View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8260A_low_12 (Length: 511)

Name: NF8260A_low_12
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8260A_low_12
NF8260A_low_12
[»] chr7 (43 HSPs)
chr7 (96-362)||(41078704-41078972)
chr7 (390-511)||(41077599-41077720)
chr7 (19-106)||(41075337-41075424)
chr7 (138-314)||(32254987-32255164)
chr7 (143-316)||(41079784-41079954)
chr7 (143-314)||(32256344-32256513)
chr7 (138-276)||(43460765-43460903)
chr7 (143-319)||(47454330-47454504)
chr7 (138-315)||(13564181-13564358)
chr7 (202-320)||(35664287-35664405)
chr7 (138-314)||(22335977-22336153)
chr7 (187-315)||(47456366-47456494)
chr7 (146-312)||(11501180-11501344)
chr7 (184-314)||(22538836-22538966)
chr7 (138-227)||(40811405-40811494)
chr7 (202-313)||(45455378-45455489)
chr7 (182-321)||(47059099-47059238)
chr7 (201-318)||(33096863-33096980)
chr7 (201-316)||(6173455-6173570)
chr7 (138-315)||(11502363-11502541)
chr7 (146-314)||(43459453-43459619)
chr7 (202-318)||(32602927-32603043)
chr7 (202-321)||(30333276-30333395)
chr7 (143-314)||(40812562-40812731)
chr7 (152-315)||(22337329-22337489)
chr7 (162-316)||(30310117-30310270)
chr7 (231-314)||(30334672-30334755)
chr7 (138-313)||(40508377-40508551)
chr7 (138-289)||(47060419-47060568)
chr7 (146-316)||(13562818-13562986)
chr7 (138-319)||(22537552-22537733)
chr7 (138-286)||(40509677-40509824)
chr7 (202-286)||(4300054-4300138)
chr7 (138-286)||(22115107-22115254)
chr7 (356-392)||(41078655-41078691)
chr7 (137-199)||(43441460-43441520)
chr7 (138-322)||(3413522-3413705)
chr7 (258-320)||(40811332-40811394)
chr7 (96-137)||(40811528-40811569)
chr7 (201-298)||(45454052-45454149)
chr7 (248-323)||(30311521-30311596)
chr7 (138-195)||(2414863-2414918)
chr7 (248-316)||(33779136-33779204)
[»] scaffold1152 (1 HSPs)
scaffold1152 (145-315)||(2426-2594)
[»] chr3 (42 HSPs)
chr3 (145-319)||(53622655-53622830)
chr3 (137-323)||(38242457-38242643)
chr3 (137-315)||(3208481-3208659)
chr3 (184-317)||(18197142-18197275)
chr3 (138-314)||(10732071-10732247)
chr3 (143-316)||(40244183-40244353)
chr3 (143-315)||(38240903-38241072)
chr3 (143-326)||(27837906-27838086)
chr3 (184-289)||(34818109-34818214)
chr3 (159-315)||(53624326-53624480)
chr3 (145-319)||(10730878-10731050)
chr3 (202-316)||(50810840-50810954)
chr3 (202-316)||(50864910-50865024)
chr3 (138-315)||(53614215-53614392)
chr3 (138-296)||(12107921-12108083)
chr3 (202-317)||(50809416-50809531)
chr3 (202-317)||(50866331-50866446)
chr3 (145-317)||(26887506-26887676)
chr3 (138-269)||(27841652-27841783)
chr3 (138-316)||(35370909-35371081)
chr3 (145-322)||(41263628-41263803)
chr3 (184-276)||(53612907-53612999)
chr3 (162-286)||(53194837-53194960)
chr3 (138-276)||(53420352-53420490)
chr3 (200-305)||(38247480-38247585)
chr3 (143-276)||(35372108-35372238)
chr3 (185-276)||(40745455-40745546)
chr3 (260-298)||(10301882-10301920)
chr3 (202-315)||(36176512-36176626)
chr3 (202-320)||(37735298-37735416)
chr3 (202-311)||(18458663-18458772)
chr3 (138-313)||(34819227-34819401)
chr3 (204-276)||(37736089-37736161)
chr3 (138-314)||(41264595-41264771)
chr3 (200-276)||(53421765-53421841)
chr3 (263-298)||(10340036-10340071)
chr3 (202-317)||(23443463-23443578)
chr3 (201-311)||(41544663-41544773)
chr3 (96-137)||(28909475-28909516)
chr3 (201-286)||(40364345-40364430)
chr3 (182-315)||(53187556-53187688)
chr3 (248-316)||(3209983-3210051)
[»] scaffold0031 (2 HSPs)
scaffold0031 (138-313)||(125174-125350)
scaffold0031 (138-321)||(123960-124141)
[»] scaffold0077 (2 HSPs)
scaffold0077 (138-318)||(54126-54307)
scaffold0077 (145-289)||(52615-52757)
[»] chr5 (25 HSPs)
chr5 (143-315)||(325134-325304)
chr5 (138-298)||(27705258-27705418)
chr5 (137-315)||(22047729-22047908)
chr5 (138-312)||(39603853-39604028)
chr5 (138-315)||(30859113-30859291)
chr5 (138-318)||(30910735-30910916)
chr5 (200-317)||(34894144-34894261)
chr5 (151-289)||(39605426-39605562)
chr5 (211-317)||(34898966-34899072)
chr5 (138-299)||(8521268-8521427)
chr5 (200-305)||(24503191-24503296)
chr5 (145-289)||(30857823-30857965)
chr5 (146-314)||(30912114-30912280)
chr5 (138-316)||(33173903-33174080)
chr5 (138-316)||(1010308-1010484)
chr5 (138-318)||(22308742-22308921)
chr5 (200-298)||(24509040-24509138)
chr5 (182-319)||(22049122-22049259)
chr5 (137-226)||(15548323-15548413)
chr5 (255-313)||(41798006-41798064)
chr5 (260-299)||(32757838-32757877)
chr5 (138-195)||(1102736-1102791)
chr5 (138-195)||(4127196-4127251)
chr5 (262-316)||(10978345-10978399)
chr5 (245-299)||(20538066-20538120)
[»] chr8 (40 HSPs)
chr8 (138-320)||(32798474-32798656)
chr8 (137-315)||(44076303-44076482)
chr8 (137-314)||(45281130-45281306)
chr8 (141-286)||(42870839-42870985)
chr8 (163-298)||(4810483-4810619)
chr8 (138-316)||(32695216-32695395)
chr8 (143-317)||(42100055-42100227)
chr8 (138-315)||(13117575-13117752)
chr8 (138-317)||(42098558-42098737)
chr8 (143-316)||(13116326-13116497)
chr8 (147-289)||(32693853-32693993)
chr8 (202-318)||(28418800-28418916)
chr8 (137-297)||(22551022-22551180)
chr8 (201-319)||(26696525-26696643)
chr8 (145-286)||(45279706-45279845)
chr8 (184-315)||(17339537-17339668)
chr8 (138-316)||(42872133-42872309)
chr8 (146-311)||(41629709-41629872)
chr8 (202-315)||(28420180-28420293)
chr8 (205-314)||(32797136-32797245)
chr8 (138-276)||(8571559-8571697)
chr8 (202-315)||(17338038-17338151)
chr8 (138-209)||(42877722-42877791)
chr8 (200-314)||(8570116-8570230)
chr8 (137-315)||(30786673-30786851)
chr8 (200-313)||(211594-211707)
chr8 (200-313)||(240549-240662)
chr8 (200-313)||(725217-725330)
chr8 (200-313)||(793904-794017)
chr8 (260-316)||(38697070-38697126)
chr8 (159-289)||(26697797-26697925)
chr8 (202-276)||(6397819-6397893)
chr8 (138-195)||(24192606-24192661)
chr8 (96-137)||(34504542-34504583)
chr8 (96-137)||(45281056-45281097)
chr8 (231-299)||(17702310-17702378)
chr8 (184-276)||(30787588-30787680)
chr8 (138-176)||(38696443-38696481)
chr8 (96-137)||(26696709-26696750)
chr8 (138-198)||(31845738-31845795)
[»] chr1 (36 HSPs)
chr1 (138-332)||(41873914-41874107)
chr1 (138-315)||(45584950-45585128)
chr1 (145-317)||(49802846-49803016)
chr1 (138-318)||(15232746-15232926)
chr1 (141-289)||(15072736-15072883)
chr1 (143-295)||(27814309-27814460)
chr1 (187-324)||(46111479-46111616)
chr1 (138-297)||(16965068-16965228)
chr1 (173-314)||(52628850-52628991)
chr1 (148-298)||(50444651-50444800)
chr1 (192-319)||(15234037-15234164)
chr1 (138-315)||(16963831-16964006)
chr1 (138-286)||(35943390-35943537)
chr1 (137-320)||(49801609-49801792)
chr1 (211-315)||(52627512-52627617)
chr1 (137-315)||(14470853-14471030)
chr1 (213-316)||(34351973-34352076)
chr1 (138-315)||(23091348-23091525)
chr1 (201-317)||(15071337-15071453)
chr1 (201-289)||(44278354-44278442)
chr1 (201-316)||(24499660-24499775)
chr1 (248-299)||(51042394-51042445)
chr1 (143-253)||(46110341-46110449)
chr1 (138-318)||(15746709-15746888)
chr1 (183-289)||(44276145-44276251)
chr1 (138-226)||(44999405-44999492)
chr1 (138-314)||(14477734-14477909)
chr1 (138-289)||(48096975-48097124)
chr1 (260-299)||(20064189-20064228)
chr1 (138-204)||(34350219-34350286)
chr1 (138-176)||(9226158-9226196)
chr1 (138-176)||(13147359-13147397)
chr1 (202-315)||(41872573-41872686)
chr1 (96-137)||(44278247-44278288)
chr1 (200-276)||(16123323-16123399)
chr1 (263-299)||(20069954-20069990)
[»] chr2 (32 HSPs)
chr2 (138-316)||(29219381-29219560)
chr2 (138-316)||(29332680-29332859)
chr2 (145-314)||(17460635-17460802)
chr2 (138-319)||(18616947-18617129)
chr2 (138-319)||(6030412-6030593)
chr2 (138-298)||(11317310-11317470)
chr2 (137-315)||(43033079-43033255)
chr2 (148-314)||(17459251-17459418)
chr2 (141-299)||(11315946-11316102)
chr2 (185-320)||(28562798-28562933)
chr2 (142-315)||(32469145-32469319)
chr2 (185-318)||(18615510-18615643)
chr2 (185-314)||(29220865-29220994)
chr2 (185-314)||(29334164-29334293)
chr2 (138-298)||(42641803-42641962)
chr2 (153-315)||(7437718-7437880)
chr2 (143-321)||(32470524-32470700)
chr2 (145-320)||(1082980-1083153)
chr2 (202-298)||(43034477-43034573)
chr2 (200-316)||(6030601-6030717)
chr2 (202-313)||(34468957-34469068)
chr2 (143-241)||(6028787-6028884)
chr2 (203-298)||(28561382-28561477)
chr2 (233-319)||(7436460-7436546)
chr2 (138-314)||(1085330-1085504)
chr2 (138-226)||(11547745-11547834)
chr2 (231-299)||(2277504-2277572)
chr2 (203-319)||(44192453-44192569)
chr2 (138-299)||(34512827-34512985)
chr2 (260-318)||(34147130-34147188)
chr2 (96-137)||(6030337-6030378)
chr2 (248-300)||(21664815-21664867)
[»] chr4 (54 HSPs)
chr4 (138-298)||(52239891-52240051)
chr4 (138-315)||(2312423-2312601)
chr4 (138-298)||(6349494-6349655)
chr4 (143-321)||(393586-393763)
chr4 (141-318)||(6348149-6348324)
chr4 (138-318)||(7707582-7707763)
chr4 (188-316)||(4128989-4129117)
chr4 (138-311)||(27850880-27851047)
chr4 (138-316)||(11968507-11968685)
chr4 (138-298)||(1794425-1794586)
chr4 (184-317)||(2310918-2311051)
chr4 (145-289)||(40792774-40792914)
chr4 (159-314)||(1188841-1188995)
chr4 (187-316)||(1587178-1587307)
chr4 (182-320)||(37884263-37884401)
chr4 (211-316)||(24426335-24426440)
chr4 (143-297)||(1829768-1829921)
chr4 (202-298)||(37882848-37882944)
chr4 (138-321)||(42810146-42810328)
chr4 (159-316)||(10168746-10168903)
chr4 (185-315)||(42871092-42871222)
chr4 (138-286)||(52963595-52963741)
chr4 (183-314)||(390215-390346)
chr4 (200-315)||(1831267-1831382)
chr4 (182-293)||(27847697-27847808)
chr4 (152-317)||(1588044-1588210)
chr4 (205-319)||(42872308-42872422)
chr4 (200-317)||(10167420-10167537)
chr4 (159-296)||(44503643-44503778)
chr4 (201-315)||(31968397-31968511)
chr4 (138-315)||(23201843-23202020)
chr4 (138-315)||(15450017-15450194)
chr4 (145-314)||(23203904-23204071)
chr4 (143-276)||(52241105-52241235)
chr4 (92-136)||(15449938-15449982)
chr4 (184-320)||(54866619-54866754)
chr4 (137-321)||(33231380-33231564)
chr4 (137-317)||(50546901-50547081)
chr4 (201-289)||(31965858-31965946)
chr4 (202-314)||(44501516-44501628)
chr4 (146-319)||(7708740-7708913)
chr4 (159-276)||(33232663-33232777)
chr4 (201-276)||(50548228-50548303)
chr4 (138-295)||(53432079-53432235)
chr4 (200-314)||(1190196-1190310)
chr4 (96-137)||(7053384-7053425)
chr4 (202-286)||(54484338-54484423)
chr4 (231-299)||(669680-669748)
chr4 (247-315)||(4714016-4714084)
chr4 (145-176)||(2311088-2311119)
chr4 (138-176)||(19750237-19750275)
chr4 (138-176)||(19789531-19789569)
chr4 (138-195)||(56085465-56085520)
chr4 (263-299)||(3934309-3934345)
[»] scaffold0201 (1 HSPs)
scaffold0201 (202-315)||(21124-21237)
[»] chr6 (26 HSPs)
chr6 (141-315)||(23397301-23397473)
chr6 (138-316)||(5187564-5187742)
chr6 (203-315)||(15730036-15730149)
chr6 (138-319)||(23392207-23392388)
chr6 (137-298)||(7311666-7311826)
chr6 (184-316)||(17839127-17839259)
chr6 (138-316)||(29381672-29381850)
chr6 (138-323)||(17837605-17837790)
chr6 (184-314)||(232174-232303)
chr6 (184-320)||(5186560-5186696)
chr6 (143-314)||(29380189-29380358)
chr6 (137-315)||(18346691-18346869)
chr6 (201-315)||(6452516-6452630)
chr6 (202-314)||(6701378-6701490)
chr6 (216-315)||(34023883-34023982)
chr6 (184-314)||(6702859-6702988)
chr6 (187-292)||(34024055-34024160)
chr6 (138-316)||(32506969-32507146)
chr6 (200-299)||(2687243-2687342)
chr6 (201-316)||(2687929-2688044)
chr6 (143-313)||(7310275-7310443)
chr6 (201-315)||(6452281-6452395)
chr6 (247-315)||(233615-233683)
chr6 (138-226)||(12669809-12669896)
chr6 (244-286)||(27082192-27082234)
chr6 (159-311)||(29722664-29722814)
[»] scaffold0118 (2 HSPs)
scaffold0118 (138-299)||(43516-43678)
scaffold0118 (213-276)||(42443-42506)
[»] scaffold0034 (2 HSPs)
scaffold0034 (138-289)||(108536-108687)
scaffold0034 (151-316)||(109702-109865)
[»] scaffold0019 (1 HSPs)
scaffold0019 (137-320)||(63073-63255)
[»] scaffold1251 (1 HSPs)
scaffold1251 (260-318)||(1149-1207)
[»] scaffold0011 (1 HSPs)
scaffold0011 (138-317)||(127428-127606)
[»] scaffold0472 (1 HSPs)
scaffold0472 (182-227)||(731-776)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 96 - 362
Target Start/End: Complemental strand, 41078972 - 41078704
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagattatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  41078972 tagacatgcatgatctaacaatcatcttttaataaaaaagattatggtggaccatttttaagattggtccaccatatacatcatttgggttaaagttaac 41078873  T
Q  196 cgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgaggga 295  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41078872 cgtcgggatttattcggcaaatggaggaaaatctaaaggatcaaaagatactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgaggga 41078773  T
Q  296 ccaacggatctaataagcctaa--aaaatactagaataactattgatagaaagatcgaattttgtcaaa 362  Q
    ||| ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  41078772 ccagcggatctaataagcctaaaaaaaatactagaataactatttatagaaagatcgaattttgtcaaa 41078704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 390 - 511
Target Start/End: Complemental strand, 41077720 - 41077599
Alignment:
Q  390 tggttaaactattgatcaagtctaaagttaatggtttaactttttctaacgattactatctatgtagctttcaaccactcagattcttatgatggtttta 489  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41077720 tggttaaactattgatcaagtctaaagttaatggtttaattttttctaacgattactatctatgtagctttcaaccactcagattcttatgatggtttta 41077621  T
Q  490 catcctagttgattaccatttt 511  Q
    |||| |||||||||||||||||    
T  41077620 catcttagttgattaccatttt 41077599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 41075337 - 41075424
Alignment:
Q  19 aataatgtactactacatcacacactccctagtccccacctattaataaaattttaattattatcaacaaaaaacactagacatgcat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41075337 aataatgtactactacatcacacactccctagtccccacctattaataaaattttaattattatcaacaaaaaacactagacatgcat 41075424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 138 - 314
Target Start/End: Complemental strand, 32255164 - 32254987
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||  | |||||     
T  32255164 tatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcgggatttatttggcaaacggaggaaaaagtgagggat 32255065  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    ||||| |||| |||||| |||| |||||||||||| |||| | ||||||| ||||||||||||  ||| |||||||||    
T  32255064 caaaatgtacgttttattaattatgggaccaaaataaaaatttgaaattatttgagggaccaaatgatttaataagcc 32254987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 41079784 - 41079954
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||||||||  ||| ||||||||||| ||  || | |||||||||||| || ||||||||||  |||||||||||||||  |||||||||||||     
T  41079784 tggaccacttttaatgttgttccaccatagatat--ttggagttaaagttaacggtagggatttatttagcaaacggaggaaaagataagggaccaaaac 41079881  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||| |||||| | ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||    
T  41079882 gtacgttttatta-ttgtgggaccaaaataaaaaatggaaattaattgagggaccaatggatataataaaccta 41079954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 314
Target Start/End: Original strand, 32256344 - 32256513
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||||||||  ||||||||||||||||||  ||   |||||||||||| || || ||||||| |||||| |||||||||  | ||||||||||||    
T  32256344 tggaccacttttaatgttggtccaccatagacat--ttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaaag 32256441  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||| |||||| |||| ||||||||||||||||| | ||||||| |||||||||||  ||||| ||||||||    
T  32256442 gtacattttattaattatgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagcc 32256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 43460765 - 43460903
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| ||||| ||  ||||||||| |||||| |||||||||  | ||||||     
T  43460765 tatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactgtgaggatttatttggcaaatggaggaaaaagtgagggact 43460864  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||| |||| |||||| ||||||||||||||||||||||    
T  43460865 aaaatgtacgttttattaattgtgggaccaaaatgaaaa 43460903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 319
Target Start/End: Complemental strand, 47454504 - 47454330
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||| ||||| |||||| |||||||||||  || | |||||||||||  ||||||||||||| |||||||| || ||||  | |||||||||||     
T  47454504 tggaccactcttaaggttggtctaccatagacat--ttagagttaaagttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaat 47454407  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
    |||| |||||| |||||||||||||||||||||  | ||||||| |||||||||||  ||||| |||||||| ||||    
T  47454406 gtacgttttattaattgtgggaccaaaatgaaagcttgaaattatttgagggaccactggatcaaataagccaaaaa 47454330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 13564181 - 13564358
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| |||||  || |||||||||||||| ||||||| ||||| ||||| ||||||||||||| ||||||||||||||||| | ||||||    
T  13564181 tatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gtcgggatttatttggcaaacggaggaaaatgtgagggac 13564279  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
     |||| |    |||||| ||||||||||||||||||||||   |||||||| | |||||| ||  ||||||||||||||    
T  13564280 taaaacgccagttttattaattgtgggaccaaaatgaaaacaagaaattaaataagggactaaatgatctaataagcct 13564358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 35664287 - 35664405
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    ||||| || |||||||||||  ||| |||||||||||||||||| ||||||| | || ||||| |||||||||||||||||||||||| ||||| ||| |    
T  35664287 gatttttttggcaaacggagataaaactaagggaccaaaaggtattttttattacttatgggatcaaaatgaaaaatggaaattaattaagggatcaatg 35664386  T
Q  302 gatctaataagcctaaaaa 320  Q
    |||||||||||||||||||    
T  35664387 gatctaataagcctaaaaa 35664405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 138 - 314
Target Start/End: Complemental strand, 22336153 - 22335977
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||||||| ||||| |||||  |||||||||||| ||||||| ||||||||  | ||||||    
T  22336153 tatggtggaccacttttaaggttgatccaccatag-catcatttggggttaaacttaacattcgggatttatttggcaaactgaggaaaaggtgagggac 22336055  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||    
T  22336054 taaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaaaagatctaataagcc 22335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 47456366 - 47456494
Alignment:
Q  187 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    ||||||||| |||| |||||||| ||||||| || |||||  | ||||||||||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  47456366 aaagttaacagtcgagatttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 47456465  T
Q  287 attgagggaccaacggatctaataagcct 315  Q
     |||||||||||  ||||| |||||||||    
T  47456466 tttgagggaccattggatcaaataagcct 47456494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 312
Target Start/End: Complemental strand, 11501344 - 11501180
Alignment:
Q  146 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 245  Q
    |||||||||||| ||||||||||||||||||  ||   |||||||||||| ||||||||||||| |||||| |||||||||  | |||||| |||| |      
T  11501344 accacttttaaggttggtccaccatagacat--ttgaagttaaagttaacagtcgggatttatttggcaaatggaggaaaaggtgagggactaaaatgct 11501247  T
Q  246 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataag 312  Q
     ||||||| || |||||||||||||||||||   |||||||||| | |||||||  |||||||||||    
T  11501246 atttttattaactgtgggaccaaaatgaaaacatgaaattaattaaaggaccaaacgatctaataag 11501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 22538836 - 22538966
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    ||||||||||||||||| |||||||| ||||||||||||||||  | |||||| |||| ||  ||||||| |||||||||||||||| |||||   ||||    
T  22538836 gttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaacatgaaa 22538935  T
Q  284 ttaattgagggaccaacggatctaataagcc 314  Q
    |||| | |||||||||  |||||||||||||    
T  22538936 ttaaataagggaccaaacgatctaataagcc 22538966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 40811494 - 40811405
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaat 227  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||  | | ||||||||||||    
T  40811494 tatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcaggatttatttagtatacggaggaaaat 40811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 45455378 - 45455489
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||| ||||  | ||||| ||||| |||| |||||| |||||||||||||||||||||| | |||||||||| |||||||| ||    
T  45455378 gatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttgaaattaattaagggaccatcg 45455477  T
Q  302 gatctaataagc 313  Q
    |||| |||||||    
T  45455478 gatcaaataagc 45455489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 182 - 321
Target Start/End: Complemental strand, 47059238 - 47059099
Alignment:
