View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_298 (Length: 248)
Name: NF8260A_low_298
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_298 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 36171561 - 36171783
Alignment:
| Q |
1 |
gctacaatattttatagtgtatgcatttgtaaataatgtgtggtaccacatgggggaagacatacatctatctatatcaatacttggtaagcatgtgagt |
100 |
Q |
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| T |
36171561 |
gctacaatattttatagtgtatgcatttgtaaatagtgtgtggtaccacatgggggaagacatacatctatctatatcaatacttggtaagcatgtgagt |
36171660 |
T |
|
| Q |
101 |
ggtgtcaacattgcttttctatatccagcattttatattacaaagcagatggtgatagatgaagtttccatctgtattgtttttgtctctttgtaaagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36171661 |
ggtgtcaacattgcttttctatatccagcattttatattacaaagcagatagtgatagatgaagtttccatctgtattgtttttgtctctttgtaaagtt |
36171760 |
T |
|
| Q |
201 |
ttgtactttgttatagctacttc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
36171761 |
ttgtactttgttatagctacttc |
36171783 |
T |
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