View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8260A_low_11 (Length: 515)

Name: NF8260A_low_11
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8260A_low_11
NF8260A_low_11
[»] chr1 (54 HSPs)
chr1 (315-509)||(50767536-50767747)
chr1 (231-315)||(20291279-20291363)
chr1 (231-314)||(20302198-20302281)
chr1 (231-314)||(47179428-47179511)
chr1 (174-222)||(23786232-23786280)
chr1 (231-314)||(6822775-6822858)
chr1 (231-314)||(47177078-47177161)
chr1 (176-222)||(9459277-9459323)
chr1 (176-222)||(9463104-9463150)
chr1 (176-222)||(16226561-16226607)
chr1 (176-222)||(16231956-16232002)
chr1 (176-222)||(24326055-24326101)
chr1 (176-222)||(47177755-47177801)
chr1 (176-222)||(47180106-47180152)
chr1 (231-314)||(13761577-13761660)
chr1 (231-306)||(16225895-16225970)
chr1 (231-286)||(16231369-16231424)
chr1 (231-314)||(51752104-51752187)
chr1 (176-222)||(23816277-23816323)
chr1 (176-222)||(47906658-47906704)
chr1 (176-222)||(51757927-51757973)
chr1 (176-224)||(13785107-13785155)
chr1 (230-281)||(28840451-28840503)
chr1 (176-222)||(2949079-2949126)
chr1 (176-222)||(16429340-16429387)
chr1 (176-222)||(39932467-39932514)
chr1 (176-219)||(46431548-46431591)
chr1 (176-222)||(8348905-8348951)
chr1 (176-222)||(51750431-51750476)
chr1 (178-222)||(25251123-25251168)
chr1 (179-211)||(9240937-9240969)
chr1 (175-222)||(10399668-10399716)
chr1 (175-222)||(13762228-13762276)
chr1 (230-281)||(28842266-28842318)
chr1 (175-222)||(39462909-39462957)
chr1 (176-222)||(6995540-6995587)
chr1 (182-224)||(11457328-11457371)
chr1 (176-222)||(18839975-18840022)
chr1 (231-314)||(23783238-23783321)
chr1 (176-222)||(25248398-25248445)
chr1 (176-222)||(30780435-30780482)
chr1 (176-222)||(40134331-40134378)
chr1 (231-314)||(51749778-51749861)
chr1 (176-222)||(13358966-13359011)
chr1 (176-222)||(13447117-13447162)
chr1 (176-222)||(15916775-15916821)
chr1 (176-222)||(20291849-20291894)
chr1 (176-222)||(31490299-31490345)
chr1 (176-222)||(31735365-31735411)
chr1 (176-224)||(14183455-14183503)
chr1 (193-222)||(15294694-15294723)
chr1 (174-211)||(17319286-17319323)
chr1 (176-224)||(2617908-2617955)
chr1 (232-314)||(47451405-47451488)
[»] chr8 (27 HSPs)
chr8 (231-314)||(43079347-43079430)
chr8 (231-314)||(43081722-43081805)
chr8 (231-314)||(18810483-18810566)
chr8 (231-314)||(18812668-18812751)
chr8 (176-222)||(24873039-24873085)
chr8 (176-222)||(28251410-28251457)
chr8 (176-222)||(3874441-3874487)
chr8 (176-222)||(18811156-18811202)
chr8 (176-222)||(28283062-28283108)
chr8 (174-222)||(3883434-3883482)
chr8 (176-222)||(14477693-14477740)
chr8 (176-222)||(33541255-33541302)
chr8 (232-281)||(12517482-12517532)
chr8 (176-222)||(43080050-43080096)
chr8 (176-222)||(43082421-43082467)
chr8 (176-222)||(43530563-43530609)
chr8 (176-217)||(18813335-18813376)
chr8 (176-222)||(22684491-22684539)
chr8 (176-222)||(15073155-15073202)
chr8 (176-222)||(15956396-15956443)
chr8 (176-222)||(17847955-17848002)
chr8 (176-222)||(21482751-21482798)
chr8 (176-222)||(4424467-4424512)
chr8 (176-222)||(15809666-15809711)
chr8 (176-222)||(32339758-32339803)
chr8 (176-222)||(44721291-44721337)
chr8 (176-224)||(35872301-35872350)
[»] chr3 (60 HSPs)
chr3 (231-314)||(6063923-6064006)
chr3 (231-314)||(38210067-38210150)
chr3 (172-222)||(747131-747181)
chr3 (231-315)||(50493675-50493759)
chr3 (174-222)||(50494371-50494419)
chr3 (231-314)||(35777163-35777246)
chr3 (231-314)||(53896671-53896754)
chr3 (232-298)||(10192447-10192513)
chr3 (176-222)||(10621366-10621412)
chr3 (176-222)||(38210743-38210789)
chr3 (231-314)||(7606880-7606963)
chr3 (231-286)||(38889786-38889841)
chr3 (176-222)||(6065633-6065679)
chr3 (176-222)||(9604447-9604493)
chr3 (232-298)||(10085527-10085593)
chr3 (176-222)||(25533796-25533842)
chr3 (176-222)||(28412870-28412916)
chr3 (173-222)||(53893890-53893939)
chr3 (232-314)||(18097339-18097422)
chr3 (232-314)||(18099624-18099707)
chr3 (231-314)||(22114759-22114842)
chr3 (176-222)||(25389279-25389326)
chr3 (176-222)||(456280-456325)
chr3 (176-222)||(458657-458702)
chr3 (176-222)||(6063283-6063329)
chr3 (176-222)||(10955867-10955912)
chr3 (176-222)||(10958163-10958208)
chr3 (176-222)||(31151708-31151754)
chr3 (176-222)||(43226449-43226495)
chr3 (176-224)||(23633814-23633862)
chr3 (175-222)||(27101021-27101069)
chr3 (175-222)||(28181370-28181418)
chr3 (175-222)||(28761286-28761334)
chr3 (176-222)||(3859883-3859930)
chr3 (176-222)||(4308122-4308169)
chr3 (231-286)||(5899487-5899542)
chr3 (176-222)||(18099010-18099057)
chr3 (232-313)||(5191374-5191456)
chr3 (192-222)||(5886570-5886600)
chr3 (192-222)||(5900043-5900073)
chr3 (231-281)||(11162924-11162974)
chr3 (176-222)||(11168474-11168519)
chr3 (174-219)||(36012199-36012245)
chr3 (176-222)||(38890413-38890459)
chr3 (176-222)||(41849425-41849470)
chr3 (176-222)||(51726847-51726892)
chr3 (193-222)||(5192023-5192052)
chr3 (193-222)||(5522482-5522511)
chr3 (193-222)||(10084245-10084274)
chr3 (193-222)||(10191168-10191197)
chr3 (185-222)||(43228659-43228696)
chr3 (174-222)||(45883310-45883359)
chr3 (173-208)||(2511246-2511282)
chr3 (176-208)||(17795637-17795669)
chr3 (175-222)||(18096739-18096787)
chr3 (176-208)||(19104077-19104109)
chr3 (176-222)||(32219455-32219503)
chr3 (176-219)||(35917876-35917920)
chr3 (174-214)||(43228695-43228735)
chr3 (176-219)||(53915338-53915382)
[»] scaffold0127 (2 HSPs)
scaffold0127 (231-314)||(12971-13054)
scaffold0127 (176-222)||(12715-12761)
[»] chr6 (37 HSPs)
chr6 (231-314)||(26068799-26068882)
chr6 (234-314)||(26066531-26066611)
chr6 (231-314)||(14507633-14507716)
chr6 (173-222)||(26065958-26066007)
chr6 (175-222)||(12195353-12195400)
chr6 (176-222)||(8717195-8717241)
chr6 (176-222)||(11982872-11982918)
chr6 (176-222)||(26068235-26068281)
chr6 (176-222)||(29754549-29754595)
chr6 (175-222)||(5273054-5273102)
chr6 (231-314)||(33308685-33308768)
chr6 (231-314)||(33310954-33311037)
chr6 (176-222)||(26932403-26932449)
chr6 (176-222)||(15367451-15367498)
chr6 (175-222)||(18322520-18322567)
chr6 (231-314)||(29755196-29755279)
chr6 (176-222)||(1230090-1230135)
chr6 (176-222)||(4816071-4816117)
chr6 (176-222)||(28241163-28241208)
chr6 (176-222)||(33309284-33309329)
chr6 (176-222)||(33311553-33311598)
chr6 (176-222)||(26065409-26065457)
chr6 (176-222)||(26085378-26085426)
chr6 (175-219)||(32280419-32280464)
chr6 (175-222)||(7294213-7294261)
chr6 (176-222)||(9020351-9020398)
chr6 (176-222)||(13057612-13057659)
chr6 (176-222)||(15346766-15346813)
chr6 (176-222)||(19704403-19704450)
chr6 (175-222)||(20915196-20915243)
chr6 (176-222)||(24338295-24338342)
chr6 (176-222)||(2628727-2628772)
chr6 (176-222)||(14458607-14458653)
chr6 (178-211)||(22491044-22491077)
chr6 (176-221)||(25480301-25480346)
chr6 (193-222)||(30967628-30967657)
chr6 (175-222)||(3629710-3629758)
[»] chr5 (48 HSPs)
chr5 (231-314)||(2174680-2174763)
chr5 (231-314)||(34479889-34479972)
chr5 (231-314)||(31544798-31544881)
chr5 (231-314)||(34477549-34477632)
chr5 (231-314)||(39797849-39797932)
chr5 (176-222)||(3372977-3373023)
chr5 (173-219)||(31179210-31179256)
chr5 (231-314)||(31542442-31542525)
chr5 (176-222)||(15354414-15354460)
chr5 (176-222)||(15356690-15356736)
chr5 (175-224)||(15552636-15552686)
chr5 (176-222)||(23665438-23665484)
chr5 (176-222)||(23741697-23741743)
chr5 (176-222)||(23793103-23793149)
chr5 (176-222)||(38959972-38960018)
chr5 (176-224)||(10528937-10528986)
chr5 (231-315)||(25921909-25921993)
chr5 (231-314)||(10749505-10749588)
chr5 (172-222)||(18469401-18469452)
chr5 (175-221)||(34530558-34530605)
chr5 (176-222)||(41585580-41585627)
chr5 (176-222)||(10750092-10750137)
chr5 (176-222)||(10757568-10757613)
chr5 (231-281)||(38881878-38881928)
chr5 (176-222)||(39798422-39798468)
chr5 (176-222)||(2175293-2175341)
chr5 (175-224)||(4237018-4237066)
chr5 (233-314)||(659713-659795)
chr5 (232-306)||(4236378-4236453)
chr5 (231-314)||(10756960-10757043)
chr5 (231-314)||(15354982-15355065)
chr5 (231-314)||(15357258-15357341)
chr5 (176-222)||(18467076-18467123)
chr5 (176-211)||(27910837-27910872)
chr5 (176-222)||(36402170-36402217)
chr5 (231-314)||(38960521-38960604)
chr5 (176-222)||(21684294-21684339)
chr5 (176-222)||(31543126-31543172)
chr5 (176-222)||(34476894-34476939)
chr5 (176-222)||(38882480-38882525)
chr5 (193-222)||(4410413-4410442)
chr5 (232-316)||(18186504-18186589)
chr5 (178-222)||(27912928-27912973)
chr5 (193-222)||(34479275-34479304)
chr5 (232-314)||(20504369-20504452)
chr5 (250-314)||(21684905-21684969)
chr5 (232-314)||(21947770-21947853)
chr5 (176-208)||(35430586-35430618)
[»] chr4 (65 HSPs)
chr4 (231-312)||(51015042-51015123)
chr4 (231-314)||(9176952-9177035)
chr4 (231-314)||(16932277-16932360)
chr4 (233-314)||(9174604-9174684)
chr4 (231-316)||(16934631-16934716)
chr4 (231-306)||(37089830-37089906)
chr4 (231-314)||(7941133-7941216)
chr4 (231-316)||(22783234-22783319)
chr4 (58-175)||(44310696-44310813)
chr4 (231-314)||(11434769-11434852)
chr4 (176-219)||(11437812-11437855)
chr4 (231-314)||(22780869-22780952)
chr4 (176-222)||(16931631-16931677)
chr4 (176-222)||(16933988-16934034)
chr4 (176-222)||(22780212-22780258)
chr4 (176-222)||(44599680-44599726)
chr4 (176-222)||(47868848-47868894)
chr4 (175-222)||(2891733-2891781)
chr4 (176-220)||(3937126-3937170)
chr4 (176-222)||(6765288-6765335)
chr4 (176-222)||(16453749-16453796)
chr4 (176-222)||(16455667-16455714)
chr4 (176-222)||(22046526-22046573)
chr4 (176-222)||(22802577-22802624)
chr4 (176-222)||(2484715-2484760)
chr4 (232-314)||(5637924-5638006)
chr4 (176-222)||(11006094-11006140)
chr4 (176-222)||(11008408-11008454)
chr4 (176-222)||(18847598-18847644)
chr4 (176-222)||(22782577-22782623)
chr4 (185-222)||(11435401-11435438)
chr4 (174-222)||(14787272-14787321)
chr4 (239-314)||(11006705-11006781)
chr4 (182-222)||(14633764-14633804)
chr4 (239-306)||(24888598-24888666)
chr4 (239-314)||(36920050-36920125)
chr4 (175-222)||(38928023-38928071)
chr4 (175-222)||(9148681-9148728)
chr4 (176-222)||(14789273-14789320)
chr4 (176-222)||(18709003-18709050)
chr4 (176-222)||(24889239-24889286)
chr4 (176-222)||(27499489-27499536)
chr4 (176-222)||(36921338-36921385)
chr4 (176-222)||(37089212-37089259)
chr4 (175-222)||(38409650-38409697)
chr4 (176-222)||(5198850-5198895)
chr4 (176-222)||(5635318-5635363)
chr4 (176-222)||(8631260-8631305)
chr4 (231-281)||(22048492-22048542)
chr4 (176-222)||(22132229-22132275)
chr4 (176-222)||(22134457-22134503)
chr4 (176-222)||(24348647-24348692)
chr4 (176-222)||(31849440-31849485)
chr4 (176-221)||(49088998-49089044)
chr4 (193-222)||(9176331-9176360)
chr4 (193-222)||(17662108-17662137)
chr4 (176-220)||(22800705-22800750)
chr4 (176-224)||(24446502-24446551)
chr4 (182-222)||(36919435-36919476)
chr4 (181-225)||(3578537-3578580)
chr4 (176-222)||(18311215-18311263)
chr4 (176-222)||(18409192-18409240)
chr4 (176-208)||(22295614-22295646)
chr4 (174-222)||(26085816-26085863)
chr4 (194-222)||(47210655-47210683)
[»] chr7 (44 HSPs)
chr7 (231-314)||(1047420-1047503)
chr7 (172-222)||(25542930-25542980)
chr7 (175-222)||(1606781-1606828)
chr7 (176-222)||(20297764-20297810)
chr7 (176-222)||(25276520-25276566)
chr7 (176-222)||(38394388-38394434)
chr7 (174-222)||(20299862-20299910)
chr7 (176-222)||(7349117-7349164)
chr7 (176-222)||(7351491-7351538)
chr7 (175-222)||(22137481-22137528)
chr7 (175-222)||(40552508-40552555)
chr7 (176-222)||(9027034-9027080)
chr7 (176-222)||(11759529-11759575)
chr7 (176-222)||(28485967-28486013)
chr7 (176-222)||(31153691-31153737)
chr7 (176-222)||(40550231-40550277)
chr7 (177-222)||(28487955-28488000)
chr7 (176-224)||(2935669-2935716)
chr7 (239-314)||(3878322-3878398)
chr7 (231-314)||(2935070-2935153)
chr7 (231-314)||(9027604-9027687)
chr7 (176-222)||(13099317-13099364)
chr7 (175-222)||(20626435-20626482)
chr7 (175-222)||(20630326-20630373)
chr7 (175-222)||(20642745-20642792)
chr7 (231-314)||(40837178-40837261)
chr7 (176-222)||(44966-45012)
chr7 (176-222)||(7469864-7469910)
chr7 (176-222)||(7471821-7471867)
chr7 (191-222)||(1046773-1046804)
chr7 (231-314)||(22136878-22136961)
chr7 (231-314)||(40551905-40551988)
chr7 (176-222)||(40836583-40836630)
chr7 (176-222)||(42223553-42223600)
chr7 (176-222)||(1502816-1502861)
chr7 (176-222)||(1850383-1850429)
chr7 (176-222)||(48458055-48458100)
chr7 (178-219)||(3036129-3036170)
chr7 (176-224)||(21680423-21680472)
chr7 (193-222)||(38397041-38397070)
chr7 (194-222)||(36031-36059)
chr7 (183-222)||(4295788-4295828)
chr7 (176-208)||(24465943-24465975)
chr7 (232-315)||(27306685-27306768)
[»] chr2 (27 HSPs)
chr2 (231-306)||(19502467-19502542)
chr2 (176-222)||(36560981-36561027)
chr2 (176-222)||(45332020-45332066)
chr2 (231-315)||(19504801-19504885)
chr2 (231-306)||(27104523-27104598)
chr2 (175-222)||(36558720-36558767)
chr2 (231-314)||(36559275-36559358)
chr2 (231-314)||(45332592-45332675)
chr2 (176-221)||(11739421-11739467)
chr2 (176-222)||(19504178-19504223)
chr2 (176-222)||(35215433-35215479)
chr2 (176-222)||(35217810-35217856)
chr2 (176-222)||(42453845-42453890)
chr2 (173-222)||(13909881-13909932)
chr2 (176-222)||(17849480-17849528)
chr2 (176-222)||(19008003-19008051)
chr2 (182-222)||(45279848-45279888)
chr2 (176-222)||(22874472-22874519)
