View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_282 (Length: 250)
Name: NF8260A_low_282
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_282 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 2727694 - 2727939
Alignment:
| Q |
1 |
ctgacagtataaaaaatctttacactatcggtgcatatacggaattagatccttatagttat--ggaagtttcacgtgctacaattcatacctacctaat |
98 |
Q |
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| T |
2727694 |
ctgacagtataaaaaatctttacactgtcggtgcatatacggaattaaatccttatagttatatggaagtttcacgtgctacaattcataccttcctaat |
2727793 |
T |
|
| Q |
99 |
ccaaatggcaagttagggccaccaacagaattatttctagatgtcctaaggagtaaagtaccaagcaatatcaaaggaaatgccaaatttcccaaaagat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2727794 |
ccaaatggcaagttagggccaccaacagaattatttctagatgtcctaaggagtaaagtaccaagcaatatcaaaggaaatgccaaatttcccaaaagat |
2727893 |
T |
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| Q |
199 |
caagcaatgcaactccccaatttgtatccataggataaacaccaaa |
244 |
Q |
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|||| | ||||||||||||||||||||||||||||||||||||||| |
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| T |
2727894 |
caagtattgcaactccccaatttgtatccataggataaacaccaaa |
2727939 |
T |
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