View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8260A_low_5 (Length: 623)

Name: NF8260A_low_5
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8260A_low_5
NF8260A_low_5
[»] chr7 (45 HSPs)
chr7 (175-474)||(41078704-41079005)
chr7 (502-623)||(41077599-41077720)
chr7 (250-426)||(32254987-32255164)
chr7 (255-428)||(41079784-41079954)
chr7 (255-426)||(32256344-32256513)
chr7 (250-388)||(43460765-43460903)
chr7 (255-431)||(47454330-47454504)
chr7 (250-427)||(13564181-13564358)
chr7 (314-432)||(35664287-35664405)
chr7 (250-426)||(22335977-22336153)
chr7 (299-427)||(47456366-47456494)
chr7 (258-424)||(11501180-11501344)
chr7 (296-426)||(22538836-22538966)
chr7 (250-339)||(40811405-40811494)
chr7 (176-249)||(40811528-40811601)
chr7 (314-425)||(45455378-45455489)
chr7 (294-433)||(47059099-47059238)
chr7 (313-430)||(33096863-33096980)
chr7 (313-428)||(6173455-6173570)
chr7 (250-427)||(11502363-11502541)
chr7 (258-426)||(43459453-43459619)
chr7 (314-430)||(32602927-32603043)
chr7 (314-433)||(30333276-30333395)
chr7 (255-426)||(40812562-40812731)
chr7 (19-65)||(41075337-41075383)
chr7 (264-427)||(22337329-22337489)
chr7 (274-428)||(30310117-30310270)
chr7 (343-426)||(30334672-30334755)
chr7 (250-425)||(40508377-40508551)
chr7 (250-401)||(47060419-47060568)
chr7 (258-428)||(13562818-13562986)
chr7 (250-431)||(22537552-22537733)
chr7 (250-398)||(40509677-40509824)
chr7 (179-249)||(45454216-45454285)
chr7 (314-398)||(4300054-4300138)
chr7 (250-398)||(22115107-22115254)
chr7 (468-504)||(41078655-41078691)
chr7 (182-249)||(669231-669298)
chr7 (249-311)||(43441460-43441520)
chr7 (250-434)||(3413522-3413705)
chr7 (370-432)||(40811332-40811394)
chr7 (313-410)||(45454052-45454149)
chr7 (360-435)||(30311521-30311596)
chr7 (250-307)||(2414863-2414918)
chr7 (360-428)||(33779136-33779204)
[»] scaffold1152 (1 HSPs)
scaffold1152 (257-427)||(2426-2594)
[»] chr3 (42 HSPs)
chr3 (257-431)||(53622655-53622830)
chr3 (249-435)||(38242457-38242643)
chr3 (249-427)||(3208481-3208659)
chr3 (296-429)||(18197142-18197275)
chr3 (250-426)||(10732071-10732247)
chr3 (255-428)||(40244183-40244353)
chr3 (255-427)||(38240903-38241072)
chr3 (255-438)||(27837906-27838086)
chr3 (296-401)||(34818109-34818214)
chr3 (271-427)||(53624326-53624480)
chr3 (257-431)||(10730878-10731050)
chr3 (314-428)||(50810840-50810954)
chr3 (314-428)||(50864910-50865024)
chr3 (250-427)||(53614215-53614392)
chr3 (250-408)||(12107921-12108083)
chr3 (314-429)||(50809416-50809531)
chr3 (314-429)||(50866331-50866446)
chr3 (257-429)||(26887506-26887676)
chr3 (250-381)||(27841652-27841783)
chr3 (250-428)||(35370909-35371081)
chr3 (257-434)||(41263628-41263803)
chr3 (177-249)||(36176374-36176445)
chr3 (296-388)||(53612907-53612999)
chr3 (274-398)||(53194837-53194960)
chr3 (250-388)||(53420352-53420490)
chr3 (312-417)||(38247480-38247585)
chr3 (255-388)||(35372108-35372238)
chr3 (297-388)||(40745455-40745546)
chr3 (372-410)||(10301882-10301920)
chr3 (199-249)||(28909466-28909516)
chr3 (314-427)||(36176512-36176626)
chr3 (314-432)||(37735298-37735416)
chr3 (314-423)||(18458663-18458772)
chr3 (250-425)||(34819227-34819401)
chr3 (316-388)||(37736089-37736161)
chr3 (250-426)||(41264595-41264771)
chr3 (312-388)||(53421765-53421841)
chr3 (375-410)||(10340036-10340071)
chr3 (314-429)||(23443463-23443578)
chr3 (313-423)||(41544663-41544773)
chr3 (313-398)||(40364345-40364430)
