T  19515838 tccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaattatttaaaatttc 19515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 23209736 - 23209647
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  23209736 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatcatttacaatttc 23209647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 35038458 - 35038563
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||| |||||||| ||||||||||||| | ||||||||||||||  || ||||||||||||||||| |||| ||||  ||  |||||||||||||||||    
T  35038458 ttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaa 35038557  T
Q  384 aatttc 389  Q
    ||||||    
T  35038558 aatttc 35038563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 36694657 - 36694568
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||  |||||||||| |||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  36694657 tccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 36694568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 36710758 - 36710669
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||  |||||||||| |||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  36710758 tccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 36710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 37578601 - 37578512
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| || ||| |||||||||| ||   |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  37578601 tccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcatttaaaatttc 37578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 34464858 - 34464770
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||  |||||||||| ||| ||||||||| ||||| ||||||||||||||| || ||||||||||||||||||||    
T  34464858 tccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaattt 34464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 19018057 - 19017950
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| |||| ||||||||||||   ||| |||||||||| ||| ||||| ||| ||||||||||||||||||||| |||| ||||||||||    
T  19018057 ggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcatt 19017958  T
Q  381 taaaattt 388  Q
    ||||||||    
T  19017957 taaaattt 19017950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 1841481 - 1841567
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| | ||| |||||||||| |||   ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  1841481 ttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatcatttaaaatttc 1841567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 12172942 - 12173082
Alignment:
Q  38 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaactta 137  Q
    ||||||||||  || ||||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||||| ||         ||||||||| ||||    
T  12172942 tcttttgttttagggtggtttttaaggggtttttgttcgagctgatgtttgtgtggcaaccgatttccccttgtttgttttttt--tccacccaagctta 12173039  T
Q  138 ttagtgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    |||||||| ||||||||||||  |||||| |||||| ||||||    
T  12173040 ttagtgcttcttgcacgggcttgttggttaataatattttgcc 12173082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 40210776 - 40210690
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| | | |||||||||| |||  |||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  40210776 ttgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 40210690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 25885419 - 25885358
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcg 342  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  25885419 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcg 25885358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 40772526 - 40772615
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||||| |||  |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||    
T  40772526 tccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 40772615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 42248492 - 42248581
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||  ||| |||||||||| |||  |||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  42248492 tccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcatttaaaatttc 42248581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 35152362 - 35152450
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||  ||| |||||||||| |||  | |||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  35152362 tccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcatttaaaattt 35152450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 5734010 - 5734116
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| ||| ||||||||||||||| ||| |||||||||| |||| |||||||| ||||||| |||| |||  ||| |||||||||||||||    
T  5734010 ggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtca-tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 5734108  T
Q  381 taaaattt 388  Q
    ||||||||    
T  5734109 taaaattt 5734116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 32132313 - 32132412
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| | |||||||  |||||||||||||| ||| ||||||||||||||||| |||| |||| ||||||  ||||||||| ||||||||||    
T  32132313 atgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaattaaaatttc 32132412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 1103515 - 1103569
Alignment:
Q  335 tgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1103515 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 1103569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 4960562 - 4960648
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| ||| ||||||||||  ||  |||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4960562 ttgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttc 4960648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 32917279 - 32917368
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  || |||||||||| |||  |||||||| |||||||| || ||||| ||| ||||||||||||||||||||||||    
T  32917279 tccttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttc 32917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 388
Target Start/End: Complemental strand, 52134471 - 52134358
Alignment:
Q  275 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttta 374  Q
    |||| ||||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| |||| || | || |  |||    
T  52134471 aaatagggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgtta 52134372  T
Q  375 atcatttaaaattt 388  Q
    ||| ||||||||||    
T  52134371 atcgtttaaaattt 52134358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 7371595 - 7371529
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaat 347  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||    
T  7371595 ggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaat 7371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 33442989 - 33442883
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    |||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||||    
T  33442989 cttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcattta 33442890  T
Q  383 aaatttc 389  Q
    |||||||    
T  33442889 aaatttc 33442883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 47999501 - 47999415
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaat 386  Q
    |||||| ||||||| ||| |||||||||| |||  |||||||| ||||| ||||||||||||| | |||| ||||||||||||||||    
T  47999501 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcatttaaaat 47999415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 30711346 - 30711435
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||  ||||||||||  ||  | |||||| ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  30711346 tccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatttaaaatttc 30711435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 43268732 - 43268679
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  43268732 ttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttcccctt 43268679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 10303932 - 10304031
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||  ||||| |||| |||||||||||| |  || ||||| ||||||||||||||||||| ||||| ||   |||||||||||||||||||    
T  10303932 atgtgtttggtctctgcaaataggagtcatttaaaaaatgatctatgtattcgttaatcctggcaatttgcccttccaaaatttaatcatttaaaatttc 10304031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 10304274 - 10304175
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| ||||| |||| |||||||||||| | ||||||||| |||||||| |||||||||| || |  ||   |||||||||||||||||||    
T  10304274 atgtgtttagtccctgcaaataggggtcatttaaaaaatggtcaatgtattcgttaattctggcaatttgccttcccaaaatttaatcatttaaaatttc 10304175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 17691228 - 17691327
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||| |||||| ||| |||| ||| |||||||||| |||  |||||||| ||||||| |||| |||  ||| ||||||||||||||||||||||||    
T  17691228 atgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttc 17691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 33442594 - 33442701
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  33442594 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 33442693  T
Q  381 taaaattt 388  Q
    ||||||||    
T  33442694 taaaattt 33442701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 183581 - 183511
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| |||  |||||||| ||||||| ||||||||||| | |||| |||||||||||||||||||    
T  183581 tttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcatttaaaatttc 183511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 13914087 - 13914176
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||| ||||||| |||| |||  ||| || |  ||||||||||||||||||    
T  13914087 tccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttc 13914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 17692594 - 17692505
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||  |||  ||| |||| ||||||| |||| ||| | || ||||||||||||||||||||||||    
T  17692594 tccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaaaatttc 17692505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 31514707 - 31514606
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | |||| |||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  ||||||||||||||||    
T  31514707 tgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattattaatcatttaaaatt 31514608  T
Q  388 tc 389  Q
    ||    
T  31514607 tc 31514606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 34849030 - 34849119
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| |||| |||||||| ||   |||||||||||||||||||    
T  34849030 tccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttc 34849119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 34850474 - 34850385
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| |||| |||||||| ||   |||||||||||||||||||    
T  34850474 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttc 34850385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 42533043 - 42533099
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 356  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||    
T  42533043 tccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttgcaat 42533099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 43758875 - 43758930
Alignment:
Q  334 atgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| |||| ||| |||||||| ||| ||||||||||||||||||||||||    
T  43758875 atgtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttc 43758930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 42442151 - 42442105
Alignment:
Q  41 tttgtttagggttggtttttaaggggtatttgttcgagccggtgttt 87  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  42442151 tttgtttaggggtggtttttaaggggtttttgttcgagtcggtgttt 42442105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 44522147 - 44522249
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||||||| |||| ||||||||||  ||||||||||||| | |  |||||||||||||||| |||| ||| ||||  |  |||||||||||    
T  44522147 ggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatccttgtaaagtttaatcatt 44522246  T
Q  381 taa 383  Q
    |||    
T  44522247 taa 44522249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 52134068 - 52134146
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 359  Q
    |||||| |||||||||| | |||||||||||||||  ||||||||||| |||  |||||| | ||||||||||| ||||    
T  52134068 ggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcctggcatttta 52134146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 8463097 - 8462980
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgg 155  Q
    |||||||||||| |||||||||||||  |||| || ||||||||| || ||||||||||        |||||||| | || ||||||||| ||||||||     
T  8463097 tttttaaggggtttttgttcgagccgacgtttttgtggcaaccgattttcccttgtatgtattttttctccacccgagctaattagtgcttcttgcacga 8462998  T
Q  156 gctaattggttgataata 173  Q
    |||  |||||| ||||||    
T  8462997 gcttgttggttaataata 8462980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 24905560 - 24905456
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || ||||||||||||| |  || |||||||||| |||  |||||| | |||||||||||||||| || | || |  ||||||||||||    
T  24905560 ttaatgatgtgattagtccttgcaattatggatcgtttaaaaattcgtc-ctgtaattgctaatcctggcaatttagccctgcaattgttaatcatttaa 24905462  T
Q  384 aatttc 389  Q
    ||||||    
T  24905461 aatttc 24905456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 389
Target Start/End: Original strand, 28011390 - 28011471
Alignment:
Q  308 attaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |  ||||||||||||||||||    
T  28011390 attaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttc 28011471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 31197088 - 31197168
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| |||||||||||||| |||  |||| ||||||||||||| || |||||||| ||     |||||||||||||||||    
T  31197088 tgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----taatcatttaaaatttc 31197168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 49723135 - 49723046
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  49723135 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatttc 49723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 25884701 - 25884745
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaa 325  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||    
T  25884701 ggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaa 25884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 31514325 - 31514425
