View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_202 (Length: 279)
Name: NF8260A_low_202
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_202 |
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Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 5946556 - 5946818
Alignment:
| Q |
11 |
aaagaaagaaaaaacatttatttatgttcagaacaatccatgtacatatatttacattcatttgaacctatcaccttaataacaattgtttatgcatcta |
110 |
Q |
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| T |
5946556 |
aaagaaaggaaaaacatttatttatgttcagaacaatccatgtacatatatttacattcatttcaacctatcaccttaataacaattgtttatgcatcta |
5946655 |
T |
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| Q |
111 |
agtggccaacatatgaattttccttcaaatcagcaaagaacattaaccttagtacattaacattttcactaaccaagatacagaaggtatgcatttattt |
210 |
Q |
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| T |
5946656 |
agtggccaacatatgaattttccttcaaatcagtaaagaacattaaccttagtacattacaattttcactatccaagatacagaaggtatgcatttattt |
5946755 |
T |
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| Q |
211 |
ttgttctttttaattcaaatgcttaacagatagctgattttaaatctcgtctgttgtcaagtt |
273 |
Q |
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| T |
5946756 |
ttgttctttttaattcaaatgcttaacagatagctgattttaaatctcgtctgttgtcaagtt |
5946818 |
T |
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