View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_353 (Length: 239)
Name: NF8260A_low_353
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_353 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 33202862 - 33203090
Alignment:
| Q |
4 |
atcaaaaagcccctctcacgctcttcactttcacaaactaaagcaacgaacgagagcaattctcatcacaacaaaggcattatcataacaataacatctt |
103 |
Q |
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| T |
33202862 |
atcaaaaagcccctctcactctcttcactttcacaaactaaagcaacgaacgagagcaattctcatcacagcaaaggcattatcataacaataacatctt |
33202961 |
T |
|
| Q |
104 |
ttctcattttcttacctttctcctatagccagcaatgagagttcctcctcctgcagtttcctcctcgtcgtcgtcaccacaaccaaaactcgccaccact |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
33202962 |
ttctcattttcttacctttctcctatagccagcaatgagagttcctcctcctgcagtttcctcctcgtcgtcgtcaccacaaccaaaactcaccaccact |
33203061 |
T |
|
| Q |
204 |
caaaacatcgtcgttaacgtcccaactcc |
232 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
33203062 |
caaaacatcgtcgttaacgtcccaactcc |
33203090 |
T |
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