View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_260 (Length: 254)
Name: NF8260A_low_260
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_260 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 32103469 - 32103698
Alignment:
| Q |
6 |
gaagaatatatagtgagtgaggaagaggaaaagaaaatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagatt |
105 |
Q |
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| T |
32103469 |
gaagaatatatagtgagtgaggaagaggaaaagaaaatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagatt |
32103568 |
T |
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| Q |
106 |
gcaccgcagcctgcaacatgttttgaagcttactgcctaatggagatggagccgccattctttattcattcagtcattaccaaacagttttttctttcat |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32103569 |
gcaccgcagcctgcaacatgttttgaagcttactgcctaatggagatggagcagccattctttattcattcagtcattaccaaacagttttttctttcat |
32103668 |
T |
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| Q |
206 |
ttctctgcaatatttaatcatatctaaaac |
235 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32103669 |
ttctctgcaatatttaatcatatctaaaac |
32103698 |
T |
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