Q  182 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 281  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||||||  | ||||| ||||| |||| |||||| |||||| ||||||||||||||| |  |    
T  47059238 gggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtacattttattaattgtaggaccaaaatgaaaacttaa 47059139  T
Q  282 aattaattgagggaccaacggatctaataagcctaaaaaa 321  Q
    ||||||||  |||||||  | |||||||||||| ||||||    
T  47059138 aattaattaggggaccattgaatctaataagcccaaaaaa 47059099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 33096980 - 33096863
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| ||||||||||||||||  | |||||||||||||||  |||||| ||||||||| | ||||||| || | ||||||| |||||||||||      
T  33096980 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccatt 33096881  T
Q  301 ggatctaataagcctaaa 318  Q
    ||||| ||||||||||||    
T  33096880 ggatcaaataagcctaaa 33096863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 6173455 - 6173570
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||| ||||  ||||||||||| | ||||||| |||||||||||      
T  6173455 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggaccatt 6173554  T
Q  301 ggatctaataagccta 316  Q
    ||||| ||||||||||    
T  6173555 ggatcaaataagccta 6173570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 11502363 - 11502541
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| |||||| ||||||||||| ||||| ||||||| ||||| || |||||||||| ||||||| ||| ||||  | ||||||    
T  11502363 tatggtggaccactcttaaggttggtctaccatagacatcatttgaggttaaacttaactgttgggatttatttggcaaacagagcaaaagttgagggac 11502462  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
     ||   | | ||||||| || ||||||| |||||||||||   ||||||| || | |||||||  ||||||||||||||    
T  11502463 taattcgcaatttttattaaatgtgggatcaaaatgaaaacatgaaattagttaaaggaccaaacgatctaataagcct 11502541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 314
Target Start/End: Complemental strand, 43459619 - 43459453
Alignment:
Q  146 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 245  Q
    |||| ||||||| ||| ||||||||||||||  || | |||||| ||||| | || |||||||| ||||||||||||||||  | ||||||  ||| | |    
T  43459619 accatttttaaggttgatccaccatagacat--ttggagttaaacttaacagccgagatttatttggcaaacggaggaaaacatgagggacttaaacgca 43459522  T
Q  246 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    | |||||| |||||||||||||||||||||| | ||||||| ||  ||||| || ||||| ||||||||    
T  43459521 cgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggactaatggatcaaataagcc 43459453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 32603043 - 32602927
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||| ||||  | |||||| |||| |||| |||||| |||| |||||||||||| |||| | ||||||| |||| ||||||| |    
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaatg 32602944  T
Q  302 gatctaataagcctaaa 318  Q
    |||| ||||||||||||    
T  32602943 gatcaaataagcctaaa 32602927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 30333395 - 30333276
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| | ||||||||| ||||  | |||||||||||| ||| |||||| |||||||||||||||||||||| | ||||||| ||  |||||||| |    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatg 30333296  T
Q  302 gatctaataagcctaaaaaa 321  Q
     ||||| ||||| |||||||    
T  30333295 aatctattaagcttaaaaaa 30333276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 314
Target Start/End: Original strand, 40812562 - 40812731
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 241  Q
    |||| |||||||||| |||||||||||| |   | |||||| |||||||| ||| |||||||| |||| | ||||| ||||||||| | ||||| |||||    
T  40812562 tggatcacttttaaggttggtccaccatgg---ttatttggagttaaagtaaacagtcgggatatatttgacaaacagaggaaaatatgagggagcaaaa 40812658  T
Q  242 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
     |||| |||||| |||| ||| |||||||||||||   |||||||| | ||||| |||  |||||||||||||    
T  40812659 cgtacgttttattaattatggaaccaaaatgaaaacatgaaattaaataagggatcaaacgatctaataagcc 40812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 315
Target Start/End: Original strand, 22337329 - 22337489
Alignment:
Q  152 tttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtacttttt 251  Q
    |||||| ||||||||||||||||||  ||   |||||| ||||| ||| ||||||||| ||||||||||||||||| ||||||||  || |  | |||||    
T  22337329 tttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcaggatttatttggcaaacggaggaaaatgtaagggactgaatgcca-ttttt 22337425  T
Q  252 atcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    || |||||||||| |||||||||||   |||| ||| | |||||||||   |||||||||||||    
T  22337426 attaattgtgggatcaaaatgaaaacatgaaactaaataagggaccaaacaatctaataagcct 22337489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 316
Target Start/End: Complemental strand, 30310270 - 30310117
Alignment:
Q  162 gtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgt 260  Q
    |||||||||||||||  || |||||||  ||||| ||| |||||||||| ||||||||||||||||  | ||| ||  ||| |||| |||||| ||||||    
T  30310270 gtccaccatagacat--ttggggttaactttaacagtctgggatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgt 30310173  T
Q  261 gggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    ||||| |||||||||| | ||||||| || |||||| |  ||||| ||||||||||    
T  30310172 gggacaaaaatgaaaacttgaaattatttaagggactattggatcaaataagccta 30310117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 30334672 - 30334755
Alignment:
Q  231 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| | ||||||| ||  |||||||| ||||||| ||||||    
T  30334672 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattagttaggggaccaatggatctattaagcc 30334755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 313
Target Start/End: Complemental strand, 40508551 - 40508377
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||| ||| ||||||||| ||||||||||||||  || || ||||| ||||| |    ||||||||| ||| ||||||||||||  | ||||||    
T  40508551 tatggtggacaactcttaagattgatccaccatagacat--ttgggattaaacttaacaccgaaggatttatttggctaacggaggaaaaagtgagggac 40508454  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 313  Q
      ||| |||| |||||| ||||||||||| |||||||||| | ||||||| ||  |||||||  ||||| |||||||    
T  40508453 ttaaacgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaggggaccattggatcaaataagc 40508377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 138 - 289
Target Start/End: Original strand, 47060419 - 47060568
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||| | | ||||| ||||||||||||| ||||  || | |||||| ||||| ||| ||||||||| ||||||||||  |||   | |||||||    
T  47060419 tatggtggactattcttaaggttggtccaccatatacat--ttggtgttaaacttaacagtccggatttatttggcaaacggaaaaaagggtgagggacc 47060516  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    |||| |||| |||||| |||| | ||||||||||||||| |  |||||||||    
T  47060517 aaaacgtacgttttattaattataggaccaaaatgaaaacttaaaattaatt 47060568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 316
Target Start/End: Complemental strand, 13562986 - 13562818
Alignment:
Q  146 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 245  Q
    |||||||||||| ||||||||  ||||||||  ||   ||||||||||||  |||||||||||| || |||| ||| ||||| | |||||| |||| |      
T  13562986 accacttttaaggttggtccattatagacat--ttgaagttaaagttaacaatcgggatttatttggtaaacagagaaaaatgtgagggactaaaacgcc 13562889  T
Q  246 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
     ||||||| | ||||||||||||||| ||||   |||||||| | |||||| ||  |||||||||||||||    
T  13562888 atttttattacttgtgggaccaaaataaaaacaagaaattaaataagggactaaacgatctaataagccta 13562818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 319
Target Start/End: Complemental strand, 22537733 - 22537552
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||| |||| ||||| ||||| |||| || |||| ||||| ||||||| ||||| || || ||||||| ||||||| |||  |||  | |||||     
T  22537733 tatggtggatcactattaaggttggttcaccgtaaacatcatttgaggttaaaattaacagttgg-atttatttggcaaacagagacaaacgtgagggat 22537635  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
    ||||| ||  ||||||  ||||||||||||||||||||||    ||||||| | ||||| |||  ||||||||||||||||||    
T  22537634 caaaatgtcatttttagtaattgtgggaccaaaatgaaaatataaaattaaataagggagcaaacgatctaataagcctaaaa 22537552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 286
Target Start/End: Original strand, 40509677 - 40509824
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||||||||| ||||||||  || |||||||| ||||| |     |||||||| || |||||||||||||  | ||| ||    
T  40509677 tatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacaccgaatgatttatttggtaaacggaggaaaaagtgaggaac 40509774  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
      ||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  40509775 ttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 40509824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 4300054 - 4300138
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    |||||||| ||||||| ||||||||  | ||||||  ||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  4300054 gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 4300138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 286
Target Start/End: Original strand, 22115107 - 22115254
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||||||||| ||||||||  || |||||||| ||||| |     |||||||| ||  ||||||||||||  | ||| ||    
T  22115107 tatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacaccgaangatttatttggtnaacggaggaaaaagtgaggaac 22115204  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
      ||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  22115205 ttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 22115254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 41078691 - 41078655
Alignment:
Q  356 tgtcaaattatataagaaagttataggtgatgagtgg 392  Q
    |||||||||||||||||||||||||||||||||||||    
T  41078691 tgtcaaattatataagaaagttataggtgatgagtgg 41078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 43441520 - 43441460
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc 199  Q
    ||||||||||||||| ||||| ||||| ||||||||||||  || ||||||||||||||||||    
T  43441520 ttatggtggaccactcttaaggttggtacaccatagacat--ttagggttaaagttaaccgtc 43441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 322
Target Start/End: Complemental strand, 3413705 - 3413522
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||| ||| ||||||||| ||||||||||||||   |   |||||| ||||| ||  |||||||||| ||||||| ||| ||||  | ||||||    
T  3413705 tatggtggacaactcttaagattgatccaccatagacatc--tgaagttaaacttaacagttagggatttatttggcaaacagagtaaaaggtgagggac 3413608  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaat 322  Q
     |||| |   ||||||| |||||| |||||||||||||||   ||||||| ||   |||||||  ||||||||||||| |||||||    
T  3413607 taaaacgccatttttattaattgtaggaccaaaatgaaaacacgaaattatttagaggaccaaacgatctaataagccaaaaaaat 3413522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 40811394 - 40811332
Alignment:
Q  258 tgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 320  Q
    ||||||||||||||||||| | ||||||| |||||||||||  ||||| ||||||||| ||||    
T  40811394 tgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagccttaaaa 40811332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 40811569 - 40811528
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  40811569 tagacattcatgatctaacaattatcttttaataaaaaagat 40811528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 45454149 - 45454052
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    ||||||||| ||||||||||||||||  | |||||| |||| |||  |||||| |||| || ||||||||||||||   ||||||||||  |||||||    
T  45454149 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggacca 45454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 30311521 - 30311596
Alignment:
Q  248 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaata 323  Q
    |||||| |||||||||||||||||||||| | ||||||| ||  ||||| || ||||| |||||||| | ||||||    
T  30311521 ttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaatggatcaaataagccaataaaata 30311596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 2414918 - 2414863
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 195  Q
    |||||||||||||||||||| ||||||||  ||||||||  || ||||||||||||||    
T  2414918 tatggtggaccacttttaaggttggtccattatagacat--ttggggttaaagttaac 2414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 33779136 - 33779204
Alignment:
Q  248 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||||| ||||||||| |||||||||||| | ||||||| ||  ||||| || ||||| ||||||||||    
T  33779136 ttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataagccta 33779204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 145 - 315
Target Start/End: Original strand, 2426 - 2594
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||||||||||||  ||||| || | |||||||||||| ||||| ||||||| || |||| |||||||| |||||||||||||||||    
T  2426 gaccacttttaaggttggtccaccatt-acatatttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaactaagggaccaaaaggt 2524  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  2525 actttttattaattgtgggaccaaaatg-aaaatggaaattaattgagggaccaattgatctaataagcct 2594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 53622830 - 53622655
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaagg 243  Q
    ||||||| ||||| |||||||||||||||||| ||||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||| |||||      
T  53622830 gaccactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaata 53622731  T
Q  244 tactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
    || ||||||| ||||||| |||||||||||| |||| |||||||| ||||||| || |||||||||||||||||||    
T  53622730 tattttttattaattgtgcgaccaaaatgaataatgaaaattaatcgagggacgaatggatctaataagcctaaaa 53622655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 137 - 323
Target Start/End: Original strand, 38242457 - 38242643
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||| |||||| ||||| ||  ||||||||| ||||||| ||  ||||  | ||||||    
T  38242457 ttatggtggaccactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggac 38242556  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaata 323  Q
    |||||||||| |||||| |||||||||| ||||||||||| | ||||||| ||||||||||   | ||| |||||||||||| ||||    
T  38242557 caaaaggtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggacctttgaatcaaataagcctaaataata 38242643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 137 - 315
Target Start/End: Complemental strand, 3208659 - 3208481
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||||||||| ||||| ||||||||||||| | || ||||||| ||||| ||||| ||  ||||||||| | ||||||||||||||  |||||||    
T  3208659 ttatggtggaccactcttaaggttggtccaccata-atatcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataaggga 3208561  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
     ||||| |||| |||||| |||| ||||||||||||||||||||||||||||||   ||||||| ||||  |||||||||    
T  3208560 tcaaaacgtacgttttattaattatgggaccaaaatgaaaaatggaaattaattagaggaccaatggattaaataagcct 3208481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 18197275 - 18197142
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||  | |||||||||||||||| |||||| |||||||||||||||||||||| | ||||    
T  18197275 gttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaa 18197176  T
Q  284 ttaattgagggaccaacggatctaataagcctaa 317  Q
    ||| |||||||||    ||||| |||||||||||    
T  18197175 ttatttgagggacatttggatcaaataagcctaa 18197142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 10732071 - 10732247
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    ||||||||||| || | ||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||| || |||||||||||||| | ||||||     
T  10732071 tatggtggaccgctctaaaggttggtccaccatagacatcatttgggttaaacttaaccgtcggaatttatttggtaaacggaggaaaatgtgagggact 10732170  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||| |   ||||||| |||| |||||||||||||||||    ||||||| | ||||| |||  |||||||||||||    
T  10732171 aaaacgccatttttattaattatgggaccaaaatgaaaacaataaattaaataagggatcaaacgatctaataagcc 10732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 143 - 316
Target Start/End: Complemental strand, 40244353 - 40244183
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||||||||| |||||||||||||||||   ||   |||||||||||| |||   ||| ||| ||||||||||||||||| | |||||||||||     
T  40244353 tggaccacttttaagtttggtccaccatagacac--ttgaagttaaagttaactgtcaaaatt-atttggcaaacggaggaaaatttgagggaccaaaat 40244257  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||| |||||| ||||||| |||||||||||||| | ||||||| || ||||||||| ||||| ||||||||||    
T  40244256 gtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttaagggaccaatggatcaaataagccta 40244183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 315
Target Start/End: Complemental strand, 38241072 - 38240903
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||| ||||||| ||||| ||||||||||||  || | |||||| ||||| | ||||||||||| ||||||||||||||||||| | ||||  |||     
T  38241072 tggaccatttttaag-ttggttcaccatagacat--ttggagttaaacttaacagccgggatttatttggcaaacggaggaaaatctgaaggacttaaac 38240976  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||| |||||| ||||||||||||||||| |||| | ||||||| |  ||||||||| ||||| |||||||||    
T  38240975 gtacgttttattaattgtgggaccaaaataaaaatttgaaattattcaagggaccaatggatcaaataagcct 38240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 143 - 326
Target Start/End: Complemental strand, 27838086 - 27837906
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    |||||||||||||| ||||||| |||||||||||   |||   | |||||||| ||| ||||||||| ||||||||||||||||  | |||||| ||||     
T  27838086 tggaccacttttaaaattggtctaccatagacat---ttgaagttaagttaacagtcaggatttatttggcaaacggaggaaaaggtgagggactaaaac 27837990  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaatacta 326  Q
    |   | ||||| ||||||||||||||||||||||   |||||||| | ||||| |||  |||||||||| |||| |||||||||    
T  27837989 gccatatttattaattgtgggaccaaaatgaaaacatgaaattaaataagggatcaaacgatctaataaacctagaaaatacta 27837906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 34818214 - 34818109
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    ||||||||||||  | |||||||||| |||||| |||||||||||| ||||||||||   ||| |||||| |||||||||||||||||||||| | ||||    
T  34818214 gttaaagttaactattgggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaatgaaaacttgaaa 34818115  T
Q  284 ttaatt 289  Q
    ||||||    
T  34818114 ttaatt 34818109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 159 - 315
Target Start/End: Original strand, 53624326 - 53624480
Alignment:
Q  159 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 258  Q
    ||||||||||||| ||||  || ||||||||  |||||||| ||||||||| ||||||| ||| ||||  | || |||||||| |||| |||||| ||||    
T  53624326 ttggtccaccatatacat--ttggggttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaatt 53624423  T
Q  259 gtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    ||| || ||||||||||| | ||||||| |||||||||||  ||||| |||||||||    
T  53624424 gtgagatcaaaatgaaaacttgaaattatttgagggaccattggatcaaataagcct 53624480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 10731050 - 10730878
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||||| ||||||||||||  ||   |||||||||||| ||||||||||||| ||||||||||| ||||  | | ||||||||| |     
T  10731050 gaccacttttaaggttggttcaccatagacat--ttgaagttaaagttaacagtcgggatttatttggcaaacggagaaaaaagtgaaggaccaaaatgc 10730953  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
      ||||||| |||| |||||||||||||||||   |||||| | | ||||| |||  |||| |||||||||||||    
T  10730952 catttttattaattatgggaccaaaatgaaaacaagaaattgaataagggatcaaacgatccaataagcctaaaa 10730878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 50810840 - 50810954
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  50810840 gatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 50810939  T
Q  302 gatctaataagccta 316  Q
    |||||| ||||||||    
T  50810940 gatctattaagccta 50810954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 50865024 - 50864910
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  50865024 gatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 50864925  T
Q  302 gatctaataagccta 316  Q
    |||||| ||||||||    
T  50864924 gatctattaagccta 50864910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 53614215 - 53614392
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| |||||  || |||||||||||||| ||||||| ||||| ||||| | | ||||||||| ||||||  ||||||||| | ||||||    
T  53614215 tatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gcctggatttatttggcaaatagaggaaaatgtgagggac 53614313  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
     |||| |    |||||| ||||||||||||||||| ||||   |||||||| | |||||||||  ||||||||||||||    
