View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8253_high_18 (Length: 317)

Name: NF8253_high_18
Description: NF8253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8253_high_18
NF8253_high_18
[»] chr6 (11 HSPs)
chr6 (87-154)||(31095128-31095195)
chr6 (157-197)||(31095240-31095280)
chr6 (2-32)||(3849101-3849131)
chr6 (2-32)||(17124158-17124188)
chr6 (2-32)||(22050085-22050115)
chr6 (2-32)||(22784843-22784873)
chr6 (2-32)||(24663415-24663445)
chr6 (2-32)||(31244924-31244954)
chr6 (2-32)||(32359610-32359640)
chr6 (2-32)||(33260736-33260766)
chr6 (4-32)||(34378895-34378923)
[»] scaffold0202 (3 HSPs)
scaffold0202 (90-153)||(3852-3915)
scaffold0202 (242-272)||(4085-4115)
scaffold0202 (157-201)||(3962-4007)
[»] chr7 (16 HSPs)
chr7 (1-32)||(33921950-33921981)
chr7 (1-32)||(41891306-41891337)
chr7 (2-32)||(2408838-2408868)
chr7 (2-32)||(6799159-6799189)
chr7 (2-32)||(8966077-8966107)
chr7 (2-32)||(17354203-17354233)
chr7 (2-32)||(18470343-18470373)
chr7 (2-32)||(22382249-22382279)
chr7 (2-32)||(26632357-26632387)
chr7 (2-32)||(29497711-29497741)
chr7 (2-32)||(31430595-31430625)
chr7 (2-32)||(33100010-33100040)
chr7 (2-32)||(33173843-33173873)
chr7 (2-30)||(24283620-24283648)
chr7 (4-32)||(30866915-30866943)
chr7 (4-32)||(34368838-34368866)
[»] scaffold1213 (1 HSPs)
scaffold1213 (2-32)||(142-172)
[»] scaffold0886 (1 HSPs)
scaffold0886 (2-32)||(4552-4582)
[»] scaffold0831 (1 HSPs)
scaffold0831 (2-32)||(2843-2873)
[»] scaffold0024 (1 HSPs)
scaffold0024 (2-32)||(49183-49213)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-32)||(147303-147333)
[»] chr8 (22 HSPs)
chr8 (2-32)||(167651-167681)
chr8 (2-32)||(2456284-2456314)
chr8 (2-32)||(3720716-3720746)
chr8 (2-32)||(8672338-8672368)
chr8 (2-32)||(9954685-9954715)
chr8 (2-32)||(11707659-11707689)
chr8 (2-32)||(13327815-13327845)
chr8 (2-32)||(17718539-17718569)
chr8 (2-32)||(23429945-23429975)
chr8 (2-32)||(34046887-34046917)
chr8 (2-32)||(34981865-34981895)
chr8 (2-32)||(35052089-35052119)
chr8 (2-32)||(38482966-38482996)
chr8 (2-32)||(41890558-41890588)
chr8 (2-32)||(43642163-43642193)
chr8 (2-32)||(45281551-45281581)
chr8 (2-31)||(33314581-33314610)
chr8 (4-32)||(2335469-2335497)
chr8 (4-32)||(6750651-6750679)
chr8 (4-32)||(6757442-6757470)
chr8 (4-32)||(8731003-8731031)
chr8 (4-32)||(35296080-35296108)
[»] chr5 (23 HSPs)
chr5 (2-32)||(1088104-1088134)
chr5 (2-32)||(4175651-4175681)
chr5 (2-32)||(4694782-4694812)
chr5 (2-32)||(4985346-4985376)
chr5 (2-32)||(9076089-9076119)
chr5 (2-32)||(12664876-12664906)
chr5 (2-32)||(18794801-18794831)
chr5 (2-32)||(21150510-21150540)
chr5 (2-32)||(21157651-21157681)
chr5 (2-32)||(24075009-24075039)
chr5 (2-32)||(31985221-31985251)
chr5 (2-32)||(32389004-32389034)
chr5 (2-32)||(36239476-36239506)
chr5 (2-32)||(38017448-38017478)
chr5 (2-32)||(38363209-38363239)
chr5 (2-32)||(42911568-42911598)
chr5 (2-30)||(6689619-6689647)
chr5 (4-32)||(12784615-12784643)
chr5 (4-32)||(21606431-21606459)
chr5 (4-32)||(28463558-28463586)
chr5 (4-32)||(32440085-32440113)
chr5 (4-32)||(38297789-38297817)
chr5 (4-32)||(42394301-42394329)
[»] chr4 (27 HSPs)
chr4 (2-32)||(3436242-3436272)
chr4 (2-32)||(12252139-12252169)
chr4 (2-32)||(13629368-13629398)
chr4 (2-32)||(16464957-16464987)
chr4 (2-32)||(19527383-19527413)
chr4 (2-32)||(21044922-21044952)
chr4 (2-32)||(22828576-22828606)
chr4 (2-32)||(23623670-23623700)
chr4 (2-32)||(26620526-26620556)
chr4 (2-32)||(27492398-27492428)
chr4 (2-32)||(30939194-30939224)
chr4 (2-32)||(31862161-31862191)
chr4 (2-32)||(33755257-33755287)
chr4 (2-32)||(39671364-39671394)
chr4 (2-32)||(42645346-42645376)
chr4 (2-32)||(44014088-44014118)
chr4 (2-32)||(46871960-46871990)
chr4 (2-32)||(48782239-48782269)
chr4 (2-32)||(52677320-52677350)
chr4 (2-32)||(53599961-53599991)
chr4 (2-32)||(54029137-54029167)
chr4 (2-32)||(55147236-55147266)
chr4 (2-32)||(56576278-56576308)
chr4 (2-31)||(23237667-23237696)
chr4 (4-32)||(37394336-37394364)
chr4 (4-32)||(52257968-52257996)
chr4 (4-32)||(55935146-55935174)
[»] chr3 (22 HSPs)
chr3 (2-32)||(790586-790616)
chr3 (2-32)||(2154219-2154249)
chr3 (2-32)||(2642746-2642776)
chr3 (2-32)||(20105228-20105258)
chr3 (2-32)||(20848899-20848929)
chr3 (2-32)||(23771323-23771353)
chr3 (2-32)||(33874726-33874756)
chr3 (2-32)||(42515352-42515382)
chr3 (2-32)||(43554426-43554456)
chr3 (2-32)||(43775570-43775600)
chr3 (2-32)||(47104335-47104365)
chr3 (2-32)||(48152021-48152051)
chr3 (2-32)||(48214103-48214133)
chr3 (2-32)||(51219264-51219294)
chr3 (2-32)||(53745461-53745491)
chr3 (2-32)||(54106299-54106329)
chr3 (4-32)||(27028197-27028225)
chr3 (4-32)||(27039788-27039816)
chr3 (4-32)||(50091981-50092009)
chr3 (4-32)||(52173783-52173811)
chr3 (4-32)||(52175756-52175784)
chr3 (4-32)||(54334365-54334393)
[»] chr2 (20 HSPs)
chr2 (2-32)||(479150-479180)
chr2 (2-32)||(3363620-3363650)
chr2 (2-32)||(10812235-10812265)
chr2 (2-32)||(11222493-11222523)
chr2 (2-32)||(11560224-11560254)
chr2 (2-32)||(14541367-14541397)
chr2 (2-32)||(15677468-15677498)
chr2 (2-32)||(26342616-26342646)
chr2 (2-32)||(28145749-28145779)
chr2 (2-32)||(30544556-30544586)
chr2 (2-32)||(32854957-32854987)
chr2 (2-32)||(37116770-37116800)
chr2 (2-32)||(41885661-41885691)