chr2 (176-222)||(24162063-24162110)
chr2 (231-314)||(24162669-24162752)
chr2 (231-314)||(36561594-36561677)
chr2 (176-222)||(43623423-43623470)
chr2 (176-222)||(19501843-19501888)
chr2 (176-224)||(20146459-20146508)
chr2 (193-222)||(23452094-23452123)
chr2 (182-222)||(27105165-27105206)
chr2 (232-314)||(40032503-40032586)
[»] scaffold0472 (2 HSPs)
scaffold0472 (176-222)||(6600-6646)
scaffold0472 (231-314)||(5927-6010)
[»] scaffold1674 (1 HSPs)
scaffold1674 (178-222)||(1294-1338)
[»] scaffold0025 (2 HSPs)
scaffold0025 (239-306)||(73468-73536)
scaffold0025 (239-306)||(69757-69825)
[»] scaffold0140 (4 HSPs)
scaffold0140 (176-222)||(22518-22564)
scaffold0140 (176-222)||(24793-24839)
scaffold0140 (231-314)||(21915-21998)
scaffold0140 (231-314)||(24190-24273)
[»] scaffold0267 (1 HSPs)
scaffold0267 (174-222)||(427-475)
[»] scaffold0131 (2 HSPs)
scaffold0131 (176-222)||(14231-14276)
scaffold0131 (179-221)||(15393-15436)
[»] scaffold0038 (1 HSPs)
scaffold0038 (176-222)||(41325-41370)
[»] scaffold1899 (1 HSPs)
scaffold1899 (185-222)||(16-53)
[»] scaffold0370 (1 HSPs)
scaffold0370 (189-222)||(1306-1339)
[»] scaffold0005 (3 HSPs)
scaffold0005 (174-222)||(52409-52458)
scaffold0005 (182-222)||(183488-183528)
scaffold0005 (176-222)||(50410-50457)
[»] scaffold0250 (1 HSPs)
scaffold0250 (179-222)||(3280-3322)
[»] scaffold0154 (1 HSPs)
scaffold0154 (177-222)||(11315-11361)
[»] scaffold0068 (2 HSPs)
scaffold0068 (176-222)||(29571-29616)
scaffold0068 (250-314)||(28941-29005)
[»] scaffold0031 (1 HSPs)
scaffold0031 (173-222)||(79584-79634)
[»] scaffold0078 (1 HSPs)
scaffold0078 (176-208)||(23340-23372)


Alignment Details
Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 315 - 509
Target Start/End: Complemental strand, 50767747 - 50767536
Alignment:
Q  315 ttaattaacttttatatagttagagaaagatgtttgtgaatttacnnnnnnnctactaatgtaacatgttatgacggtatcccttgtga----------- 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||               
T  50767747 ttaattaacttttatatagttagagaaagatgtttgtgaatttacaaaaaaactagtaatgtaacatgttatgacggtatcccttgtgaaggcgtcctga 50767648  T
Q  404 ------tattttccatgaatatttcgtccttattccatttgtcttttgttttcatctgtacaatttaaaaatgcaccatctatctcattccattcattca 497  Q
          |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50767647 gagagatatttttcatgaatatttcgtccttattccatttgtcttttgttttcatctgtacaatttaaaaatgcaccatctatctcattccattcattca 50767548  T
Q  498 tatttcattatc 509  Q
    ||||||||||||    
T  50767547 tatttcattatc 50767536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 20291363 - 20291279
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacat 315  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||| || |||||||| ||||||| ||||||||    
T  20291363 aaaaactgaaacctccaccgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaactctcacat 20291279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 20302281 - 20302198
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||||||| || |||| ||||| |||| || |||||||| ||||||| |||||||    
T  20302281 aaaaactgaaacctccatcgtgccacgttgccttgccatcatgccgcgattctgcagaaatctgattttaagttaactctcaca 20302198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 47179511 - 47179428
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  47179511 aaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 47179428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 23786280 - 23786232
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23786280 agtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 23786232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 6822858 - 6822775
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  6822858 aaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 6822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 47177161 - 47177078
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  | | ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  47177161 aaaaactaaaacctccatcgtgccacgttgcccagtcgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 47177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 9459277 - 9459323
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  9459277 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 9459323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 9463104 - 9463150
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  9463104 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 9463150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16226607 - 16226561
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16226607 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 16226561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16232002 - 16231956
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16232002 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 16231956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 24326101 - 24326055
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24326101 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 24326055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 47177801 - 47177755
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  47177801 tgttgtgaattcgatcaaaaatcacaccaataacaacttgatgtgtg 47177755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 47180152 - 47180106
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  47180152 tgttgtgaattcgatcaaaaatcacaccaataacaacttgatgtgtg 47180106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 13761660 - 13761577
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||| ||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  13761660 aaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 16225970 - 16225895
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    ||||||||||||||||||||||||||||||||   || ||||||||||||| |||| ||  ||||||| |||||||    
T  16225970 aaaaactaaaacctccatcgtgccacgttgcccaaccgtcgtgccacgattctgcagaaacctgattttaagttaa 16225895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 16231424 - 16231369
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgca 286  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||    
T  16231424 aaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgca 16231369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 51752187 - 51752104
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||   || ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  51752187 aaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 51752104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 23816323 - 23816277
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  23816323 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 23816277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 47906704 - 47906658
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47906704 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 47906658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 51757973 - 51757927
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  51757973 tgttgtgaattcgatgaaaaatgacaccaataacaacttgatgtgtg 51757927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 13785107 - 13785155
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtgaa 224  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  13785107 tgttgtgaatttgttaaaaaatcacaccaataaaaacttgatgtgtgaa 13785155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 28840503 - 28840451
Alignment:
Q  230 taaaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgatt 281  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  28840503 taaaaactgaaacctccaatcgtgccacgttgccttgccatcgtgccacgatt 28840451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 2949079 - 2949126
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  2949079 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 2949126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16429387 - 16429340
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  16429387 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 16429340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 39932514 - 39932467
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  39932514 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 39932467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 46431548 - 46431591
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgt 219  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||    
T  46431548 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgt 46431591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 8348905 - 8348951
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  8348905 tgttgtgaattcgatgaaaaatcacaccaataaaaacttgacgtgtg 8348951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 51750476 - 51750431
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  51750476 tgttgcgaattcgataaaaa-tcacaccaataacaacttgatgtgtg 51750431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 25251123 - 25251168
Alignment:
Q  178 ttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||    
T  25251123 ttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 25251168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 9240937 - 9240969
Alignment:
Q  179 tgtgaattcgataaaaaatcacaccaataacaa 211  Q
    |||||||||||||||||||||||||||||||||    
T  9240937 tgtgaattcgataaaaaatcacaccaataacaa 9240969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 10399668 - 10399716
Alignment:
Q  175 gtgttgtgaattcgataaaaa-atcacaccaataacaacttgatgtgtg 222  Q
    |||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  10399668 gtgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtg 10399716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 13762276 - 13762228
Alignment:
Q  175 gtgttgtgaattcgataa-aaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  13762276 gtgttgcgaattcgatgagaaaatcacaccaataacaacttgatgtgtg 13762228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 28842318 - 28842266
Alignment:
Q  230 taaaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgatt 281  Q
    |||||||| ||||||||| ||||||||||| |||||||| |||||||||||||    
T  28842318 taaaaactgaaacctccaatcgtgccacgtagccttgccatcgtgccacgatt 28842266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 39462957 - 39462909
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  39462957 gtgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 39462909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 6995540 - 6995587
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  6995540 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 6995587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 11457328 - 11457371
Alignment:
Q  182 gaattcgataaaaaatcacaccaataac-aacttgatgtgtgaa 224  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  11457328 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtgaa 11457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 18840022 - 18839975
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  18840022 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 18839975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 23783321 - 23783238
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  23783321 aaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 25248398 - 25248445
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  25248398 tgttgtgaattcgatgaaaaatcacaacaataacaaacttgatgtgtg 25248445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 30780482 - 30780435
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||    
T  30780482 tgttgtgaattcgatgaaaactcacaccaataacaaacttgatgtgtg 30780435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 40134378 - 40134331
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  40134378 tgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtg 40134331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 51749861 - 51749778
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||| ||||||||||   || ||||||||||||| |||| ||   |||||| ||||||| |||||||    
T  51749861 aaaaactgaaacctccatcgtaccacgttgcccaaccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 13359011 - 13358966
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  13359011 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 13358966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 13447117 - 13447162
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  13447117 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 13447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 15916821 - 15916775
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  15916821 tgttgtgaattcgatgaaaagtcacaccaataaatacttgatgtgtg 15916775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 20291894 - 20291849
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  20291894 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 20291849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 31490345 - 31490299
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  31490345 tgttgcgaattcgatgaaaaatcacaccaatacaaacttgatgtgtg 31490299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 31735365 - 31735411