chr3 (360-428)||(3209983-3210051)
[»] scaffold0031 (2 HSPs)
scaffold0031 (250-425)||(125174-125350)
scaffold0031 (250-433)||(123960-124141)
[»] scaffold0077 (2 HSPs)
scaffold0077 (250-430)||(54126-54307)
scaffold0077 (257-401)||(52615-52757)
[»] chr5 (26 HSPs)
chr5 (255-427)||(325134-325304)
chr5 (250-410)||(27705258-27705418)
chr5 (249-427)||(22047729-22047908)
chr5 (250-424)||(39603853-39604028)
chr5 (250-427)||(30859113-30859291)
chr5 (250-430)||(30910735-30910916)
chr5 (312-429)||(34894144-34894261)
chr5 (263-401)||(39605426-39605562)
chr5 (323-429)||(34898966-34899072)
chr5 (250-411)||(8521268-8521427)
chr5 (312-417)||(24503191-24503296)
chr5 (257-401)||(30857823-30857965)
chr5 (258-426)||(30912114-30912280)
chr5 (250-428)||(33173903-33174080)
chr5 (250-428)||(1010308-1010484)
chr5 (250-430)||(22308742-22308921)
chr5 (312-410)||(24509040-24509138)
chr5 (180-246)||(27705156-27705221)
chr5 (294-431)||(22049122-22049259)
chr5 (249-338)||(15548323-15548413)
chr5 (367-425)||(41798006-41798064)
chr5 (372-411)||(32757838-32757877)
chr5 (250-307)||(1102736-1102791)
chr5 (250-307)||(4127196-4127251)
chr5 (374-428)||(10978345-10978399)
chr5 (357-411)||(20538066-20538120)
[»] chr8 (42 HSPs)
chr8 (250-432)||(32798474-32798656)
chr8 (249-427)||(44076303-44076482)
chr8 (249-426)||(45281130-45281306)
chr8 (253-398)||(42870839-42870985)
chr8 (275-410)||(4810483-4810619)
chr8 (250-428)||(32695216-32695395)
chr8 (255-429)||(42100055-42100227)
chr8 (250-427)||(13117575-13117752)
chr8 (250-429)||(42098558-42098737)
chr8 (255-428)||(13116326-13116497)
chr8 (259-401)||(32693853-32693993)
chr8 (176-249)||(45281025-45281097)
chr8 (314-430)||(28418800-28418916)
chr8 (249-409)||(22551022-22551180)
chr8 (313-431)||(26696525-26696643)
chr8 (257-398)||(45279706-45279845)
chr8 (296-427)||(17339537-17339668)
chr8 (250-428)||(42872133-42872309)
chr8 (258-423)||(41629709-41629872)
chr8 (314-427)||(28420180-28420293)
chr8 (317-426)||(32797136-32797245)
chr8 (177-249)||(26696709-26696780)
chr8 (250-388)||(8571559-8571697)
chr8 (314-427)||(17338038-17338151)
chr8 (177-249)||(4810673-4810744)
chr8 (250-321)||(42877722-42877791)
chr8 (312-426)||(8570116-8570230)
chr8 (249-427)||(30786673-30786851)
chr8 (312-425)||(211594-211707)
chr8 (312-425)||(240549-240662)
chr8 (312-425)||(725217-725330)
chr8 (312-425)||(793904-794017)
chr8 (372-428)||(38697070-38697126)
chr8 (271-401)||(26697797-26697925)
chr8 (314-388)||(6397819-6397893)
chr8 (250-307)||(24192606-24192661)
chr8 (199-249)||(34504533-34504583)
chr8 (343-411)||(17702310-17702378)
chr8 (296-388)||(30787588-30787680)
chr8 (182-249)||(416413-416480)
chr8 (250-288)||(38696443-38696481)
chr8 (250-310)||(31845738-31845795)
[»] chr1 (38 HSPs)
chr1 (250-444)||(41873914-41874107)
chr1 (250-427)||(45584950-45585128)
chr1 (257-429)||(49802846-49803016)
chr1 (250-430)||(15232746-15232926)
chr1 (253-401)||(15072736-15072883)
chr1 (255-407)||(27814309-27814460)
chr1 (299-436)||(46111479-46111616)
chr1 (250-409)||(16965068-16965228)
chr1 (285-426)||(52628850-52628991)
chr1 (260-410)||(50444651-50444800)
chr1 (304-431)||(15234037-15234164)
chr1 (250-427)||(16963831-16964006)
chr1 (250-398)||(35943390-35943537)
chr1 (249-432)||(49801609-49801792)
chr1 (323-427)||(52627512-52627617)
chr1 (249-427)||(14470853-14471030)
chr1 (325-428)||(34351973-34352076)
chr1 (250-427)||(23091348-23091525)