chr2 (2-32)||(43077328-43077358)
chr2 (2-32)||(44360470-44360500)
chr2 (2-31)||(36375608-36375637)
chr2 (4-32)||(1395601-1395629)
chr2 (4-32)||(2012897-2012925)
chr2 (4-32)||(6013511-6013539)
chr2 (4-32)||(31025119-31025147)
[»] chr1 (16 HSPs)
chr1 (2-32)||(7782987-7783017)
chr1 (2-32)||(8464620-8464650)
chr1 (2-32)||(10675938-10675968)
chr1 (2-32)||(21927867-21927897)
chr1 (2-32)||(28679057-28679087)
chr1 (2-32)||(30686447-30686477)
chr1 (2-32)||(31588910-31588940)
chr1 (2-32)||(32994640-32994670)
chr1 (2-32)||(35531466-35531496)
chr1 (2-32)||(37437224-37437254)
chr1 (2-32)||(45226748-45226778)
chr1 (4-32)||(9362009-9362037)
chr1 (4-32)||(15660623-15660651)
chr1 (2-30)||(19093306-19093334)
chr1 (4-32)||(38597627-38597655)
chr1 (4-32)||(40926916-40926944)


Alignment Details
Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 31095128 - 31095195
Alignment:
Q  87 tagttgacaaaagcttcttggagcatgtggttgagatatgagatgcaagaacatgtattcttttttgt 154  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31095128 tagttgacaagagcttcttggagcatgtggttgagatatgagatgcaagaacttgtattcttttttgt 31095195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 31095240 - 31095280
Alignment:
Q  157 gccacaaattcatcgtacggactgatgagaagagtctgaag 197  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  31095240 gccacaaattcatcgtccggactgatgagaagagtctgaag 31095280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 3849131 - 3849101
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  3849131 aatgttgcattgaactttgaaagtgacagtt 3849101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 17124158 - 17124188
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  17124158 aatgttgcattgaactttgaaagtgacagtt 17124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 22050115 - 22050085
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  22050115 aatgttgcattgaactttgaaagtgacagtt 22050085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 22784843 - 22784873
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  22784843 aatgttgcattgaactttgaaagtgacagtt 22784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 24663445 - 24663415
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  24663445 aatgttgcattgaactttgaaagtgacagtt 24663415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 31244924 - 31244954
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  31244924 aatgttgcattgaactttgaaagtgacagtt 31244954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 32359610 - 32359640
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  32359610 aatgttgcattgaactttgaaagtgacagtt 32359640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 33260766 - 33260736
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  33260766 aatgttgcattgaactttgaaagtgacagtt 33260736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 34378923 - 34378895
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  34378923 tgttgcattgaactttgaaagtgacagtt 34378895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 3852 - 3915
Alignment:
Q  90 ttgacaaaagcttcttggagcatgtggttgagatatgagatgcaagaacatgtattcttttttg 153  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  3852 ttgacaagagcttcttggagcatgtggttgagatatgagaggaaagaacttgtattcttttttg 3915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 272
Target Start/End: Original strand, 4085 - 4115
Alignment:
Q  242 aatataaatctggcaaagacaatacaacatc 272  Q
    |||||||||||||||||||||||||||||||    
T  4085 aatataaatctggcaaagacaatacaacatc 4115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3962 - 4007
Alignment:
Q  157 gccacaaattcatcgtacggact-gatgagaagagtctgaagacac 201  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||    
T  3962 gccacaaattcatcgtccggatttgatgagaagagtctgaagacac 4007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000007; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33921950 - 33921981
Alignment:
Q  1 caatgttgcattgaactttgaaagtgacagtt 32  Q
    ||||||||||||||||||||||||||||||||    
T  33921950 caatgttgcattgaactttgaaagtgacagtt 33921981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 41891337 - 41891306
Alignment:
Q  1 caatgttgcattgaactttgaaagtgacagtt 32  Q
    ||||||||||||||||||||||||||||||||    
T  41891337 caatgttgcattgaactttgaaagtgacagtt 41891306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 2408838 - 2408868
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  2408838 aatgttgcattgaactttgaaagtgacagtt 2408868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 6799189 - 6799159
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  6799189 aatgttgcattgaactttgaaagtgacagtt 6799159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 8966077 - 8966107
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  8966077 aatgttgcattgaactttgaaagtgacagtt 8966107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 17354203 - 17354233
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  17354203 aatgttgcattgaactttgaaagtgacagtt 17354233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 18470373 - 18470343
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  18470373 aatgttgcattgaactttgaaagtgacagtt 18470343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 22382249 - 22382279
