View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8253_low_19 (Length: 326)
Name: NF8253_low_19
Description: NF8253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8253_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 34626426 - 34626107
Alignment:
| Q |
1 |
atggaaaaaggcgatgacggtacattcgagagaaatctatgaaagaaattttaaaacatttgtttaaatgtatggatagattcaatagaataaaatttta |
100 |
Q |
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| T |
34626426 |
atggaaaaaggggatgacggtacattcgagagaaatctatgaaagaaattttaaaacatttgtttaaatgtatggatagattcgatagaataaaatttta |
34626327 |
T |
|
| Q |
101 |
attattaagcaccaataaaaggtacctgctttataggattcgactgaccctgtgaaagcaaagttg-------------ttgcctttgcgttgcaatgtt |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
34626326 |
attattaagcaccaataaaaggtacctgctttataggattcgactgaccctgtgaaagcaaagttgttgcaatgatttgttgcctttgcgttgcaatgtt |
34626227 |
T |
|
| Q |
188 |
tgtctaagtctaaccttagtacccttagatttcttggatggtcgaagtgacaaaattgtcatcagaaatggctcgcatggccttcaattctctgatgttg |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
34626226 |
tgtctaagtctaaccttagtacccttagatttcttggatggtggaattgacaaaattgtcatcagaaatggctcgcatggccttcaattctctgacgttg |
34626127 |
T |
|
| Q |
288 |
aacttcattaagaaccatga |
307 |
Q |
| |
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|||||||||||||||||||| |
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| T |
34626126 |
aacttcattaagaaccatga |
34626107 |
T |
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