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||||||| ||   |||||| |||||| |||||| |||| || | || |  |||||| |||||||||    
T  31514325 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaattctggcattttaaccctgcaattgttaatcgtttaaaatt 31514424  T
Q  388 t 388  Q
    |    
T  31514425 t 31514425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 31833898 - 31833957
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 113  Q
    ||||||||||||||| |||||||||||||||| || || ||||||||| || |||||||||    
T  31833898 tggtttttaaggggtttttgttcgagccggtg-ttatgtggcaaccgattttcccttgtat 31833957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 4716475 - 4716538
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctg 351  Q
    |||||||||| | ||||||||||||| | |||||||||||| ||| ||||||| | ||||||||    
T  4716475 tgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccatgtaattgctaatcctg 4716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 35473650 - 35473705
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 355  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||    
T  35473650 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 9443581 - 9443679
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||||||||| |||| |||||||||||| | |||  |||| || |||||||||||| |||  |||  ||   ||||||||||||||||||    
T  9443581 atgtgtttagtccttgcaaataggggtcatttaaaaaatggtctctgtattccttaatcctggcattttgtcctcccaaaatttaatcatttaaaattt 9443679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 385
Target Start/End: Complemental strand, 13300310 - 13300228
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    ||||||||||||||| |||||||||| |||  |||| ||  ||||||| |||| |||| |||||||| |||||| | ||||||    
T  13300310 ttgcaattaggcgtcgtttaaaaattggtctctgtattcactaatccttgcaaattactcttacattctttaataacttaaaa 13300228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 389
Target Start/End: Complemental strand, 26024822 - 26024712
Alignment:
Q  279 tgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatca 378  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||  |||||||| ||||||| ||||  ||  ||| || |  |||||||    
T  26024822 tgggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatca 26024723  T
Q  379 tttaaaatttc 389  Q
    |||||||||||    
T  26024722 tttaaaatttc 26024712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 32133313 - 32133243
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| |||  |||||||||||||| |||||| ||| |||  ||  ||||||||||||||||||||    
T  32133313 tttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatcatttaaaatttc 32133243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 40435364 - 40435414
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcct 350  Q
    |||||||||||||| ||| |||||||||| |||| |||| |||||||||||    
T  40435364 tccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatcct 40435414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 30711736 - 30711647
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  30711736 tccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 30711647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 37578211 - 37578300
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  37578211 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaatcatttaaaatttc 37578300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 41956016 - 41955959
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 113  Q
    |||||||||| | ||||||||||||||||||  |  ||||||||| ||||||||||||    
T  41956016 tttttaagggatttttgttcgagccggtgttattatggcaaccgatttccccttgtat 41955959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 46900005 - 46899920
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| | |||||||||||||| ||||||||| ||| |||| || ||||  || |||| || |  ||||||||||||||||||    
T  46900005 tgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaatttc 46899920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 35152739 - 35152683
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 356  Q
    |||||||||||||| ||| ||||||||||||||  |||| ||| ||||||| |||||    
T  35152739 tccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttgcaat 35152683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 46757301 - 46757365
Alignment:
Q  45 tttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 109  Q
    ||||||| |||||||||| |||| ||||||||||| ||||||  || ||||| ||| ||||||||    
T  46757301 tttaggggtggtttttaaagggtttttgttcgagctggtgttattgtggcaatcgatttcccctt 46757365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 12662 - 12557
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12662 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 12563  T
Q  384 aatttc 389  Q
    ||||||    
T  12562 aatttc 12557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 12249 - 12348
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||| || |||||| || | || |||||||||||      ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  12249 ttaatgatgtgtttcgtcgttacaattaagcattatataaaaattagt------aatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 12342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 8e-43; HSPs: 88)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 15229931 - 15230039
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||  ||||||||||||||    
T  15229931 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatcatt 15230030  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  15230031 taaaatttc 15230039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 234166 - 234058
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  234166 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 234067  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  234066 taaaatttc 234058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 710577 - 710469
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  710577 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 710478  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  710477 taaaatttc 710469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 747789 - 747681
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  747789 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 747690  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  747689 taaaatttc 747681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 871684 - 871576
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  871684 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 871585  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  871584 taaaatttc 871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 7983428 - 7983536
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  7983428 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 7983527  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  7983528 taaaatttc 7983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 44664508 - 44664616
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatt 44664607  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  44664608 taaaatttc 44664616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 44664932 - 44664826
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 44664833  T
Q  383 aaatttc 389  Q
    |||||||    
T  44664832 aaatttc 44664826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 10445758 - 10445653
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  10445758 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 10445659  T
Q  384 aatttc 389  Q
    ||||||    
T  10445658 aatttc 10445653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 25124566 - 25124671
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25124566 ttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 25124665  T
Q  384 aatttc 389  Q
    ||||||    
T  25124666 aatttc 25124671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 15230357 - 15230249
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||| || |||||||||||| |||||||||||||||    
T  15230357 ggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatcatt 15230258  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  15230257 taaaatttc 15230249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 35634525 - 35634417
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||    
T  35634525 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 35634426  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  35634425 taaaatttc 35634417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 278 - 389
Target Start/End: Complemental strand, 25124992 - 25124881
Alignment:
Q  278 ttgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatc 377  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||  |||||||| |||| |||||||||||||||| ||||||||||||    
T  25124992 ttgggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatc 25124893  T
Q  378 atttaaaatttc 389  Q
    ||||||||||||    
T  25124892 atttaaaatttc 25124881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 6471693 - 6471798
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||  | |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  6471693 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 6471792  T
Q  384 aatttc 389  Q
    ||||||    
T  6471793 aatttc 6471798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 37542227 - 37542332
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  37542227 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 37542326  T
Q  384 aatttc 389  Q
    ||||||    
T  37542327 aatttc 37542332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 8998113 - 8998009
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||| || |||||||||||| |||||||||||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcattta 8998014  T
Q  383 aaatt 387  Q
    |||||    
T  8998013 aaatt 8998009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 42945537 - 42945432
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||   |||||||| |||||||| |||||||| ||| ||||||||||||||||||    
T  42945537 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaa 42945438  T
Q  384 aatttc 389  Q
    ||||||    
T  42945437 aatttc 42945432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 40318373 - 40318284
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40318373 tccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 40318284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 41353577 - 41353682
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||||   |||||||| |||||||  |||||||||||| ||||||||||||||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcatttaa 41353676  T
Q  384 aatttc 389  Q
    ||||||    
T  41353677 aatttc 41353682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 41353999 - 41353891
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||||  |||||||  |||||||| |||||||||||  |||| ||||||||||    
T  41353999 ggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccctagcattatttaatcatt 41353900  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  41353899 taaaatttc 41353891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 23505052 - 23505159
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||| | ||||| ||||||||||||||| || |  |||||||||    
T  23505052 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcatt 23505151  T
Q  381 taaaattt 388  Q
    ||||||||    
T  23505152 taaaattt 23505159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 21432695 - 21432801
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||  |||||||  ||||  || |||||||||||| |||||||||||||||||    
T  21432695 cttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaattttgacaatttacccttgcattgtttaatcattta 21432794  T
Q  383 aaatttc 389  Q
    |||||||    
T  21432795 aaatttc 21432801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 5200623 - 5200486
Alignment:
Q  42 ttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattag 141  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||        |||||||||||||||||||    
T  5200623 ttgtttaggggtgatttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgattttcccttgtatg-tttttttctccacccaaacttattag 5200525  T
Q  142 tgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    || | ||||||||| ||  |||||| |||||| ||||||    
T  5200524 tgtttcttgcacggacttgttggttaataatattttgcc 5200486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 8316997 - 8316908
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8316997 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 8316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 16388935 - 16388846
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| ||  ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16388935 tccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 16388846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 23663923 - 23663834
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23663923 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 23663834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 11674695 - 11674803
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |  |||||||||    
T  11674695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 11674794  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  11674795 taaaatttc 11674803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 36325628 - 36325524
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||| |||| || |  ||||||||||||    
T  36325628 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 36325529  T
Q  384 aattt 388  Q
    |||||    
T  36325528 aattt 36325524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 2535969 - 2535870
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||| |||| |||||||||| |||||||||||||| |||  ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  2535969 atgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaatttc 2535870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 371
Target Start/End: Original strand, 8997859 - 8997946
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgt 371  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||| |||||||| |||||||||||| ||||||    
T  8997859 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttacccttgcattgt 8997946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 11675091 - 11674984
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||    
T  11675091 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 11674992  T
Q  381 taaaattt 388  Q
    ||||||||    