T  53614314 taaaacgccagttttattaattgtgggaccaaaataaaaacaagaaattaaataagggaccaaacgatctaataagcct 53614392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 12107921 - 12108083
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattc---ggcaaacggaggaaaatctaagg 233  Q
    |||||||||||||||||||| ||||||||||||| | || ||||||| ||||| |||||   || ||||||||    ||||||||||||||||  | |||    
T  12107921 tatggtggaccacttttaaggttggtccaccataaatatcatttggggttaaatttaacacccgtgatttattatttggcaaacggaggaaaaagtgagg 12108020  T
Q  234 gaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggac 296  Q
    ||||||||  ||  |||||| | |||||||||||||||||||| | ||||||| || ||||||    
T  12108021 gaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggac 12108083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 50809531 - 50809416
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || |||||||||      
T  50809531 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaata 50809432  T
Q  302 gatctaataagcctaa 317  Q
    |||||| |||||||||    
T  50809431 gatctattaagcctaa 50809416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 50866331 - 50866446
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || |||||||||      
T  50866331 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaata 50866430  T
Q  302 gatctaataagcctaa 317  Q
    |||||| |||||||||    
T  50866431 gatctattaagcctaa 50866446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 317
Target Start/End: Original strand, 26887506 - 26887676
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||||| ||||||||| ||  ||   |||||||||||||||| | ||||||| || |||| ||||||||  | |||||| |||  |     
T  26887506 gaccacttttaaggttggtacaccatagatat--ttgaagttaaagttaaccgtcagaatttatttgggaaacagaggaaaagatgagggactaaattgc 26887603  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 317  Q
      ||||||| ||||||||||| ||||||||||   |||||||| | |||||||||  ||||||||||||||||    
T  26887604 catttttattaattgtgggacaaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctaa 26887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 138 - 269
Target Start/End: Original strand, 27841652 - 27841783
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||| | ||||| |||||| |||| ||||||| | |||||| | |||||  | | ||||     
T  27841652 tatggtggaccactcttaaggttggtccaccataaacataatttagattaaacttaaccatcggaatttatttgacaaacgaaagaaaaggtgaaggact 27841751  T
Q  238 aaaaggtactttttatcaattgtgggaccaaa 269  Q
    |||| |   ||||||| |||||||||||||||    
T  27841752 aaaaagctatttttattaattgtgggaccaaa 27841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 138 - 316
Target Start/End: Complemental strand, 35371081 - 35370909
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||| |||| |||||||||      |||| | ||||| ||||||||  | | ||||     
T  35371081 tatggtggaccactcttaaggttggtccaccataaacatcatttgggctaaacttaaccgtc------tatttgacaaacagaggaaaaggtgaaggact 35370988  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    ||||     ||||||| |||||||||| |||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  35370987 aaaacaccatttttattaattgtgggatcaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccta 35370909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 41263803 - 41263628
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||| ||||||||||| ||  || | ||||||||||||  | |||||||| | | ||||||||| ||||  | | ||||||||| |     
T  41263803 gaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttgggatttaattgacaaacggagaaaaagatgacggaccaaaatgc 41263706  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaat 322  Q
      ||||||  || |||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||| |||||    
T  41263705 catttttaataaatgtgggaccaaaatgaaaatatgaaattaaataagggaccaaacgatctaataagcctataaaat 41263628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 53612999 - 53612907
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||| | |||||  |||| |   ||||||| |||| |||||||||||||||||    
T  53612999 gttaaagttaacggtcgggatttatttggcaaacagaggaaaatgtgagggaataaaacgccatttttattaattatgggaccaaaatgaaaa 53612907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 53194837 - 53194960
Alignment:
Q  162 gtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgt 260  Q
    |||||||||||||||  |||| |||||| ||||| | |  ||||||||| ||||||  ||||||||  | ||||||||||| |||| |||||| |||| |    
T  53194837 gtccaccatagacat--tttgagttaaacttaacagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattat 53194934  T
Q  261 gggaccaaaatgaaaaatggaaatta 286  Q
    |||||||||||||||| | |||||||    
T  53194935 gggaccaaaatgaaaacttgaaatta 53194960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 53420490 - 53420352
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||| |||||||||  ||||||||||||||||||  ||  ||||||| ||||  | |  |||||||||| |  |||||||| ||||  | |||||    
T  53420490 tatggtggatcacttttaaagttggtccaccatagacat--ttgtggttaaacttaatagactagggatttatttgataaacggagaaaaaagtgaggga 53420393  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||||| |||| |||||| |||||| |||||||||||||||    
T  53420392 ccaaaacgtacgttttattaattgtaggaccaaaatgaaaa 53420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 305
Target Start/End: Original strand, 38247480 - 38247585
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||||| || ||||||||| |  ||| |||||| ||||||| |||| |||||| | || |  |||||||||||||| |||||||||||| |||||||||    
T  38247480 gggatttttttggcaaacggtgtgaaaactaaggaaccaaaatgtacgttttattacttatatgaccaaaatgaaaattggaaattaattaagggaccaa 38247579  T
Q  300 cggatc 305  Q
     |||||    
T  38247580 tggatc 38247585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 276
Target Start/End: Original strand, 35372108 - 35372238
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    |||||||||||||| ||||||||| |||||||||   |||   | |||||||| ||  ||||||||| ||||||| ||||||||  | |||||| ||||     
T  35372108 tggaccacttttaaaattggtccaacatagacat---ttgaagttaagttaacagtaaggatttatttggcaaacagaggaaaaggtgagggactaaaac 35372204  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |   ||||||| ||||||| ||||||||||||||    
T  35372205 gccatttttattaattgtgagaccaaaatgaaaa 35372238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 40745455 - 40745546
Alignment:
Q  185 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    ||||||||||| |||  ||||||||  ||||||  |||||||||| ||||| ||||| | |  |||||||||||||| ||||||||||||||    
T  40745455 ttaaagttaacggtcaagatttattttgcaaacaaaggaaaatctgagggatcaaaacgaaagttttatcaattgtgagaccaaaatgaaaa 40745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 10301882 - 10301920
Alignment:
Q  260 tgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  10301882 tgggaccaaaatgaaaaatggaaattagttgagggacca 10301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 36176512 - 36176626
Alignment:
Q  202 gatttattcggcaaacggaggaaaatc-taagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    |||||||| ||||||| ||||||||   | |||||||||||  ||| |||||| ||||||||||||||||||||||   |||||||||   |||||||      
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggaccatt 36176611  T
Q  301 ggatctaataagcct 315  Q
    ||||| |||||||||    
T  36176612 ggatcaaataagcct 36176626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 320
Target Start/End: Complemental strand, 37735416 - 37735298
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| | |||||| || ||||  | |||||| ||||  ||| |||||| |||| ||||||||||||||||| |  |||||| || | ||||||| |    
T  37735416 gatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaatg 37735317  T
Q  302 gatctaataagcctaaaaa 320  Q
    |||| ||||||||||||||    
T  37735316 gatcaaataagcctaaaaa 37735298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 18458663 - 18458772
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||  | |||||| |||| | |  |||||| ||||||||||||||||| |||| | ||||||| ||  ||||| || |    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatg 18458762  T
Q  302 gatctaataa 311  Q
    |||| |||||    
T  18458763 gatcaaataa 18458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 313
Target Start/End: Original strand, 34819227 - 34819401
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||| ||||| |||||||| ||||||| ||||| ||||| |   ||| | ||| ||||||| ||| ||||   |||| ||    
T  34819227 tatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaacagcaaggact-atttggcaaacagagaaaaagtgaagg-ac 34819324  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 313  Q
      ||| |||| |||||| |||||| ||| ||||||||||| | ||||||| ||||||||| || ||||| |||||||    
T  34819325 ttaaacgtacgttttattaattgtaggatcaaaatgaaaacttgaaattatttgagggactaatggatcaaataagc 34819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 37736089 - 37736161
Alignment:
Q  204 tttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||||| ||||||||||| ||||  | |||||| |||| |||| |||||| ||||||| ||||||||||||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaa 37736161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 41264595 - 41264771
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    ||||||| |||||| ||||   || ||||||||| |||| ||||   ||||| ||||| || | |||||||| ||||||||||| ||||  | ||||| |    
T  41264595 tatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgagatttatttggcaaacggagaaaaaggtgagggatc 41264694  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||| |   ||||||| || |||| ||||||||||||||   |||||||| | |||||||||   ||||||||||||    
T  41264695 aaaacgccatttttattaaatgtgagaccaaaatgaaaacatgaaattaaataagggaccaaacaatctaataagcc 41264771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 53421765 - 53421841
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||||||||| ||||||| ||| ||||  | ||||||||||| |||| |||||| |||||| |||| ||||||||||    
T  53421765 gggatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaa 53421841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 298
Target Start/End: Original strand, 10340036 - 10340071
Alignment:
Q  263 gaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||||||||||||||||||||||| |||||||||||    
T  10340036 gaccaaaatgaaaaatggaaattagttgagggacca 10340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 23443463 - 23443578
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||| || |||||  | | ||||  |||||||| |||||| |||| ||||||||||||||||| |  ||||||||| ||||| ||  |    
T  23443463 gatttatttggcaaacagaagaaaagatgaaggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaagggatcattg 23443562  T
Q  302 gatctaataagcctaa 317  Q
    |||| ||||| |||||    
T  23443563 gatcaaataaacctaa 23443578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 41544773 - 41544663
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| ||||||| ||||||||  | ||||||  ||| |||| || ||| |||| | ||||||||||||||| | ||||||| || | |||||||     
T  41544773 ggatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggaccaat 41544674  T
Q  301 ggatctaataa 311  Q
    | |||||||||    
T  41544673 gaatctaataa 41544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 28909475 - 28909516
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  28909475 tagacatgcatgatctaaccgtcctcttttaataaaaaagat 28909516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 40364430 - 40364345
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    ||||||||| ||||||||||| ||||  | ||||||  ||| |||| |||||| |||| | ||||||||||||||| | |||||||    
T  40364430 ggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaattttaggaccaaaatgaaaacttgaaatta 40364345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 315
Target Start/End: Complemental strand, 53187688 - 53187556
Alignment:
Q  182 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 281  Q
    |||||||| ||||| || |||||||||| |||||||||| |||||  | ||||||||||   ||| |||||| ||||||  || ||||||||||| | ||    
T  53187688 gggttaaacttaacggtagggatttatttggcaaacggaagaaaaagtgagggaccaaaca-tacattttattaattgtaagatcaaaatgaaaacttga 53187590  T
Q  282 aattaattgagggaccaacggatctaataagcct 315  Q
    ||||| ||  |||||||   |||| |||||||||    
T  53187589 aattatttaggggaccattcgatcaaataagcct 53187556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 3209983 - 3210051
Alignment:
Q  248 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||||| |||||||||||||||||||||| |  |||||| || ||||||||  | ||| ||||||||||    
T  3209983 ttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggaccattgaatcaaataagccta 3210051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 138 - 313
Target Start/End: Original strand, 125174 - 125350
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||||||||| |||||||| |||| |||| ||||||| ||||| ||||||||  ||||||||| ||||||||||||||||  | ||||||    
T  125174 tatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgttaggatttatttggcaaacggaggaaaaagtgagggac 125273  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 313  Q
    |||||||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||  ||||| |||||||    
T  125274 caaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagc 125350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 138 - 321
Target Start/End: Complemental strand, 124141 - 123960
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||| ||||| ||||||||||||||| ||  || |||||||| ||||||||  ||||||||| ||||||| ||||||||  | |||||||    
T  124141 tatggtggaccactcttaaggttggtccaccatagatat--ttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggacc 124044  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 321  Q
    |||| |||| |||||| |||||||||||||||||||||| | ||||||| |||| ||||||  ||||| |||||||| ||||||    
T  124043 aaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgaaggaccattggatcaaataagccaaaaaaa 123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 138 - 318
Target Start/End: Original strand, 54126 - 54307
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| ||| | ||||| |||  |||||||| ||||||||||||||||| | ||||||    
T  54126 tatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaacagtcacgatttatttggcaaacggaggaaaatttgagggac 54225  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
    ||||| | || |||||| ||||||| ||||||||| |||| | ||||||| |||||||||||| ||||| ||||||||||||    
T  54226 caaaacgcacgttttattaattgtgcgaccaaaattaaaacttgaaattatttgagggaccaatggatcaaataagcctaaa 54307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 289
Target Start/End: Complemental strand, 52757 - 52615
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||| ||||||| ||||||||||||| ||||  ||   |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||| ||    
T  52757 gaccatttttaaggttggtccaccatatacat--ttaaagttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaacgt 52660  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    || |||||| |||||||||| ||||||||||| | ||||||||||    
T  52659 acattttattaattgtgggatcaaaatgaaaacttgaaattaatt 52615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 143 - 315
Target Start/End: Original strand, 325134 - 325304
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||| ||||| ||||||||||||||||||  || | |||||||||||| ||||||||||||| ||||||||||||||||  | ||||||||||||    
T  325134 tggaccactattaaggttggtccaccatagacat--ttagagttaaagttaacagtcgggatttatttggcaaacggaggaaaacttgagggaccaaaag 325231  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||   |||| |||||||||    
T  325232 gtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattagatcaaataagcct 325304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 138 - 298
Target Start/End: Original strand, 27705258 - 27705418
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||| | ||||||| |||||| |||||||||||| |||||||    
T  27705258 tatggtggaccacttttaaggttggtccaccatagacatcatttggattaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgagggacc 27705357  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||| |||| |||||| ||||||  |||||||||||||| | ||||||| |||||| ||||    
T  27705358 aaaacgtacgttttattaattgtatgaccaaaatgaaaacttgaaattatttgaggaacca 27705418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 137 - 315
Target Start/End: Complemental strand, 22047908 - 22047729
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |||| | |||||| ||||| | | ||||||||| ||||||||||||||||  | |||||    
T  22047908 ttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgaggga 22047809  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||||| |||| |||||| |||||||||||||||||||||| | |||||||||| ||||||||  ||||| |||||||||    
T  22047808 ccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggaccattggatcaaataagcct 22047729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 138 - 312
Target Start/End: Complemental strand, 39604028 - 39603853
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||| ||||| ||||| |||  |||||||| ||||||||||||||||| | ||||||    
T  39604028 tatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtcatgatttatttggcaaacggaggaaaatttgagggac 39603929  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataag 312  Q
    ||||| |||| |||||| |||||||||| ||||||||||| | ||||||| |||||||| ||| ||||| ||||||    
T  39603928 caaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggatcaatggatcaaataag 39603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 30859113 - 30859291
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||||| |||  || ||||| ||||||| ||||||||| | ||||||    
T  30859113 tatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaagacttatttggcaaacagaggaaaatgtgagggac 30859212  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
      ||| |||| |||||| |||||||||||||||||||||| | ||||||| ||||||||| || | ||| |||||||||    
T  30859213 ttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggactaatgaatcaaataagcct 30859291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 138 - 318
Target Start/End: Complemental strand, 30910916 - 30910735
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||||||||||| |||||| |||||| |||||||||||| |||| |||||||| || |||| ||||||||| | ||||||    
T  30910916 tatggtggaccactcttaaggttggtccaccaaagacatcatttggtgttaaagttaacagtcgagatttatttggtaaacagaggaaaatgtgagggac 30910817  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||||||    
T  30910816 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctaaa 30910735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 34894261 - 34894144
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||||| || |||||||||||  ||| |||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||| |||||||||    
T  34894261 gggatttttttggcaaacggagacaaaactaagggaccaaaaggtactttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaa 34894162  T
Q  300 cggatctaataagcctaa 317  Q
     |||||||||||||||||    
T  34894161 tggatctaataagcctaa 34894144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 39605426 - 39605562
Alignment:
Q  151 ttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttt 250  Q
    ||||||||||||||||||||| ||||  ||   ||| |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||| |||  |||    
T  39605426 ttttaagattggtccaccatatacat--ttaaagttgaagttaaccgtcaggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttt 39605523  T
Q  251 tatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    ||| |||||||||||||||||||||| | ||||||||||    
T  39605524 tattaattgtgggaccaaaatgaaaacttgaaattaatt 39605562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 34898966 - 34899072
Alignment:
Q  211 ggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaata 310  Q
    |||||||||||  ||| |||||||||||||| ||||||||||| | || |||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  34898966 ggcaaacggagacaaaactaagggaccaaaatgtactttttattacttatgggaccaaaatgaaaaatgaaaattaattaagggaccaatggatctaata 34899065  T
Q  311 agcctaa 317  Q
    |||||||    
T  34899066 agcctaa 34899072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 138 - 299
Target Start/End: Complemental strand, 8521427 - 8521268
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||| | ||||| ||||||||||||| ||||  || |||||||||||||||||||||||||||| | |  ||||||  |||  | |||||||    
T  8521427 tatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggacc 8521330  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||  |   |||||| | || ||||||||||||||||| | |||||||||| |||||||||    
T  8521329 aaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaagggaccaa 8521268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 24503296 - 24503191
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||||| || ||||||| |||  ||| ||||||||||||||||||| |||||| | || ||||||||||||||||| ||| |||||||| |||||||||    
T  24503296 gggatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggaccaa 24503197  T
Q  300 cggatc 305  Q
     |||||    
