View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8260A_low_451 (Length: 225)

Name: NF8260A_low_451
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8260A_low_451
NF8260A_low_451
[»] chr7 (29 HSPs)
chr7 (95-225)||(7915766-7915896)
chr7 (9-74)||(15329273-15329338)
chr7 (9-74)||(48880927-48880992)
chr7 (9-74)||(3961979-3962044)
chr7 (9-74)||(4974735-4974800)
chr7 (9-74)||(15577850-15577915)
chr7 (9-74)||(42611811-42611876)
chr7 (9-74)||(45637712-45637777)
chr7 (11-74)||(24394972-24395035)
chr7 (9-74)||(20010098-20010162)
chr7 (9-74)||(34482835-34482900)
chr7 (9-74)||(35444558-35444623)
chr7 (9-75)||(25167850-25167916)
chr7 (9-74)||(37477080-37477145)
chr7 (9-74)||(15238382-15238447)
chr7 (9-74)||(18036978-18037043)
chr7 (10-71)||(36790467-36790528)
chr7 (9-75)||(29737138-29737204)
chr7 (116-217)||(8409535-8409636)
chr7 (120-217)||(8411016-8411113)
chr7 (9-70)||(25167655-25167715)
chr7 (9-70)||(35445603-35445663)
chr7 (9-74)||(42696083-42696148)
chr7 (9-70)||(48880726-48880786)
chr7 (8-70)||(36790275-36790337)
chr7 (9-62)||(20009905-20009958)
chr7 (9-46)||(30848597-30848634)
chr7 (9-70)||(30848775-30848835)
chr7 (191-223)||(8448299-8448331)
[»] scaffold0178 (1 HSPs)
scaffold0178 (9-74)||(11621-11686)
[»] chr3 (47 HSPs)
chr3 (9-74)||(6041884-6041949)
chr3 (9-74)||(2754717-2754782)
chr3 (9-74)||(3574527-3574592)
chr3 (9-74)||(37217053-37217118)
chr3 (10-74)||(11347268-11347332)
chr3 (9-74)||(42297353-42297419)
chr3 (9-74)||(3137414-3137479)
chr3 (9-74)||(3456064-3456129)
chr3 (9-74)||(30385011-30385076)
chr3 (9-74)||(33113793-33113858)
chr3 (9-74)||(37522053-37522118)
chr3 (9-74)||(48160905-48160970)
chr3 (9-75)||(19650900-19650966)
chr3 (9-74)||(34482910-34482975)
chr3 (9-73)||(9797029-9797093)
chr3 (9-75)||(8320584-8320650)
chr3 (9-74)||(22426344-22426409)
chr3 (9-74)||(33145713-33145777)
chr3 (13-63)||(42921154-42921204)
chr3 (9-74)||(33839531-33839596)
chr3 (9-74)||(36865027-36865092)
chr3 (9-70)||(40328037-40328098)
chr3 (9-65)||(33839741-33839797)
chr3 (20-75)||(41224232-41224287)
chr3 (9-74)||(8362045-8362110)
chr3 (9-74)||(24343547-24343612)
chr3 (9-70)||(36864831-36864892)
chr3 (10-62)||(47738117-47738169)
chr3 (11-74)||(26612785-26612848)
chr3 (37-71)||(40327878-40327912)
chr3 (9-70)||(3137213-3137273)
chr3 (9-70)||(8361838-8361898)
chr3 (9-70)||(33145918-33145978)
chr3 (9-70)||(34482687-34482747)
chr3 (9-62)||(47738317-47738370)
chr3 (43-74)||(47402630-47402661)
chr3 (17-70)||(3456278-3456330)
chr3 (9-70)||(3574325-3574385)
chr3 (9-70)||(9796828-9796888)
chr3 (9-70)||(19650699-19650759)
chr3 (9-70)||(22426144-22426204)
chr3 (9-70)||(30385606-30385666)
chr3 (9-70)||(33114000-33114060)
chr3 (9-70)||(37522259-37522319)
chr3 (9-70)||(41224440-41224500)
chr3 (9-46)||(41883223-41883260)
chr3 (9-62)||(46919100-46919153)
[»] chr8 (52 HSPs)
chr8 (9-74)||(26042116-26042181)
chr8 (9-74)||(32064745-32064810)
chr8 (9-74)||(34665382-34665447)
chr8 (9-74)||(17841850-17841915)
chr8 (9-74)||(20091801-20091866)
chr8 (9-74)||(24211553-24211618)
chr8 (9-74)||(32393858-32393923)
chr8 (9-74)||(40780129-40780194)
chr8 (9-74)||(42755042-42755107)
chr8 (10-74)||(15187560-15187624)
chr8 (9-71)||(8453837-8453899)
chr8 (9-74)||(1645965-1646030)
chr8 (9-74)||(35353041-35353106)
chr8 (9-66)||(38016979-38017036)
chr8 (9-73)||(14128865-14128929)
chr8 (9-74)||(31347782-31347847)
chr8 (9-70)||(37986055-37986116)
chr8 (9-74)||(39772801-39772866)
chr8 (9-74)||(6108233-6108298)
chr8 (9-74)||(7017865-7017930)
chr8 (9-74)||(37132658-37132723)
chr8 (9-73)||(27782117-27782181)
chr8 (9-75)||(30835047-30835112)
chr8 (9-74)||(41819778-41819843)
chr8 (9-69)||(25581239-25581299)
chr8 (9-64)||(7021988-7022043)
chr8 (20-74)||(27835464-27835518)
chr8 (9-70)||(3890413-3890474)
chr8 (9-70)||(6108032-6108092)
chr8 (17-70)||(24844866-24844919)
chr8 (9-70)||(37132479-37132540)
chr8 (11-62)||(30834862-30834913)
chr8 (9-70)||(1503642-1503702)
chr8 (9-70)||(17841649-17841709)
chr8 (9-70)||(25581038-25581098)
chr8 (9-70)||(26041912-26041972)
chr8 (9-70)||(32064952-32065012)
chr8 (5-70)||(38017135-38017199)
chr8 (9-70)||(40779928-40779988)
chr8 (30-74)||(30055543-30055587)
chr8 (11-62)||(1886621-1886672)
chr8 (9-63)||(35353247-35353300)
chr8 (9-46)||(3817930-3817967)
chr8 (9-46)||(3890616-3890653)
chr8 (9-70)||(10044554-10044614)
chr8 (9-70)||(14129065-14129125)
chr8 (9-70)||(20091600-20091660)
chr8 (9-70)||(30055722-30055782)
chr8 (9-70)||(31347575-31347635)
chr8 (9-70)||(34665587-34665647)
chr8 (9-70)||(37985855-37985915)
chr8 (10-46)||(3597042-3597078)
[»] chr6 (23 HSPs)
chr6 (9-74)||(17176021-17176086)
chr6 (9-74)||(17705465-17705530)
chr6 (9-74)||(33695327-33695392)
chr6 (9-74)||(33696696-33696761)
chr6 (9-74)||(6127275-6127340)
chr6 (9-74)||(18365573-18365638)
chr6 (9-74)||(18370837-18370902)
chr6 (9-74)||(23291084-23291149)
chr6 (9-74)||(28675148-28675213)
chr6 (9-75)||(25986929-25986995)
chr6 (9-74)||(6031741-6031806)
chr6 (10-74)||(18889698-18889761)
chr6 (9-68)||(11548588-11548647)
chr6 (9-71)||(8515725-8515787)
chr6 (9-75)||(32702206-32702270)
chr6 (9-70)||(34238886-34238946)
chr6 (10-70)||(29693652-29693712)
chr6 (10-70)||(32702412-32702471)
chr6 (9-74)||(2309423-2309488)
chr6 (9-74)||(9752245-9752309)
chr6 (9-70)||(17705268-17705328)
chr6 (9-70)||(28675354-28675414)
chr6 (9-46)||(29693478-29693515)
[»] chr4 (42 HSPs)
chr4 (9-74)||(10442789-10442854)
chr4 (9-74)||(22199261-22199326)
chr4 (9-74)||(31078819-31078884)
chr4 (9-74)||(49387888-49387953)
chr4 (11-74)||(36072947-36073010)
chr4 (9-74)||(2624837-2624902)
chr4 (9-74)||(21802322-21802387)
chr4 (9-74)||(24128239-24128304)
chr4 (9-74)||(33530688-33530753)
chr4 (9-74)||(47290066-47290131)
chr4 (9-73)||(7745112-7745176)
chr4 (11-74)||(4751446-4751509)
chr4 (9-74)||(24392667-24392732)
chr4 (9-70)||(36073354-36073415)
chr4 (9-74)||(44893426-44893491)
chr4 (9-74)||(53123030-53123096)
chr4 (9-74)||(23964465-23964530)
chr4 (9-74)||(46441844-46441909)
chr4 (9-74)||(50156578-50156643)
chr4 (20-74)||(37934952-37935006)
chr4 (9-74)||(44893213-44893279)
chr4 (9-68)||(42671675-42671734)
chr4 (9-70)||(11314050-11314111)
chr4 (9-70)||(25063373-25063434)
chr4 (9-62)||(42671874-42671927)
chr4 (9-46)||(9088898-9088935)
chr4 (9-70)||(9089076-9089136)
chr4 (9-70)||(21802119-21802179)
chr4 (9-70)||(36073555-36073615)
chr4 (9-62)||(37219837-37219890)
chr4 (9-70)||(46442050-46442110)
chr4 (9-62)||(50156386-50156438)
chr4 (9-70)||(53123237-53123297)
chr4 (10-70)||(17655637-17655697)
chr4 (10-70)||(24128446-24128505)
chr4 (9-61)||(36073743-36073795)
chr4 (20-70)||(47290283-47290332)
chr4 (9-70)||(10442586-10442646)
chr4 (9-42)||(17655462-17655495)
chr4 (9-70)||(31078618-31078678)
chr4 (9-70)||(44893012-44893072)
chr4 (9-70)||(44893632-44893692)
[»] chr1 (37 HSPs)
chr1 (9-74)||(40214988-40215053)
chr1 (9-74)||(9910293-9910358)
chr1 (9-70)||(16045798-16045859)
chr1 (9-74)||(44094698-44094763)
chr1 (11-74)||(32000269-32000332)
chr1 (9-74)||(18404442-18404507)
chr1 (9-74)||(19015404-19015469)
chr1 (9-74)||(25463676-25463741)
chr1 (9-74)||(36966708-36966773)
chr1 (9-74)||(37821834-37821899)
chr1 (9-71)||(3559620-3559682)
chr1 (9-74)||(6883487-6883552)
chr1 (9-74)||(41876442-41876507)
chr1 (9-74)||(25973414-25973478)
chr1 (9-74)||(40273702-40273767)
chr1 (9-74)||(27523255-27523322)
chr1 (12-70)||(52064376-52064434)
chr1 (9-70)||(25973613-25973673)
chr1 (9-70)||(37821633-37821693)
chr1 (9-70)||(19015610-19015670)
chr1 (37-74)||(34519758-34519795)
chr1 (9-62)||(44690828-44690881)
chr1 (37-74)||(51620980-51621017)
chr1 (9-70)||(51737711-51737771)
chr1 (10-74)||(44691030-44691094)
chr1 (20-70)||(6883704-6883753)
chr1 (9-62)||(9910098-9910150)
chr1 (9-62)||(19722906-19722958)
chr1 (9-70)||(20304929-20304989)
chr1 (9-70)||(32000065-32000125)
chr1 (9-70)||(33786430-33786490)
chr1 (9-70)||(33786635-33786695)
chr1 (9-70)||(40215194-40215254)
chr1 (9-70)||(40273914-40273974)
chr1 (21-70)||(41876241-41876289)
chr1 (37-74)||(52329319-52329356)
chr1 (26-70)||(27523054-27523098)
[»] scaffold0471 (2 HSPs)
scaffold0471 (9-74)||(12842-12907)
scaffold0471 (10-70)||(13049-13108)
[»] scaffold0096 (1 HSPs)
scaffold0096 (9-74)||(41011-41076)
[»] scaffold0085 (1 HSPs)
scaffold0085 (9-74)||(47850-47915)
[»] chr5 (30 HSPs)
chr5 (9-74)||(2477636-2477701)
chr5 (9-74)||(6043511-6043576)
chr5 (9-74)||(11361131-11361196)
chr5 (11-74)||(3362778-3362841)
chr5 (11-74)||(38899728-38899791)
chr5 (9-74)||(4892202-4892267)
chr5 (9-70)||(8145379-8145440)
chr5 (9-74)||(14138668-14138733)
chr5 (9-74)||(22913054-22913119)
chr5 (9-74)||(25398238-25398303)
chr5 (9-74)||(33584329-33584394)
chr5 (11-74)||(12850801-12850864)
chr5 (9-75)||(37321793-37321860)
chr5 (9-74)||(3522006-3522071)
chr5 (9-74)||(4434007-4434072)
chr5 (9-74)||(12614733-12614798)
chr5 (9-74)||(17545685-17545750)
chr5 (20-70)||(27481830-27481880)
chr5 (9-62)||(10458409-10458462)
chr5 (9-70)||(4892408-4892468)
chr5 (9-70)||(33584128-33584188)
chr5 (11-70)||(3362987-3363045)
chr5 (11-70)||(12851010-12851068)
chr5 (11-70)||(38899524-38899583)
chr5 (9-70)||(3521806-3521866)
chr5 (9-70)||(6043311-6043371)