T  11674991 taaaattt 11674984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 12273262 - 12273173
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  12273262 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaaaatttc 12273173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 23698653 - 23698564
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23698653 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 23698564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 39071695 - 39071784
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  39071695 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 39071784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 38003829 - 38003749
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 364  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||||  |||||||| |||||||||||||||||||||    
T  38003829 ttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcctggcaatttaccctt 38003749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 23507853 - 23507746
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||  |||  |||||| | ||||||| ||||||||||||| || |  |||||||||    
T  23507853 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcatt 23507754  T
Q  381 taaaattt 388  Q
    ||||||||    
T  23507753 taaaattt 23507746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 4995065 - 4994977
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| |||  |||||||| |||||||| |||||||||||| |||||||||||||||| |||||||    
T  4995065 tccttgcaattaggggtcatttaaaaattggtcc-tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttcaaatttc 4994977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 13186079 - 13186168
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  || |||||||||| ||  ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  13186079 tccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 13186168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 36928495 - 36928584
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||| | ||| |||||||||| ||| ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  36928495 tcctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 36928584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 37542648 - 37542543
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||| ||||||||  ||||| ||||||||||||||||||||||| ||   ||| ||||||||| |||  ||||||||||| ||||||||||||||||||    
T  37542648 ttaataatgtgtttcatccttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcatttaa 37542549  T
Q  384 aatttc 389  Q
    ||||||    
T  37542548 aatttc 37542543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 36325234 - 36325342
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||| |||||||| ||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |  |||||||||    
T  36325234 ggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 36325333  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  36325334 taaaatttc 36325342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 387
Target Start/End: Complemental strand, 22915767 - 22915680
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    ||||||||| ||||  || |||||||||| ||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  22915767 tccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatt 22915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 27500092 - 27500197
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||| ||||| |||||||||||||  ||||||||||||||||||| ||| ||||| |||| ||| ||| |||| | | |||||||||||||| |||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaattctgacaaattactcatgcattgtttaatcatataa 27500191  T
Q  384 aatttc 389  Q
    ||||||    
T  27500192 aatttc 27500197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 31608922 - 31608833
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||||| ||| ||||| ||| ||||||| ||||||||||||| |||||| |||||||||||||||||    
T  31608922 tccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcatttaaaatttc 31608833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 38955722 - 38955811
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| ||  || |||||||||| |||| |||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||    
T  38955722 tccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttc 38955811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 24200762 - 24200626
Alignment:
Q  41 tttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttatta 140  Q
    ||||||||||| ||||||||||| | | ||||||||||||||||||| |||||||||||| |||||||||||||         ||||||||| |||||||    
T  24200762 tttgtttaggggtggtttttaagtgtt-tttgttcgagccggtgtttttgcggcaaccgatttccccttgtatgttttttt--tccacccaagcttatta 24200666  T
Q  141 gtgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    ||||| ||||||||| ||  ||| || |||||| ||||||    
T  24200665 gtgcttcttgcacggacttgttgattaataatattttgcc 24200626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 39474579 - 39474654
Alignment:
Q  314 cgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||||| |   |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  39474579 cgtcatttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 39474654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 10749927 - 10749853
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 364  Q
    |||||||| |||||||||||||||  ||||||||||||| ||| |||||||||||||||||| ||| ||||||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattaccctt 10749853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 4406069 - 4405980
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||| ||  |||||||||| ||| ||||| | ||||||||| ||||||||||||| || |||||||||||||||||||||    
T  4406069 tccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatttaaaatttc 4405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 6472078 - 6472009
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||  |||||||||  ||||||| |||||||||||| |||||||||||||||||||||||    
T  6472078 tttaaaaattagttcatgtaatcgccaatcctgacaatttacccttgcattgtttaatcatttaaaattt 6472009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 38845696 - 38845588
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  38845696 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 38845597  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  38845596 taaaatttc 38845588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 40930972 - 40930833
Alignment:
Q  39 cttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttat 138  Q
    ||||||||||||| |||||||||||| || ||||||||||||| |||||||  | ||||||| |||||||||| ||         ||||||| | |||||    
T  40930972 cttttgtttaggggtggtttttaaggagtttttgttcgagccgttgtttgt--gacaaccgatttccccttgtttgtatttttt-tccacccgagcttat 40930876  T
Q  139 tagtgctccttgcacgggctaattggttgataatagtttgcca 181  Q
    ||||||| ||||||||||||  |||||| |||||| |||||||    
T  40930875 tagtgcttcttgcacgggcttgttggttaataatattttgcca 40930833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 6472441 - 6472395
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaat 327  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  6472441 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 1425430 - 1425342
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||  ||| |||||||||| |||  |||||||  ||||||||||||||||||| | ||||||||||||||||||||||||    
T  1425430 tccttgtaattagaggtcgtttaaaaattggtcc-tgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 1425342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 34061737 - 34061648
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||| |||| ||||||||||  || ||||| ||| ||||||| |||| || ||||| |||| |||||||||||||||||||    
T  34061737 tccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcatttaaaatttc 34061648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 2266492 - 2266600
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  2266492 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 2266591  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  2266592 taaaatttc 2266600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 8746324 - 8746432
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  ||||||||  ||| |||||||||| |||||||||||||  |||| |||||||||||||| || ||| |||||||| ||    |||||||||    
T  8746324 ggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaatcatt 8746423  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  8746424 taaaatttc 8746432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 35449986 - 35449898
Alignment:
Q  301 ccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||| |||||||||||| ||| ||||||| | ||||||||||| |||| || | || |  ||||||||||||||||||    
T  35449986 ccttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttc 35449898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 42945158 - 42945222
Alignment:
Q  325 aattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||  |||||| | |||||||| ||||||||||||| |||||||||||||||||||||||    
T  42945158 aattagtccctgtaattgctaatcctgacaatttacccttatattgtttaatcatttaaaatttc 42945222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 2266889 - 2266782
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  2266889 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 2266790  T
Q  381 taaaattt 388  Q
    ||||||||    
T  2266789 taaaattt 2266782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 10124847 - 10124922
Alignment:
Q  38 tcttttgtttagggttggtttt-taaggggtatttgttcgagccggtg-tttgtgcggcaaccgacttccccttgt 111  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| |||||  ||||||||| ||||||||||    
T  10124847 tcttttgtttaggggtggttttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttccccttgt 10124922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 40775650 - 40775757
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| ||   |||||| ||||||||||||| |||| || | || |  |||||| ||    
T  40775650 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtt 40775749  T
Q  381 taaaattt 388  Q
    ||||||||    
T  40775750 taaaattt 40775757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 43181571 - 43181472
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||| ||| ||| |||||||  || ||||||||||  || ||| ||||||||||||| | || ||| |||||||||||||||||||||||||||||    
T  43181571 atgtatttcgtctttgtaattagggatcgtttaaaaattgatccatgcaatcgttaatccttgtaaattagccttacattgtttaatcatttaaaatttc 43181472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 21433076 - 21433018
Alignment:
Q  324 aaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||| ||||||||||||||  || |||||||||||| |||||||||||||||||    
T  21433076 aaattagtccatgtaatcgttaattttgacaatttacccttgcattgtttaatcattta 21433018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 27500492 - 27500434
Alignment:
Q  293 tgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctg 351  Q
    ||||| ||||||||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctg 27500434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 2534718 - 2534803
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| | ||| |||||||||| ||  ||||||||| ||||||| ||||  ||| ||| ||||||||||||||||||||||||    
T  2534718 tgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcatttaaaatttc 2534803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 8316672 - 8316761
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||||||||||| ||||  || |||| || |  ||||||||||||||||||    
T  8316672 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 8316761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 35756606 - 35756690
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| |||||||||||||| |||  | |||||  |||||||| ||||||| ||||  |||||||||||||||||||||||    
T  35756606 tgcaattaggggtcatttaaaaattggtct-tataatcactaatcctgacaatttatccttgaattgtttaatcatttaaaatttc 35756690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 385
Target Start/End: Complemental strand, 42803627 - 42803542
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||||||||||||  ||| |||||||||| |||  | |||||   |||| ||||||||||||||| ||||||||||||||||||||    
T  42803627 tccttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatcatttaaaa 42803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 3041463 - 3041563
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||| ||| |||||||||||| ||| ||||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  3041463 tgatgtgtttagcccttgcaattaagcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 3041562  T
Q  388 t 388  Q
    |    
T  3041563 t 3041563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 3041853 - 3041745
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| |  |||||||||||||| |||||||||| | |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  3041853 ggcttattgatgtgtttagctcttgcaattaggcggcatttaaaaactcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 3041754  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  3041753 taaaatttc 3041745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 36186439 - 36186387
Alignment:
Q  337 taatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| |||||||| ||||||||| || ||||||||||||||||||||||||    
T  36186439 taatcgctaatcctgacaatttacctttgcattgtttaatcatttaaaatttc 36186387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 38003487 - 38003563
Alignment:
Q  313 gcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||||||||   |||||||| ||||  || ||||||| ||||  |||||||||||||||||||||||    
T  38003487 gcgtcatttaaaaattagtttctgtaatcgctaattatgacaatttaaccttgtattgtttaatcatttaaaatttc 38003563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 40776047 - 40775939
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | |||||||| || |||| || | || |  |||||||||    
T  40776047 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 40775948  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  40775947 taaaatttc 40775939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 44406864 - 44406964
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  44406864 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 44406963  T
Q  388 t 388  Q
    |    
T  44406964 t 44406964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 44407254 - 44407146
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  ||  |||||| | ||||||| ||| |||| || | || |  |||||||||    
T  44407254 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctagcattttaaccctgcaattgttaatcatt 44407155  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  44407154 taaaatttc 44407146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 34060482 - 34060593
Alignment:
Q  274 aaaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttt 373  Q
    |||||| |||||||  |||| |||  ||||||||||||  |||| |||||||||| ||| ||||||||| ||||||| |||| ||  | || |||| |||    
T  34060482 aaaattaggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattcttt 34060581  T
Q  374 aatcatttaaaa 385  Q
    ||||||||||||    
T  34060582 aatcatttaaaa 34060593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 38862671 - 38862726
Alignment:
Q  334 atgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| |||| |||| |||||||| || ||||||||||||||||||||||||    
T  38862671 atgtaatcgctaatactggtaatttacctttgcattgtttaatcatttaaaatttc 38862726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 30459390 - 30459475
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    ||||| |||||||||||| |||||||||||||| ||||| ||  ||||||| |||| ||||  || |||| |||||||| ||||||    
T  30459390 tccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaattacaattgcattctttaatcacttaaaa 30459475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 30836265 - 30836212
Alignment:
Q  56 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 109  Q
    |||| ||||||| ||||||||||||||| |||||||||||| ||| ||||||||    
T  30836265 ttttaaaggggtttttgttcgagccggtatttgtgcggcaatcgatttcccctt 30836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 9337048 - 9337128
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||  ||||||| |||||| |||  |||||||||||||  |||||| |||||||| ||  ||||||||||||||    
T  9337048 ttgcaattagaggtcattttaaaattggtccttgtaatcgttaattttggcaaattaccctttcaaagtttaatcatttaa 9337128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 38845306 - 38845406
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  38845306 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 38845405  T
Q  388 t 388  Q
    |    
T  38845406 t 38845406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 25829408 - 25829338
Alignment:
Q  41 tttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 111  Q
    |||||||| || ||||||||||||||| ||| ||| ||||||||||| |  || |||||| ||||||||||    
T  25829408 tttgtttatgggtggtttttaaggggtttttattcaagccggtgtttatagggaaaccgatttccccttgt 25829338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 38086560 - 38086419
Alignment:
Q  41 tttgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnn-ctccacccaaactta 137  Q
    ||||||||||| ||||||||  ||||||| |||||||||||| | ||||||  ||||||||| || ||||| | ||         |||||||| | ||||    
T  38086560 tttgtttaggggtggttttttaaaggggtttttgttcgagccagagtttgtatggcaaccgattttcccttctttgtatttttttctccacccgagctta 38086461  T
Q  138 ttagtgctccttgcacgggctaattggttgataatagtttgc 179  Q
    |||||||  |||||||||||| ||||||| |||||| |||||    
T  38086460 ttagtgcgtcttgcacgggcttattggttaataatattttgc 38086419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 12272937 - 12273026
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  || |||||||||| |||  |||||||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  12272937 tccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttc 12273026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 13186468 - 13186379
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||  ||||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  13186468 tccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 13186379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 38862972 - 38862883
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  38862972 tccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 38862883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 34685685 - 34685578
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| |||| ||||||||||||||  || |||||||||| |||  |||| ||| ||||||| ||||  || ||||||| |  |||||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggtc-ttgtattcgctaatccttgcaaactagccttacaatcattaatcatt 34685587  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  34685586 taaaatttc 34685578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 8e-43; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 8710894 - 8710786
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||    
T  8710894 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 8710795  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  8710794 taaaatttc 8710786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 28226170 - 28226062
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 28226071  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  28226070 taaaatttc 28226062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 15604339 - 15604447
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  15604339 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 15604438  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  15604439 taaaatttc 15604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 15604762 - 15604657
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  15604762 ttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 15604663  T
Q  384 aatttc 389  Q
    ||||||    
T  15604662 aatttc 15604657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 8342190 - 8342295
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||| |||| ||||||||||||||||||    
T  8342190 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcatttaa 8342289  T
Q  384 aatttc 389  Q
    ||||||    
T  8342290 aatttc 8342295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 282 - 389
Target Start/End: Complemental strand, 41588483 - 41588376
Alignment:
Q  282 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattt 381  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||  |||||||| |||| |||||||||||| ||||||||||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcattt 41588384  T
Q  382 aaaatttc 389  Q
    ||||||||    
T  41588383 aaaatttc 41588376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 389
Target Start/End: Original strand, 11830365 - 11830472
Alignment:
Q  282 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattt 381  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||| | |||||||  |||||||||||| ||||||||||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcattt 11830464  T
Q  382 aaaatttc 389  Q
    ||||||||    
T  11830465 aaaatttc 11830472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 8342602 - 8342497
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  |||||||| |||||||||||| ||||||||||| ||||||    
T  8342602 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaattatttaa 8342503  T
Q  384 aatttc 389  Q
    ||||||    
T  8342502 aatttc 8342497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 6573543 - 6573647
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||  ||| | ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||  ||||||||||||||    
T  6573543 ggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcatt 6573642  T
Q  381 taaaa 385  Q
    |||||    
T  6573643 taaaa 6573647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 41587235 - 41587342
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||| |||  |||||||||||||||||| || |||||||| |||||||||||||||    
T  41587235 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtcc-tgtaatcgttaatcctggaaaattacccttgcattgtttaatcatt 41587333  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  41587334 taaaatttc 41587342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 284 - 385
Target Start/End: Original strand, 6573050 - 6573150
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||||    
T  6573050 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaattta-ccttgcattgtttaatcatttaa 6573148  T
Q  384 aa 385  Q
    ||    
T  6573149 aa 6573150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 39498329 - 39498418
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39498329 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttc 39498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 44714170 - 44714081
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| ||||||||||||||  |||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44714170 tccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 44714081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 25892394 - 25892498
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||  ||  || |||||||| ||||||||||||| ||| ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  25892394 ggcttaatgatgtgtttcatctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatt 25892493  T
Q  381 taaaa 385  Q
    |||||    
T  25892494 taaaa 25892498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 202775 - 202676
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||| || ||||||| |||||||||||||| ||| |||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||    
T  202775 atgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaatttc 202676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 15848107 - 15848196
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15848107 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttc 15848196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 6589778 - 6589679
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| |||||||| | |||||||||||||| ||| |||||||||||||| ||||||| |||||||| ||  ||||||||||||||||||||    
T  6589778 atgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaatttc 6589679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 16099076 - 16099163
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| |||||||||||||| |||  |||||||  ||||||||||||||||||| | ||||||||||||||||||||||||    
T  16099076 cttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 16099163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 2318178 - 2318266
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||  |||||||||| ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  2318178 tccttgcaattagg-gtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 2318266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 10712742 - 10712831
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||  || |||||||||| |||  | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  10712742 tccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10712831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 11163432 - 11163343
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||  | ||||||||||||||||||||||||    
T  11163432 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcatttaaaatttc 11163343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 22051400 - 22051313
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||  ||  ||||||||||||||  |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  22051400 cttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 22051313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 389
Target Start/End: Original strand, 36382155 - 36382269
Alignment:
Q  275 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttta 374  Q
    ||||| |||||||  |||| |||  ||||||||||||||  || |||||||||| |||  | |||||| |||||||| |||||||||||| |||||||||    
T  36382155 aaattaggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgttta 36382254  T
Q  375 atcatttaaaatttc 389  Q
    |||||||||||||||    
T  36382255 atcatttaaaatttc 36382269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 36479740 - 36479826
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| ||| |||||||||| ||| ||||||||| ||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  36479740 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcatttaaaatttc 36479826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 45556131 - 45556219
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||||||  || |||||||||| |||  |||||||| |||||||||||||||| || | |||||||||||||||||||||||    
T  45556131 tccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcatttaaaattt 45556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 292 - 387
Target Start/End: Original strand, 3652222 - 3652317
Alignment:
Q  292 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    ||||||||||| |||||| |||  ||||| ||||||| |||||| |||||||||||| |||||| |||||||| ||  ||||||||||||||||||    
T  3652222 gtgttttgtccctgcaatcagggatcattcaaaaattggtcaatataatcgttaatcatggcaaattacccttgcaaagtttaatcatttaaaatt 3652317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 28230158 - 28230059
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| || ||||| | |||||||||||||| |||  |||||||||||||||| |||| |||||||| ||  ||||||||||||||||||||    
T  28230158 atgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaaaatttc 28230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 39936665 - 39936567
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| |||||||||||||  ||||||| || |||  ||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  39936665 atgtgtttcgtccctgcaattaggcgtggtttaaaa-ttggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttc 39936567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 28228679 - 28228777
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||| |||||||||| |||||||||||||| |||  |||||||||||||| |||||| |||| ||| ||  |||||||||||| ||||||    
T  28228679 atgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatcatttgaaattt 28228777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 6657897 - 6657986
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| || ||| |||||||||| |||  |||||||  ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  6657897 tccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcatttaaaatttc 6657986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 14900878 - 14900772
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||| ||| |||||||||| |||  |||||| | |||||||||||||||| ||||  ||   |||||||||    
T  14900878 ggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgtat--gttaatcatt 14900781  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  14900780 taaaatttc 14900772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 33739703 - 33739811
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  33739703 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 33739802  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  33739803 taaaatttc 33739811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 1695740 - 1695847
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  1695740 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 1695839  T
Q  381 taaaattt 388  Q
    ||||||||    
T  1695840 taaaattt 1695847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 3653473 - 3653400
Alignment:
Q  315 gtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||||||| ||||||| |||||||| ||  ||||||||||||||||||||    
T  3653473 gtcatttaaaaattggtccatgtaatcgttaat-ctggcaaattacccttgcaaagtttaatcatttaaaatttc 3653400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 319 - 389
Target Start/End: Original strand, 36755131 - 36755201
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||  |||||| || |||||||  |||||||||||||||||||||||||||||||||||||    
T  36755131 tttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcatttaaaatttc 36755201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 3556418 - 3556329
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||||| |||  |||||||||||||||| ||||  || |||| |||| |||||||||||||||||||    
T  3556418 tccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcatttaaaatttc 3556329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 6588702 - 6588791
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||| ||||||| ||||  || |||| |||| |||||||||||||||||||    
T  6588702 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttc 6588791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 37895720 - 37895667
Alignment:
Q  336 gtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  37895720 gtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaaaatttc 37895667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 39423534 - 39423623
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||| | ||| |||||||||| |||  |||||||| |||| ||||||||||| ||||  |||||||||||||||||||||||    
T  39423534 tccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatttaaaatttc 39423623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 388
Target Start/End: Original strand, 13995668 - 13995780
Alignment:
Q  276 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaa 375  Q
    |||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  ||||    
T  13995668 aattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaa 13995767  T
Q  376 tcatttaaaattt 388  Q
    || ||||||||||    
T  13995768 tcgtttaaaattt 13995780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 13996070 - 13995962
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  13996070 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 13995971  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  13995970 taaaatttc 13995962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 14900496 - 14900572
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 357  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||| |||  |||||| | ||||||| ||||||    
T  14900496 ggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatccttgcaatt 14900572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 33062447 - 33062339
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  33062447 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 33062348  T
Q  381 taaaatttc 389  Q
    || ||||||    
T  33062347 tataatttc 33062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 384
Target Start/End: Original strand, 34447832 - 34447916
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaa 384  Q
    |||||| ||||||| |||||||||||||| |||  | ||||||  ||||||| |||||||||||| ||||||||||| |||||||    
T  34447832 tccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaataatttaaa 34447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 33062050 - 33062157
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  33062050 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 33062149  T
Q  381 taaaattt 388  Q
    ||||||||    
T  33062150 taaaattt 33062157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 43742095 - 43742000
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||| ||| |||| ||||||| |  |||||||||||||| ||| |||||||| ||||||||| ||| |||||||| ||  ||||||||||||||||    
T  43742095 atgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcatttaaaa 43742000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 3555269 - 3555358
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| |||||| ||||  ||| ||| |||| |||| |||||||||||||||||||    
T  3555269 tccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcatttaaaatttc 3555358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 25231253 - 25231168
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||| |||||||||| ||| ||||| ||| ||||||| |||| |||||||| ||   |||||||||||||||||||    
T  25231253 tgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcatttaaaatttc 25231168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 14732470 - 14732410
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 113  Q
    ||||||||||||||| ||||||||||| ||| ||| ||||| |||||| ||||||||||||    
T  14732470 tggtttttaaggggtttttgttcgagctggtatttttgcggtaaccgatttccccttgtat 14732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 388
Target Start/End: Complemental strand, 33740105 - 33739993
Alignment:
Q  276 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaa 375  Q
    |||| |||||| |||||||||| | |||| |||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  ||||    
T  33740105 aattaggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaa 33740006  T
Q  376 tcatttaaaattt 388  Q
    || ||||||||||    
T  33740005 tcgtttaaaattt 33739993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 41248956 - 41248848
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  41248956 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 41248857  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  41248856 taaaatttc 41248848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 17266407 - 17266505
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||| || || ||||  ||||||||||| | ||||||||| ||||| |||||| |||||| ||||| ||   ||||||||||||||||||    
T  17266407 atgtgtttagtccctgtaaatagggatcatttaaaaaatggtcaatgtattcgtttatcctgacaattttcccttccaaaatttaatcatttaaaattt 17266505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 199030 - 199095
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 355  Q
    |||||||| |||| ||||||||||  ||||||||||||||||   |||||||||||||||| ||||    
T  199030 atgtgtttagtccctgcaattagggatcatttaaaaattagttcctgtaatcgttaatccttgcaa 199095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 1696130 - 1696029
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||||||| ||   |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  1696130 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 1696031  T
Q  388 tc 389  Q
    ||    
T  1696030 tc 1696029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 6577674 - 6577601
Alignment:
Q  312 ggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    ||||||||||||||||| |||  ||||||||  ||||||||||| ||||  || ||||||||||| ||||||||    
T  6577674 ggcgtcatttaaaaatttgtccctgtaatcgccaatcctggcaaattactattgcattgtttaattatttaaaa 6577601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 30729640 - 30729729
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||| |||| |||||||||| |||  | || ||| ||||||| |||| || ||||| |||| ||||||| |||||||||||    
T  30729640 tccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgtttaaaatttc 30729729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 25893590 - 25893542
Alignment:
Q  337 taatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||||| ||||| || |||||||||||| ||||||||||||||||||||    
T  25893590 taatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaa 25893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 41248566 - 41248666
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| ||||||||||||  ||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  41248566 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 41248665  T
Q  388 t 388  Q
    |    
T  41248666 t 41248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 41419620 - 41419752
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnct-ccacccaaacttattagtgctccttgc 151  Q
    ||||||||||||||| |||||||||| |||||||  |  ||||||||| ||||||||||||          | |||||| | |||||||||||  |||||    
T  41419620 tggtttttaaggggtttttgttcgagtcggtgttattatggcaaccgatttccccttgtatttgtttttttttccacccgagcttattagtgcatcttgc 41419719  T
Q  152 acgggctaattggttgataatagtttgccaatt 184  Q
    |||||||  |||||| |||||| ||||||||||    
T  41419720 acgggcttgttggttaataatattttgccaatt 41419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 39935465 - 39935563
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||| ||||||||| ||  |||||||||| ||   | ||||||||||||||| ||| ||| |||| ||  ||||||||||||||||||||    
T  39935465 atgtgtttcgtcct-gcaattaggtgtggtttaaaaattggttcttataatcgttaatcctgacaaattatccttgcaaagtttaatcatttaaaatttc 39935563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 13692629 - 13692540
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  13692629 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 13692540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 36755497 - 36755408
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  36755497 tccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 36755408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 44713814 - 44713903
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||| | ||| |||||||||| ||||||||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  44713814 tccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 44713903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 6658256 - 6658168
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||  ||| |||||||||| |||  |||| ||| ||||||| ||||  || ||||||| |  |||||||||||||||||    
T  6658256 tccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaattt 6658168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 38908672 - 38908731
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 113  Q
    ||||||||||||||| ||||||||| ||||||||| || ||| ||||| || |||||||||    
T  38908672 tggtttttaaggggtttttgttcgaaccggtgttt-tgtggctaccgattttcccttgtat 38908731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 39498688 - 39498600
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||||||  || |||||||||| ||| ||||| ||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  39498688 tccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattt 39498600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 282 - 389
Target Start/End: Original strand, 7905244 - 7905351
Alignment:
Q  282 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattt 381  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||| |||||||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcattt 7905343  T
Q  382 aaaatttc 389  Q
    ||||||||    
T  7905344 aaaatttc 7905351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 7160807 - 7160912
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  7160807 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaa 7160906  T
Q  384 aatttc 389  Q
    ||||||    
T  7160907 aatttc 7160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 22502777 - 22502882
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  22502777 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 22502876  T
Q  384 aatttc 389  Q
    ||||||    
T  22502877 aatttc 22502882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 6517503 - 6517610
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||| |||||||||||||||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaattta-ccttgcattgtttaatcatt 6517601  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  6517602 taaaatttc 6517610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 21836035 - 21836139
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  21836035 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 21836133  T
Q  384 aatttc 389  Q
    ||||||    
T  21836134 aatttc 21836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 31407301 - 31407196
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 31407202  T
Q  384 aatttc 389  Q
    ||||||    
T  31407201 aatttc 31407196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 21836456 - 21836348
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||   |||||||| |||||||| |||||||||||| |||||||||||||||    
T  21836456 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 21836357  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  21836356 taaaatttc 21836348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 22503200 - 22503092
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||| |||||||||||||||    
T  22503200 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatcatt 22503101  T
Q  381 taaaatttc 389  Q
    |||| ||||    
T  22503100 taaattttc 22503092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 31406878 - 31406986
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||  |||| |||| ||||||||||    
T  31406878 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatcatt 31406977  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  31406978 taaaatttc 31406986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 7161230 - 7161122
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||  | |||||  |||||||| |||||||||||| |||||||||||||||    
T  7161230 ggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatcatt 7161131  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  7161130 taaaatttc 7161122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 32593490 - 32593598
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||  | |||||| |||||||| |||||||||||| ||||  |||||||||    
T  32593490 ggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgttaatcatt 32593589  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  32593590 taaaatttc 32593598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 15913551 - 15913656
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||  |||||| | |||| |||| ||||||||||| ||||||||||||||||||    
T  15913551 ttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcatttaa 15913650  T
Q  384 aatttc 389  Q
    ||||||    
T  15913651 aatttc 15913656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 30803880 - 30803969
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| |||| ||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30803880 tccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 30803969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 7905666 - 7905561
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||| |||  | |||||| |||| |||||||||||||||| |||||||||||||||| |    
T  7905666 ttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatcatttca 7905567  T
Q  384 aatttc 389  Q
    ||||||    