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| | |||| ||||||||||||||||||||||||    
T  31735365 tgttgcgaattcgatgagaaattacaccaataacaacttgatgtgtg 31735411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 14183455 - 14183503
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataaca-acttgatgtgtgaa 224  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  14183455 tgttgtgaattcgat-aaaaatcacaccaataaaatacttgatgtgtgaa 14183503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 15294694 - 15294723
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  15294694 aaaatcacaccaataacaacttgatgtgtg 15294723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 17319323 - 17319286
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaa 211  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  17319323 agtgttgtgaattcgatgaaaaatcgcaccaataacaa 17319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 2617955 - 2617908
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtgaa 224  Q
    ||||| ||||||||| ||||  |||||||||||||||||||||||||||    
T  2617955 tgttgcgaattcgatgaaaac-cacaccaataacaacttgatgtgtgaa 2617908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 47451488 - 47451405
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgatta-tgcataactctgatttgaagttaaatctcaca 314  Q
    |||||| ||||||||| ||||||||| |||||  ||| |||||||||||||  |||| || |||||||||||||||| |||||||    
T  47451488 aaaactgaaacctccaatcgtgccacattgcccagccatcgtgccacgatttctgcaaaa-tctgatttgaagttaactctcaca 47451405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 43079430 - 43079347
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  43079430 aaaaactaaaacctccatcgtgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 43079347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 43081805 - 43081722
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  43081805 aaaaactaaaacctccatcgtgccactttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 43081722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 18810566 - 18810483
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||| ||||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  18810566 aaaaaataaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 18812751 - 18812668
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| | || ||  ||||||| ||||||| |||||||    
T  18812751 aaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattcttcagaaacctgattttaagttaactctcaca 18812668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 24873039 - 24873085
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24873039 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 24873085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 28251410 - 28251457
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28251410 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtg 28251457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 3874487 - 3874441
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||    
T  3874487 tgttgtgaattcgttgaaaaatcacaccaataacaacttgatgtgtg 3874441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 18811202 - 18811156
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  18811202 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 18811156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 28283062 - 28283108
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  28283062 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 28283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 3883434 - 3883482
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  3883434 agtgttgcgaattcgatgaaaaatcacatcaataacaacttgatgtgtg 3883482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 14477740 - 14477693
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  14477740 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 14477693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 33541255 - 33541302
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  33541255 tgttgtgaattcgatcaaaaatcacaccaataacaaacttgatgtgtg 33541302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 12517482 - 12517532
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgatt 281  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  12517482 aaaactgaaacctccaatcgtgccacgttgccttgccatcgtgccacgatt 12517532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 43080096 - 43080050
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||    
T  43080096 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtg 43080050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 43082467 - 43082421
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||    
T  43082467 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtg 43082421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 43530609 - 43530563
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||    
T  43530609 tgttgcgaattcaatgaaaaatcacaccaataacaacttgatgtgtg 43530563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 18813376 - 18813335
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgat 217  Q
    ||||| ||||||||| ||||||||||||||||||||||||||    
T  18813376 tgttgcgaattcgatgaaaaatcacaccaataacaacttgat 18813335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 22684491 - 22684539
Alignment:
Q  176 tgttgtgaattcgat--aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  22684491 tgttgcgaattcgatggaaaaaatcacaccaataacaacttgatgtgtg 22684539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 15073202 - 15073155
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  15073202 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 15073155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 15956443 - 15956396
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  15956443 tgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtg 15956396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 17848002 - 17847955
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataaca-acttgatgtgtg 222  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  17848002 tgttgtgaattcgttaaaaaatcacaccaataaaatacttgatgtgtg 17847955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 21482798 - 21482751
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa-caacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||    
T  21482798 tgttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtg 21482751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 4424512 - 4424467
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  4424512 tgttgtgaattcgatgaaaa-tcacaccaataacaacttggtgtgtg 4424467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 15809711 - 15809666
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  15809711 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 15809666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 32339803 - 32339758
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  32339803 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 32339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 44721337 - 44721291
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| || ||||||||||||||||||||||||||||    
T  44721337 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtg 44721291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 35872301 - 35872350
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtgaa 224  Q
    ||||||||||||||| | ||| |||||||||||| |||||||||||||||    
T  35872301 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtgaa 35872350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 6063923 - 6064006
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||  ||||||| ||||||| |||||||    
T  6063923 aaaaactaaaacctccattgtgccacgttgccttgccatcgtgccacgattctgcataaacctgattttaagttaattctcaca 6064006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 38210150 - 38210067
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  38210150 aaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 38210067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 747181 - 747131
Alignment:
Q  172 gaagtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  747181 gaagtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 747131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 50493759 - 50493675
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacat 315  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||| ||  ||||||| ||||||| ||||||||    
T  50493759 aaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattctgcagaaacctgattttaagttaactctcacat 50493675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 50494419 - 50494371
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50494419 agtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 50494371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 35777246 - 35777163
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||| || ||| |||| ||||||| |||||||    
T  35777246 aaaaactaaaacctccatcgtgccacgttgcccagctgtcgtgccacgattctgcagaaatctaattttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 53896671 - 53896754
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  53896671 aaaaactaaaacctccatcgtgccacgttgcccagcaatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 53896754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 10192447 - 10192513
Alignment:
Q  232 aaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgattt 298  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||||  |||||| ||||||||    
T  10192447 aaaactgaaacctccatcgtgccacgttgccttgcgatcgtgccacgattccgcataaatctgattt 10192513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 10621366 - 10621412
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  10621366 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 10621412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 38210789 - 38210743
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  38210789 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 38210743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 7606880 - 7606963
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||  ||| ||||| ||||||| |||| ||  ||||||| ||||||| |||||||    
T  7606880 aaaaactgaaacctccatcgtgccacgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcaca 7606963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 38889841 - 38889786
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgca 286  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  38889841 aaaaactgaaacctccatcgtgccacgttgccttgccatcgtaccacgattctgca 38889786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 6065633 - 6065679
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  6065633 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 6065679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 9604447 - 9604493
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9604447 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 9604493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 10085527 - 10085593
Alignment:
Q  232 aaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgattt 298  Q
    |||||| ||||||||||||||||||||||||||||  || ||||||||||  |||||| ||||||||    
T  10085527 aaaactgaaacctccatcgtgccacgttgccttgcgatcatgccacgattccgcataaatctgattt 10085593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 25533842 - 25533796
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  25533842 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 25533796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 28412870 - 28412916
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  28412870 tgttgtgaattcgatgaaaaaacacaccaataacaacttgatgtgtg 28412916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 53893890 - 53893939
Alignment:
Q  173 aagtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  53893890 aagtgttgtaaattcgatcgaaaatcacaccaataacaacttgatgtgtg 53893939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 18097339 - 18097422
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||| ||||||||| |||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  18097339 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 18097422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 18099624 - 18099707
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||| ||||||||| |||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  18099624 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 18099707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 22114759 - 22114842
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||   || ||||||||||||| | || ||  ||||||| ||||||| |||||||    
T  22114759 aaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctacagaaacctgattttaagttaactctcaca 22114842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 25389326 - 25389279
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  25389326 tgttgtgaattcgatgaaaaaatcataccaataacaacttgatgtgtg 25389279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 456325 - 456280
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  456325 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 456280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 458702 - 458657