chr5 (9-70)||(8145579-8145639)
chr5 (37-74)||(13664642-13664679)
chr5 (9-70)||(22912856-22912916)
chr5 (9-57)||(27482029-27482077)
[»] chr2 (28 HSPs)
chr2 (9-74)||(7475508-7475573)
chr2 (9-74)||(9293576-9293641)
chr2 (9-74)||(21936081-21936146)
chr2 (9-74)||(23268062-23268127)
chr2 (9-74)||(35160757-35160822)
chr2 (9-73)||(10661888-10661952)
chr2 (10-74)||(13354846-13354910)
chr2 (9-71)||(31174834-31174896)
chr2 (9-75)||(33380206-33380272)
chr2 (9-74)||(14941366-14941431)
chr2 (9-74)||(43330912-43330977)
chr2 (9-75)||(9723404-9723470)
chr2 (9-74)||(27847632-27847697)
chr2 (9-70)||(22592918-22592979)
chr2 (9-72)||(21393688-21393751)
chr2 (9-70)||(10662094-10662154)
chr2 (9-70)||(7475307-7475367)
chr2 (9-70)||(9293374-9293434)
chr2 (9-62)||(9723612-9723665)
chr2 (9-70)||(21393485-21393544)
chr2 (9-62)||(22591494-22591547)
chr2 (9-70)||(33380413-33380473)
chr2 (9-70)||(35160965-35161025)
chr2 (11-70)||(31174634-31174692)
chr2 (37-71)||(40262714-40262748)
chr2 (9-46)||(3989104-3989141)
chr2 (9-70)||(23267861-23267921)
chr2 (10-70)||(3989283-3989342)
[»] scaffold0204 (1 HSPs)
scaffold0204 (9-74)||(4396-4461)
[»] scaffold0665 (1 HSPs)
scaffold0665 (9-73)||(3069-3133)
[»] scaffold0228 (5 HSPs)
scaffold0228 (9-63)||(8413-8467)
scaffold0228 (9-63)||(15995-16049)
scaffold0228 (9-63)||(25947-26001)
scaffold0228 (9-70)||(16190-16250)
scaffold0228 (9-70)||(26142-26202)


Alignment Details
Target: chr7 (Bit Score: 107; Significance: 9e-54; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 95 - 225
Target Start/End: Complemental strand, 7915896 - 7915766
Alignment:
Q  95 aatttaatatcagaaattacatcatgttgagaatgacaattcacaaagaacttattcttagagcagtaacaagattaaaattaaacaatggcaacatgaa 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||  ||||    
T  7915896 aatttaatatcagaaattccatcatgttgagaatgacaattcacaaagaacttattcttagagcagtaacaagattaccattcaacaatggcaagctgaa 7915797  T
Q  195 cacagtttcttctatgataacaacttctatt 225  Q
    |||||||||||||||||||||||||||||||    
T  7915796 cacagtttcttctatgataacaacttctatt 7915766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 15329338 - 15329273
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15329273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 48880927 - 48880992
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 48880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 3962044 - 3961979
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3962044 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 4974735 - 4974800
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4974735 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 4974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15577850 - 15577915
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15577850 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15577915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 42611876 - 42611811
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42611876 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 45637777 - 45637712
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45637777 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 45637712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 24395035 - 24394972
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 24394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 20010098 - 20010162
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20010098 gattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 20010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 34482900 - 34482835
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  34482900 gattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcattgctc 34482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 35444623 - 35444558
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  35444623 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctc 35444558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 25167850 - 25167916
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    |||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  25167850 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattgctcc 25167916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37477080 - 37477145
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  37477080 gattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctc 37477145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 15238447 - 15238382
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| ||||||||| ||| | |||||||||||||||||||||||    
T  15238447 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 15238382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 18037043 - 18036978
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| || ||||||||| |||||||||||||||||||| ||||||||    
T  18037043 gattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctc 18036978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 36790467 - 36790528
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    ||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  36790467 attattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcattg 36790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 29737204 - 29737138
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    |||||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||| ||||    
T  29737204 gattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattactcc 29737138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 8409535 - 8409636
Alignment:
Q  116 tcatgttgagaatgacaattcacaaagaacttattcttagagcagtaacaagattaaaattaaacaatggcaacatgaacacagtttcttctatgataac 215  Q
    |||||||||||||||||||| | ||  |||||||||||||||||| ||||||||||   || |||||| | ||  |||||| |||||||||| |||||||    
T  8409535 tcatgttgagaatgacaattgaaaattaacttattcttagagcagcaacaagattatctttcaacaatagaaagttgaacaaagtttcttctttgataac 8409634  T
Q  216 aa 217  Q
    ||    
T  8409635 aa 8409636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 8411016 - 8411113
Alignment:
Q  120 gttgagaatgacaattcacaaagaacttattcttagagcagtaacaagattaaaattaaacaatggcaacatgaacacagtttcttctatgataacaa 217  Q
    ||||||||||||| || |||||||||||||||||||||||| ||||||||||  ||| |||||| ||| | |||||| ||  | |||||||| |||||    
T  8411016 gttgagaatgacagttgacaaagaacttattcttagagcagcaacaagattatcattcaacaatagcagcctgaacaaagcattttctatgacaacaa 8411113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25167715 - 25167655
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25167715 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 35445603 - 35445663
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  35445603 gattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 42696148 - 42696083
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  ||||||||||| |||  || || |||||||||||||||||||||| ||||||||    
T  42696148 gattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattgctc 42696083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 48880786 - 48880726
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  48880786 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 48880726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 36790337 - 36790275
Alignment:
Q  8 agattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||| ||||||||||||||||||  ||| ||||||||| | || ||||||| |||||||    
T  36790337 agattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcatt 36790275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 20009958 - 20009905
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| ||||||||||||||||||  ||| ||||||||||| ||| ||||||    
T  20009958 gattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatat 20009905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 30848634 - 30848597
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgata 46  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  30848634 gattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 30848775 - 30848835
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||| | |||||||||| |||||||    
T  30848775 gattattgtgccatgtcattcttgaatttttctt-ataaaagcattcttgatatctagcatt 30848835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 8448299 - 8448331
Alignment:
Q  191 tgaacacagtttcttctatgataacaacttcta 223  Q
    |||||| ||||||||||||||||||||||||||    
T  8448299 tgaacaaagtttcttctatgataacaacttcta 8448331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 11686 - 11621
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 2e-29; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 6041949 - 6041884
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6041884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2754782 - 2754717
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2754782 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 2754717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3574527 - 3574592
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3574527 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37217053 - 37217118