T  24503196 tggatc 24503191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 289
Target Start/End: Complemental strand, 30857965 - 30857823
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| |||||||| |||||||||  ||   |||||||||||| ||   |||||||| | |||| |||||||||||| | |||||||||  |    
T  30857965 gaccacttttaaggttggtccatcatagacat--ttaaagttaaagttaactgttaagatttatttgacaaaaggaggaaaatctgaaggaccaaaacat 30857868  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    || |||||| |||||||||||||||||||||| |  |||||||||    
T  30857867 acgttttattaattgtgggaccaaaatgaaaacttaaaattaatt 30857823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 314
Target Start/End: Original strand, 30912114 - 30912280
Alignment:
Q  146 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 245  Q
    |||||||||||| ||||||||||||||| ||  || | ||||||||||||  | |||||||||| ||||||||||| ||||  | |||||| |||| |      
T  30912114 accacttttaaggttggtccaccatagatat--ttggagttaaagttaacacttgggatttatttggcaaacggagaaaaaggtgagggactaaaacgcc 30912211  T
Q  246 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
      |||||| ||||||||||||||||||||||   |||||||| | |||||| ||  |||||||||||||    
T  30912212 acttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggactaaacgatctaataagcc 30912280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 316
Target Start/End: Original strand, 33173903 - 33174080
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||| ||||||| ||||| ||||||||||||||||||  || |||||||| ||||| | |  ||||||||| ||||||| ||||||||  | ||||||    
T  33173903 tatggtagaccactcttaaggttggtccaccatagacat--ttggggttaaacttaacagccaaggatttatttggcaaacagaggaaaaggtgagggac 33174000  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
     |||| |   ||||||| || ||||||| |||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  33174001 taaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccta 33174080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 316
Target Start/End: Original strand, 1010308 - 1010484
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    ||||| |||||||| ||||| ||||||||||||| ||||  || |||||||||||||||||||||||||||| | |  ||||||  |||  | |||||||    
T  1010308 tatggcggaccactcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggacc 1010405  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    ||||  |   |||||| | || |||||||||||| |||| | |||||||||| |||||||||  || ||| ||||||||    
T  1010406 aaaacatgagttttattagttatgggaccaaaataaaaacttgaaattaattaagggaccaaatgacctattaagccta 1010484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 318
Target Start/End: Original strand, 22308742 - 22308921
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| | ||||||||||||||||  || |||||||| |||||   |  ||||||||| ||||||||||| ||||| | ||||||    
T  22308742 tatggtggaccactcttaaggtaggtccaccatagacat--ttggggttaaacttaacaaccatggatttatttggcaaacggagcaaaatgtgagggac 22308839  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
     |||| |    |||||| |||| |||||||||||||||||   ||||||| ||  ||||||||  |||||||||||||||||    
T  22308840 taaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattatttaggggaccaaacgatctaataagcctaaa 22308921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 24509040 - 24509138
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    ||||||| || ||||||| |||  ||| ||||||||||||||||||| |||||| | || ||||||||||||||||| ||| |||||||| ||||||||    
T  24509040 gggatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggacca 24509138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 22049122 - 22049259
Alignment:
Q  182 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 281  Q
    |||||||| ||||| |  |||||||||| | ||||| ||||||||  | ||||||||||| |||| |||||| |||| ||||||||||||||||| | ||    
T  22049122 gggttaaacttaacagcagggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttga 22049221  T
Q  282 aattaattgagggaccaacggatctaataagcctaaaa 319  Q
    ||||| ||  ||||| || || || |||||||| ||||    
T  22049222 aattatttaggggactaatggttcaaataagccaaaaa 22049259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 15548413 - 15548323
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaa 226  Q
    |||||||||| || | ||||| ||||||||||| |||||| |||| |||||||| ||||| | | ||||||||| ||||||||||||||||    
T  15548413 ttatggtggatcattcttaaggttggtccaccagagacatcatttagggttaaacttaacaggcaggatttatttggcaaacggaggaaaa 15548323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 41798006 - 41798064
Alignment:
Q  255 aattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 313  Q
    ||||||||||||||||| |||| | ||||||| |||||||||||| ||||| |||||||    
T  41798006 aattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataagc 41798064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 32757877 - 32757838
Alignment:
Q  260 tgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  32757877 tgggaccaaaatgaaaactggaaattatttgagggaccaa 32757838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 1102791 - 1102736
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 195  Q
    |||||||||||||| ||||| |||||| |||||||||||  || ||||||||||||||    
T  1102791 tatggtggaccactcttaaggttggtctaccatagacat--ttggggttaaagttaac 1102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 4127196 - 4127251
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 195  Q
    |||||||||||||||||||||||| || | |||||||||  || ||||||||||||||    
T  4127196 tatggtggaccacttttaagattgatctatcatagacat--ttggggttaaagttaac 4127251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 10978345 - 10978399
Alignment:
Q  262 ggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    ||||||||||||||| ||||||||||||  ||||||||  |||||| ||||||||    
T  10978345 ggaccaaaatgaaaattggaaattaattaggggaccaaatgatctattaagccta 10978399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 20538120 - 20538066
Alignment:
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||||||| |||| ||||||||||||||||| | ||||||||||  ||||||||    
T  20538120 actttttattaattatgggaccaaaatgaaaatttgaaattaattaggggaccaa 20538066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 138 - 320
Target Start/End: Original strand, 32798474 - 32798656
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||| |||||| ||||||||  ||||||||| | ||||||||| ||||  | ||||||     
T  32798474 tatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtgaggatttatttgacaaacggagaaaaaattgagggact 32798573  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 320  Q
    ||||||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||  | ||| ||||||||||||||    
T  32798574 aaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgcatcaaataagcctaaaaa 32798656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 137 - 315
Target Start/End: Original strand, 44076303 - 44076482
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||||||||| || ||||||  ||| |||||||||||||| ||||||| ||||| ||||| || |||||||||| ||||||||||||||||  | ||| |    
T  44076303 ttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgtagggatttatttggcaaacggaggaaaaattgaggca 44076402  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    ||||||| ||| |||||| ||||||||||||||||| |||| | ||||||| |||||||||||  ||||| |||||||||    
T  44076403 ccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaattatttgagggaccattggatcaaataagcct 44076482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 137 - 314
Target Start/End: Original strand, 45281130 - 45281306
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||| ||||||| ||||| |||||||||| ||||||| |||||| ||||||||||| || |||||||||| |||||| |||||||||||| | |||     
T  45281130 ttatggtagaccactcttaaggttggtccaccgtagacatcatttggattaaagttaactgttgggatttatttggcaaatggaggaaaatctgaaggat 45281229  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||||  || ||||||| |||||| ||||||||||||||| | ||||||| ||||||||| |  ||||| ||||||||    
T  45281230 caaaacata-tttttattaattgttggaccaaaatgaaaacttgaaattatttgagggactattggatcaaataagcc 45281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 141 - 286
Target Start/End: Complemental strand, 42870985 - 42870839
Alignment:
Q  141 ggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaa 239  Q
    ||||||||||| ||||||||||||||| ||||||||  |||||| ||||| ||||| ||| ||||| ||||||||||| || |||||  |||||||| ||    
T  42870985 ggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtcaggattcattcggcaaacagacgaaaaagtaagggactaa 42870886  T
Q  240 aaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    || |||| |||||| |||||||||||||||||||||| | |||||||    
T  42870885 aacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 42870839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 298
Target Start/End: Complemental strand, 4810619 - 4810483
Alignment:
Q  163 tccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtg 261  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| ||||| | | |||||||||  ||| |||||| |||| ||    
T  4810619 tccaccatagacatcatttggggttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatg 4810520  T
Q  262 ggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||||||||| |||| | |||| || |||||||||||    
T  4810519 ggaccaaaataaaaatttgaaagtatttgagggacca 4810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 138 - 316
Target Start/End: Original strand, 32695216 - 32695395
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||| | ||||||||||| |||||||||||| ||||||| ||||| ||||| ||| ||| | ||| ||||||| ||||||||  | | ||||    
T  32695216 tatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacggtcaggactaatttggcaaacagaggaaaacgtgaaggac 32695315  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
      ||| |||| |||||| ||||||| |||||||||||||| | ||||||| |||||||||||| | ||| ||||||||||    
T  32695316 ttaaacgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccaatgaatcaaataagccta 32695395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 317
Target Start/End: Original strand, 42100055 - 42100227
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||||||||| ||||||||||| ||||||  ||   |||||||||||| ||||||| ||||| ||||||||||||||||| | ||||| |||||     
T  42100055 tggaccacttttaaggttggtccaccaaagacat--ttgaagttaaagttaacagtcgggaattatttggcaaacggaggaaaatatgagggatcaaaac 42100152  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 317  Q
    |   ||||||| ||||||| ||||||||||||||   |||||||| | ||||| |||  ||||||||||||||||    
T  42100153 gccatttttattaattgtgagaccaaaatgaaaacatgaaattaaataagggatcaaacgatctaataagcctaa 42100227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 13117575 - 13117752
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||| ||||||||||||||  ||||||||| ||| | || |||||||||||| || |  ||||||||||||| ||||||| ||||||||| | ||||||     
T  13117575 tatgatggaccacttttaaagttggtccactatatagatcatttgggttaaacttgatggtcgggatttatttggcaaacagaggaaaatgtgagggact 13117674  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||| |   ||||||| |||| |||||||||||||||||   |||||||| | |||||||||  ||||||||||||||    
T  13117675 aaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 13117752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 138 - 317
Target Start/End: Complemental strand, 42098737 - 42098558
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||||||||| ||||||||||| |||||| |||| |||||||| ||||| ||| ||||||||| |||||||||||  |||  |  ||||     
T  42098737 tatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaacagtc-ggatttatttggcaaacggagacaaacgtgggggat 42098639  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 317  Q
    ||||| |    |||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||||    
T  42098638 caaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctaa 42098558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 143 - 316
Target Start/End: Complemental strand, 13116497 - 13116326
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||| | |||||||||| |  ||||||||  || | |||||||||||| ||||||||||||| ||||||||||||||||| | | |||| ||||     
T  13116497 tggaccactctgaagattggtctattatagacat--ttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaaggactaaaac 13116400  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |    |||||| ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  13116399 gccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccta 13116326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 147 - 289
Target Start/End: Complemental strand, 32693993 - 32693853
Alignment:
Q  147 ccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtac 246  Q
    ||||||||||| |||||||| |||| ||||  ||   |||||||||||| || |||||||||| ||||||||||||||||||| | ||||||||  |||     
T  32693993 ccacttttaaggttggtccatcatatacat--ttaaagttaaagttaactgttgggatttatttggcaaacggaggaaaatctgaaggaccaaagcgtat 32693896  T
Q  247 tttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
     |||||| |||||||||||||||||||||| |  |||||||||    
T  32693895 gttttattaattgtgggaccaaaatgaaaacttaaaattaatt 32693853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 28418916 - 28418800
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  28418916 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 28418817  T
Q  302 gatctaataagcctaaa 318  Q
    |||||| ||||||||||    
T  28418816 gatctattaagcctaaa 28418800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 137 - 297
Target Start/End: Complemental strand, 22551180 - 22551022
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||||||||| |||||||||| || |||||||||||| ||  || |||||||| |||||  ||  ||||||||| |||||| |||| ||||  | |||||    
T  22551180 ttatggtggatcacttttaaggtttgtccaccatagagat--ttggggttaaacttaacaatccaggatttatttggcaaatggagaaaaag-tgaggga 22551084  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacc 297  Q
    ||||||| ||| |||||| ||||||||||||||||| |||| | ||||||| ||||||||||    
T  22551083 ccaaaagatacgttttattaattgtgggaccaaaataaaaacttgaaattatttgagggacc 22551022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 26696643 - 26696525
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| |||||| |||||||||  | ||||||||||| |||  |||||| |||||||||||||||||||||| | ||||||||||  |||||||      
T  26696643 ggatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggaccatt 26696544  T
Q  301 ggatctaataagcctaaaa 319  Q
    | ||| |||||||||||||    
T  26696543 gaatcaaataagcctaaaa 26696525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 286
Target Start/End: Complemental strand, 45279845 - 45279706
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    |||||||||||||| |||||||||||| ||||  || | |||||||||||||||||||||||||| | |||||| |  ||||  | ||||||||||| ||    
T  45279845 gaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcgggatttatttgccaaacgaaaaaaaacttgagggaccaaaacgt 45279748  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    || |||||| ||||||  ||| |||||||||| | |||||||    
T  45279747 acgttttattaattgtatgactaaaatgaaaatttgaaatta 45279706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 17339537 - 17339668
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||||  | |||||| |||| |   ||||||| |||||| |||||||||||||||   ||||    
T  17339537 gttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaatatgaaa 17339636  T
Q  284 ttaattgagggaccaacggatctaataagcct 315  Q
    |||| | |||||||||  ||||||||||||||    
T  17339637 ttaaataagggaccaaacgatctaataagcct 17339668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 316
Target Start/End: Original strand, 42872133 - 42872309
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||| ||||||| ||||| |||||| |||||||||||  ||  ||||||||||||||||| ||||||||| | ||||||||||||||  | | ||||     
T  42872133 tatggtagaccactcttaaggttggtctaccatagacat--ttgaggttaaagttaaccgtcaggatttatttgacaaacggaggaaaaagtgaaggact 42872230  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||| |||| ||||||  ||| || ||  |||||||||| |  |||||| || ||||||||  ||||| ||||||||||    
T  42872231 aaaacgtacgttttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattggatcaaataagccta 42872309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 311
Target Start/End: Complemental strand, 41629872 - 41629709
Alignment:
Q  146 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 245  Q
    |||||||||||| ||||| |||||||||| |  || | ||| |||||||| ||||||||||||| |||||||||| |||||  | ||||| |||||  ||    
T  41629872 accacttttaaggttggttcaccatagactt--ttggagttcaagttaacggtcgggatttatttggcaaacggaagaaaacttgagggatcaaaatata 41629775  T
Q  246 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataa 311  Q
    | |||||| ||||||| ||||||||| |||| | ||||||| ||  ||||| || ||||| |||||    
T  41629774 cgttttattaattgtgagaccaaaataaaaacttgaaattatttaggggactaatggatcaaataa 41629709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 28420180 - 28420293
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| | ||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  28420180 gatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 28420279  T
Q  302 gatctaataagcct 315  Q
    |||||| |||||||    
T  28420280 gatctattaagcct 28420293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 32797245 - 32797136
Alignment:
Q  205 ttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggat 304  Q
    ||||| || ||||||||||||| || ||||||  ||| |||| |||||| |||||||||||||||||||||| | ||||||| || |||||||||  |||    
T  32797245 ttatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggaccaatagat 32797146  T
Q  305 ctaataagcc 314  Q
    | ||||||||    
T  32797145 caaataagcc 32797136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 8571559 - 8571697
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||||||||||| ||||||  ||||||||||||||||||  || |||||||| ||||| | |  |||||||||| || |||||||| ||||  | | |||    
T  8571559 tatggtggaccatttttaaagttggtccaccatagacat--ttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaagga 8571656  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||||| |||| |||||| ||||||  ||||||||||||||    
T  8571657 ccaaaacgtacgttttattaattgtatgaccaaaatgaaaa 8571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 315
Target Start/End: Complemental strand, 17338151 - 17338038
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||| ||||| | |||||| |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||      
T  17338151 gatttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 17338052  T
Q  302 gatctaataagcct 315  Q
    ||| ||||||||||    
T  17338051 gatttaataagcct 17338038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 42877791 - 42877722
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttatt 209  Q
    |||||||||||| | ||||| ||||||||||||| ||||  || ||||||||||||||||||||||||||||    
T  42877791 tatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatt 42877722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 8570230 - 8570116
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| ||||||| |||  |||  | ||||||||||| |||| |||||| |||||| |||||||||||||||   ||||||||||  |||||||     
T  8570230 gggatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggaccat 8570131  T
Q  300 cggatctaataagcc 314  Q
     ||||| ||||||||    
T  8570130 tggatcaaataagcc 8570116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 315
Target Start/End: Complemental strand, 30786851 - 30786673
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggtt--aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggg 234  Q
    ||||| ||||||||||||||  ||| ||||||||||||||  || | |||  ||||||||| ||||| ||||||| ||||||||||| ||||  | ||||    
T  30786851 ttatgatggaccacttttaaagttgatccaccatagacat--ttagagttaaaaagttaacagtcggaatttatttggcaaacggagaaaaaagtgaggg 30786754  T
Q  235 accaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    | |||||  ||| |||||| |||| || || ||||||||||| |  |||||| |||| ||||||  | ||| |||||||||    
T  30786753 atcaaaatatacgttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggaccattgaatcaaataagcct 30786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 211707 - 211594
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  211707 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 211608  T
Q  300 cggatctaataagc 313  Q
      ||||||||||||    
T  211607 atgatctaataagc 211594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 240549 - 240662
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  240549 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 240648  T
Q  300 cggatctaataagc 313  Q
      ||||||||||||    
T  240649 atgatctaataagc 240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 725330 - 725217
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  725330 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 725231  T
Q  300 cggatctaataagc 313  Q
      ||||||||||||    
T  725230 atgatctaataagc 725217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 793904 - 794017