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  458702 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 458657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 6063283 - 6063329
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  6063283 tgttgcgaattcgatgaaaaatcacaccgataacaacttgatgtgtg 6063329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 10955867 - 10955912
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  10955867 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 10955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 10958163 - 10958208
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  10958163 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 10958208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 31151754 - 31151708
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||    
T  31151754 tgttgtgaattcgatgaaaaatcacaccaataaatacttgatgtgtg 31151708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 43226495 - 43226449
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||    
T  43226495 tgttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtg 43226449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 23633862 - 23633814
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtgaa 224  Q
    ||||||||||||||| |||||||||||||||||  ||| ||||||||||    
T  23633862 tgttgtgaattcgatgaaaaatcacaccaataaatactagatgtgtgaa 23633814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 27101021 - 27101069
Alignment:
Q  175 gtgttgtgaattcgataaaaa-atcacaccaataacaacttgatgtgtg 222  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  27101021 gtgtcgtgaattcgatgaaaatatcacaccaataacaacttgatgtgtg 27101069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 28181418 - 28181370
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||||||||||||  |||||||||||||||||| |||||||||||||    
T  28181418 gtgttgtgaattcgaacaaaaatcacaccaataacaaacttgatgtgtg 28181370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 28761286 - 28761334
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaa-cttgatgtgtg 222  Q
    |||||||||||||||| ||||||||||||||||| || |||||||||||    
T  28761286 gtgttgtgaattcgatgaaaaatcacaccaataataatcttgatgtgtg 28761334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 3859930 - 3859883
Alignment:
Q  176 tgttgtgaattcgataaaaaa-tcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||    
T  3859930 tgttgtgaattcgatcgaaaagtcacaccaataacaacttgatgtgtg 3859883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 4308122 - 4308169
Alignment:
Q  176 tgttgtgaattcgataaaaa-atcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  4308122 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtg 4308169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 5899542 - 5899487
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgca 286  Q
    |||||||||||| ||||||||||||||||||| | |  |||||||| |||||||||    
T  5899542 aaaaactaaaacatccatcgtgccacgttgcccttcaatcgtgccatgattatgca 5899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 18099010 - 18099057
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  18099010 tgttgggaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 18099057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 5191456 - 5191374
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcac 313  Q
    |||||| ||||||||| |||||||||| ||||  ||  ||||||||||||| |||| || |||||||| ||||||| ||||||    
T  5191456 aaaactgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 5886600 - 5886570
Alignment:
Q  192 aaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||||||||||||||||||    
T  5886600 aaaaatcacaccaataacaacttgatgtgtg 5886570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 5900073 - 5900043
Alignment:
Q  192 aaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||||||||||||||||||    
T  5900073 aaaaatcacaccaataacaacttgatgtgtg 5900043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 11162974 - 11162924
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgatt 281  Q
    ||||||| ||||||||||||||||||||||||  ||  |||||||||||||    
T  11162974 aaaaactgaaacctccatcgtgccacgttgcccagcaatcgtgccacgatt 11162924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 11168519 - 11168474
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  11168519 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 11168474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 36012245 - 36012199
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgt 219  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  36012245 agtgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgt 36012199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 38890459 - 38890413
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||    
T  38890459 tgttgtgaattctatccgaaatcacaccaataacaacttgatgtgtg 38890413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 41849470 - 41849425
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  41849470 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 41849425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 51726847 - 51726892
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  51726847 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 51726892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 5192052 - 5192023
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  5192052 aaaatcacaccaataacaacttgatgtgtg 5192023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 5522482 - 5522511
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  5522482 aaaatcacaccaataacaacttgatgtgtg 5522511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 10084245 - 10084274
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  10084245 aaaatcacaccaataacaacttgatgtgtg 10084274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 10191168 - 10191197
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  10191168 aaaatcacaccaataacaacttgatgtgtg 10191197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 43228696 - 43228659
Alignment:
Q  185 ttcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| | |||||||||||||||||||||||||||||    
T  43228696 ttcgatgagaaatcacaccaataacaacttgatgtgtg 43228659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 45883359 - 45883310
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||||  |||||||| |||||||||||||||||| |||||||||||||    
T  45883359 agtgttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 45883310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 2511246 - 2511282
Alignment:
Q  173 aagtgttgtgaattcgat-aaaaaatcacaccaataa 208  Q
    |||||||||||||||||| ||||||||||||||||||    
T  2511246 aagtgttgtgaattcgataaaaaaatcacaccaataa 2511282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 17795669 - 17795637
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa 208  Q
    ||||||||||||||| |||||||||||||||||    
T  17795669 tgttgtgaattcgatgaaaaatcacaccaataa 17795637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 18096739 - 18096787
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||| ||||||||| |||||| ||||||||||| |||||||||||||    
T  18096739 gtgttgcgaattcgatgaaaaattacaccaataacaaacttgatgtgtg 18096787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 19104109 - 19104077
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa 208  Q
    ||||||||||||||| |||||||||||||||||    
T  19104109 tgttgtgaattcgatgaaaaatcacaccaataa 19104077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 32219503 - 32219455
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  32219503 tgttgtgaattcgatgaaaaaatcacacaaataacaaacttgatgtgtg 32219455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 35917876 - 35917920
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgt 219  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||    
T  35917876 tgttgcgaattcgatgaaaaaattacaccaataacaacttgatgt 35917920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 43228735 - 43228695
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaactt 214  Q
    ||||||| ||||||||| | |||||||||||||||||||||    
T  43228735 agtgttgcgaattcgatgagaaatcacaccaataacaactt 43228695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 53915338 - 53915382
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgt 219  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||    
T  53915338 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgt 53915382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 12971 - 13054
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  12971 aaaaactaaaacctccatcgtgccacgttgccttgacatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 12715 - 12761
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  12715 tgttgtgaattcgatgaaaaatgacaccaataacaacttgatgtgtg 12761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 26068799 - 26068882
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  26068799 aaaaactaaaacctccatcatgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 26066531 - 26066611
Alignment:
Q  234 aactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | || ||  ||||||| ||||||| |||||||    
T  26066531 aactaaaacctccatcgtgccacgttgccttgccgtcgtgccacgattctacagaaacctgattttaagttaactctcaca 26066611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 14507633 - 14507716
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||  ||| ||||||||||||| |||| || |||||||| ||||||| |||||||    
T  14507633 aaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 26065958 - 26066007
Alignment:
Q  173 aagtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26065958 aagtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 26066007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 12195353 - 12195400
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12195353 gtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 12195400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 8717195 - 8717241
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  8717195 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 8717241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 11982872 - 11982918
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  11982872 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 11982918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 26068235 - 26068281
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  26068235 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 26068281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 29754549 - 29754595
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  29754549 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 29754595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 5273054 - 5273102
Alignment:
Q  175 gtgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5273054 gtgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtg 5273102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 33308768 - 33308685
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||||||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  33308768 aaaaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33308685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 33311037 - 33310954
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||||||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  33311037 aaaaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 26932403 - 26932449
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  26932403 tgttgtgaatttgatgaaaaatcacaccaataacaacttgatgtgtg 26932449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 15367498 - 15367451
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  15367498 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 15367451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 18322567 - 18322520
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||    
T  18322567 gtgttgcgaattctatgaaaaatcacaccaataacaacttgatgtgtg 18322520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 29755196 - 29755279
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  29755196 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 1230090 - 1230135
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1230090 tgttgcgaattcgataaaa-atcacaccaataacaacttgatgtgtg 1230135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 4816071 - 4816117
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||    
T  4816071 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtg 4816117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 28241163 - 28241208
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  28241163 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 28241208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 33309329 - 33309284
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  33309329 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 33309284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 33311598 - 33311553
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  33311598 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 33311553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 26065457 - 26065409