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37217053 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 37217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 11347332 - 11347268
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11347332 attattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11347268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 42297419 - 42297353
Alignment:
Q  9 gattattct-gtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42297419 gattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 42297353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3137414 - 3137479
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3137414 gattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 3137479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 3456129 - 3456064
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3456129 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 30385076 - 30385011
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  30385076 gattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctc 30385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33113858 - 33113793
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33113858 gattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 33113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 37522118 - 37522053
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||    
T  37522118 gattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctc 37522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 48160970 - 48160905
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48160970 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 48160905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 19650900 - 19650966
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  19650900 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctcc 19650966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 34482910 - 34482975
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34482910 gattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 34482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 9797029 - 9797093
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  9797029 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattgct 9797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 8320584 - 8320650
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    ||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  8320584 gattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattgctcc 8320650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 22426344 - 22426409
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||| ||||||||    
T  22426344 gattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctc 22426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33145777 - 33145713
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||||||||||    
T  33145777 gattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcattgctc 33145713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 42921204 - 42921154
Alignment:
Q  13 attctgtcatgtcattcttgaaattttcttgataaaatctttcttgatata 63  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  42921204 attcggtcatgtcattcttaaaattttcttgataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33839596 - 33839531
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||||||||| |||||| || |||| ||||||||||||||||| ||||||| ||||||||    
T  33839596 gattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattgctc 33839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 36865027 - 36865092
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||  |||||||||||| |||||||||| |||||||||| ||| ||||||||||||||||    
T  36865027 gattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattgctc 36865092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 40328037 - 40328098
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  40328037 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 40328098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 33839741 - 33839797
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatata 65  Q
    ||||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  33839741 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 41224287 - 41224232
Alignment:
Q  20 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||    
T  41224287 catgtcattcttgaatttttcttgagaaaatctttcttaatatatagcagtgctcc 41224232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 8362045 - 8362110
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| ||||||||| |   | |||||||||||||||||||||||    
T  8362045 gattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattgctc 8362110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 24343612 - 24343547
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| | | | ||||| |||||||||||||||||||||| ||||||||||||||||    
T  24343612 gattattctgccatattaattttgaatttttcttgataaaatctttcttaatatatagcattgctc 24343547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 36864892 - 36864831
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  ||| ||||||||||| |||||||||| |||||||    
T  36864892 gattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcatt 36864831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 47738169 - 47738117
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  47738169 attattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 26612848 - 26612785
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| ||||||||||||||| |||| || ||||||||||| ||||||||||  |||||||    
T  26612848 ttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatataatattgctc 26612785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattg 71  Q
    |||||||||||||||||||||||||||||||||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3137273 - 3137213
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3137273 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 3137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 8361898 - 8361838
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  8361898 gattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 8361838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 33145918 - 33145978
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33145918 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 33145978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 34482747 - 34482687
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  34482747 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 34482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 47738317 - 47738370
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  47738317 gattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 74
Target Start/End: Original strand, 47402630 - 47402661
Alignment:
Q  43 gataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||    
T  47402630 gataaaatctttcttgatatatagcattgctc 47402661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 3456278 - 3456330
Alignment:
Q  17 tgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  3456278 tgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 3456330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3574385 - 3574325
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  3574385 gattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3574325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 9796888 - 9796828
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  9796888 gattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 9796828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 19650759 - 19650699
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  19650759 gattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 19650699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 22426204 - 22426144
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  22426204 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 22426144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 30385606 - 30385666
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  30385606 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatttagcatt 30385666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 33114000 - 33114060
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33114000 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 33114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37522259 - 37522319
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  37522259 gattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 37522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 41224440 - 41224500
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  41224440 gattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 41224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 41883223 - 41883260
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgata 46  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  41883223 gattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 46919100 - 46919153