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  793904 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 794003  T
Q  300 cggatctaataagc 313  Q
      ||||||||||||    
T  794004 atgatctaataagc 794017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 38697070 - 38697126
Alignment:
Q  260 tgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    ||||||||||||||||| ||||||||||||||||||||||  || ||| ||||||||    
T  38697070 tgggaccaaaatgaaaactggaaattaattgagggaccaaatgagctattaagccta 38697126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 26697797 - 26697925
Alignment:
Q  159 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 258  Q
    ||||||||||||| ||||  || |||||||| |||||  |  ||||||||||| |||| ||| |||||  | |||||| |||| |||| |||||| ||||    
T  26697797 ttggtccaccataaacat--ttggggttaaacttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaatt 26697894  T
Q  259 gtgggaccaaaatgaaaaatggaaattaatt 289  Q
     |||||| ||||||||||||| ||| |||||    
T  26697895 atgggactaaaatgaaaaatgaaaaataatt 26697925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 276
Target Start/End: Complemental strand, 6397893 - 6397819
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||||||| ||||||||||| ||||  | |||||| |||| |||  |||||| ||||||||||||||||||||||    
T  6397893 gatttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaa 6397819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 24192606 - 24192661
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 195  Q
    |||||||||||||| ||||| ||||||||||||||||||  || ||||||||||||||    
T  24192606 tatggtggaccactcttaaggttggtccaccatagacat--ttagggttaaagttaac 24192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 34504542 - 34504583
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  34504542 tagacatgcatgatctaacgatcctcttttaataaaaaagat 34504583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 45281056 - 45281097
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  45281056 tagacatgcatgatctaacgttcatcttttaataaaaaagat 45281097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 17702310 - 17702378
Alignment:
Q  231 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||||  ||  |||||| | || ||||||||||||||||| |||||||||||| |||||||||    
T  17702310 agggaccaaaacataggttttattagttatgggaccaaaatgaaaattggaaattaattaagggaccaa 17702378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 30787588 - 30787680
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    ||||||||||||   | ||||||||| |||||||||| |||||  | |||||||||||  ||  |||||| |||| |||||||||||||||||    
T  30787588 gttaaagttaacatacaggatttatttggcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaa 30787680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 38696481 - 38696443
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacat 176  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  38696481 tatggtggaccacttttaaggttggtctaccatagacat 38696443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 26696750 - 26696709
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||    
T  26696750 tagacatgcataatctaacgatcctcttttaataaaaaagat 26696709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 31845738 - 31845795
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgt 198  Q
    |||||||||||||| ||||| ||||| ||||||||||||  || |||||||||||||||||    
T  31845738 tatggtggaccactcttaag-ttggttcaccatagacat--ttggggttaaagttaaccgt 31845795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 138 - 332
Target Start/End: Original strand, 41873914 - 41874107
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||||||||||||||||||  ||  ||||||| |||||   |  ||||||||| || ||||||||||||| |||| || |    
T  41873914 tatggtggaccactcttaaggttggtccaccatagacat--ttgtggttaaacttaacaaccaaggatttatttggtaaacggaggaaaagctaaagggc 41874011  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaatactagaataa 332  Q
    |||||| |||||||||| |||| || |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||    
T  41874012 caaaagatactttttattaattatgagaccaagatgaaaaatggaaattaattgagggaccaatggatctaataagcctaaaataaattagaataa 41874107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 45584950 - 45585128
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggtt-aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||| |||| ||||  |||| ||||||||||||| ||||||||| ||| ||||| ||| ||||||||| ||||||||||||||||  | | ||||    
T  45584950 tatggtggagcactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggac 45585049  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||||||||| |||||| ||||||| |||||||||||||| | ||||||| ||||||||| |  ||||| |||||||||    
T  45585050 caaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggactattggatcaaataagcct 45585128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 317
Target Start/End: Original strand, 49802846 - 49803016
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||||| ||||||||||||  || | ||| |||||||||||||||||||||| ||||||||||| ||||  | |||||| |||| ||    
T  49802846 gaccacttttaaggttggtacaccatagacat--ttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaacgt 49802943  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 317  Q
      ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||| ||||||||    
T  49802944 catttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaacaagcctaa 49803016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 318
Target Start/End: Complemental strand, 15232926 - 15232746
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||| ||||||||||||||  ||||||||| ||| |||| |||||||||||| ||||| |||  |||||||| ||||||| ||||||||| | ||||||     
T  15232926 tatgatggaccacttttaaagttggtccactatatacatcatttgggttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgagggact 15232827  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
    |||| |   ||||||| |||| |||||||||||||||||   |||||||| | |||||||||  |||||||||||||||||    
T  15232826 aaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaatgatctaataagcctaaa 15232746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 141 - 289
Target Start/End: Original strand, 15072736 - 15072883
Alignment:
Q  141 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggaccaa 239  Q
    ||||||||||| || || ||||||||||||||||||  ||  ||||||||||||| | |  ||||||||| ||||||||||||||||  |||||||||||    
T  15072736 ggtggaccactctttaggttggtccaccatagacat--ttgaggttaaagttaacagacatggatttatttggcaaacggaggaaaaaataagggaccaa 15072833  T
Q  240 aaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    || |||| |||||| |||||||||||||||||||||| | ||||||||||    
T  15072834 aatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaatt 15072883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 143 - 295
Target Start/End: Complemental strand, 27814460 - 27814309
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggtt-aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 241  Q
    ||||||||||||||  ||||||||||||||||||  || | ||| ||||||||||||||||||||||| ||||||| ||||||||  | |||||||||||    
T  27814460 tggaccacttttaaagttggtccaccatagacat--ttagagttaaaagttaaccgtcgggatttatttggcaaacagaggaaaaaatgagggaccaaaa 27814363  T
Q  242 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgaggga 295  Q
    ||||| |||||| |||| | |||| |||||||||| | ||||||| ||||||||    
T  27814362 ggtacgttttattaattataggactaaaatgaaaacttgaaattatttgaggga 27814309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 46111479 - 46111616
Alignment:
Q  187 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    ||||||||| ||||||||||||| |||||||| |||||||  | ||| |||||||||||| |||||| ||||||||||||||||| |||| | |||||||    
T  46111479 aaagttaacagtcgggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaatta 46111578  T
Q  287 attgagggaccaacggatctaataagcctaaaaaatac 324  Q
     || ||||||||  | ||| ||||||||||||| ||||    
T  46111579 tttaagggaccattgaatcaaataagcctaaaatatac 46111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 138 - 297
Target Start/End: Original strand, 16965068 - 16965228
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||  ||||||||||||| |||| ||||||| ||||| |||||| |||| ||||||| |  ||||||| |||||| ||||||||    
T  16965068 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggac 16965167  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacc 297  Q
     |||| ||  ||||||| ||||||||||||||||||||||   |||||||| | |||||||    
T  16965168 taaaacgtcatttttattaattgtgggaccaaaatgaaaataagaaattaaataagggacc 16965228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 173 - 314
Target Start/End: Original strand, 52628850 - 52628991
Alignment:
Q  173 acataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatg 272  Q
    ||||| || |||||||| ||||| || | |||||||| ||||||||||||||||  | |||||||||||||||| |||||| |||||||||||||||||     
T  52628850 acatatttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatt 52628949  T
Q  273 aaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||| | ||||||| || ||||||| |  |||| ||||||||    
T  52628950 aaaacttgaaattatttaagggaccgatagatcaaataagcc 52628991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 298
Target Start/End: Original strand, 50444651 - 50444800
Alignment:
Q  148 cacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtac 246  Q
    |||| ||||| |||||||| ||||||| |  ||||| |||||||||||| ||  ||||||||| ||||| ||||||||||  | ||||||||||| ||||    
T  50444651 cactcttaaggttggtccaacatagacgt--tttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatgagggaccaaaatgtac 50444748  T
Q  247 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
     |||||| ||||||||||| |||||||||| | ||||||| |||||||||||    
T  50444749 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 50444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 15234037 - 15234164
Alignment:
Q  192 taaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattga 291  Q
    |||| ||||||||||||| ||||||||||||||||| | |||||| |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |    
T  15234037 taacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataa 15234136  T
Q  292 gggaccaacggatctaataagcctaaaa 319  Q
    ||||||||  ||||||||||||| ||||    
T  15234137 gggaccaaacgatctaataagccaaaaa 15234164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 315
Target Start/End: Complemental strand, 16964006 - 16963831
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||| ||||||||||||||| |||||||| |||| ||||  || | |||||||||||| ||| | ||||||| ||||||||||||||||  | ||||||     
T  16964006 tatgatggaccacttttaaggttggtccatcataaacat--ttagagttaaagttaacagtcagcatttatttggcaaacggaggaaaagatgagggact 16963909  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    ||||     ||||||| ||||||||||||||||||||||   |||||||||| |  ||||||  ||||||||||||||    
T  16963908 aaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaattaattaaaagaccaaacgatctaataagcct 16963831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 286
Target Start/End: Original strand, 35943390 - 35943537
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||| |||| ||||| ||||||||||||||||||  || |||||||| ||||| | |  |||||||||| |||||||| |||||||  | ||| |    
T  35943390 tatggtggatcactcttaaggttggtccaccatagacat--ttagggttaaacttaacagccaggggatttatttggcaaacgaaggaaaaagtgagg-a 35943486  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    |||||| |||| |||||| ||||||||||||||||| |||| | |||||||    
T  35943487 ccaaaatgtacgttttattaattgtgggaccaaaataaaaatttgaaatta 35943537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 320
Target Start/End: Complemental strand, 49801792 - 49801609
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||||||||||||||| |||||  ||| || |||| ||||| ||||||| ||||| ||||| ||||||| ||||||| |||  |||  | |||||    
T  49801792 ttatggtggaccacttttaaggttggtttaccgtaaacatcatttgaggttaaaattaacagtcgg-atttatttggcaaacagagacaaacgtgaggga 49801694  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 320  Q
     |||||     ||||||| ||||||||||||||||||||||    ||||||| | |||||||||  |||||||||||||||||||    
T  49801693 tcaaaacaccatttttattaattgtgggaccaaaatgaaaatataaaattaaataagggaccaaatgatctaataagcctaaaaa 49801609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 315
Target Start/End: Complemental strand, 52627617 - 52627512
Alignment:
Q  211 ggcaaacggaggaaaatctaagggaccaaaaggtac-tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaat 309  Q
    ||||||||||||||||  ||| || |||||| |||  ||||||| |||||||||||||||||||||| | ||||||| |||||||||||  ||||| |||    
T  52627617 ggcaaacggaggaaaaattaaaggtccaaaatgtatgtttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaat 52627518  T
Q  310 aagcct 315  Q
    ||||||    
T  52627517 aagcct 52627512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 315
Target Start/End: Complemental strand, 14471030 - 14470853
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||||||||| ||||| ||||||||| |||||| |  || |||||||| ||||| |    ||||||||| |||||||| |||||||  | |||||    
T  14471030 ttatggtggaccactcttaaggttggtccactatagacgt--ttggggttaaacttaacaccgaaggatttatttggcaaacgaaggaaaaagtgaggga 14470933  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |  ||  |||| |||||| |||||||||||||||||||||| | ||||||| ||  |||||||  ||||| |||||||||    
T  14470932 cttaaccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattggatcaaataagcct 14470853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 34351973 - 34352076
Alignment:
Q  213 caaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataag 312  Q
    |||||| |||||||  | |||||||||||||||| |||||| |||||||||||||||||||||| |  |||||| || |||||| |  ||||| ||||||    
T  34351973 caaacgtaggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggactattggatcaaataag 34352072  T
Q  313 ccta 316  Q
    ||||    
T  34352073 ccta 34352076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 315
Target Start/End: Complemental strand, 23091525 - 23091348
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||||||||||||||||||  ||||||||||||||||||  ||  | ||||| ||||| | |  |||||||||| ||||||||||| ||||  | || ||    
T  23091525 tatggtggaccacttttaaagttggtccaccatagacat--ttgagattaaacttaacagactagggatttatttggcaaacggagaaaaaagtgagtga 23091428  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||||| |||| |||||| ||||||   |||||||||||||   ||||||| ||  ||||||||  |||| |||||||||    
T  23091427 ccaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaatagatcaaataagcct 23091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 317
Target Start/End: Complemental strand, 15071453 - 15071337
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| || |||||||||||||  | |||||||||||  ||| |||||| |||| || |||||||||||||| | ||||||| ||  ||||||||     
T  15071453 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaat 15071354  T
Q  301 ggatctaataagcctaa 317  Q
    ||||  |||||||||||    
T  15071353 ggattaaataagcctaa 15071337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 44278354 - 44278442
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    |||| |||| ||||||||||| ||||  | ||||||||||| |||| |||||| ||| |||||||||||||||||| | ||||||||||    
T  44278354 ggatctatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaattaatt 44278442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 24499660 - 24499775
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| || |||||||||||||  | ||||||||||| ||   |||||| ||||||| |||||||||||||| | ||||||| ||  |||||||||    
T  24499660 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaac 24499759  T
Q  301 ggatctaataagccta 316  Q
      ||| ||||||||||    
T  24499760 aaatcaaataagccta 24499775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 51042394 - 51042445
Alignment:
Q  248 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  51042394 ttttattaattgtgggaccaaaatgaaaattggaaattaattaagggaccaa 51042445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 46110449 - 46110341
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||||| ||||| ||||||||||||||| ||  || | |||||||||||| |||| ||||||||  |||||||||| ||||  | || ||||||||     
T  46110449 tggaccactcttaaggttggtccaccatagatat--ttagagttaaagttaacagtcgagatttatttagcaaacggagaaaaacttgagtgaccaaaaa 46110352  T
Q  243 gtactttttat 253  Q
    |||| ||||||    
T  46110351 gtacgttttat 46110341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 318
Target Start/End: Original strand, 15746709 - 15746888
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgg-gatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||||||||||||||||||||||  ||   |||||| ||||| || |  |||||||| | |  ||||||  | |  ||||||||    
T  15746709 tatggtggaccactcttaagattggtccaccatagacat--ttgaagttaaacttaacagtggatgatttatttgactgacggagatacaattaagggac 15746806  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
    |||||  |   |||||| | || ||||||||||||||||| ||||||||||||  ||||||||  || ||| ||||||||||    
T  15746807 caaaacatgagttttattacttatgggaccaaaatgaaaattggaaattaattaggggaccaaatgacctattaagcctaaa 15746888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 44276251 - 44276145
Alignment:
Q  183 ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaa 282  Q
    ||||||| ||||| ||| ||||||| | | ||||| ||| ||||  | | ||| ||||| |||| |||||| |||| || ||||||||||||||||||||    
T  44276251 ggttaaacttaacagtcaggatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattatgagaccaaaatgaaaaatggaa 44276152  T
Q  283 attaatt 289  Q
    |||||||    
T  44276151 attaatt 44276145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 44999405 - 44999492
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccg-tcgggatttattcggcaaacggaggaaaa 226  Q
    ||||||| |||||| ||| ||||||||||||||||||||  ||  ||||||||||||| | | |||||||||| ||||||| ||||||||    
T  44999405 tatggtgaaccactcttacgattggtccaccatagacat--ttaaggttaaagttaacagctagggatttatttggcaaacagaggaaaa 44999492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 14477734 - 14477909
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg--ggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||||||||| ||| ||||||||| || |||||||||||  || | |||||| |||||  |||  ||||||||| ||||||||||| ||||  | |||||    
T  14477734 tatggtggacaactcttaagattgatctaccatagacat--ttagagttaaacttaaca-tcgaaggatttatttggcaaacggagaaaaaagtgaggga 14477830  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |  ||| |||| |||||| |||||||||| |||| |||||| |  |||||| ||  |||||||  ||||| ||||||||    
T  14477831 cttaaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaattatttatgggaccattggatcaaataagcc 14477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 289
Target Start/End: Original strand, 48096975 - 48097124
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||| ||||||| ||||| ||||||||||||| ||||  ||  ||||||| ||||| || |||||||||| | |  ||||||  ||| |||||||||     
T  48096975 tatggtagaccactcttaaggttggtccaccatatacat--ttgaggttaaacttaacagtagggatttatttgaccgacggagacaaacctaagggact 48097072  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    ||||  |   |||||| | || |||||||||||| |||| ||||||||||||    
T  48097073 aaaacatgagttttattagttatgggaccaaaataaaaattggaaattaatt 48097124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 20064228 - 20064189
Alignment:
Q  260 tgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  20064228 tgggaccaaaatgaaaacgggaaattaattgagggaccaa 20064189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 34350286 - 34350219
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggat 204  Q
    |||||||||||||| ||||| ||| |||||||||||||| |||| |||||||| |||||  |||||||    
T  34350286 tatggtggaccactcttaaggttgatccaccatagacatcatttggggttaaacttaacgatcgggat 34350219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 9226158 - 9226196
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacat 176  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  9226158 tatggtggaccacttttaaggttgatccaccatagacat 9226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 13147359 - 13147397
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacat 176  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  13147359 tatggtggaccactattaaggttggtccaccatagacat 13147397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 315
Target Start/End: Complemental strand, 41872686 - 41872573
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||  | || |||  ||| |||| |||||| ||||||  || ||||||||||| | |||||||||  ||||||||       
T  41872686 gatttatttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccatta 41872587  T
Q  302 gatctaataagcct 315  Q
    |||| |||||||||    
T  41872586 gatcaaataagcct 41872573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 44278247 - 44278288
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||    