T  7905566 aatttc 7905561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 382
Target Start/End: Original strand, 10781147 - 10781248
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||  || |||||||| || |||||||||||||||  ||||||||||| ||    
T  10781147 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgcaatcgttattcgtggcaatttacccttgtattgtttaatcttt 10781246  T
Q  381 ta 382  Q
    ||    
T  10781247 ta 10781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 30337468 - 30337557
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  30337468 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttc 30337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 15913974 - 15913866
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||| ||| || |||||||||||| ||| || |||||| |  |||||||||| |||    
T  15913974 ggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattacccctgtattgtttaataatt 15913875  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  15913874 taaaatttc 15913866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 389
Target Start/End: Complemental strand, 14197011 - 14196904
Alignment:
Q  282 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattt 381  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |  ||||||||||    
T  14197011 gcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattt 14196912  T
Q  382 aaaatttc 389  Q
    ||||||||    
T  14196911 aaaatttc 14196904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 12065223 - 12065328
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattg-tttaatcattta 382  Q
    ||||||||| ||||  || |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||  |||| ||||||||||||    
T  12065223 ttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagtc-atgtaatcgctaattctggcaatttacccttgtattgttttaatcattta 12065321  T
Q  383 aaatttc 389  Q
    |||||||    
T  12065322 aaatttc 12065328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 33517553 - 33517642
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| |||||||  || |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  33517553 tccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 33517642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 21628122 - 21628034
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| |||  ||||||||| |||  |||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  21628122 tccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 21628034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 388
Target Start/End: Original strand, 25485956 - 25486060
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |  ||||||||||||    
T  25485956 ttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 25486055  T
Q  384 aattt 388  Q
    |||||    
T  25486056 aattt 25486060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 14196615 - 14196722
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||| ||||||||||| | || || |  |||||||||    
T  14196615 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaatttagctttgcaattgttaatcatt 14196714  T
Q  381 taaaattt 388  Q
    ||||||||    
T  14196715 taaaattt 14196722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 3059276 - 3059365
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||  | ||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3059276 tccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 3059365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 8089466 - 8089551
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||| |||||||||| |||  | |||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  8089466 tgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcatttaaaatttc 8089551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 10781550 - 10781477
Alignment:
Q  315 gtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||||| || ||||||||||||||||| ||||||| |||| ||||||||||| |||||||||||    
T  10781550 gtcatttaaaaattagccattgtaatcgttaatcctgacaatttatccttgcattgtttaattatttaaaattt 10781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 12080655 - 12080744
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| ||||||||||  ||  |||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  12080655 tccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcatttaaaatttc 12080744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 30725781 - 30725867
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||||||||||    
T  30725781 cttgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatttaaaatttc 30725867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 26463202 - 26463287
Alignment:
Q  304 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||| |||||||||| |||  |||| |||||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  26463202 tgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttc 26463287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 17734572 - 17734484
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||| |||||| | ||| ||||||||||  || ||||||||| |||||||  |||||||||||| |||||||||||||||||||||||    
T  17734572 tccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcatttaaaattt 17734484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 28000782 - 28000674
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||| ||||| | ||||||||||||||| |||||||||||| |||  |||||| | |||| ||||||||||| |||| || |  |||||||||    
T  28000782 ggcttattgatctgtttagcccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaatttagccttgcaattgttaatcatt 28000683  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  28000682 taaaatttc 28000674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 362870 - 362977
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| |||| || | || |  |||||| ||    
T  362870 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtt 362969  T
Q  381 taaaattt 388  Q
    ||||||||    
T  362970 taaaattt 362977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 388
Target Start/End: Complemental strand, 28498444 - 28498346
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||| ||||||||||  ||||||||||||| |||  |||||||| ||||||||||||  ||||||  ||  |||||||||||||||||||    
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcatttaaaattt 28498346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 363232 - 363119
Alignment:
Q  276 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaa 375  Q
    |||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  ||||    
T  363232 aatttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaa 363133  T
Q  376 tcatttaaaatttc 389  Q
    || |||||||||||    
T  363132 tcgtttaaaatttc 363119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 11392866 - 11392946
Alignment:
Q  309 ttaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| ||| |||||||||| |||  |||||||| |||||||   ||||||||||| ||||||||||||||||||||||||    
T  11392866 ttaggagtcgtttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttc 11392946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 24210543 - 24210639
Alignment:
Q  293 tgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||| || ||||||| |||||||||||||| |||  |||||| ||||||| | |||| |||||||| ||  ||||||||||||||||||||    
T  24210543 tgtttcgtccctgtaattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaaaatttc 24210639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 25486323 - 25486215
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||| || || |||||||||| || ||||| |||||||||| |||  |||||| | |||||| ||||||||| |||| || |  |||||||||    
T  25486323 ggcttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgttaatcatt 25486224  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  25486223 taaaatttc 25486215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 15859084 - 15859154
Alignment:
Q  41 tttgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 109  Q
    ||||||||||| ||||||||  ||||||| |||||||||||||||||||||  ||||||||| ||||||||    
T  15859084 tttgtttaggggtggttttttaaaggggtttttgttcgagccggtgtttgtttggcaaccgatttcccctt 15859154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 22373085 - 22372978
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||| ||||| ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||  | | || |  |||||||||    
T  22373085 ggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaatcctgcaattgttaatcatt 22372986  T
Q  381 taaaattt 388  Q
    ||||||||    
T  22372985 taaaattt 22372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 30337827 - 30337738
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| |||  |||||||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  30337827 tccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 30337738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 8090336 - 8090248
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||  ||||||| |||| |||||||| ||  |||||||||||||||||||    
T  8090336 tccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcatttaaaattt 8090248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 141159 - 141060
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||||||||||||  || ||||||||||| ||   |||||||||||||||| |||| |||| ||| ||    ||||||||||||||||||    
T  141159 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaaaatttc 141060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 149180 - 149081
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||||||||||||  || ||||||||||| ||   |||||||||||||||| |||| |||| ||| ||    ||||||||||||||||||    
T  149180 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaaaatttc 149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 22367425 - 22367532
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| ||||||  |||| ||||||||||||||  |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  22367425 ggcttattgatgttatttgcccttgcaattaggcagcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 22367524  T
Q  381 taaaattt 388  Q
    ||||||||    
T  22367525 taaaattt 22367532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 388
Target Start/End: Complemental strand, 29810855 - 29810757
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||| ||||||||||  ||||||||||||| |||  |||||||  ||||| ||||||  ||||||  ||  |||||||||||||||||||    
T  29810855 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatcatttaaaattt 29810757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 33647017 - 33647071
Alignment:
Q  335 tgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||| || |||||||||||| |||| |||||||||||||||||||    
T  33647017 tgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatttc 33647071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 15115358 - 15115446
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||   || |||||||||| |||  | |||||||||||||| |||| ||| |||| ||  |||||||||||||||||||    
T  15115358 tccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatttaaaattt 15115446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 15116651 - 15116556
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaa 385  Q
    |||| ||| ||||||||||||||| ||| |||||||||| |||   ||||||| ||||||| ||||  || |||| ||  ||||||||||||||||    
T  15116651 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatttaaaa 15116556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 33647386 - 33647272
Alignment:
Q  274 aaaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttt 373  Q
    |||||| |||||||  |||| |||  |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||    
T  33647386 aaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcatt 33647287  T
Q  374 aatcatttaaaattt 388  Q
    |||||||||||||||    
T  33647286 aatcatttaaaattt 33647272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 681137 - 681048
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  681137 tccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 681048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 3059665 - 3059576
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  3059665 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 3059576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 3176429 - 3176376
Alignment:
Q  308 attaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 361  Q
    |||||| |||||||||||||| |||| ||||||||||||| ||| ||| |||||    
T  3176429 attaggggtcatttaaaaattggtcactgtaatcgttaattctgtcaaattacc 3176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 33517943 - 33517854
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  33517943 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttc 33517854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 139817 - 139875
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcct 350  Q
    ||||||||||| | || ||||||| |||||||||||||| |||| ||||||||||||||||    
T  139817 atgtgttttgttcctgtaattagg-gtcatttaaaaattggtca-tgtaatcgttaatcct 139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 147838 - 147896
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcct 350  Q
    ||||||||||| | || ||||||| |||||||||||||| |||| ||||||||||||||||    
T  147838 atgtgttttgttcctgtaattagg-gtcatttaaaaattggtca-tgtaatcgttaatcct 147896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 6575797 - 6575853
Alignment:
Q  124 tccacccaaacttattagtgctccttgcacgggctaattggttgataatagtttgcc 180  Q
    ||||||| |||||||||||||| ||||||||||||  ||| || |||||| ||||||    
T  6575797 tccacccgaacttattagtgcttcttgcacgggcttgttgattaataatattttgcc 6575853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 28000392 - 28000432
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaatt 328  Q
    |||||||||| | ||||||||||||||| ||||||||||||    
T  28000392 tgatgtgtttagcccttgcaattaggcggcatttaaaaatt 28000432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 17544474 - 17544367
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||    
T  17544474 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 17544375  T
Q  381 taaaattt 388  Q
    ||||||||    
T  17544374 taaaattt 17544367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 8875449 - 8875557
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||    
T  8875449 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatt 8875548  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  8875549 taaaatttc 8875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 33871339 - 33871447
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||| |||| |||||||||||||||| |||||||||||||||    