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    |||||||||| ||||||||| |||||  ||| ||||||||||| ||||||||||    
T  46919100 gattattctgccatgtcattattgaatcttttttgataaaatcattcttgatat 46919153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 6e-27; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 26042116 - 26042181
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctc 26042181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 32064810 - 32064745
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32064810 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 32064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 34665447 - 34665382
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34665447 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17841850 - 17841915
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17841850 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 17841915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 20091801 - 20091866
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20091801 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 24211553 - 24211618
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24211553 gattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 32393923 - 32393858
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32393923 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 32393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 40780129 - 40780194
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40780129 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 40780194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 42755042 - 42755107
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42755042 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctc 42755107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 15187624 - 15187560
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15187560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 8453899 - 8453837
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8453899 gattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 8453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 1645965 - 1646030
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1645965 gattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctc 1646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 35353106 - 35353041
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  35353106 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 35353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 38017036 - 38016979
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatag 66  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38017036 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatag 38016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 14128929 - 14128865
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  14128929 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 31347782 - 31347847
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  31347782 gattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattgctc 31347847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37986055 - 37986116
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37986055 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 39772801 - 39772866
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  39772801 gattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctc 39772866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6108233 - 6108298
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||||||||||| ||||||||    
T  6108233 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctc 6108298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7017865 - 7017930
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| ||||||| | |||||||||| ||||||||||||||||||    
T  7017865 gattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctc 7017930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37132658 - 37132723
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| || ||||||||||||||| ||| |||||||||||||||||||    
T  37132658 gattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattgctc 37132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 27782117 - 27782181
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    |||||||||| ||||||||| |||||  |||||||||||||| ||||||||||||||||||||||    
T  27782117 gattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 30835047 - 30835112
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    |||||||||| ||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||    
T  30835047 gattattctgccatgtcattcttgaattttt-tcgataaaatctttcttgatatataacattgctcc 30835112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 41819778 - 41819843
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| |||||||| |||  |||||||||||||||||||||||||||| ||||||||    
T  41819778 gattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctc 41819843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 25581239 - 25581299
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 69  Q
    ||||||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  25581239 gattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 7022043 - 7021988
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatat 64  Q
    |||||||||| ||| ||||||||||| ||||||||| |||||||||||||||||||    
T  7022043 gattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 27835464 - 27835518
Alignment:
Q  20 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||    
T  27835464 catgtcattcttgaatttttcttaataagatctttattgatatatagcattgctc 27835518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3890474 - 3890413
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||||||  ||||||||||||||| |||||||||| |||||||    
T  3890474 gattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcatt 3890413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 6108092 - 6108032
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6108092 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 6108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 24844866 - 24844919
Alignment:
Q  17 tgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||| |||||||    
T  24844866 tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcatt 24844919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 37132540 - 37132479
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||| ||||  ||||||||||||||| |||||||||| |||||||    
T  37132540 gattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatt 37132479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 30834913 - 30834862
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  30834913 ttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatat 30834862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 1503702 - 1503642
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  1503702 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 1503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 17841709 - 17841649
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  17841709 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 17841649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25581098 - 25581038
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25581098 gattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 26041972 - 26041912
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  26041972 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 32064952 - 32065012
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  32064952 gattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 32065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 38017135 - 38017199
Alignment:
Q  5 ggtagattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||| |||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  38017135 ggtaaattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 38017199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 40779988 - 40779928
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  40779988 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 40779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 30055587 - 30055543
Alignment:
Q  30 ttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||    
T  30055587 ttgaaatttttttgataaaatcttccttggtatatagcattgctc 30055543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    |||||||| || ||||||||||||  ||||||||||||||| ||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 35353247 - 35353300
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatata 63  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||||    
T  35353247 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatata 35353300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 3817930 - 3817967
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgata 46  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  3817930 gattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 3890616 - 3890653
