View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8254_low_10 (Length: 280)
Name: NF8254_low_10
Description: NF8254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8254_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 43265539 - 43265800
Alignment:
| Q |
1 |
tgaagggataactgcatctagcctttggtacttgactcgttttgcgcacccgactcttcagtattttgttacatctaccaatgcttttagccgcccttcg |
100 |
Q |
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| T |
43265539 |
tgaagggataactgcatctagcctttggtacttgactcgttttgcgcacccgactcttcagtattttgttacatctaccaatgcttttagccgcccttcg |
43265638 |
T |
|
| Q |
101 |
actattattttttataacaatgactataatatcatggatatcattccttgattggttataatatattccaattaagcagccgctattataaaacaaatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43265639 |
actattattttttataacaatgactataatatcatggatatcattccttgattggttataatatattccaattaagcagccgctattataaaacaaatga |
43265738 |
T |
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| Q |
201 |
aaagtgattttcttgcctgatgcaggtgggtaagagctactaacgaatttcttggtgtacta |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43265739 |
aaagtgattttcttgcctgatgcaggtgggtaagagctactaacgaatttcttggtgtacta |
43265800 |
T |
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