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  22382249 aatgttgcattgaactttgaaagtgacagtt 22382279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 26632357 - 26632387
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  26632357 aatgttgcattgaactttgaaagtgacagtt 26632387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 29497711 - 29497741
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  29497711 aatgttgcattgaactttgaaagtgacagtt 29497741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 31430625 - 31430595
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  31430625 aatgttgcattgaactttgaaagtgacagtt 31430595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 33100010 - 33100040
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  33100010 aatgttgcattgaactttgaaagtgacagtt 33100040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 33173873 - 33173843
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  33173873 aatgttgcattgaactttgaaagtgacagtt 33173843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 24283648 - 24283620
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacag 30  Q
    |||||||||||||||||||||||||||||    
T  24283648 aatgttgcattgaactttgaaagtgacag 24283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 30866915 - 30866943
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  30866915 tgttgcattgaactttgaaagtgacagtt 30866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 34368838 - 34368866
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  34368838 tgttgcattgaactttgaaagtgacagtt 34368866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 142 - 172
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  142 aatgttgcattgaactttgaaagtgacagtt 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 4582 - 4552
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  4582 aatgttgcattgaactttgaaagtgacagtt 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 2873 - 2843
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  2873 aatgttgcattgaactttgaaagtgacagtt 2843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 49213 - 49183
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  49213 aatgttgcattgaactttgaaagtgacagtt 49183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 147303 - 147333
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  147303 aatgttgcattgaactttgaaagtgacagtt 147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 167651 - 167681
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  167651 aatgttgcattgaactttgaaagtgacagtt 167681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 2456284 - 2456314
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  2456284 aatgttgcattgaactttgaaagtgacagtt 2456314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 3720746 - 3720716
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  3720746 aatgttgcattgaactttgaaagtgacagtt 3720716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 8672368 - 8672338
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  8672368 aatgttgcattgaactttgaaagtgacagtt 8672338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 9954715 - 9954685
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  9954715 aatgttgcattgaactttgaaagtgacagtt 9954685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 11707659 - 11707689
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  11707659 aatgttgcattgaactttgaaagtgacagtt 11707689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 13327845 - 13327815
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  13327845 aatgttgcattgaactttgaaagtgacagtt 13327815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 17718569 - 17718539
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  17718569 aatgttgcattgaactttgaaagtgacagtt 17718539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 23429975 - 23429945
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  23429975 aatgttgcattgaactttgaaagtgacagtt 23429945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 34046917 - 34046887
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  34046917 aatgttgcattgaactttgaaagtgacagtt 34046887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 34981895 - 34981865
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  34981895 aatgttgcattgaactttgaaagtgacagtt 34981865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 35052119 - 35052089
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  35052119 aatgttgcattgaactttgaaagtgacagtt 35052089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 38482966 - 38482996
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  38482966 aatgttgcattgaactttgaaagtgacagtt 38482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 41890588 - 41890558
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  41890588 aatgttgcattgaactttgaaagtgacagtt 41890558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 43642163 - 43642193
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  43642163 aatgttgcattgaactttgaaagtgacagtt 43642193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 45281551 - 45281581