T  44278247 tagacatgcataatctaacgatcatgttttaataaaaaagat 44278288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 16123399 - 16123323
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||||||||| |||||||||| |||||  | |||||| |||| ||   |||||| |||||||| |||||||||||||    
T  16123399 gggatttatttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgtggaaccaaaatgaaaa 16123323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 20069954 - 20069990
Alignment:
Q  263 gaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||||||||||||  |||||||||||||||||||||    
T  20069954 gaccaaaatgaaaacgggaaattaattgagggaccaa 20069990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 138 - 316
Target Start/End: Complemental strand, 29219560 - 29219381
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| || |||||||||| ||||||||||||||||  | ||||||    
T  29219560 tatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgagggac 29219461  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | | |||||||  |||||||||||||||    
T  29219460 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaataagccta 29219381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 138 - 316
Target Start/End: Complemental strand, 29332859 - 29332680
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| || |||||||||| ||||||||||||||||  | ||||||    
T  29332859 tatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgagggac 29332760  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | | |||||||  |||||||||||||||    
T  29332759 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaataagccta 29332680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 145 - 314
Target Start/End: Original strand, 17460635 - 17460802
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||||||||||||||||||||||  ||   |||||||||||| ||||||||||||| || |||||||||||||| | ||||||||||| ||    
T  17460635 gaccacttttaagattggtccaccatagacat--ttaaagttaaagttaacggtcgggatttatttgggaaacggaggaaaatttgagggaccaaaacgt 17460732  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    || |||||| |||||||||| ||||||||||| | ||||||||||   ||||||  ||||| ||||||||    
T  17460733 acgttttattaattgtgggatcaaaatgaaaacttgaaattaattagaggaccattggatcaaataagcc 17460802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 138 - 319
Target Start/End: Original strand, 18616947 - 18617129
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||  || |||||||||| ||||||||||||||||  | ||||||    
T  18616947 tatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaatagttgggatttatttggcaaacggaggaaaaggtgagggac 18617046  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | | |||||||  ||||||||||||||||||    
T  18617047 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaatgatctaataagcctaaaa 18617129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 319
Target Start/End: Original strand, 6030412 - 6030593
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||| || |||| ||||| |||||||||| ||||||| |||||||||||||||||| || | |||||||| ||||||  ||||||||| | | ||| |    
T  6030412 tatggtagatcactcttaaggttggtccaccgtagacatcatttgggttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatc 6030511  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
    |||| |||||||| || |||||||||| ||||||||||| |  |||||| ||||||||| |  ||||| |||||||||||||    
T  6030512 aaaacgtacttttaattaattgtgggatcaaaatgaaaacttcaaattatttgagggactattggatcaaataagcctaaaa 6030593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 298
Target Start/End: Original strand, 11317310 - 11317470
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||| ||||||| ||||| |||||| ||||||||||| ||||| |||||| ||||| ||  ||||||||| | ||||||||||||||  | |||||||    
T  11317310 tatggtagaccactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattgagggacc 11317409  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    ||||  ||  |||||| |||||||||||||||||||||| | ||||||| |||||||||||    
T  11317410 aaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggacca 11317470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 137 - 315
Target Start/End: Complemental strand, 43033255 - 43033079
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||||||||| ||||| |||||| |||||||||||  ||  ||||||| |||||  ||| ||||||||| ||||||||||||||||  | |||||    
T  43033255 ttatggtggaccactcttaaggttggtctaccatagacat--ttgaggttaaacttaaca-tcgaggatttatttggcaaacggaggaaaaagtgaggga 43033159  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    ||||||||||| |||||| |||||||||||||||||||||| | ||||||| || ||||| ||  ||||| |||||||||    
T  43033158 ccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggatcattggatcaaataagcct 43033079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 148 - 314
Target Start/End: Complemental strand, 17459418 - 17459251
Alignment:
Q  148 cacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtac 246  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||| ||||  ||| | ||||||| ||||||||||||||||  | ||||||  ||| ||||    
T  17459418 cacttttaagattcgtccaccatagacatcatttggggttaaacttaaaagtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtac 17459319  T
Q  247 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
     |||||| ||||||| |||||||||||||| | ||||||| || |||||| || ||||| ||||||||    
T  17459318 gttttattaattgtgtgaccaaaatgaaaacttgaaattatttaagggactaatggatcaaataagcc 17459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 299
Target Start/End: Complemental strand, 11316102 - 11315946
Alignment:
Q  141 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaa 240  Q
    ||||||||| ||||||| ||| ||||||||||||||  || |  ||||| ||||| | ||||||||||| |||||||||||||||| || ||||||  ||    
T  11316102 ggtggaccatttttaaggttgatccaccatagacat--ttggaattaaacttaacagccgggatttatttggcaaacggaggaaaacctgagggacttaa 11316005  T
Q  241 aggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    | |||| |||||| |||||||||||||||||||||| | ||||||| ||  ||||||||    
T  11316004 acgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaa 11315946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 320
Target Start/End: Original strand, 28562798 - 28562933
Alignment:
Q  185 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 284  Q
    ||||| ||||| ||| ||||||||| | ||||||||||||||  | |||||||||||||||  |||||| |||| ||||||||||||||||| | |||||    
T  28562798 ttaaacttaacagtctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaat 28562897  T
Q  285 taattgagggaccaacggatctaataagcctaaaaa 320  Q
    || |||||||||||  | ||| ||||||||||||||    
T  28562898 tatttgagggaccattgaatcaaataagcctaaaaa 28562933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 315
Target Start/End: Complemental strand, 32469319 - 32469145
Alignment:
Q  142 gtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 241  Q
    |||||||||| ||||  ||||||||||||| |||||||||| |||||| |||||  |  ||||||||| ||||| ||||||||||  | | |||||||||    
T  32469319 gtggaccactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggatttatttggcaa-cggaggaaaaagtgaaggaccaaaa 32469221  T
Q  242 ggtact--ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||||   |||||| |||||||||| ||||||||||| | ||||||| |||||||||||  | ||| |||||||||    
T  32469220 ggtacacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataagcct 32469145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 318
Target Start/End: Complemental strand, 18615643 - 18615510
Alignment:
Q  185 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 284  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| || ||||| |||| |   ||||||| ||||||| ||||||||||||||   |||||    
T  18615643 ttaaaattaacagtcgggatttatttggcaaacggaggaaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatgaaaatatgaaat 18615544  T
Q  285 taattgagggaccaacggatctaataagcctaaa 318  Q
    ||| | |||||||||  |||||||||||| ||||    
T  18615543 taaataagggaccaaacgatctaataagcataaa 18615510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 29220865 - 29220994
Alignment:
Q  185 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 284  Q
    ||||| ||||| ||||||||| ||| ||||||| ||||||||| |||||||| |||| |   ||||||| ||||||||||||||||||||||   |||||    
T  29220865 ttaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaat 29220964  T
Q  285 taattgagggaccaacggatctaataagcc 314  Q
    ||| | |||||||||  |||||||||||||    
T  29220965 taaataagggaccaaacgatctaataagcc 29220994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 29334164 - 29334293
Alignment:
Q  185 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 284  Q
    ||||| ||||| ||||||||| ||| ||||||| ||||||||| |||||||| |||| |   ||||||| ||||||||||||||||||||||   |||||    
T  29334164 ttaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaat 29334263  T
Q  285 taattgagggaccaacggatctaataagcc 314  Q
    ||| | |||||||||  |||||||||||||    
T  29334264 taaataagggaccaaacgatctaataagcc 29334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 298
Target Start/End: Original strand, 42641803 - 42641962
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||| ||||||| ||||| |||| ||||||||||||| ||||||||| || ||||  ||  ||||||||| ||||||||||  ||||  |  ||||||    
T  42641803 tatggtagaccactcttaaggttggcccaccatagacatcatttgggttgaacttaattgtgaggatttatttggcaaacgga-aaaaaagtgggggacc 42641901  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    ||||||| | |||||| |||| |||||||||||| |||| | ||||||| |||||||||||    
T  42641902 aaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaattatttgagggacca 42641962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 315
Target Start/End: Original strand, 7437718 - 7437880
Alignment:
Q  153 ttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtacttttta 252  Q
    |||| ||| ||||| |||||| || |||||||||||| ||||  ||  |||||||||  | |||||||||||||  | |||||||||||  ||| |||||    
T  7437718 ttaaaattagtccatcatagatattatttgggttaaacttaattgttaggatttattttgtaaacggaggaaaaattgagggaccaaaatatacgtttta 7437817  T
Q  253 tcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    | |||||||||||||||||||||| | ||||||| |||||  ||||  ||||| |||||||||    
T  7437818 ttaattgtgggaccaaaatgaaaacttgaaattatttgagcaaccattggatcaaataagcct 7437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 32470524 - 32470700
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||| ||||||| ||  ||||||||||||||  || | |||||| ||||| | ||||||||||| | ||||||||||||||  | ||| ||  |||     
T  32470524 tggaccatttttaaggtttatccaccatagacat--ttggagttaaacttaacagccgggatttatttgacaaacggaggaaaacatgaggaacttaaac 32470621  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 321  Q
    |||| |||||| ||||||||||||||||| |||| | ||||||| ||  ||||| || ||||| |||||||| ||||||    
T  32470622 gtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatggatcaaataagccaaaaaaa 32470700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 320
Target Start/End: Complemental strand, 1083153 - 1082980
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||| ||||||||||| ||  || | ||||||||||||  | |||||||| | ||||||||||| ||||  | | |||||||||       
T  1083153 gaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacac 1083056  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 320  Q
      ||||||| || |||||||||||||||||||   |||||||| | |||||||||  ||| |||||||||||||||    
T  1083055 catttttattaaatgtgggaccaaaatgaaaatatgaaattaaataagggaccaaacgatataataagcctaaaaa 1082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 43034477 - 43034573
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||||||| | ||||||||||||||  | |||||||||||||||| |||||| ||||||| ||  |||||||||| | ||||||| |||||||||||    
T  43034477 gatttatttgacaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagattaaaatgaaaacttgaaattatttgagggacca 43034573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 6030717 - 6030601
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| ||||||||||||||||  ||||| || |||| |    |||||| ||||||||||| ||||||||||   |||||||| | |||||||||    
T  6030717 gggatttatttggcaaacggaggaaaaaataaggaactaaaacgccaattttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaa 6030618  T
Q  300 cggatctaataagccta 316  Q
      |||||||||||||||    
T  6030617 acgatctaataagccta 6030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 34469068 - 34468957
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||| || |||||| | |||||| |||| ||  ||||||| ||||||| ||||||||||||||   |||||||| | |||||||||      
T  34469068 gatttatttggcaaacagaagaaaatgtgagggactaaaacgtcatttttattaattgtgcgaccaaaatgaaaacatgaaattaaataagggaccaaac 34468969  T
Q  302 gatctaataagc 313  Q
    ||||||||||||    
T  34468968 gatctaataagc 34468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 6028884 - 6028787
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgg-gatttattcggcaaacggaggaaaatctaagggaccaaaa 241  Q
    |||||||||||||||| |||||||||||| ||||  || | ||||||||||||||||||  ||||||| |||||||| || ||||  | |||||||||||    
T  6028884 tggaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcggaaatttatttggcaaacgaagaaaaacttgagggaccaaaa 6028787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 28561477 - 28561382
Alignment:
Q  203 atttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    ||||||| | |||||| |||||||  | |||||||||||| ||| |||||| ||||||| |||||||||||||| |  |||||| || ||||||||    
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggacca 28561382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 7436546 - 7436460
Alignment:
Q  233 ggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
    |||||||||||||  |||||| |||||| |||||||||| |||| | ||||||| |||||||||||  ||||| |||| ||| ||||    
T  7436546 ggaccaaaaggtatattttattaattgtaggaccaaaataaaaacttgaaattatttgagggaccattggatcaaatacgccaaaaa 7436460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 1085330 - 1085504
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    ||||||| |||||| ||||   || ||||||||| |||| ||||   ||||| ||||| || | |||||||| ||||||||||||||||  | |||||||    
T  1085330 tatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgtgatttatttggcaaacggaggaaaa--tgagggacc 1085427  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||| |    |||||| || ||||| |||||||||||||   |||||||| | |||||||||   ||||||||||||    
T  1085428 aaaacgccaattttattaaatgtggtaccaaaatgaaaacatgaaattaaataagggaccaaacaatctaataagcc 1085504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 11547834 - 11547745
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaa 226  Q
    ||||||||||||||  |||| ||||||||  |||||||| |||| |||||||| ||||| ||| ||||||||| | |||||| |||||||    
T  11547834 tatggtggaccactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtcaggatttatttgacaaacgaaggaaaa 11547745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 2277504 - 2277572
Alignment:
Q  231 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||||  ||  |||||| | || ||||||||||||||||| ||||||||| ||||||||||||    
T  2277504 agggaccaaaacataagttttattacttatgggaccaaaatgaaaactggaaattatttgagggaccaa 2277572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 319
Target Start/End: Original strand, 44192453 - 44192569
Alignment:
Q  203 atttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacgg 302  Q
    ||||||| | ||||||||||||||| | |||||| |||| |   ||||||| |||| ||||| |||||||||||   |||||||| | |||||||||       
T  44192453 atttatttgacaaacggaggaaaatgtgagggactaaaatgccatttttattaattttgggatcaaaatgaaaacatgaaattaaataagggaccaaaca 44192552  T
Q  303 atctaataagcctaaaa 319  Q
    |||||||||||| ||||    
T  44192553 atctaataagccgaaaa 44192569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 299
Target Start/End: Complemental strand, 34512985 - 34512827
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||| ||| | ||| ||||||||| |||| |    ||||||| ||||| |||  |||||||| | | |||||||| |||| | ||||| |    
T  34512985 tatggtggaccactcttatggttgatccaccatatacattaa---ggttaaacttaacagtcatgatttatttgactaacggaggcaaatttgagggatc 34512889  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||  |   |||||| |||| ||||||||||||||||| ||| ||||||||  ||||||||    
T  34512888 aaaacatgagttttattaattatgggaccaaaatgaaaactggtaattaattaggggaccaa 34512827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 34147188 - 34147130
Alignment:
Q  260 tgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
    ||||||||||||||||| || |||||| ||||||||||||  || ||| ||||||||||    
T  34147188 tgggaccaaaatgaaaactgaaaattatttgagggaccaaatgacctattaagcctaaa 34147130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 6030337 - 6030378
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  6030337 tagacatgcatgatataacgttcatcttttaataaaaaagat 6030378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 21664867 - 21664815
Alignment:
Q  248 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    |||||| ||||||| |||||||||||||| | |||||||||| | ||||||||    
T  21664867 ttttatgaattgtgtgaccaaaatgaaaacttgaaattaattaaaggaccaac 21664815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 7e-38; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 138 - 298
Target Start/End: Complemental strand, 52240051 - 52239891
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||| |||| || | | |||    
T  52240051 tatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaacccttggaatttatttggcaaacggagaaaaacctgaagaacc 52239952  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||| |||| |||||| |||||||||| |||||| |||| | ||||||| |||||||||||    
T  52239951 aaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaattatttgagggacca 52239891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 2312423 - 2312601
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||  |||||||| ||||||||||||||||  | ||||||    
T  2312423 tatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacggtcatgatttatttggcaaacggaggaaaaagtgagggac 2312522  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
      ||| |||| |||||| ||||||||||| |||||| ||| | |||||||  | ||||||||| ||||| |||||||||    
T  2312523 ttaaacgtacgttttattaattgtgggactaaaatggaaacttgaaattatctaagggaccaatggatcaaataagcct 2312601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 138 - 298
Target Start/End: Original strand, 6349494 - 6349655
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||| ||||||||| |||| ||||||| ||||| |||||  ||||||| |||| || ||||||| |||||  | ||||||    
T  6349494 tatggtggaccactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggac 6349593  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||||||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||    
T  6349594 caaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacca 6349655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 393586 - 393763
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggaccaaaa 241  Q
    ||||||||||||||| ||||||||| ||| ||||  || |  ||||||||||| ||| |||||||||| ||||||||||| ||||  | |||||||||||    
T  393586 tggaccacttttaaggttggtccactataaacat--ttagaattaaagttaacagtccgggatttatttggcaaacggagaaaaaagtgagggaccaaaa 393683  T
Q  242 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 321  Q
    | |||||||||| |||||||||||||||||||||| | ||||||| ||||||||||   ||||| |||||||| ||||||    
T  393684 gatactttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccgttggatcaaataagccaaaaaaa 393763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 141 - 318
Target Start/End: Complemental strand, 6348324 - 6348149
Alignment:
Q  141 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaa 240  Q
    ||||||||||| ||||| ||||||||||||||||||  ||  ||||||| |||||| || | ||||||| | ||||| ||||||||  | ||| ||||||    
T  6348324 ggtggaccactcttaaggttggtccaccatagacat--ttgaggttaaacttaaccatcagaatttatttgacaaacagaggaaaaagtgaggaaccaaa 6348227  T
Q  241 aggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
    |||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||   |||| ||||||||||||    
T  6348226 aggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccatttgatcaaataagcctaaa 6348149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 318
Target Start/End: Complemental strand, 7707763 - 7707582
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| |||||| |||| |||||| |||||| ||||||| |||||||| ||||||||| ||||||| ||||||||| | | ||||    
T  7707763 tatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatttatttggcaaacagaggaaaatgtgatggac 7707664  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
     |||| ||  ||||||| ||||||||||||||||||||||   |||||||| | |||||| ||  |||||||||| ||||||    
T  7707663 taaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggactaaaagatctaataaacctaaa 7707582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 4129117 - 4128989
Alignment:
Q  188 aagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaa 287  Q
    |||||||| ||||||||||||| ||||||||||| ||||  ||||||||||||| |||| |||||| |||||||||||||||||||||| | |||||||     