Alignment:
Q  176 tgttgtgaattcgataa--aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  26065457 tgttgtgaattcgatgagaaaaatcacaccaataacaacttgatgtgtg 26065409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 26085426 - 26085378
Alignment:
Q  176 tgttgtgaattcgataa--aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  26085426 tgttgtgaattcgatgagaaaaatcacaccaataacaacttgatgtgtg 26085378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 32280464 - 32280419
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgt 219  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||    
T  32280464 gtgttgtgaattcgataaaaaatcacacaaataacaaacttgatgt 32280419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 7294261 - 7294213
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataaca-acttgatgtgtg 222  Q
    |||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  7294261 gtgttgtgaattcgttaaaaaatcacaccaataaaatacttgatgtgtg 7294213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 9020398 - 9020351
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  9020398 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 9020351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 13057659 - 13057612
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  13057659 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 13057612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 15346813 - 15346766
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||| |||||||| |||||||||||||||||| |||||||||||||    
T  15346813 tgttgtaaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 15346766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19704403 - 19704450
Alignment:
Q  176 tgttgtgaattcgataaa-aaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||    
T  19704403 tgttgtgaattcgatcgagaaatcacaccaataacaacttgatgtgtg 19704450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 20915196 - 20915243
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||  ||| ||||||||||||||||| |||||||||||||    
T  20915196 gtgttgtgaatctgatcaaaaatcacaccaataataacttgatgtgtg 20915243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 24338295 - 24338342
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  24338295 tgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtg 24338342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 2628727 - 2628772
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  2628727 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 2628772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 14458607 - 14458653
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| ||||||||||||||||| | |||||||||||    
T  14458607 tgttgcgaattcgatgaaaaatcacaccaataatagcttgatgtgtg 14458653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 22491077 - 22491044
Alignment:
Q  178 ttgtgaattcgataaaaaatcacaccaataacaa 211  Q
    ||||||||||||| ||||||||||||||||||||    
T  22491077 ttgtgaattcgatgaaaaatcacaccaataacaa 22491044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 25480346 - 25480301
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgt 221  Q
    ||||||||||||||| |||||||||||||||||  | |||||||||    
T  25480346 tgttgtgaattcgatgaaaaatcacaccaataaatatttgatgtgt 25480301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 30967657 - 30967628
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  30967657 aaaatcacaccaataacaacttgatgtgtg 30967628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 3629710 - 3629758
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||||||||||||| | ||| |||||||||||| |||||||||||||    
T  3629710 gtgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtg 3629758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 2174763 - 2174680
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  2174763 aaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 34479889 - 34479972
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  34479889 aaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 34479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 31544881 - 31544798
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  31544881 aaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 31544798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 34477549 - 34477632
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||| ||   |||||| ||||||| |||||||    
T  34477549 aaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 34477632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 39797932 - 39797849
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||| ||||||||||||  ||| |||||||||||||||||| ||  ||||||| ||||||| |||||||    
T  39797932 aaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattatgcagaaacctgattttaagttaactctcaca 39797849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 3372977 - 3373023
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  3372977 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 3373023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 31179210 - 31179256
Alignment:
Q  173 aagtgttgtgaattcgataaaaaatcacaccaataacaacttgatgt 219  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  31179210 aagtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgt 31179256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 31542525 - 31542442
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||  ||||| ||||||| |||| ||  ||||||| ||||||| |||||||    
T  31542525 aaaaactaaaacctccatcgtgccacgttgcccagctatcgtgtcacgattttgcagaaacctgattttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 15354414 - 15354460
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  15354414 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 15354460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 15356690 - 15356736
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  15356690 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 15356736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 15552686 - 15552636
Alignment:
Q  175 gtgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgtgtgaa 224  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  15552686 gtgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgcgtgaa 15552636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 23665484 - 23665438
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  23665484 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 23665438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 23741697 - 23741743
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  23741697 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 23741743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 23793103 - 23793149
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  23793103 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 23793149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 38959972 - 38960018
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  38959972 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 38960018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 10528937 - 10528986
Alignment:
Q  176 tgttgtgaattcgataa-aaaatcacaccaataacaacttgatgtgtgaa 224  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  10528937 tgttgtgaattcgatgagaaaatcacaccaataacaacttgatgtgtgaa 10528986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 25921909 - 25921993
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacat 315  Q
    ||||||| |||||||||||||||||||||| |   || ||||||||||||| |||| ||  ||||||| ||||||| ||||||||    
T  25921909 aaaaactgaaacctccatcgtgccacgttgtccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcacat 25921993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 10749588 - 10749505
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  10749588 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 18469452 - 18469401
Alignment:
Q  172 gaagtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  18469452 gaagtgttgtgaattcgatgaaaaatcataccaataacaaacttgatgtgtg 18469401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 34530558 - 34530605
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgt 221  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  34530558 gtgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgt 34530605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 41585580 - 41585627
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  41585580 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 41585627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 10750137 - 10750092
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  10750137 tgttgtgaattcgatcaaaa-tcacaccaataacaacttgatgtgtg 10750092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 10757613 - 10757568
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  10757613 tgttgtgaattcgatcaaaa-tcacaccaataacaacttgatgtgtg 10757568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 38881928 - 38881878
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgatt 281  Q
    ||||||||||||||||||||||||||||||||  ||  |||||||||||||    
T  38881928 aaaaactaaaacctccatcgtgccacgttgcccagcaatcgtgccacgatt 38881878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 39798468 - 39798422
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  39798468 tgttgcgaattcgatgaaaaatcacaccaataacaatttgatgtgtg 39798422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 2175341 - 2175293
Alignment:
Q  176 tgttgtgaattcgataaaaaa--tcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  2175341 tgttgtgaattcgatcaaaaaagtcacaccaataacaacttgatgtgtg 2175293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 4237066 - 4237018
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtgaa 224  Q
    |||||||||||||| | |||| ||||||||||||||||||||||||||||    
T  4237066 gtgttgtgaattcgttgaaaa-tcacaccaataacaacttgatgtgtgaa 4237018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 659795 - 659713
Alignment:
Q  233 aaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacga-ttatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||| ||||||||| |||||||||||||||| ||| ||||||||||| || |||| ||| ||||||| ||||||| |||||||    
T  659795 aaactgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatttctgcagaac-ctgattttaagttaactctcaca 659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 4236453 - 4236378
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    |||||| ||||||||| |||||||||||||||  ||| ||||||||| ||| |||| || |||||||| |||||||    
T  4236453 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacaattctgcagaaatctgattttaagttaa 4236378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 10757043 - 10756960
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| |||||| |||||| |||| ||  ||||||| ||||||| |||||||    
T  10757043 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgctacgattgtgcagaaacctgattttaagttaactctcaca 10756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 15354982 - 15355065
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  15354982 aaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15355065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 15357258 - 15357341
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  15357258 aaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 18467123 - 18467076
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  18467123 tgttgtgaattcgatgaaaaatcacactaataacaaacttgatgtgtg 18467076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 27910872 - 27910837
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaa 211  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27910872 tgttgtgaattcgatgaaaaatcacaccaataacaa 27910837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 36402170 - 36402217
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  36402170 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 36402217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 38960521 - 38960604
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| |   |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  38960521 aaaaactaaaacctccatcgtgccgcaaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 38960604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 21684294 - 21684339
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  21684294 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 21684339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 31543172 - 31543126
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| || ||||||||||||||||||||||||||||    
T  31543172 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtg 31543126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 34476894 - 34476939
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  34476894 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 34476939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 38882525 - 38882480
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  38882525 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 38882480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 4410442 - 4410413