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  45281551 aatgttgcattgaactttgaaagtgacagtt 45281581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 33314610 - 33314581
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagt 31  Q
    ||||||||||||||||||||||||||||||    
T  33314610 aatgttgcattgaactttgaaagtgacagt 33314581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 2335497 - 2335469
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  2335497 tgttgcattgaactttgaaagtgacagtt 2335469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 6750679 - 6750651
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  6750679 tgttgcattgaactttgaaagtgacagtt 6750651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 6757470 - 6757442
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  6757470 tgttgcattgaactttgaaagtgacagtt 6757442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 8731003 - 8731031
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  8731003 tgttgcattgaactttgaaagtgacagtt 8731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 35296108 - 35296080
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  35296108 tgttgcattgaactttgaaagtgacagtt 35296080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 1088104 - 1088134
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  1088104 aatgttgcattgaactttgaaagtgacagtt 1088134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 4175651 - 4175681
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  4175651 aatgttgcattgaactttgaaagtgacagtt 4175681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 4694812 - 4694782
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  4694812 aatgttgcattgaactttgaaagtgacagtt 4694782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 4985346 - 4985376
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  4985346 aatgttgcattgaactttgaaagtgacagtt 4985376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 9076119 - 9076089
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  9076119 aatgttgcattgaactttgaaagtgacagtt 9076089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 12664906 - 12664876
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  12664906 aatgttgcattgaactttgaaagtgacagtt 12664876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 18794831 - 18794801
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  18794831 aatgttgcattgaactttgaaagtgacagtt 18794801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 21150540 - 21150510
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  21150540 aatgttgcattgaactttgaaagtgacagtt 21150510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 21157681 - 21157651
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  21157681 aatgttgcattgaactttgaaagtgacagtt 21157651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 24075009 - 24075039
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  24075009 aatgttgcattgaactttgaaagtgacagtt 24075039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 31985221 - 31985251
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  31985221 aatgttgcattgaactttgaaagtgacagtt 31985251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 32389034 - 32389004
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  32389034 aatgttgcattgaactttgaaagtgacagtt 32389004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 36239506 - 36239476
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  36239506 aatgttgcattgaactttgaaagtgacagtt 36239476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 38017448 - 38017478
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  38017448 aatgttgcattgaactttgaaagtgacagtt 38017478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 38363239 - 38363209
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  38363239 aatgttgcattgaactttgaaagtgacagtt 38363209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 42911598 - 42911568
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  42911598 aatgttgcattgaactttgaaagtgacagtt 42911568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 6689647 - 6689619
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacag 30  Q
    |||||||||||||||||||||||||||||    
T  6689647 aatgttgcattgaactttgaaagtgacag 6689619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 12784615 - 12784643
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  12784615 tgttgcattgaactttgaaagtgacagtt 12784643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 21606431 - 21606459
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  21606431 tgttgcattgaactttgaaagtgacagtt 21606459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 28463558 - 28463586
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  28463558 tgttgcattgaactttgaaagtgacagtt 28463586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 32440085 - 32440113
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  32440085 tgttgcattgaactttgaaagtgacagtt 32440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 38297789 - 38297817
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  38297789 tgttgcattgaactttgaaagtgacagtt 38297817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 42394301 - 42394329