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgata 46  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  3890616 gattattctgccatgtcattcttgaatttttcttgata 3890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 10044554 - 10044614
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  10044554 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 10044614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 14129065 - 14129125
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  14129065 gattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcatt 14129125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 20091660 - 20091600
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  20091660 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 20091600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 30055722 - 30055782
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  30055722 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 30055782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 31347635 - 31347575
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  31347635 gattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 31347575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 34665587 - 34665647
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  34665587 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 34665647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 37985915 - 37985855
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  37985915 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 37985855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 3597042 - 3597078
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgata 46  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  3597042 attattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17176021 - 17176086
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17176021 gattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctc 17176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17705465 - 17705530
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17705465 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 17705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33695327 - 33695392
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33695327 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 33695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33696761 - 33696696
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33696761 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 33696696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 6127340 - 6127275
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6127340 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 6127275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18365573 - 18365638
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18365573 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 18365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18370837 - 18370902
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18370837 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 18370902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23291084 - 23291149
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23291084 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 23291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 28675213 - 28675148
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28675213 gattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 28675148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 25986995 - 25986929
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25986995 gattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcc 25986929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6031741 - 6031806
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  6031741 gattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctc 6031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 18889698 - 18889761
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18889698 attattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctc 18889761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 11548588 - 11548647
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagca 68  Q
    |||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  11548588 gattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 8515725 - 8515787
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    |||||||||| |||||||||||| ||  | |||||||||||||||||||||||||||||||||    
T  8515725 gattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 32702270 - 32702206
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    |||||||||| ||| ||||||||||||||||| ||| ||||||||||||||  ||||||||||||||    
T  32702270 gattattctgccatatcattcttgaaattttcatgaaaaaatctttcttga--tatagcattgctcc 32702206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 34238946 - 34238886
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||||| | |||||||||||||| |||||||||| |||||||    
T  34238946 gattattgtgtcatgtcattcttgaa-tcttcttgataaaatcattcttgatatctagcatt 34238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 29693652 - 29693712
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||| |||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  29693652 attattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatt 29693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 32702412 - 32702471
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32702412 attattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 32702471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 2309423 - 2309488
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||| ||||||| |||   | ||||||||||||||||||||||||| ||||||||    
T  2309423 gattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctc 2309488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 9752245 - 9752309
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| ||||||||||| |||||||||| || | |||||||||||||| ||||||||    
T  9752245 gattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgctc 9752309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 17705328 - 17705268
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  17705328 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 17705268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 28675354 - 28675414
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  28675354 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 28675414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 29693515 - 29693478
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgata 46  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  29693515 gattattctgtcatgtcattcttgaatatttcttgata 29693478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 10442789 - 10442854
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442789 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 10442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 22199326 - 22199261
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22199326 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 22199261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 31078819 - 31078884
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31078819 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 31078884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 49387888 - 49387953
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387888 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 49387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 36073010 - 36072947
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 36072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2624902 - 2624837
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2624902 gattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 2624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 21802322 - 21802387
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21802322 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 21802387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 24128304 - 24128239
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24128304 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 24128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33530688 - 33530753
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctc 33530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47290131 - 47290066
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47290131 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 47290066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 7745112 - 7745176
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7745112 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 4751509 - 4751446
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 4751446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 24392732 - 24392667
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  24392732 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 24392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 36073415 - 36073354