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  4410442 aaaatcacaccaataacaacttgatgtgtg 4410413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 18186504 - 18186589
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacatt 316  Q
    |||||| ||||||||| |||||||||||||||  ||| |||| |||||||| |||| ||   |||||| ||||||| |||||||||    
T  18186504 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacttgattttaagttaactctcacatt 18186589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 27912973 - 27912928
Alignment:
Q  178 ttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||    
T  27912973 ttgtgaattcgatgaaaaatcccaccaataacaaacttgatgtgtg 27912928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 34479275 - 34479304
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  34479275 aaaatcacaccaataacaacttgatgtgtg 34479304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 20504369 - 20504452
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacga-ttatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||| |||||||||||||||  ||  ||||||||||| || |||| ||| ||||||| ||||||| |||||||    
T  20504369 aaaactaaaacctccaatcgtgccacgttgcccagctatcgtgccacgatttctgcagaac-ctgattttaagttaactctcaca 20504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 21684905 - 21684969
Alignment:
Q  250 gtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 21684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 21947853 - 21947770
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacga-ttatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||| ||||||||| ||||| |||||||||| ||| ||||||||||| || |||| ||| ||||||| ||||||| |||||||    
T  21947853 aaaactgaaacctccaatcgtgtcacgttgcctagccatcgtgccacgatttctgcagaac-ctgattttaagttaactctcaca 21947770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 35430618 - 35430586
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa 208  Q
    ||||||||||||| |||||||||||||||||||    
T  35430618 tgttgtgaattcgttaaaaaatcacaccaataa 35430586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 51015123 - 51015042
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctca 312  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||| |||| || |||||||| ||||||| |||||    
T  51015123 aaaaactgaaacctccatcgtgccacgttgccttgccatcatgccacgattctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 9176952 - 9177035
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  9176952 aaaaactaaaacctccatcgtgccacgttgcctaaccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 9177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 16932277 - 16932360
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  16932277 aaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 16932360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 9174604 - 9174684
Alignment:
Q  233 aaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  9174604 aaactaaaacctccatcgtgctacgttgcctagccgtcgtgccacgattctgcagaac-ctgattttaagttaactctcaca 9174684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 16934631 - 16934716
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacatt 316  Q
    ||||||||||||||||||||||||| ||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||||    
T  16934631 aaaaactaaaacctccatcgtgccatgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacatt 16934716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 37089830 - 37089906
Alignment:
Q  231 aaaaactaaaacctc-catcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    |||||||||||| || |||||||||||||||||||||| ||||||||||||| |||| || |||||||| |||||||    
T  37089830 aaaaactaaaacatctcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaa 37089906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 7941216 - 7941133
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  7941216 aaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 22783234 - 22783319
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacatt 316  Q
    ||||||||||||||||||||||||||||||||  ||  |||| |||||||| |||| ||  ||||||| ||||||| |||||||||    
T  22783234 aaaaactaaaacctccatcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcacatt 22783319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 44310696 - 44310813
Alignment:
Q  58 aaatcattcagatcagtagaatgcttaggggataaggagtttaaaagcagtctttgtttctactatcggtgttcgaggtggccgaaaactgcgtcggaag 157  Q
    |||| |||| ||||||||||| ||||||| ||||||||||| |||||  |||||  ||| | | ||| ||||||| |||||||| |||| |||||| |||    
T  44310696 aaattattcggatcagtagaaagcttaggtgataaggagttcaaaagtcgtcttgattttttcaatcagtgttcgtggtggccggaaacggcgtcgaaag 44310795  T
Q  158 gaggagagttcggcgaag 175  Q
    |||||||||  |||||||    
T  44310796 gaggagagtggggcgaag 44310813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 11434852 - 11434769
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||  ||| |||| |||||||| |||| ||  ||||||| ||||||| |||||||    
T  11434852 aaaaactgaaacctccatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 11437855 - 11437812
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgt 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11437855 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgt 11437812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 22780869 - 22780952
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||  |||| |||||||| |||| ||  ||||||| ||||||| |||||||    
T  22780869 aaaaactaaaacctccatcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 22780952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 16931631 - 16931677
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16931631 tgttgtgaattcgatgaaaaatcacaccaataacaacttaatgtgtg 16931677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 16933988 - 16934034
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16933988 tgttgtgaattcgatgaaaaatcacaccaataacaacttaatgtgtg 16934034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 22780212 - 22780258
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  22780212 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 22780258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 44599680 - 44599726
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  44599680 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 44599726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 47868894 - 47868848
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47868894 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 47868848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 2891781 - 2891733
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  2891781 gtgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 2891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 3937126 - 3937170
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtg 220  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||    
T  3937126 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtg 3937170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 6765335 - 6765288
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  6765335 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 6765288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16453796 - 16453749
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  16453796 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 16453749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16455714 - 16455667
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  16455714 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 16455667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 22046526 - 22046573
Alignment:
Q  176 tgttgtgaattcgata-aaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||    
T  22046526 tgttgtgaattcgatcgaaaaatcacaccaataacaacttgatgtgtg 22046573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 22802577 - 22802624
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  22802577 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 22802624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 2484715 - 2484760
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  2484715 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 2484760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 5637924 - 5638006
Alignment:
Q  232 aaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||| ||||||||||||||||||||||||  ||  |||||||||||||  ||| ||  ||||||| ||||||| |||||||    
T  5637924 aaaactgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 11006094 - 11006140
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||    
T  11006094 tgttgtgaattcgatcgaaaaacacaccaataacaacttgatgtgtg 11006140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 11008408 - 11008454
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||    
T  11008408 tgttgtgaattcgatcgaaaaacacaccaataacaacttgatgtgtg 11008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 18847644 - 18847598
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||    
T  18847644 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtg 18847598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 22782577 - 22782623
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||    
T  22782577 tgttgcgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 22782623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 11435438 - 11435401
Alignment:
Q  185 ttcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| |||||||||||||||||||||||||||||||    
T  11435438 ttcgatgaaaaatcacaccaataacaacttgatgtgtg 11435401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 14787272 - 14787321
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  14787272 agtgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 14787321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 11006705 - 11006781
Alignment:
Q  239 aaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcat-aactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||  ||  ||||||||||||| ||||| ||  ||||||| ||||||| |||||||    
T  11006705 aaacctccatcgtgccacgttgcccagcgatcgtgccacgattctgcataaaacctgattttaagttaactctcaca 11006781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 14633804 - 14633764
Alignment:
Q  182 gaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  14633804 gaattcgatgagaaatcacaccaataacaacttgatgtgtg 14633764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 24888666 - 24888598
Alignment:
Q  239 aaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    ||||||||| |||||||||||||||| ||| ||||||||| ||| |||| || |||||||| |||||||    
T  24888666 aaacctccaatcgtgccacgttgcctagccatcgtgccacaattctgcagaaatctgattttaagttaa 24888598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 36920050 - 36920125
Alignment:
Q  239 aaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||| |||||||||||||||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  36920050 aaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaac-ctgattttaagttaactctcaca 36920125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 38928023 - 38928071
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  38928023 gtgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 38928071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 9148728 - 9148681
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  9148728 gtgttgcgaattcgatgagaaaacacaccaataacaacttgatgtgtg 9148681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 14789273 - 14789320
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  14789273 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 14789320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 18709003 - 18709050
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  18709003 tgttgtgaatttgatgaaaaaaccacaccaataacaacttgatgtgtg 18709050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 24889286 - 24889239
Alignment:
Q  176 tgttgtgaattcgataaaaa-atcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  24889286 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtg 24889239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 27499536 - 27499489
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||    
T  27499536 tgttctgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 27499489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 36921338 - 36921385
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  36921338 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 36921385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 37089212 - 37089259
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  37089212 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 37089259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 38409697 - 38409650
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||| ||  |||| |||||||||||||||||||||||||    
T  38409697 gtgttgtgaattcaatcgaaaaacacaccaataacaacttgatgtgtg 38409650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 5198895 - 5198850
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||    
T  5198895 tgttgtgaattcgatgaaaa-tcacaccaataataacttgatgtgtg 5198850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 5635318 - 5635363