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  42394301 tgttgcattgaactttgaaagtgacagtt 42394329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 3436242 - 3436272
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  3436242 aatgttgcattgaactttgaaagtgacagtt 3436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 12252169 - 12252139
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  12252169 aatgttgcattgaactttgaaagtgacagtt 12252139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 13629368 - 13629398
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  13629368 aatgttgcattgaactttgaaagtgacagtt 13629398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 16464957 - 16464987
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  16464957 aatgttgcattgaactttgaaagtgacagtt 16464987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 19527383 - 19527413
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  19527383 aatgttgcattgaactttgaaagtgacagtt 19527413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 21044922 - 21044952
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  21044922 aatgttgcattgaactttgaaagtgacagtt 21044952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 22828576 - 22828606
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  22828576 aatgttgcattgaactttgaaagtgacagtt 22828606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 23623670 - 23623700
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  23623670 aatgttgcattgaactttgaaagtgacagtt 23623700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 26620526 - 26620556
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  26620526 aatgttgcattgaactttgaaagtgacagtt 26620556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 27492428 - 27492398
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  27492428 aatgttgcattgaactttgaaagtgacagtt 27492398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 30939224 - 30939194
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  30939224 aatgttgcattgaactttgaaagtgacagtt 30939194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 31862161 - 31862191
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  31862161 aatgttgcattgaactttgaaagtgacagtt 31862191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 33755257 - 33755287
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  33755257 aatgttgcattgaactttgaaagtgacagtt 33755287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 39671394 - 39671364
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  39671394 aatgttgcattgaactttgaaagtgacagtt 39671364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 42645376 - 42645346
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  42645376 aatgttgcattgaactttgaaagtgacagtt 42645346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 44014088 - 44014118
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  44014088 aatgttgcattgaactttgaaagtgacagtt 44014118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 46871990 - 46871960
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  46871990 aatgttgcattgaactttgaaagtgacagtt 46871960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 48782269 - 48782239
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  48782269 aatgttgcattgaactttgaaagtgacagtt 48782239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 52677320 - 52677350
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  52677320 aatgttgcattgaactttgaaagtgacagtt 52677350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 53599961 - 53599991
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  53599961 aatgttgcattgaactttgaaagtgacagtt 53599991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 54029167 - 54029137
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  54029167 aatgttgcattgaactttgaaagtgacagtt 54029137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 55147236 - 55147266
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  55147236 aatgttgcattgaactttgaaagtgacagtt 55147266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 56576278 - 56576308
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  56576278 aatgttgcattgaactttgaaagtgacagtt 56576308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 23237696 - 23237667
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagt 31  Q
    ||||||||||||||||||||||||||||||    
T  23237696 aatgttgcattgaactttgaaagtgacagt 23237667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 37394336 - 37394364
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  37394336 tgttgcattgaactttgaaagtgacagtt 37394364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 52257968 - 52257996
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  52257968 tgttgcattgaactttgaaagtgacagtt 52257996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 55935174 - 55935146
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  55935174 tgttgcattgaactttgaaagtgacagtt 55935146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 790616 - 790586
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  790616 aatgttgcattgaactttgaaagtgacagtt 790586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 2154219 - 2154249