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaattat 4129018  T
Q  288 ttgagggaccaacggatctaataagccta 316  Q
    |||||| ||||  ||||| ||||||||||    
T  4129017 ttgaggaaccattggatcaaataagccta 4128989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 311
Target Start/End: Original strand, 27850880 - 27851047
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||| || |||||||||       |||||||||||  | ||||||    
T  27850880 tatggtggaccacttttaaggttggtccaccatagacatcatttgaggttaaacttaactgttgggatttat-------acggaggaaaaattgagggac 27850972  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataa 311  Q
    |||||  ||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||  ||||| |||||    
T  27850973 caaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataa 27851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 316
Target Start/End: Complemental strand, 11968685 - 11968507
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||| ||||||||| ||||| |||||||| |||||||||||| || ||||||||| || | ||| |||||||   ||||||||| ||||||| |||||||    
T  11968685 tatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttattttacaaacggagcaaaatctgagggacc 11968586  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||| |||  |||||| ||||||| |||||||||||||| | ||||||| |||||| ||||   |||| ||||||||||    
T  11968585 aaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattatttgaggaaccataagatcaaataagccta 11968507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 138 - 298
Target Start/End: Complemental strand, 1794586 - 1794425
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||| ||||| ||||||||  ||||||||| | ||||| ||||||||  | |||||     
T  1794586 tatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaaccgttaggatttatttgacaaacagaggaaaaagtgagggat 1794487  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||||||||  |||||| ||||||| || ||||||||||| | ||||||| |||||||||||    
T  1794486 caaaaggtatattttattaattgtgagatcaaaatgaaaacttgaaattatttgagggacca 1794425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 2311051 - 2310918
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    |||||||||||| ||  ||||||||| ||||| ||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||||||| | ||||    
T  2311051 gttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaa 2310952  T
Q  284 ttaattgagggaccaacggatctaataagcctaa 317  Q
    ||||||   ||||||  ||||| |||||||||||    
T  2310951 ttaattagaggaccattggatcaaataagcctaa 2310918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 145 - 289
Target Start/End: Complemental strand, 40792914 - 40792774
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||||||||| ||||||||  ||   ||||||||||||  |||||||||||| ||||||||||| ||||||| ||||||||||| ||    
T  40792914 gaccacttttaaggttggtccactatagacat--ttaaagttaaagttaac--tcgggatttatttggcaaacggagaaaaatctgagggaccaaaatgt 40792819  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    |  |||||| |||||||||||||||||||||| |  |||||||||    
T  40792818 atgttttattaattgtgggaccaaaatgaaaacttaaaattaatt 40792774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 1188995 - 1188841
Alignment:
Q  159 ttggtccaccatagacataatttgggttaaa-gttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaat 257  Q
    ||||| ||||||||||||  || |||||||| ||||||  |||||||||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||    
T  1188995 ttggttcaccatagacat--ttagggttaaaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaat 1188898  T
Q  258 tgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |||||||||||||| |||| | ||||||| ||||||||| |  ||||| ||||||||    
T  1188897 tgtgggaccaaaataaaaacttgaaattatttgagggactattggatcaaataagcc 1188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 316
Target Start/End: Complemental strand, 1587307 - 1587178
Alignment:
Q  187 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    |||||||||| |||||||||||| ||||||||||||||||  | |||||||||||||||| |||||| ||||||| ||| |||||||||| |  ||||||    
T  1587307 aaagttaaccatcgggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaatta 1587208  T
Q  287 attgagggaccaacggatctaataagccta 316  Q
     ||||||||||   ||||| ||||||||||    
T  1587207 tttgagggaccgttggatcaaataagccta 1587178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 37884263 - 37884401
Alignment:
Q  182 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 281  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||||||  ||| |||||||||||||| |||||| |||| |||||| |||||||||| |  |    
T  37884263 gggttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaatttaa 37884362  T
Q  282 aattaattgagggaccaacggatctaataagcctaaaaa 320  Q
    ||||| |||||||||||  | ||| |||||||| |||||    
T  37884363 aattatttgagggaccattgaatcaaataagccaaaaaa 37884401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 24426440 - 24426335
Alignment:
Q  211 ggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaata 310  Q
    ||||||||||||||||  | |||||||||||||||| |||||| ||||||| |||||||||||||| | ||||||| |||||||||||  ||||| ||||    
T  24426440 ggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattggatcaaata 24426341  T
Q  311 agccta 316  Q
    ||||||    
T  24426340 agccta 24426335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 297
Target Start/End: Complemental strand, 1829921 - 1829768
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggtt-aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 241  Q
    ||||||||||||||  ||||||||| ||||||||  || | ||| ||||||||| ||||| ||||||| | |||||| |||||||  | |||||| ||||    
T  1829921 tggaccacttttaaagttggtccacgatagacat--ttagagttaaaagttaacagtcggaatttatttgacaaacgtaggaaaaagtgagggactaaaa 1829824  T
Q  242 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacc 297  Q
    | ||| |||||| |||||||||||||||||||||| | ||||||| ||||||||||    
T  1829823 gatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacc 1829768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 298
Target Start/End: Complemental strand, 37882944 - 37882848
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    |||||||| ||||||||||||||||  | |||||||||||||||| |||||| ||||||||||| |||||||||| | ||||||| |||||||||||    
T  37882944 gatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattatttgagggacca 37882848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 138 - 321
Target Start/End: Original strand, 42810146 - 42810328
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||||||||| ||| ||||||||||| ||||||||||||  |  |||||||| |||||     ||||||||| ||||||||||||||||| | ||||||     
T  42810146 tatggtggactactcttaagattggttcaccatagacatc-tgggggttaaacttaacaccaaggatttatttggcaaacggaggaaaatgtgagggact 42810244  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 321  Q
     ||| |||| |||||| |||||||||||||||||||||| | ||||||| || |||||| |  ||||| ||||||  |||||||    
T  42810245 taaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggactattggatcaaataagtataaaaaa 42810328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 10168746 - 10168903
Alignment:
Q  159 ttggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaat 257  Q
    ||||||||||||||||||  |  |||||||||||||| |||  ||||||||| ||||||||||||||||| | |||||| |||| |   ||||||| |||    
T  10168746 ttggtccaccatagacatt-tgggggttaaagttaactgtcatggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaat 10168844  T
Q  258 tgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||||||||||||||||||   |||||||| | | |||||||  |||||||||||||||    
T  10168845 tgtgggaccaaaatgaaaacatgaaattaaataatggaccaaacgatctaataagccta 10168903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 315
Target Start/End: Complemental strand, 42871222 - 42871092
Alignment:
Q  185 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 284  Q
    ||||| ||||| ||| ||||||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||||||||| ||||||||||| | |||||    
T  42871222 ttaaacttaacagtcaggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaat 42871123  T
Q  285 taattgagggaccaacggatctaataagcct 315  Q
    ||||   |||||||  ||||| |||||||||    
T  42871122 taatcaggggaccattggatcaaataagcct 42871092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 138 - 286
Target Start/End: Complemental strand, 52963741 - 52963595
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    |||| |||||||||||||||  |||||||||||||||||  || | |||||||||||| |||| |||||||| | ||||||||| ||||  | |||||||    
T  52963741 tatgatggaccacttttaaggctggtccaccatagacat--ttggagttaaagttaacagtcgagatttatttgacaaacggagaaaaacttgagggacc 52963644  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    ||||  |||  ||||| ||||||| |||||||||||||| | |||||||    
T  52963643 aaaacatacgatttattaattgtgagaccaaaatgaaaacttgaaatta 52963595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 314
Target Start/End: Complemental strand, 390346 - 390215
Alignment:
Q  183 ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaa 282  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||| |  | |||||||||||  ||| |||||| |||||||||||||||||||||| | |||    
T  390346 ggttaaacttaacagtcaggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaa 390247  T
Q  283 attaattgagggaccaacggatctaataagcc 314  Q
    |||| ||  |||||||| | ||| ||||||||    
T  390246 attatttaggggaccaatgaatcaaataagcc 390215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 1831267 - 1831382
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| |  ||| |||||||||  | ||||||||||| |||| |||||| ||||||||||| |||||||||| | |||||||||||||||||||     
T  1831267 gggatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccat 1831366  T
Q  300 cggatctaataagcct 315  Q
     ||||| |||||||||    
T  1831367 tggatcaaataagcct 1831382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 27847808 - 27847697
Alignment:
Q  182 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 281  Q
    |||||||| ||||||||| ||||||||| |||||||||| |||||  ||||||||| |||  ||| |||||| ||||||||||||||||| |||| | ||    
T  27847808 gggttaaacttaaccgtctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaattgtgggaccaaaataaaaacttga 27847709  T
Q  282 aattaattgagg 293  Q
    ||||| ||||||    
T  27847708 aattatttgagg 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 317
Target Start/End: Original strand, 1588044 - 1588210
Alignment:
Q  152 tttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttt 250  Q
    |||||| |||||| ||||||||||| ||||||| ||||| ||||| |||   ||||||| || |||||||||||||  | |||||   ||| |||| |||    
T  1588044 tttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacgtacattt 1588143  T
Q  251 tatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 317  Q
    ||| ||||||||||| |||||||||| |  |||||| ||||||||||||  |||| |||||||||||    
T  1588144 tattaattgtgggactaaaatgaaaacttaaaattatttgagggaccaaaagatcaaataagcctaa 1588210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 42872308 - 42872422
Alignment:
Q  205 ttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggat 304  Q
    ||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||||||||  |||||||  | ||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggaccattgaat 42872407  T
Q  305 ctaataagcctaaaa 319  Q
    | ||||| |||||||    
T  42872408 caaataaacctaaaa 42872422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 10167537 - 10167420
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| | ||||||||||||||| | |||||| |||| | | ||||||| |||||||| |||||||||||||   |||||||| | |||||||||    
T  10167537 gggatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaattaaataagggaccaa 10167438  T
Q  300 cggatctaataagcctaa 317  Q
      ||||||||||||||||    
T  10167437 acgatctaataagcctaa 10167420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 44503643 - 44503778
Alignment:
Q  159 ttggtccaccatagacataatttgggttaaa-gttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaat 257  Q
    ||||| ||||||||||||  || |||||||| |||||| ||||||||||||| ||||||| ||||||||  | ||||||||||| ||||  ||||| |||    
T  44503643 ttggttcaccatagacat--ttagggttaaaagttaacggtcgggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtac-gtttattaat 44503739  T
Q  258 tgtgggaccaaaatgaaaaatggaaattaattgagggac 296  Q
    |||| ||||||||| |||| | ||||||| |||||||||    
T  44503740 tgtgagaccaaaataaaaacttgaaattatttgagggac 44503778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 315
Target Start/End: Original strand, 31968397 - 31968511
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| ||||||| ||||||||  | | ||||||||| |||| |||||| |||||| |||||||||||||||||  |||||||||  ||||||       
T  31968397 ggatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggaccgtt 31968496  T
Q  301 ggatctaataagcct 315  Q
    |||||||||||||||    
T  31968497 ggatctaataagcct 31968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 315
Target Start/End: Complemental strand, 23202020 - 23201843
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    ||||||| |||||| ||||   || ||||||||| |||| ||||   ||||| ||||| || |||||||||| ||||||||||||||||  | |||||||    
T  23202020 tatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgggatttatttggcaaacggaggaaaaggtgagggacc 23201921  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||| |   ||||||| || |||||||||||||| ||||   |||||||| | |||||||||   |||||||||||||    
T  23201920 aaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaattaaataagggaccaaacaatctaataagcct 23201843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 15450017 - 15450194
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||||||||| |||||||  |||||| |||||| ||||||||   |||||||| ||||||||||||||||  |||| |||    
T  15450017 tatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgt-aagatttatttggcaaacggaggaaaaggtaagcgac 15450115  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
      ||| |||| |||||| || |  |||| || ||||||||   ||||||| || ||||||||| | ||| |||||||||    
T  15450116 ttaaacgtacgttttattaactaagggatcataatgaaaacctgaaattatttaagggaccaatgaatcaaataagcct 15450194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 314
Target Start/End: Original strand, 23203904 - 23204071
Alignment:
Q  145 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 244  Q
    ||||||||||||| ||| ||||||||||| ||  || | |||||||||||   | |||||||| | ||||||||||| ||||  | | ||||||||| |     
T  23203904 gaccacttttaaggttgatccaccatagatat--ttagagttaaagttaatacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacgc 23204001  T
Q  245 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
      ||||||| || |||||||||||||||||||   |||||||| | |||||||||  |||||||||||||    
T  23204002 catttttattaaatgtgggaccaaaatgaaaatatgaaattaaataagggaccaaacgatctaataagcc 23204071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 276
Target Start/End: Original strand, 52241105 - 52241235
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    |||||||||||||||  ||||| |||||||| ||  || | |||||||||||| ||||| ||||||| ||||||||||||||||  | ||| | |||||     
T  52241105 tggaccacttttaaggatggtc-accatagatat--ttggagttaaagttaacggtcggaatttatttggcaaacggaggaaaagatgaggaatcaaaac 52241201  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    |||| |||||| |||||||| | |||||||||||    
T  52241202 gtacgttttattaattgtggaatcaaaatgaaaa 52241235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 15449938 - 15449982
Alignment:
Q  92 acactagacatgcatgatctaacaatcatcttttaataaaaaaga 136  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  15449938 acactagacatgcatgatctaacgatcatcttttaataaaaaaga 15449982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 54866619 - 54866754
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    |||||| ||||| |||  |||||||| ||||||||||||||||  |||||||| ||||     ||||||| |||||||| |||||||||||||   ||||    
T  54866619 gttaaacttaacagtcatgatttatttggcaaacggaggaaaacgtaagggactaaaacaccatttttattaattgtgg-accaaaatgaaaatatgaaa 54866717  T
Q  284 ttaattgagggaccaacggatctaataagcctaaaaa 320  Q
    |||| | |||||||||  ||||||||||||| |||||    
T  54866718 ttaaataagggaccaaacgatctaataagccaaaaaa 54866754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 321
Target Start/End: Complemental strand, 33231564 - 33231380
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaacc-gtcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||||||||||||||| |||| || |||||||||||||||  |  |||||||| |||||  ||  | ||||||| ||||||||| | ||||  | |||||    
T  33231564 ttatggtggaccacttctaaggtttgtccaccatagacatt-tgagggttaaacttaacaagtatgaatttatttggcaaacggtgaaaaagatgaggga 33231466  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 321  Q
    | ||||     ||||||| ||||||||||| ||||||||||   |||||||| | |||||||||  ||||||||||||||| ||||    
T  33231465 ctaaaacaccatttttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaaatgatctaataagcctagaaaa 33231380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 50547081 - 50546901
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccg-tcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||||||||||||||| |||| ||  ||| ||||||||||  |  |||||||| ||||| | | |||||||||| ||||||||| ||||||  | |||||    
T  50547081 ttatggtggaccacttctaaggtttatccgccatagacatt-tgagggttaaacttaacaggtagggatttatttggcaaacggtggaaaagatgaggga 50546983  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 317  Q
    | |||| |   ||||||| ||||||||||| |||||||| |   |||||||| | |||||||||  ||||||||| ||||||    
T  50546982 ctaaaacgccatttttattaattgtgggactaaaatgaagacatgaaattaaataagggaccaaatgatctaatacgcctaa 50546901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 31965946 - 31965858
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    ||||||||| ||||||||||||||||  | ||||||||||| |||| |||| | |||||| |||||| ||| |||| | ||||||||||    
T  31965946 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaattaatt 31965858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 44501628 - 44501516
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||| ||| ||||  | ||||||  ||| |||| |||||| |||| |||||||| |||||||| | ||||||| |||||||||||| |    
T  44501628 gatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaatg 44501529  T
Q  302 gatctaataagcc 314  Q
    | || ||||||||    
T  44501528 gttcaaataagcc 44501516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 319
Target Start/End: Original strand, 7708740 - 7708913
Alignment:
Q  146 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 245  Q
    |||||||||||| ||||||||||||||  ||| || | ||||||||||||  | |||||||||| ||||||| ||| ||||  | |||||| |||| |      
T  7708740 accacttttaaggttggtccaccatag--atatttagagttaaagttaacacttgggatttatttggcaaacagagaaaaaggtgagggactaaaacgcc 7708837  T
Q  246 ctttttatcaattgtgggaccaaaatgaaaa---atggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
      |||||| |||||| | |||||||||||||   ||  ||||||| | |||||||||  ||||||||||||||||||    
T  7708838 acttttattaattgtagaaccaaaatgaaaacacat-aaaattaaataagggaccaaacgatctaataagcctaaaa 7708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 33232663 - 33232777
Alignment:
Q  159 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 258  Q
    ||||||||| ||||||||   ||| |||||||||||| |    |||||||| ||||||||||||||||| | |||||| |||| |   ||||||| ||||    
T  33232663 ttggtccacaatagacat---ttgagttaaagttaacggaaaagatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaatt 33232759  T
Q  259 gtgggaccaaaatgaaaa 276  Q
    ||||||||||||| ||||    
T  33232760 gtgggaccaaaataaaaa 33232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 50548228 - 50548303
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    ||||||||| ||||||| ||||||||| | |||||| |||| ||  || |||| ||||||||||||||||||||||    
T  50548228 ggatttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaattgtgggaccaaaatgaaaa 50548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 295
Target Start/End: Complemental strand, 53432235 - 53432079
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||  ||||| ||||  ||||| ||||||||||||  || |||||||| ||||||||| |||||||||| | | |||| ||| |||  | ||||||    
T  53432235 tatggtgagccactcttaaagttggttcaccatagacat--ttggggttaaacttaaccgtcagggatttatttgaccaacgaaggcaaacttgagggac 53432138  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgaggga 295  Q
    |||||  ||  |||||| | || ||||||||||||||||| | |||||||||| |||||    
T  53432137 caaaacataagttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53432079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 1190196 - 1190310
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| ||||||| ||| ||||  | ||| ||  ||| |||| |||||| |||| ||||||||||||||||| |  |||||| ||||||||||||    
T  1190196 gggatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaa 1190295  T
Q  300 cggatctaataagcc 314  Q
     || || ||||||||    
T  1190296 tggttcaaataagcc 1190310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 7053425 - 7053384