T  33871339 ggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 33871438  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  33871439 taaaatttc 33871447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 33871764 - 33871656
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||  ||||||||||||||||||||| |||||||||||||||    
T  33871764 ggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgcattgtttaatcatt 33871665  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  33871664 taaaatttc 33871656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 20152781 - 20152889
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  20152781 ggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatt 20152880  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  20152881 taaaatttc 20152889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 20153341 - 20153236
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||| |||||   ||||||||||||| |||||||||||||||    
T  20153341 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatc---gcaatttacccttgcattgtttaatcatt 20153245  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  20153244 taaaatttc 20153236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 22298564 - 22298650
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  22298564 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttacattgtttaatcatttaaaatttc 22298650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 21288083 - 21287975
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||| || ||||||||| ||||| |||||||  |||||| |||||||||||||||    
T  21288083 ggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatcatt 21287984  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  21287983 taaaatttc 21287975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 3529251 - 3529162
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3529251 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttc 3529162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 38475408 - 38475319
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  38475408 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 38475319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 39453319 - 39453408
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  39453319 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 39453408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 389
Target Start/End: Original strand, 5993882 - 5993997
Alignment:
Q  274 aaaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttt 373  Q
    |||||| |||||||  |||| |||  |||||||||||||| ||| |||||||||| |||  |||||||| |||| |||||||||||||||| ||||||||    
T  5993882 aaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgttt 5993981  T
Q  374 aatcatttaaaatttc 389  Q
    ||||||||||||||||    
T  5993982 aatcatttaaaatttc 5993997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 3656844 - 3656743
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||||  |||||||| |||| |||  |||||| |||| |||||||||||||||    
T  3656844 ggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaattctgataatttatccttgcattgtttaatcatt 3656745  T
Q  381 ta 382  Q
    ||    
T  3656744 ta 3656743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 5024427 - 5024338
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||| |||||||| |||||||| ||||||||| || ||||||||||||||||||||||||    
T  5024427 tccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaatttc 5024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 8875687 - 8875618
Alignment:
Q  287 atgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 356  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaat 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 11761768 - 11761857
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  11761768 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 11761857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 16082996 - 16083085
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||||| ||  ||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16082996 tccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttc 16083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 24547534 - 24547445
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  24547534 tccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 24547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 35512167 - 35512256
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| | ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  35512167 tccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 35512256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 6758262 - 6758154
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||| ||||||||||| |||| || |  |||||||||    
T  6758262 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgttaatcatt 6758163  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  6758162 taaaatttc 6758154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 16157264 - 16157176
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  | ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  16157264 tccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattt 16157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 20814544 - 20814456
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||| |||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||    
T  20814544 tccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcatttaaaattt 20814456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 186440 - 186527
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||    
T  186440 cttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcatttaaaatttc 186527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 24141461 - 24141560
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| ||||||||| ||||||||||||||| |||  ||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaatttc 24141560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 13962878 - 13962972
Alignment:
Q  295 ttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| |||||||||||||| ||| |||||||||| |||  |||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13962878 ttttatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttc 13962972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 38442090 - 38442176
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||| || ||||||||||| |||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||    
T  38442090 ttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 38442176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 303 - 388
Target Start/End: Complemental strand, 13362634 - 13362549
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||| ||| |||||||||| |||  |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  13362634 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaattt 13362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 17202418 - 17202507
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||||| ||| |||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||| |||||||||||||    
T  17202418 tccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcatttaaaatttc 17202507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 19892717 - 19892628
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||  ||| |||||||||| |||  ||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  19892717 tccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttc 19892628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 27587167 - 27587256
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  27587167 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcatttaaaatttc 27587256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 20840552 - 20840640
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| ||   |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  20840552 tccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatgatttaaaattt 20840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 28771247 - 28771158
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||| ||| |||||||||| ||| ||||||||| ||||| ||||||||||||| |  |||||||||||||||||||||||    
T  28771247 tccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatttaaaatttc 28771158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 35920588 - 35920504
Alignment:
Q  305 gcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| ||| |||||||||| |||  |||||||| |||||||| ||||||| |||| ||||||||||||||||||||||||    
T  35920588 gcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttc 35920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 41930516 - 41930624
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||  ||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |  |||||||||    
T  41930516 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 41930615  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  41930616 taaaatttc 41930624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 41930910 - 41930806
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    ||||||||||| || ||||||| |||||||||||||||||||||| |||  |||||| | ||||||| |||||||| |||| || |  ||||||||||||    
T  41930910 ttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaa 41930811  T
Q  384 aattt 388  Q
    |||||    
T  41930810 aattt 41930806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 388
Target Start/End: Original strand, 17544077 - 17544155
Alignment:
Q  310 taggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||| |||||||||||||||  |||||| | |||||||| |||||||| ||| |||||||||||||||||||||||    
T  17544077 taggcgtgatttaaaaattagtccctgtaattgctaatcctgacaatttactcttgcattgtttaatcatttaaaattt 17544155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 18247105 - 18247192
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||  ||||||||||||||| |||| |||||||||||| ||||||    
T  18247105 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcatttagaatttc 18247192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 6150473 - 6150562
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||  ||||||||  |||||||| |||||||  ||| ||||||||||||||||||||||||    
T  6150473 tccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcatttaaaatttc 6150562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 14194831 - 14194743
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||| ||| |||||||||| | || ||||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  14194831 tccttgtaattaggggtcgtttaaaaattggcca-tgtaattactaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 14194743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 29646770 - 29646682
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||| ||| ||||||| || ||  ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  29646770 tccttgtaattaggagtcgtttaaaa-ttggtgcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 29646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 32242261 - 32242350
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| ||||||||||  ||  |||||| | ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  32242261 tccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttc 32242350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 383
Target Start/End: Original strand, 40148907 - 40149000
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||| |||| |||||||||   ||||||||||||| ||| ||||||||||||||||| |||| |||||||| ||  ||||||||||||||    
T  40148907 atgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaa 40149000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 383
Target Start/End: Complemental strand, 40150233 - 40150140
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||  |||||||||||||||| | || |||||||| ||  ||||||||||||||    
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatcatttaa 40150140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 31482799 - 31482691
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  31482799 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 31482700  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  31482699 taaaatttc 31482691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 389
Target Start/End: Original strand, 1505960 - 1506075
Alignment:
Q  274 aaaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgttt 373  Q
    |||||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  ||    
T  1505960 aaaattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgtt 1506059  T
Q  374 aatcatttaaaatttc 389  Q
    |||| |||||||||||    
T  1506060 aatcgtttaaaatttc 1506075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 18670221 - 18670307
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||| |||| ||| |||||||||| |||  |||||||| |||||   ||||||||||||| ||||||||||||||||||||||||    
T  18670221 tccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc---gcaatttacccttgcattgtttaatcatttaaaatttc 18670307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 5256421 - 5256332
Alignment:
Q  299 gtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||||||||| ||| |||||||||| |||||||||||   ||||||| |||| ||| |||||||||  ||||||||||||||||||    
T  5256421 gtccttgcaattagg-gtcgtttaaaaattggtcaatgtaatgactaatccttgcaaattagccttacatttgttaatcatttaaaatttc 5256332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 6757883 - 6757972
Alignment:
Q  299 gtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||||||||||||||||||| |||  |||||| | ||||||||||||||||  ||  || |  |||||||||||||||||    
T  6757883 gtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaatttagtctcgcaattgttaatcatttaaaattt 6757972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 11047492 - 11047545
Alignment:
Q  336 gtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11047492 gtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 11047545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 30005175 - 30005260
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||| |||||||||||||||||  || |||| | |||||||| ||||||||  || |||| ||||||||||||||||||    
T  30005175 ttgcaattaggtgtcatttaaaaattagttcatataattgctaatcctgacaatttacatttgcattatttaatcatttaaaattt 30005260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 31482402 - 31482509
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| ||    
T  31482402 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 31482501  T
Q  381 taaaattt 388  Q
    ||||||||    
T  31482502 taaaattt 31482509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 21287797 - 21287851
Alignment:
Q  335 tgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| |||| ||||||||||||||||  |||||||||||||||||||||||    
