View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_335 (Length: 242)
Name: NF8260A_low_335
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_335 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 14801654 - 14801843
Alignment:
| Q |
20 |
tgttcatattaggaaaacgcttccatttacaataataaacaatttaagaagctccatttgcaataattgtgatcacacagccacataagactcatttaat |
119 |
Q |
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| T |
14801654 |
tgttcatattaggaaaacgcttccatttacaataataaacaatttaagaagctccatttgcaataattgtgatcacacagccacataagactcatttaat |
14801753 |
T |
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| Q |
120 |
ctcataaggattgaatttttattcaagttctgctttggttttgattcaatttttgttgttgatcataacggtattttgcctggtacttaa |
209 |
Q |
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| T |
14801754 |
ctcataaggattgaatttttattcaagttctgctttggttttgattcaatttttgttgttgatcataacggtattttgcctggtacttaa |
14801843 |
T |
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