View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8259_high_9 (Length: 256)
Name: NF8259_high_9
Description: NF8259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8259_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18173368 - 18173604
Alignment:
| Q |
1 |
gaaaactaccaagcagtatttattttcttgattaagatgggagtaccaatcaaaatgagactaatagaatatagaatacgtgtatgtcaagacattaaat |
100 |
Q |
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| T |
18173368 |
gaaaactaccaagcagtatttattttcttgattaagatgggagtaccaatcaaaatgagactaatagaatatagaatacgtgtatgtcaagacattaaat |
18173467 |
T |
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| Q |
101 |
gtaataatttctttagattatccatacaaaagaattgcaatatcaaagttaatcaagtgagcatcaccaccatagaacagtttagtgcttgtcatgacat |
200 |
Q |
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| T |
18173468 |
gtaataatttctttagattatccatacaaaagaattgcaatatcaaagttaatcaagtgagcatcaccaccacagaacagtttagtgcttgtcatgacat |
18173567 |
T |
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| Q |
201 |
tactatgcactaattcaatcaatttgtagggtcatgt |
237 |
Q |
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| T |
18173568 |
tactaagcactaattcaatcaatttgtagggtcatgt |
18173604 |
T |
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