Alignment:
Q  96 tagacatgcatgatctaacaatcatcttttaataaaaaagat 137  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  7053425 tagacatgcatgatctaacgatcctcttttaataaaaaagat 7053384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 54484423 - 54484338
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaa-tggaaatta 286  Q
    |||||||| ||||||| ||||||||| | ||||||||||| | || |||||| |||| ||| |||||||| ||||| |||||||||    
T  54484423 gatttatttggcaaacagaggaaaattttagggaccaaaacgaacgttttattaattatggtaccaaaataaaaaattggaaatta 54484338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 669680 - 669748
Alignment:
Q  231 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    ||||||||||| ||   |||||| |||| ||||||||||||||||| || |||||||||| ||||||||    
T  669680 agggaccaaaatgtgagttttattaattatgggaccaaaatgaaaattgaaaattaattgggggaccaa 669748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 4714084 - 4714016
Alignment:
Q  247 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    ||||||| ||||||||||||||||| ||||   |||||||| | |||||||||  ||||||||||||||    
T  4714084 tttttattaattgtgggaccaaaataaaaatatgaaattaaataagggaccaaacgatctaataagcct 4714016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 2311119 - 2311088
Alignment:
Q  145 gaccacttttaagattggtccaccatagacat 176  Q
    ||||||||||||||||||||||||||||||||    
T  2311119 gaccacttttaagattggtccaccatagacat 2311088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 19750237 - 19750275
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacat 176  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  19750237 tatggtggacaacttttaagatttgtccaccatagacat 19750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 19789569 - 19789531
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacat 176  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  19789569 tatggtggacaacttttaagatttgtccaccatagacat 19789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 56085520 - 56085465
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 195  Q
    |||||||||||||| ||||| || |||||||||||||||  || ||||||||||||||    
T  56085520 tatggtggaccactcttaaggttagtccaccatagacat--ttggggttaaagttaac 56085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 3934345 - 3934309
Alignment:
Q  263 gaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||||||| |||||||||||| |||||||||    
T  3934345 gaccaaaatgaaaactggaaattaattaagggaccaa 3934309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 202 - 315
Target Start/End: Complemental strand, 21237 - 21124
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||| |||| |    
T  21237 gatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaaatgaaaattaattgaggggccaatg 21138  T
Q  302 gatctaataagcct 315  Q
    ||||||||||||||    
T  21137 gatctaataagcct 21124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 4e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 141 - 315
Target Start/End: Original strand, 23397301 - 23397473
Alignment:
Q  141 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaa 240  Q
    ||||||| ||||||||| ||||||||||||||||||  ||   |||||| ||||| ||||||||||||| ||||||||||||||||  | |||||| |||    
T  23397301 ggtggactacttttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaa 23397398  T
Q  241 aggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    | |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||    
T  23397399 acgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaaatgatctaataagcct 23397473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 316
Target Start/End: Original strand, 5187564 - 5187742
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 237  Q
    ||||||| |||||||||||| ||||||||| |||||||  |||||||||||| ||||||||| ||||||||| ||||||||||  ||||  ||||| ||     
T  5187564 tatggtgaaccacttttaaggttggtccactatagacaacatttgggttaaacttaaccgtcaggatttatttggcaaacggacaaaaaggtaaggaact 5187663  T
Q  238 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    |||| |   ||||||| |||| |||||||||||||||||   |||||||| | |||||||||   ||||||||||||||    
T  5187664 aaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaacaatctaataagccta 5187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 315
Target Start/End: Original strand, 15730036 - 15730149
Alignment:
Q  203 atttattcggcaaacggaggaaaatctaagggaccaaaaggtacttttt-atcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||  ||||||||| |||||  | ||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  302 gatctaataagcct 315  Q
     |||||||||||||    
T  15730136 aatctaataagcct 15730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 319
Target Start/End: Complemental strand, 23392388 - 23392207
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||||||||| ||| |||||| ||| ||| ||||||| ||||| |||||  |  ||||||||| ||||||||||||||||  | ||||||    
T  23392388 tatggtggaccacttttaaggttgatccaccttag-catcatttggggttaaacttaacatttaggatttatttggcaaacggaggaaaaggtgagggac 23392290  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 319  Q
      ||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||||||    
T  23392289 ttaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaaatgatctaataagcctaaaa 23392207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 137 - 298
Target Start/End: Original strand, 7311666 - 7311826
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||||||||| ||||| ||||| |||||||||||| |||||| ||||| ||||| ||  ||||||||| ||||||  ||  ||||  ||||||||    
T  7311666 ttatggtggaccactcttaaggttggttcaccatagacatcatttggattaaacttaactgtgaggatttatttggcaaatagataaaaaagtaagggac 7311765  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 298  Q
    ||||||||||  ||||| |||||||||| ||||||||||| |  |||||| || ||||||||    
T  7311766 caaaaggtac-gtttattaattgtgggatcaaaatgaaaacttaaaattatttaagggacca 7311826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 17839127 - 17839259
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||  | |||||| |||| |   ||||||| ||||||||||||||||||||||   ||||    
T  17839127 gttaaaattaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacaagaaa 17839226  T
Q  284 ttaattgagggaccaacggatctaataagccta 316  Q
    |||| | |||||||||  |||||||||||||||    
T  17839227 ttaaataagggaccaaacgatctaataagccta 17839259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 316
Target Start/End: Original strand, 29381672 - 29381850
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    ||||||||| |||| ||||| || |||||||| |||||| ||||||| ||||| ||||| || || ||||||| || |||||||||||||  | | ||||    
T  29381672 tatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaactgttgg-atttatttggtaaacggaggaaaagatgaaggac 29381770  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
     |||| ||  ||||||| |||||||||| |||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  29381771 taaaacgtcatttttattaattgtgggatcaaaatgaaaataagaaattaaataagggaccaaacgatctaataagccta 29381850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 138 - 323
Target Start/End: Complemental strand, 17837790 - 17837605
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||  || ||||||||||||||| |||| |||||||| ||||| ||  ||||||||| || ||||||| |||||  | ||||||    
T  17837790 tatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgt-tggatttatttggtaaacggaagaaaagatgagggac 17837692  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaata 323  Q
     |||| |   ||||||| |||||||| |||||||||||||    ||||||| | |||||||||  ||||||||||||| ||||||||    
T  17837691 taaaacgccatttttattaattgtggaaccaaaatgaaaacaataaattaaataagggaccaaacgatctaataagccaaaaaaata 17837605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 232303 - 232174
Alignment:
Q  184 gttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaa 282  Q
    |||||||||||| ||  |||||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| |||    
T  232303 gttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaacgtg--ttttattaattatgggaccaaaatgaaaaattgaa 232206  T
Q  283 attaattgagggaccaacggatctaataagcc 314  Q
    |||| || ||||||||| ||||||| ||||||    
T  232205 attatttaagggaccaatggatctattaagcc 232174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 5186696 - 5186560
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  | | |||  |||| ||   |||||| ||||||| ||||||||||||||   ||||    
T  5186696 gttaaagttaacggtcgggatttatttggcaaacggaggaaaagatgatggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaa 5186597  T
Q  284 ttaattgagggaccaacggatctaataagcctaaaaa 320  Q
    |||| | ||||| |||  |||||||||||||||||||    
T  5186596 ttaaataagggatcaaatgatctaataagcctaaaaa 5186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 143 - 314
Target Start/End: Complemental strand, 29380358 - 29380189
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||| ||||||||| ||| ||||||||| ||||  ||   |||||| ||||| ||||||||||||| |||||||||| |||||  | |||||| ||||     
T  29380358 tggactacttttaaggttgatccaccatatacat--ttgaagttaaaattaacggtcgggatttatttggcaaacggaagaaaaggtgagggactaaaac 29380261  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 314  Q
    |   ||||| | ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||    
T  29380260 gccatttttgttaattgtgggaccaaaatgaaaacaagaaattaaataagggaccaaatgatctaataagcc 29380189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 315
Target Start/End: Original strand, 18346691 - 18346869
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 235  Q
    |||| |||||||||| ||||| ||||| |||| || |||| ||||| ||||||| ||||| ||||| ||||||| ||||||| |||  |||  | |||||    
T  18346691 ttatagtggaccactcttaaggttggttcaccgtaaacatcatttgaggttaaaattaacagtcgg-atttatttggcaaacagagacaaacgtgaggga 18346789  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
     ||||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||    
T  18346790 tcaaaacgccatttttattaattgtgggaccaaaatgaaaatatgaaattaaataagggaccaaatgatctaataagcct 18346869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 315
Target Start/End: Original strand, 6452516 - 6452630
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| ||||||||||||||||  | ||||||  ||| |||| |||||| |||| ||||||||||||||||| | ||||||| ||  ||||||||     
T  6452516 ggatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaat 6452615  T
Q  301 ggatctaataagcct 315  Q
    ||||| |||||||||    
T  6452616 ggatcaaataagcct 6452630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 6701490 - 6701378
Alignment:
Q  202 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 301  Q
    |||||||| ||||||||||||||||| | |||||| ||||     ||||||| ||||||||||||||||||||||   |||||||| | |||||||||      
T  6701490 gatttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaattaaataagggaccaaac 6701391  T
Q  302 gatctaataagcc 314  Q
    |||||||||||||    
T  6701390 gatctaataagcc 6701378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 315
Target Start/End: Complemental strand, 34023982 - 34023883
Alignment:
Q  216 acggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    |||||||||||  | |||||||||||||||| |||||| |||||||| ||||||||||||| |  |||||| |||||||||||   |||| |||||||||    
T  34023982 acggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataagcct 34023883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 6702859 - 6702988
Alignment:
Q  184 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 283  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||||  | |||||  ||| |  | ||||||| ||||||||||||||||||||||   ||||    
T  6702859 gttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggataaaacgcca-tttttattaattgtgggaccaaaatgaaaatatgaaa 6702957  T
Q  284 ttaattgagggaccaacggatctaataagcc 314  Q
    |||| | |||||||||  |||||||||||||    
T  6702958 ttaaataagggaccaaacgatctaataagcc 6702988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 34024055 - 34024160
Alignment:
Q  187 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    |||||||||| |||  | ||||| | ||||||||||||||  | ||||| ||||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  34024055 aaagttaaccatcgaaagttatttgacaaacggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaatta 34024154  T
Q  287 attgag 292  Q
     |||||    
T  34024155 tttgag 34024160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 316
Target Start/End: Original strand, 32506969 - 32507146
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||| ||||||| ||||| ||||||||||||||  ||| || |||||||| ||||| |||  ||||||||| ||||||| ||| ||||| | ||||||    
T  32506969 tatggtagaccactcttaaggttggtccaccatag--atatttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggac 32507066  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
     ||||     ||||||| || ||||||| |||||||||||   |||||||| | || ||||||   ||||||||||||||    
T  32507067 taaaacaccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaataagtgaccaaacaatctaataagccta 32507146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 2687342 - 2687243
Alignment:
Q  200 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
    |||||||||| ||||||||||||||||| | | |||| |||| |   ||||||| |||||||||| |||||||||||   |||||||| | |||||||||    
T  2687342 gggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccatttttattaattgtgggatcaaaatgaaaacatgaaattaaataagggaccaa 2687243  T

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Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 2687929 - 2688044
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| ||||||||||  ||||  | |||||| |||| |   ||||||| ||||||||||| ||||||||||   |||||||| | |||||||||     
T  2687929 ggatttatttggcaaacggataaaaaggtgagggactaaaacgccatttttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaaa 2688028  T
Q  301 ggatctaataagccta 316  Q
     |||||||||||||||    
T  2688029 cgatctaataagccta 2688044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 313
Target Start/End: Complemental strand, 7310443 - 7310275
Alignment:
Q  143 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 242  Q
    ||||||| ||||||| ||||| ||||||||||||  || | |||||| ||||| | || |||||||| || |||||||| |||| || | ||||  |||     
T  7310443 tggaccatttttaaggttggttcaccatagacat--ttggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggacttaaac 7310346  T
Q  243 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 313  Q
     ||| |||||| |||| ||||||||||||||||| |  |||||| || | ||||| | ||||| |||||||    
T  7310345 atacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccgatggatcaaataagc 7310275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 315
Target Start/End: Complemental strand, 6452395 - 6452281
Alignment:
Q  201 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 300  Q
    ||||||||| ||||||||||||||||  | |||||| |||| |||| |||||| |||| | ||||||||| ||||| | ||||||| ||  |||||| |     
T  6452395 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaattatttaggggaccgat 6452296  T
Q  301 ggatctaataagcct 315  Q
    ||||  |||||||||    
T  6452295 ggattaaataagcct 6452281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 233615 - 233683
Alignment:
Q  247 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 315  Q
    ||||||| |||| ||||||||||||||||||| ||||||| || | |||||||  |||||| |||||||    
T  233615 tttttattaattatgggaccaaaatgaaaaattgaaattatttaaaggaccaattgatctattaagcct 233683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 12669896 - 12669809
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccg-tcgggatttattcggcaaacggaggaaaa 226  Q
    |||||||||||||| ||||| ||||||||||||| ||||  ||  ||||||||||||| | | | ||||||||  |||||||||||||||    
T  12669896 tatggtggaccactcttaaggttggtccaccatacacat--ttgaggttaaagttaacagttagagatttatttagcaaacggaggaaaa 12669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 27082192 - 27082234
Alignment:
Q  244 tactttttatcaattgtgggaccaaaatgaaaaatggaaatta 286  Q
    |||||||||| |||||||||||||||||||||| | |||||||    
T  27082192 tactttttattaattgtgggaccaaaatgaaaattcgaaatta 27082234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 311
Target Start/End: Complemental strand, 29722814 - 29722664
Alignment:
Q  159 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 258  Q
    ||||||||| ||| ||||  ||||| ||||| ||||| || | |||||||| |  ||| |||||||||| | |||||| |||| |   ||||||| ||||    
T  29722814 ttggtccacaatatacat--tttggattaaatttaacagttgagatttatttgcaaaatggaggaaaatgtgagggactaaaacgccatttttattaatt 29722717  T
Q  259 gtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataa 311  Q
     ||||| |||||||||||   |||||||| | |||||||||  ||||||||||    
T  29722716 atgggatcaaaatgaaaacatgaaattaaataagggaccaaatgatctaataa 29722664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 299
Target Start/End: Original strand, 43516 - 43678
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||| ||||| ||||||||| ||| ||||| ||||||||||||||||  | ||||||    
T  43516 tatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcaggacttatttggcaaacggaggaaaaagtgagggac 43615  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 299  Q
      |||  ||| |||||| |||| |||||||||||| |||| |  |||||| ||||||||||||    
T  43616 ttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattatttgagggaccaa 43678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 42506 - 42443
Alignment:
Q  213 caaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 276  Q
    ||||||||| ||||||| | ||||||||| ||||||||||| |||||||| ||| |||| ||||    
T  42506 caaacggagaaaaatctgaaggaccaaaacgtactttttattaattgtggaaccgaaatcaaaa 42443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 289
Target Start/End: Complemental strand, 108687 - 108536
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||||||||| ||||||||||||| | || ||||||| ||||| ||||| |   ||||||||| |||||| |||||||||  | |||||     
T  108687 tatggtggaccacttttaaggttggtccaccata-atattatttggggttaaacttaactgcaaggatttatttggcaaatggaggaaaaaatgagggat 108589  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 289  Q
    ||||| |||| |||||| |||| ||||| ||||||| ||||||||||||||||    
T  108588 caaaacgtacgttttattaattatgggatcaaaatgtaaaatggaaattaatt 108536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 151 - 316
Target Start/End: Original strand, 109702 - 109865
Alignment:
Q  151 ttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttt 250  Q
    ||||||| ||||||||||||| ||||  ||   |||||||||||  || |||||| ||| ||||||  ||| ||||  | |||||| |||| |||| |||    
T  109702 ttttaaggttggtccaccatatacat--ttgaagttaaagttaatagttgggattcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttt 109799  T
Q  251 tatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 316  Q
    ||| |||||| ||||||||||||||| | ||||||| || ||||||||  | ||| ||||||||||    
T  109800 tattaattgtaggaccaaaatgaaaacttgaaattatttaagggaccattgaatcaaataagccta 109865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 320
Target Start/End: Original strand, 63073 - 63255
Alignment:
Q  137 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaaggga 235  Q
    ||||||||||||| | ||||||||| |||| |||||||||  ||   |||||| ||||| ||| |||||||||| ||||||||||| ||||| | |||||    
T  63073 ttatggtggaccattcttaagattgatccatcatagacat--ttgaagttaaacttaacagtcagggatttatttggcaaacggagaaaaatgtgaggga 63170  T
Q  236 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 320  Q
    | |||| |   | ||||| ||||||||||||||||||||||   ||||||| |||  |||||||  |||||||||| ||||||||    
T  63171 ctaaaacgccatctttattaattgtgggaccaaaatgaaaacacgaaattatttggaggaccaaacgatctaataaacctaaaaa 63255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 1149 - 1207
Alignment:
Q  260 tgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 318  Q
    ||||||||||||||||| ||||||||| ||||||||||||  || ||| ||||||||||    
T  1149 tgggaccaaaatgaaaactggaaattatttgagggaccaaatgacctattaagcctaaa 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 317
Target Start/End: Complemental strand, 127606 - 127428
Alignment:
Q  138 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 236  Q
    |||||||||||||| ||||| ||| | ||||||||||||  ||  ||||||||||||| ||| |||||||||| | |  ||||||| |||  | ||||||    
T  127606 tatggtggaccactcttaaggttgtttcaccatagacat--ttgaggttaaagttaactgtcagggatttatttgaccgacggaggcaaacatgagggac 127509  T
Q  237 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 317  Q
    |||||  |   |||||| | || ||||||||||| ||||| | ||||||||||  ||||||||  || ||| |||||||||    
T  127508 caaaacatgagttttattagttatgggaccaaaacgaaaacttgaaattaattaggggaccaaatgacctattaagcctaa 127428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 731 - 776
Alignment:
Q  182 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaat 227  Q
    |||||||||||||| ||| ||||||||  |||||||||||||||||    
T  731 gggttaaagttaacagtcaggatttatatggcaaacggaggaaaat 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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