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  2154219 aatgttgcattgaactttgaaagtgacagtt 2154249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 2642776 - 2642746
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  2642776 aatgttgcattgaactttgaaagtgacagtt 2642746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 20105258 - 20105228
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  20105258 aatgttgcattgaactttgaaagtgacagtt 20105228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 20848899 - 20848929
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  20848899 aatgttgcattgaactttgaaagtgacagtt 20848929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 23771353 - 23771323
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  23771353 aatgttgcattgaactttgaaagtgacagtt 23771323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 33874726 - 33874756
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  33874726 aatgttgcattgaactttgaaagtgacagtt 33874756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 42515352 - 42515382
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  42515352 aatgttgcattgaactttgaaagtgacagtt 42515382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 43554456 - 43554426
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  43554456 aatgttgcattgaactttgaaagtgacagtt 43554426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 43775570 - 43775600
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  43775570 aatgttgcattgaactttgaaagtgacagtt 43775600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 47104335 - 47104365
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  47104335 aatgttgcattgaactttgaaagtgacagtt 47104365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 48152051 - 48152021
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  48152051 aatgttgcattgaactttgaaagtgacagtt 48152021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 48214133 - 48214103
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  48214133 aatgttgcattgaactttgaaagtgacagtt 48214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 51219264 - 51219294
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  51219264 aatgttgcattgaactttgaaagtgacagtt 51219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 53745461 - 53745491
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  53745461 aatgttgcattgaactttgaaagtgacagtt 53745491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 54106329 - 54106299
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  54106329 aatgttgcattgaactttgaaagtgacagtt 54106299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 27028197 - 27028225
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  27028197 tgttgcattgaactttgaaagtgacagtt 27028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 27039788 - 27039816
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  27039788 tgttgcattgaactttgaaagtgacagtt 27039816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 50092009 - 50091981
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  50092009 tgttgcattgaactttgaaagtgacagtt 50091981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 52173811 - 52173783
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  52173811 tgttgcattgaactttgaaagtgacagtt 52173783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 52175784 - 52175756
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  52175784 tgttgcattgaactttgaaagtgacagtt 52175756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 54334365 - 54334393
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  54334365 tgttgcattgaactttgaaagtgacagtt 54334393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 479150 - 479180
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  479150 aatgttgcattgaactttgaaagtgacagtt 479180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 3363650 - 3363620
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  3363650 aatgttgcattgaactttgaaagtgacagtt 3363620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 10812265 - 10812235
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  10812265 aatgttgcattgaactttgaaagtgacagtt 10812235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 11222493 - 11222523
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  11222493 aatgttgcattgaactttgaaagtgacagtt 11222523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 11560224 - 11560254
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  11560224 aatgttgcattgaactttgaaagtgacagtt 11560254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 14541397 - 14541367
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  14541397 aatgttgcattgaactttgaaagtgacagtt 14541367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 15677468 - 15677498
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  15677468 aatgttgcattgaactttgaaagtgacagtt 15677498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 26342646 - 26342616
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  26342646 aatgttgcattgaactttgaaagtgacagtt 26342616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 28145749 - 28145779
