View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8257_low_10 (Length: 332)
Name: NF8257_low_10
Description: NF8257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8257_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 15963834 - 15964142
Alignment:
| Q |
1 |
gtgtgacttgcacataacatcaaacaggacttgtcatcaaataataccatataaactgtaaactagactttacccttttaaccgttttcattttcattta |
100 |
Q |
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| T |
15963834 |
gtgtgacttgcacataacatcaaacaggacttgtcatcaaataataccatataaactgtaaactagactttacccttttaaccgttttcattttcattta |
15963933 |
T |
|
| Q |
101 |
aacttattttttcagttaaatattgcataattgagtggagaagatccgtaaaagcatcagtacagttagtaagatttatcaaatagaggatagtaaaata |
200 |
Q |
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| T |
15963934 |
aacttattttttcagttaattattgcataattgagtggagaagatccgtaaaagcatcagtacagttagtaagatttatcaaatagaggatagtaaaata |
15964033 |
T |
|
| Q |
201 |
gttagagatgaaagcacacaaaagaaaactataaaccagactattgagagatttagagataaatgatacatcttttggtttaacttaagacagtgttaag |
300 |
Q |
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| T |
15964034 |
gttagagataaaagcacacaaaagaaaactataaaccagactattgagagatttagagataaatgatacatctttaggtttaacttaagacagtgttaag |
15964133 |
T |
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| Q |
301 |
atattgttt |
309 |
Q |
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||||||||| |
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| T |
15964134 |
atattgttt |
15964142 |
T |
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