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36073415 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 44893491 - 44893426
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  44893491 gattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctc 44893426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 53123096 - 53123030
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttctt-gataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  53123096 gattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctc 53123030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23964465 - 23964530
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  23964465 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctc 23964530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 46441909 - 46441844
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||| || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  46441909 gattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 46441844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 50156578 - 50156643
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  50156578 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctc 50156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 37934952 - 37935006
Alignment:
Q  20 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  37934952 catgtcattcttgacatttttttgataaaatcttttttgatatatagcattgctc 37935006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 44893213 - 44893279
Alignment:
Q  9 gattattctgtcatgtcattcttgaaa-ttttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||    
T  44893213 gattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctc 44893279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 42671734 - 42671675
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagca 68  Q
    |||||||||| |||||||||||| || |||| |||||||||||||| |||||||||||||    
T  42671734 gattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 11314111 - 11314050
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||| |  ||||||||||||||| |||||||||| |||||||    
T  11314111 gattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcatt 11314050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25063434 - 25063373
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||  |||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  25063434 gattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 42671874 - 42671927
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  42671874 gattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 42671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 9088935 - 9088898
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgata 46  Q
    |||||||||| |||||||||||||||||||||||||||    
T  9088935 gattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 9089076 - 9089136
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  9089076 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 9089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 21802179 - 21802119
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  21802179 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 21802119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 36073555 - 36073615
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  36073555 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 36073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 37219837 - 37219890
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    |||||||||| |||||||||||| ||  ||||||||||||||| ||||||||||    
T  37219837 gattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 46442050 - 46442110
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  46442050 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 46442110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 50156438 - 50156386
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  50156438 gattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 50156386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 53123237 - 53123297
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  53123237 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 53123297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 17655637 - 17655697
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||| ||||||||||||||| ||  ||||||||||||||| ||||| |||| |||||||    
T  17655637 attattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatt 17655697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 24128446 - 24128505
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  24128446 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 24128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 36073743 - 36073795
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgata 61  Q
    ||||||| ||||||||||||||| ||  |||||| ||||||||||||||||||    
T  36073743 gattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 47290283 - 47290332
Alignment:
Q  20 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  47290283 catgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 47290332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 10442646 - 10442586
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  10442646 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 10442586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 17655495 - 17655462
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttctt 42  Q
    |||||||||| |||||||||||||||||||||||    
T  17655495 gattattctgccatgtcattcttgaaattttctt 17655462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 31078678 - 31078618
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||| |||||| || |||||||| |||||||||| |||||||    
T  31078678 gattattgtgccatgtcattcttg-aattttttttataaaatcattcttgatatctagcatt 31078618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 44893072 - 44893012
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  44893072 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 44893632 - 44893692
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  44893632 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 40215053 - 40214988
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40215053 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 40214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 9910293 - 9910358
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9910293 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 9910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 16045798 - 16045859
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16045798 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 44094763 - 44094698
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44094763 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 32000269 - 32000332
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 32000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 18404507 - 18404442
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18404507 gattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 18404442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 19015469 - 19015404
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19015469 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 19015404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25463741 - 25463676
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  25463741 gattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctc 25463676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 36966708 - 36966773
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36966708 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 36966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37821834 - 37821899
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37821834 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 37821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 3559682 - 3559620
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  3559682 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattg 3559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 6883552 - 6883487
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  6883552 gattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattgctc 6883487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 41876442 - 41876507
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  41876442 gattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctc 41876507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25973478 - 25973414
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  25973478 gattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctc 25973414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 40273767 - 40273702
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||| || ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  40273767 gattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctc 40273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 27523255 - 27523322