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  5635318 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 5635363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 8631260 - 8631305
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  8631260 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 8631305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 22048492 - 22048542
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgatt 281  Q
    ||||||| |||||||||||||||||||||||| | |  |||||||||||||    
T  22048492 aaaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgatt 22048542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 22132229 - 22132275
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| || ||||||||||||||||||||||||||||    
T  22132229 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtg 22132275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 22134457 - 22134503
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| || ||||||||||||||||||||||||||||    
T  22134457 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtg 22134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 24348692 - 24348647
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  24348692 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 24348647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 31849440 - 31849485
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  31849440 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 31849485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 49089044 - 49088998
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgt 221  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  49089044 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgt 49088998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 9176331 - 9176360
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  9176331 aaaatcacaccaataacaacttgatgtgtg 9176360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 17662108 - 17662137
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  17662108 aaaatcacaccaataacaacttgatgtgtg 17662137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 22800705 - 22800750
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtg 220  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||    
T  22800705 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtg 22800750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 24446502 - 24446551
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtgaa 224  Q
    ||||||||||||||| | ||| |||||||||||| |||||||||||||||    
T  24446502 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtgaa 24446551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 36919435 - 36919476
Alignment:
Q  182 gaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  36919435 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 36919476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 3578537 - 3578580
Alignment:
Q  181 tgaattcgataaaaaatcacaccaataacaacttgatgtgtgaat 225  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||    
T  3578537 tgaattcgttaaaaaatcacaccaataa-aacttgatgtgcgaat 3578580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 18311215 - 18311263
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataa-caacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  18311215 tgttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtg 18311263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 18409192 - 18409240
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataa-caacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  18409192 tgttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtg 18409240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 22295646 - 22295614
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa 208  Q
    ||||||||||||| |||||||||||||||||||    
T  22295646 tgttgtgaattcgttaaaaaatcacaccaataa 22295614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 26085816 - 26085863
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||| ||||||||| | || ||||||||||||||||||||||||||    
T  26085816 agtgttgcgaattcgatgagaa-tcacaccaataacaacttgatgtgtg 26085863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 47210655 - 47210683
Alignment:
Q  194 aaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||||||||||||||||    
T  47210655 aaatcacaccaataacaacttgatgtgtg 47210683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 1047420 - 1047503
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  1047420 aaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 1047503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 25542980 - 25542930
Alignment:
Q  172 gaagtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25542980 gaagtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 25542930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 1606828 - 1606781
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  1606828 gtgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 1606781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 20297810 - 20297764
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  20297810 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 20297764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 25276566 - 25276520
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  25276566 tgttgtgaattcgctaaaaaatcacaccaataacaacttgatgtgtg 25276520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 38394434 - 38394388
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  38394434 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 38394388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 20299910 - 20299862
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  20299910 agtgttgtgaatttgatgaaaaatcacaccaataacaacttgatgtgtg 20299862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 7349117 - 7349164
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7349117 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtg 7349164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 7351491 - 7351538
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7351491 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtg 7351538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 22137528 - 22137481
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||    
T  22137528 gtgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 22137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 40552555 - 40552508
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||    
T  40552555 gtgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 40552508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 9027034 - 9027080
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9027034 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 9027080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 11759575 - 11759529
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11759575 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 11759529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 28486013 - 28485967
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  28486013 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatatgtg 28485967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 31153691 - 31153737
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31153691 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 31153737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 40550277 - 40550231
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  40550277 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 40550231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 28488000 - 28487955
Alignment:
Q  177 gttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  28488000 gttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 28487955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 2935716 - 2935669
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtgaa 224  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  2935716 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtgaa 2935669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 3878398 - 3878322
Alignment:
Q  239 aaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||| |||||||||||||||  ||| ||||||||||||| |||| || |||||||| ||||||| |||||||    
T  3878398 aaacctccaatcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 2935153 - 2935070
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  2935153 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 9027604 - 9027687
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  9027604 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 13099317 - 13099364
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  13099317 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 13099364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 20626482 - 20626435
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  20626482 gtgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtg 20626435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 20630373 - 20630326
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  20630373 gtgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtg 20630326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 20642792 - 20642745
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  20642792 gtgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtg 20642745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 40837178 - 40837261
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| |||||||||||||||||||||| |   || ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  40837178 aaaaactgaaacctccatcgtgccacgttgtccgaccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 40837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 45012 - 44966
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||    
T  45012 tgttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtg 44966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 7469864 - 7469910
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  7469864 tgttgcgaattcgatgaaaaatcacaccaataacaatttgatgtgtg 7469910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 7471821 - 7471867
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||    
T  7471821 tgttgcgaattcaatgaaaaatcacaccaataacaacttgatgtgtg 7471867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 1046773 - 1046804
Alignment:
Q  191 aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||||    
T  1046773 aaaaaatcacaccaataacaacttgatgtgtg 1046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 22136961 - 22136878
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  22136961 aaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 22136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 40551988 - 40551905
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  40551988 aaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 40551905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 40836583 - 40836630
Alignment:
Q  176 tgttgtgaattcgata-aaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||    
T  40836583 tgttgcgaattcgatcgaaaaatcacaccaataacaacttgatgtgtg 40836630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 42223600 - 42223553
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  42223600 tgttgcgaattcgataaaaaaacacaccaataacaaacttgatgtgtg 42223553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 1502816 - 1502861
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||    
T  1502816 tgttgtgaattcaatgaaaa-tcacaccaataacaacttgatgtgtg 1502861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 1850429 - 1850383
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| |||||||||   |||||||||||||||||||||||||||||    
T  1850429 tgttgcgaattcgatttgaaatcacaccaataacaacttgatgtgtg 1850383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 48458100 - 48458055
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  48458100 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 48458055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 3036170 - 3036129
Alignment:
Q  178 ttgtgaattcgataaaaaatcacaccaataacaacttgatgt 219  Q
    ||||||||||||| | |||||||||||||||||| |||||||    
T  3036170 ttgtgaattcgatgagaaatcacaccaataacaatttgatgt 3036129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 21680472 - 21680423
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaa-cttgatgtgtgaa 224  Q
    ||||||||||||||| ||||  |||||||||||||| |||||||||||||    
T  21680472 tgttgtgaattcgatgaaaacccacaccaataacaagcttgatgtgtgaa 21680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 38397070 - 38397041
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  38397070 aaaatcacaccaataacaacttgatgtgtg 38397041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 36059 - 36031
Alignment:
Q  194 aaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||||||||||||||||    
T  36059 aaatcacaccaataacaacttgatgtgtg 36031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 4295788 - 4295828
Alignment:
Q  183 aattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  4295788 aattcgatgaaaaatcacaccaataacaaacttgatgtgtg 4295828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 24465975 - 24465943