T  21287797 tgtaatcgctaattctggcaatttacccttgtattgtttaatcatttaaaatttc 21287851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 297404 - 297303
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||| ||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  ||||||||||||||||    
T  297404 tgatgtgtttagcccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 297305  T
Q  388 tc 389  Q
    ||    
T  297304 tc 297303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 2292149 - 2292222
Alignment:
Q  38 tcttttgtttagggttggtttt-taaggggtatttgttcgagccggtg-tttgtgcggcaaccgacttcccctt 109  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| |||||  ||||||||| ||||||||    
T  2292149 tcttttgtttaggggtggttttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttcccctt 2292222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 6150829 - 6150740
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||||| | ||||  || |||| || |  ||||||||||||||||||    
T  6150829 tccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcatttaaaatttc 6150740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 297009 - 297085
Alignment:
Q  276 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctgg 352  Q
    |||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | |||||||||    
T  297009 aattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg 297085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 1506357 - 1506257
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  1506357 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 1506258  T
Q  388 t 388  Q
    |    
T  1506257 t 1506257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 23173116 - 23172984
Alignment:
Q  41 tttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttatta 140  Q
    |||||||| || ||||||||||||||  ||||||||||||||||||| |  |||||| || ||| |||||| ||         ||||||| | |||||||    
T  23173116 tttgtttatgggtggtttttaagggggttttgttcgagccggtgtttatagggcaactgatttctccttgtttgtattttttttccacccgagcttatta 23173017  T
Q  141 gtgctccttgcacgggctaattggttgataata 173  Q
    ||||| ||||||||||||  |||||| ||||||    
T  23173016 gtgcttcttgcacgggcttgttggttaataata 23172984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 9931932 - 9931877
Alignment:
Q  53 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccct 108  Q
    |||||||| ||| || ||||||||||| |||||||||||||||||||| |||||||    
T  9931932 tggtttttgaggtgtttttgttcgagctggtgtttgtgcggcaaccgatttcccct 9931877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 21265551 - 21265461
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattt-acccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||| | ||| |||||||||| ||   |||||||| ||||| ||||||||| |||||| ||||||||||| ||||||||||||    
T  21265551 tccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaattatttaaaatttc 21265461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 8322467 - 8322512
Alignment:
Q  344 taatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||    
T  8322467 taatcttggcaatttatccttgcattgtttaatcatttaaaatttc 8322512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 19892327 - 19892416
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||||||||||| ||||  || ||||  | |  ||||||||||||||||||    
T  19892327 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcatttaaaatttc 19892416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 11740706 - 11740794
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| ||||||||||  || || || ||| ||||||| ||||  || |||| |||| ||||||||||||||||||    
T  11740706 tccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcatttaaaattt 11740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 370
Target Start/End: Complemental strand, 24205016 - 24204937
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattg 370  Q
    |||| |||| || ||||||||||| ||| ||||||||||  ||| |||||||| |||||||| |||||||||||| |||||    
T  24205016 atgtattttatctttgcaattaggggtcgtttaaaaattgatca-tgtaatcgctaatcctgacaatttacccttgcattg 24204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 389
Target Start/End: Complemental strand, 28269744 - 28269708
Alignment:
Q  353 caatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28269744 caatttacccttgcattgtttaatcatttaaaatttc 28269708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 16156876 - 16156963
Alignment:
Q  302 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||| ||| |||||||||| ||| ||||| ||||||||||| ||||  ||  ||| || |  ||||||||||||||||||    
T  16156876 cttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttc 16156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 29646362 - 29646469
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||  |||| |||| |||||| ||||||| ||| |||||||||| ||| ||||| ||| ||||||| ||||  || |||| || |  |||||||||    
T  29646362 ggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatcatt 29646461  T
Q  381 taaaattt 388  Q
    ||||||||    
T  29646462 taaaattt 29646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 389
Target Start/End: Original strand, 35920266 - 35920336
Alignment:
Q  319 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||| ||||||||| ||| ||||||| |||| ||| |||| || |  ||||||||||||||||||    
T  35920266 tttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcatttaaaatttc 35920336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 8322813 - 8322724
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||   ||| ||||||||||| ||||  || |||| || |  ||||||||||||||||||    
T  8322813 tccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 8322724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 11741926 - 11741837
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||| ||||||| |||||||||||||  |||  |||| ||| ||||| | ||||  || |||| |||| |||||||||||||||||||    
T  11741926 tccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcatttaaaatttc 11741837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 25539813 - 25539881
Alignment:
Q  44 gtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 113  Q
    |||| ||| ||||||||||||||| ||||||||||||| ||||||   ||||||||| |||| |||||||    
T  25539813 gttttggggtggtttttaaggggtttttgttcgagccgatgtttg-atggcaaccgatttcctcttgtat 25539881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 39453708 - 39453619
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| |||  |||| ||| ||||| | ||||  || |||| || |  ||||||||||||||||||    
T  39453708 tccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttc 39453619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 11762126 - 11762038
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  11762126 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattt 11762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 19518016 - 19517928
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||  |||||||||||||| ||||| ||| ||||| | ||||  || |||| || |  |||||||||||||||||    
T  19518016 tccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaattt 19517928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 27587524 - 27587436
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  27587524 tccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattt 27587436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 28770888 - 28770976
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || ||||||| |  || ||||||||||||||    
T  28770888 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattgatcatttaaaattt 28770976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 920 - 1028
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  920 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 1019  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  1020 taaaatttc 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 1261 - 1211
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagt 331  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1261 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 222215 - 222107
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| |||||||||||||||    
T  222215 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 222116  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  222115 taaaatttc 222107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 221794 - 221898
Alignment:
Q  284 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 383  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  221794 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 221892  T
Q  384 aatttc 389  Q
    ||||||    
T  221893 aatttc 221898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 2395 - 2501
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| ||  |||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  2395 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 2494  T
Q  383 aaatttc 389  Q
    |||||||    
T  2495 aaatttc 2501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 12204 - 12098
Alignment:
Q  283 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 382  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||| ||   ||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 12105  T
Q  383 aaatttc 389  Q
    |||||||    
T  12104 aaatttc 12098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 68984 - 69073
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| |||||||||||||| |||  |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  68984 tccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 69073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 21009 - 21116
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| |||||||| |||| || |  |||||||||    
T  21009 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatt 21108  T
Q  381 taaaattt 388  Q
    ||||||||    
T  21109 taaaattt 21116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 21366 - 21260
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||||||||||| || ||||||||||||||  ||| |||||||||| |||  |||||| | ||||| ||||||||||  ||| || |  |||||||||    
T  21366 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaatttagtcttgcaattgttaatcatt 21267  T
Q  381 taaaatt 387  Q
    |||||||    
T  21266 taaaatt 21260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 1788 - 1877
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| || ||||||| |||  |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1788 tccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 1877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 37972 - 37883
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| ||||||||||||  |||||||||||||||||||||||    
T  37972 tccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttc 37883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 239970 - 239871
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||| ||||||||| ||||| |||||||||||||| ||   |||||||| |||||||||||| |||||||| ||  ||||||||||||||||||||    
T  239970 atgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttc 239871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 139691 - 139780
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| |  |||| ||||||||||||||||||    
T  139691 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcatttaaaatttc 139780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 6397 - 6298
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    ||||||||  |||||| ||||||| |||| ||||||||| |||  | |||||| ||||||| |||| |||||||| || |||||||||||||||||||||    
T  6397 atgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaatttc 6298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 141991 - 141883
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  ||  |||||| | ||||||||||| |||| || | || |  |||||||||    
T  141991 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 141892  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  141891 taaaatttc 141883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 141601 - 141701
Alignment:
Q  288 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatt 387  Q
    |||||||||| | |||||||||||| || |||||||||||| |||  |||||| | ||||||||||| |||| || | || |  |||||| |||||||||    
T  141601 tgatgtgtttagcccttgcaattagacggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 141700  T
Q  388 t 388  Q
    |    
T  141701 t 141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 19866 - 19965
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||| ||| ||||||||||||| | ||| |||||||||| |||  ||| |||| ||||||| |||| ||||| || |||| |||||||||||||||||||    
T  19866 atgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcatttaaaatttc 19965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 23240 - 23338
Alignment:
Q  290 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    |||||||| |||| ||||| || | |||||||||||||| ||| ||||| | |||||||||| |||| || |||| ||  |||||||||||||||||||    
T  23240 atgtgtttcgtccctgcaaatatgagtcatttaaaaattggtctatgtatttgttaatcctgtcaatctatccttccaaagtttaatcatttaaaattt 23338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 1233 - 1341
Alignment:
Q  281 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatt 380  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | |||||||| || |||| || | || |  |||||||||    
T  1233 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 1332  T
Q  381 taaaatttc 389  Q
    |||||||||    
T  1333 taaaatttc 1341  T

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Target: scaffold0075 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 14799 - 14737
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 362  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| |||||||||||||||||||    
T  14799 tccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctggcaatttaccc 14737  T

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Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 14451 - 14536
Alignment:
Q  303 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaattt 388  Q
    ||||||||||| ||| |||||||||||||| || || ||| ||||||| ||||  || |||| || |  |||||||||||||||||    
T  14451 ttgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattt 14536  T

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Target: scaffold0707 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 6488 - 6399
Alignment:
Q  300 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 389  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||  || |||| || |  ||||||||||||||||||    
T  6488 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttc 6399  T

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