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttga--tatatagcattgctc 74  Q
    ||||||||||||||||||||||| || |||||||||||||||  |||||||  |||||||||||||||    
T  27523255 gattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtatatagcattgctc 27523322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 52064434 - 52064376
Alignment:
Q  12 tattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||||||||||||  ||||||||||||||| || ||||||| |||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcatt 52064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 25973613 - 25973673
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25973613 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25973673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 37821693 - 37821633
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  37821693 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 37821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 19015610 - 19015670
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  19015610 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcatt 19015670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 34519795 - 34519758
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||| |||||||||||||||||||||||||||||||    
T  34519795 tttcttaataaaatctttcttgatatatagcattgctc 34519758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 44690881 - 44690828
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    |||||||||| |||||||||||||||  ||||||||||||||| || |||||||    
T  44690881 gattattctgccatgtcattcttgaatctttcttgataaaatcattattgatat 44690828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 51621017 - 51620980
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||| |||||||||||||||||||||||||||||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctc 51620980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 51737711 - 51737771
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  51737711 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 51737771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 44691030 - 44691094
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| ||||| |||||||||  ||| || |||||||||||||||||||| | ||||||||    
T  44691030 attattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacattgctc 44691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 6883704 - 6883753
Alignment:
Q  20 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6883704 catgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 6883753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 9910150 - 9910098
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  9910150 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 9910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 19722958 - 19722906
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  19722958 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 19722906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 20304989 - 20304929
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  20304989 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 20304929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 32000125 - 32000065
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  32000125 gattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 32000065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 33786490 - 33786430
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  33786490 gattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 33786430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 33786635 - 33786695
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  33786635 gattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 33786695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 40215194 - 40215254
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  40215194 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 40215254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 40273914 - 40273974
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  40273914 gattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 40273974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 41876289 - 41876241
Alignment:
Q  21 atgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  41876289 atgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 41876241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 52329356 - 52329319
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  52329356 tttcttgataaattctttcttgatatataacattgctc 52329319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 27523098 - 27523054
Alignment:
Q  26 attcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||  ||||||||||||||| ||||||||||||| ||||    
T  27523098 attcttgaatctttcttgataaaatcattcttgatatataacatt 27523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 12907 - 12842
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12907 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 12842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 13049 - 13108
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  13049 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 13108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 41076 - 41011
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41076 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 41011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47915 - 47850
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47915 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctc 47850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2477701 - 2477636
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2477701 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 2477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6043511 - 6043576
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6043511 gattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6043576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 11361131 - 11361196
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11361131 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 3362841 - 3362778
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 3362778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 38899728 - 38899791
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 38899791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 4892267 - 4892202
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  4892267 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 4892202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 8145440 - 8145379
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8145440 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 14138733 - 14138668
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14138733 gattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctc 14138668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 22913054 - 22913119
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  22913054 gattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattgctc 22913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25398303 - 25398238
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  25398303 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 25398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33584329 - 33584394
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  33584329 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33584394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 12850864 - 12850801
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  12850864 ttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctc 12850801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 37321793 - 37321860
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttctt-gatatatagcattgctcc 75  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  37321793 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctcc 37321860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3522006 - 3522071
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||    
T  3522006 gattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctc 3522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 4434007 - 4434072
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  4434007 gattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 4434072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 12614733 - 12614798
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  12614733 gattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcattgctc 12614798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17545685 - 17545750
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| ||||||||| ||| | |||||||||||||||||||||||    
T  17545685 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 17545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 27481880 - 27481830
Alignment:
Q  20 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 10458462 - 10458409