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  28145749 aatgttgcattgaactttgaaagtgacagtt 28145779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 30544586 - 30544556
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  30544586 aatgttgcattgaactttgaaagtgacagtt 30544556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 32854957 - 32854987
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  32854957 aatgttgcattgaactttgaaagtgacagtt 32854987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 37116770 - 37116800
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  37116770 aatgttgcattgaactttgaaagtgacagtt 37116800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 41885691 - 41885661
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  41885691 aatgttgcattgaactttgaaagtgacagtt 41885661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 43077358 - 43077328
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  43077358 aatgttgcattgaactttgaaagtgacagtt 43077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 44360500 - 44360470
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  44360500 aatgttgcattgaactttgaaagtgacagtt 44360470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 36375637 - 36375608
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagt 31  Q
    ||||||||||||||||||||||||||||||    
T  36375637 aatgttgcattgaactttgaaagtgacagt 36375608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 1395629 - 1395601
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  1395629 tgttgcattgaactttgaaagtgacagtt 1395601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 2012925 - 2012897
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  2012925 tgttgcattgaactttgaaagtgacagtt 2012897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 6013539 - 6013511
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  6013539 tgttgcattgaactttgaaagtgacagtt 6013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 31025119 - 31025147
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  31025119 tgttgcattgaactttgaaagtgacagtt 31025147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 7783017 - 7782987
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  7783017 aatgttgcattgaactttgaaagtgacagtt 7782987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 8464620 - 8464650
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  8464620 aatgttgcattgaactttgaaagtgacagtt 8464650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 10675968 - 10675938
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  10675968 aatgttgcattgaactttgaaagtgacagtt 10675938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 21927867 - 21927897
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  21927867 aatgttgcattgaactttgaaagtgacagtt 21927897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 28679087 - 28679057
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  28679087 aatgttgcattgaactttgaaagtgacagtt 28679057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 30686477 - 30686447
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  30686477 aatgttgcattgaactttgaaagtgacagtt 30686447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 31588910 - 31588940
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  31588910 aatgttgcattgaactttgaaagtgacagtt 31588940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 32994640 - 32994670
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  32994640 aatgttgcattgaactttgaaagtgacagtt 32994670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 35531466 - 35531496
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  35531466 aatgttgcattgaactttgaaagtgacagtt 35531496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 37437224 - 37437254
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  37437224 aatgttgcattgaactttgaaagtgacagtt 37437254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 45226748 - 45226778
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||||    
T  45226748 aatgttgcattgaactttgaaagtgacagtt 45226778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 9362037 - 9362009
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  9362037 tgttgcattgaactttgaaagtgacagtt 9362009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 15660651 - 15660623
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  15660651 tgttgcattgaactttgaaagtgacagtt 15660623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 19093334 - 19093306
Alignment:
Q  2 aatgttgcattgaactttgaaagtgacag 30  Q
    |||||||||||||||||||||||||||||    
T  19093334 aatgttgcattgaactttgaaagtgacag 19093306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 38597655 - 38597627
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  38597655 tgttgcattgaactttgaaagtgacagtt 38597627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 40926916 - 40926944
Alignment:
Q  4 tgttgcattgaactttgaaagtgacagtt 32  Q
    |||||||||||||||||||||||||||||    
T  40926916 tgttgcattgaactttgaaagtgacagtt 40926944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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