View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_438 (Length: 227)
Name: NF8260A_low_438
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_438 |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 30025528 - 30025340
Alignment:
| Q |
34 |
ataaacgaccaaggtcttgacagttgacacagtatcattgaagtgtaaaaagctatgaatccctactttctcctttttattctactagtcaataccgtgg |
133 |
Q |
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| T |
30025528 |
ataaactaccaaggtcttcacagttgacacagtatcattgaagtgtaaaaagctatgaatccctactttctcctttttattctactagtcaataccgtcg |
30025429 |
T |
|
| Q |
134 |
tttgattcaaatttgttttctcattatatactttcttggattctgtttgctgttggagttccaagtcctgtttgttttaagttgtttct |
222 |
Q |
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| T |
30025428 |
tttgattcaaatttgttttctcattatatactttcttggattctgtttgttgttggagttccaagtcctgtttgttttaagttgtttct |
30025340 |
T |
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