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| || ||||||||||||||| ||||||||||||||| |||||||||||    
T  10458462 gattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 4892408 - 4892468
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4892408 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 4892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 33584188 - 33584128
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33584188 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 3362987 - 3363045
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3362987 ttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 12851010 - 12851068
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  12851010 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 12851068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 38899583 - 38899524
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||| || ||||||||||||||| |||| || |||||||| |||||||||| |||||||    
T  38899583 ttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatt 38899524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3521866 - 3521806
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3521866 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3521806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 6043371 - 6043311
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  6043371 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 6043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8145579 - 8145639
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  8145579 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 8145639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 13664679 - 13664642
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  13664679 tttcttgataaaatctttcttaatatataacattgctc 13664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 22912916 - 22912856
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  22912916 gattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 22912856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 27482029 - 27482077
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttctt 57  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||| |||||    
T  27482029 gattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7475508 - 7475573
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7475508 gattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 7475573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 9293576 - 9293641
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9293576 gattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctc 9293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 21936146 - 21936081
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21936146 gattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 21936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23268062 - 23268127
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23268062 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 23268127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 35160822 - 35160757
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35160822 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 35160757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 10661952 - 10661888
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10661952 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 13354910 - 13354846
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 13354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 31174834 - 31174896
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  31174834 gattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattg 31174896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 33380272 - 33380206
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    |||||||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33380272 gattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctcc 33380206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 14941366 - 14941431
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  14941366 gattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcattgctc 14941431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 43330977 - 43330912
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  43330977 gattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctc 43330912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 9723470 - 9723404
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcc 75  Q
    ||||||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||||||||||    
T  9723470 gattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattgctcc 9723404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 27847697 - 27847632
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||| ||||| ||||||||||    
T  27847697 gattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctc 27847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 22592918 - 22592979
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  22592918 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 21393688 - 21393751
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgc 72  Q
    |||||||||  |||||||||||| || ||||||||| ||||| |||||||||||||||||||||    
T  21393688 gattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattgc 21393751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 10662094 - 10662154
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  10662094 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 10662154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 7475367 - 7475307
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  7475367 gattattatgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 7475307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 9293434 - 9293374
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293434 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 9293374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 9723612 - 9723665
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||||||||||||||||| ||  ||||||||| ||||| ||||||||||    
T  9723612 gattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatat 9723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 21393544 - 21393485
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| |||||||||||||||| |||||||||||| ||||| |||||||||| |||||||    
T  21393544 gattattgtgtcatgtcattcttg-aattttcttgat-aaatcattcttgatatctagcatt 21393485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 62  Q
    |||||||||| ||| ||||||||||| |||| || |||||||||||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 33380413 - 33380473
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33380413 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33380473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 35160965 - 35161025
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  35160965 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 31174692 - 31174634
Alignment:
Q  11 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  31174692 ttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 31174634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 40262714 - 40262748
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattg 71  Q
    ||||||||||||||||||||||||||||| |||||    
T  40262714 tttcttgataaaatctttcttgatatataacattg 40262748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 3989141 - 3989104
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgata 46  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  3989141 gattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 23267921 - 23267861
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  23267921 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 23267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 3989283 - 3989342
Alignment:
Q  10 attattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  3989283 attattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 4461 - 4396
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  4461 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 3133 - 3069
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  3133 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 8467 - 8413
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8467 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16049 - 15995
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16049 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 26001 - 25947
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26001 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 16190 - 16250
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  16190 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 16250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 26142 - 26202
Alignment:
Q  9 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  26142 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University