View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_193 (Length: 282)
Name: NF8260A_low_193
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_193 |
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Alignment Details
Target: chr4 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 164052 - 164331
Alignment:
| Q |
1 |
aagaatatcagtagtggatagagattcaacagacatggctgagagtgttcaaaaaatatggatcaagttcgttgttatgcaaaagctcatgataccataa |
100 |
Q |
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| T |
164052 |
aagaatatcagtagtggatagagattcaacagacatggctgagagtgttcaaaaaatatggatcaagttcgttgttatgcaaaagctcatgataccataa |
164151 |
T |
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| Q |
101 |
aaagggttagaaatgaactattgagttgcattagaatgaaagaacgctttatataaatagcactgtcagttactgcaatgttaggaacaaatacatacaa |
200 |
Q |
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| T |
164152 |
aaagggttagaaatgaactattgagttgcattagaatgaaagaacgctttatataaatagcactgtcagttactgcaatgttaggaacaaatacatacaa |
164251 |
T |
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| Q |
201 |
gtaggaacataacgaatctccatgataacagttaaagaattctaattataaaccataatagaaagcttataactagtgat |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
164252 |
gtaggaacataacgaatctccatgataacagttaaagaattctaattataaaccataatagaaagcttataactagtgat |
164331 |
T |
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