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa 208  Q
    ||||||||||||||| |||||||||||||||||    
T  24465975 tgttgtgaattcgatgaaaaatcacaccaataa 24465943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 315
Target Start/End: Original strand, 27306685 - 27306768
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacat 315  Q
    |||||| ||||||||| ||||||||||||| |  ||| ||||||||||||| |||| ||| || |||| ||||||| ||||||||    
T  27306685 aaaactgaaacctccaatcgtgccacgttgtccagccatcgtgccacgattttgcaaaac-cttattttaagttaactctcacat 27306768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 19502467 - 19502542
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||  ||||||| |||||||    
T  19502467 aaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaa 19502542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 36560981 - 36561027
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  36560981 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 36561027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 45332020 - 45332066
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  45332020 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 45332066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 19504801 - 19504885
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcacat 315  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| |||| |||  ||  ||||||| ||||||| | ||||||    
T  19504801 aaaaattaaaacctccatcgtgccacgttgccttgccatcgtgccatgattctgctgaaacctgattttaagttaactttcacat 19504885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 27104598 - 27104523
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    ||||||| |||||||||||||||||||||||| | |  ||||||||||||| |||| || |||||||| |||||||    
T  27104598 aaaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattctgcagaaatctgattttaagttaa 27104523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 36558720 - 36558767
Alignment:
Q  175 gtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  36558720 gtgttgtgaattcgatgaaaaatcacaccaataataacttgatgtgtg 36558767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 36559275 - 36559358
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  36559275 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 36559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 45332592 - 45332675
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  45332592 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 11739421 - 11739467
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgt 221  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  11739421 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgt 11739467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19504178 - 19504223
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19504178 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 19504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 35215433 - 35215479
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||    
T  35215433 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtg 35215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 35217810 - 35217856
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||    
T  35217810 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtg 35217856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 42453890 - 42453845
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  42453890 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 42453845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 13909881 - 13909932
Alignment:
Q  173 aagtgttgtgaattcgat--aaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||| ||||||  ||||| ||||||||||||||||||||||||||    
T  13909881 aagtgttgtgacttcgatcgaaaaagtcacaccaataacaacttgatgtgtg 13909932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 17849528 - 17849480
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  17849528 tgttgtgaattcgatgaaaaaatcacaccaataacaaacttgatgtgtg 17849480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 19008051 - 19008003
Alignment:
Q  176 tgttgtgaattcgat-aaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  19008051 tgttgtgaattcgatgaaaaaatcacaccaataacaaacttgatgtgtg 19008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 45279848 - 45279888
Alignment:
Q  182 gaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  45279848 gaattcgatgagaaatcacaccaataacaacttgatgtgtg 45279888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 22874519 - 22874472
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa-caacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||    
T  22874519 tgttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtg 22874472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 24162063 - 24162110
Alignment:
Q  176 tgttgtgaattcgataaaaa-atcacaccaataacaacttgatgtgtg 222  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||    
T  24162063 tgttgtgaatacgatgaaaatatcacaccaataacaacttgatgtgtg 24162110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 24162669 - 24162752
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||| ||||||||||||||||||||||||   || | ||||||||||| |||| ||   |||||| ||||||| |||||||    
T  24162669 aaaaactgaaacctccatcgtgccacgttgcccaaccattgtgccacgattctgcagaaacttgattttaagttaactctcaca 24162752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 36561594 - 36561677
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    ||||||||||||||||||||||||  |  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  36561594 aaaaactaaaacctccatcgtgccgtgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 36561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 43623423 - 43623470
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  43623423 tgttgcgaattcgatgaaaaatcacaccaataactaacttgatgtgtg 43623470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19501843 - 19501888
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  19501843 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 19501888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 20146459 - 20146508
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataaca-acttgatgtgtgaa 224  Q
    ||||||||||||| | ||||||||||||||||| | ||||||||||||||    
T  20146459 tgttgtgaattcgttgaaaaatcacaccaataaaatacttgatgtgtgaa 20146508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 23452094 - 23452123
Alignment:
Q  193 aaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||    
T  23452094 aaaatcacaccaataacaacttgatgtgtg 23452123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 27105206 - 27105165
Alignment:
Q  182 gaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  27105206 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 27105165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 40032503 - 40032586
Alignment:
Q  232 aaaactaaaacctcca-tcgtgccacgttgccttgccctcgtgccacga-ttatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||| ||||||||| |||||||||||||||  ||| ||||||||||| || |||| ||| ||||||| ||||||| |||||||    
T  40032503 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatttctgcagaac-ctgattttaagttaactctcaca 40032586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 6646 - 6600
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  6646 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 6010 - 5927
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  6010 aaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 1294 - 1338
Alignment:
Q  178 ttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  1294 ttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtg 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 73468 - 73536
Alignment:
Q  239 aaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||| ||||||| |||||||| |||||||    
T  73468 aaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcataaatctgattttaagttaa 73536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 69757 - 69825
Alignment:
Q  239 aaacctcca-tcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaa 306  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||| |||| || |||||||| |||||||    
T  69757 aaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcagaaatctgattttaagttaa 69825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 22564 - 22518
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  22564 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 22518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 24839 - 24793
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  24839 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtg 24793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 21998 - 21915
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  21998 aaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 21915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 24273 - 24190
Alignment:
Q  231 aaaaactaaaacctccatcgtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  24273 aaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 24190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 475 - 427
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| | | |||||||||||||||||||||||||||||    
T  475 agtgttgtgaattcgttgagaaatcacaccaataacaacttgatgtgtg 427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 14231 - 14276
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  14231 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 14276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 15436 - 15393
Alignment:
Q  179 tgtgaattcgataaaaaatcacaccaataac-aacttgatgtgt 221  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  15436 tgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgt 15393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 41325 - 41370
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  41325 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 41370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 53 - 16
Alignment:
Q  185 ttcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||| |||||||||||||||||||||||||||||||    
T  53 ttcgatgaaaaatcacaccaataacaacttgatgtgtg 16  T

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Target: scaffold0370 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 1306 - 1339
Alignment:
Q  189 ataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||||||||||||||||||||||||||||    
T  1306 ataaaaaatcacaccaataacaacttgatgtgtg 1339  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000007; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 52458 - 52409
Alignment:
Q  174 agtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  52458 agtgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 52409  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 183488 - 183528
Alignment:
Q  182 gaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  183488 gaattcgatgagaaatcacaccaataacaacttgatgtgtg 183528  T

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Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 50457 - 50410
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  50457 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtg 50410  T

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Target: scaffold0250 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 3322 - 3280
Alignment:
Q  179 tgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    |||||||||||| |||| ||||||||||||||||||||||||||    
T  3322 tgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 3280  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 11315 - 11361
Alignment:
Q  177 gttgtgaattcgataaaaa-atcacaccaataacaacttgatgtgtg 222  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||    
T  11315 gttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtg 11361  T

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Target: scaffold0068 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 29616 - 29571
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataacaacttgatgtgtg 222  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  29616 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtg 29571  T

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Target: scaffold0068; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 29005 - 28941
Alignment:
Q  250 gtgccacgttgccttgccctcgtgccacgattatgcataactctgatttgaagttaaatctcaca 314  Q
    |||||||||||||  ||| ||||||||||||| |||| ||  ||||||| ||||||| |||||||    
T  29005 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 28941  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 79634 - 79584
Alignment:
Q  173 aagtgttgtgaattcgataaaaaatcacaccaataac-aacttgatgtgtg 222  Q
    |||||||| |||||| || |||||||||||||||||| |||||||||||||    
T  79634 aagtgttgcgaattcaatgaaaaatcacaccaataacaaacttgatgtgtg 79584  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 23340 - 23372
Alignment:
Q  176 tgttgtgaattcgataaaaaatcacaccaataa 208  Q
    ||||||||||||||| |||||||||||||||||    
T  23340 tgttgtgaattcgatcaaaaatcacaccaataa 23372  T

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