chr1 (313-429)||(15071337-15071453)
chr1 (313-401)||(44278354-44278442)
chr1 (313-428)||(24499660-24499775)
chr1 (360-411)||(51042394-51042445)
chr1 (255-365)||(46110341-46110449)
chr1 (250-430)||(15746709-15746888)
chr1 (295-401)||(44276145-44276251)
chr1 (250-338)||(44999405-44999492)
chr1 (250-426)||(14477734-14477909)
chr1 (177-249)||(44278217-44278288)
chr1 (250-401)||(48096975-48097124)
chr1 (182-249)||(12665997-12666064)
chr1 (372-411)||(20064189-20064228)
chr1 (250-316)||(34350219-34350286)
chr1 (176-246)||(6049261-6049331)
chr1 (250-288)||(9226158-9226196)
chr1 (250-288)||(13147359-13147397)
chr1 (314-427)||(41872573-41872686)
chr1 (312-388)||(16123323-16123399)
chr1 (375-411)||(20069954-20069990)
[»] chr2 (34 HSPs)
chr2 (250-428)||(29219381-29219560)
chr2 (250-428)||(29332680-29332859)
chr2 (257-426)||(17460635-17460802)
chr2 (250-431)||(18616947-18617129)
chr2 (250-431)||(6030412-6030593)
chr2 (250-410)||(11317310-11317470)
chr2 (249-427)||(43033079-43033255)
chr2 (260-426)||(17459251-17459418)
chr2 (253-411)||(11315946-11316102)
chr2 (297-432)||(28562798-28562933)
chr2 (254-427)||(32469145-32469319)
chr2 (297-430)||(18615510-18615643)
chr2 (297-426)||(29220865-29220994)
chr2 (297-426)||(29334164-29334293)
chr2 (250-410)||(42641803-42641962)
chr2 (265-427)||(7437718-7437880)
chr2 (176-249)||(6030306-6030378)
chr2 (255-433)||(32470524-32470700)
chr2 (257-432)||(1082980-1083153)
chr2 (314-410)||(43034477-43034573)
chr2 (312-428)||(6030601-6030717)
chr2 (314-425)||(34468957-34469068)
chr2 (255-353)||(6028787-6028884)
chr2 (315-410)||(28561382-28561477)
chr2 (345-431)||(7436460-7436546)
chr2 (250-426)||(1085330-1085504)
chr2 (250-338)||(11547745-11547834)
chr2 (343-411)||(2277504-2277572)
chr2 (315-431)||(44192453-44192569)
chr2 (182-249)||(30748686-30748753)
chr2 (250-411)||(34512827-34512985)
chr2 (372-430)||(34147130-34147188)
chr2 (360-412)||(21664815-21664867)
chr2 (182-246)||(30749166-30749230)
[»] chr4 (56 HSPs)
chr4 (250-410)||(52239891-52240051)
chr4 (250-427)||(2312423-2312601)
chr4 (250-410)||(6349494-6349655)
chr4 (255-433)||(393586-393763)
chr4 (253-430)||(6348149-6348324)
chr4 (250-430)||(7707582-7707763)
chr4 (300-428)||(4128989-4129117)
chr4 (250-423)||(27850880-27851047)
chr4 (250-428)||(11968507-11968685)
chr4 (250-410)||(1794425-1794586)
chr4 (296-429)||(2310918-2311051)
chr4 (257-401)||(40792774-40792914)
chr4 (271-426)||(1188841-1188995)
chr4 (299-428)||(1587178-1587307)
chr4 (176-248)||(15449910-15449982)
chr4 (294-432)||(37884263-37884401)
chr4 (323-428)||(24426335-24426440)
chr4 (255-409)||(1829768-1829921)
chr4 (177-249)||(7053384-7053456)
chr4 (314-410)||(37882848-37882944)
chr4 (250-433)||(42810146-42810328)
chr4 (271-428)||(10168746-10168903)
chr4 (297-427)||(42871092-42871222)
chr4 (250-398)||(52963595-52963741)
chr4 (295-426)||(390215-390346)
chr4 (312-427)||(1831267-1831382)
chr4 (294-405)||(27847697-27847808)
chr4 (264-429)||(1588044-1588210)
chr4 (317-431)||(42872308-42872422)
chr4 (312-429)||(10167420-10167537)
chr4 (271-408)||(44503643-44503778)
chr4 (313-427)||(31968397-31968511)
chr4 (250-427)||(23201843-23202020)
chr4 (250-427)||(15450017-15450194)
chr4 (257-426)||(23203904-23204071)
chr4 (179-249)||(42872169-42872238)
chr4 (255-388)||(52241105-52241235)
chr4 (296-432)||(54866619-54866754)
chr4 (249-433)||(33231380-33231564)
chr4 (249-429)||(50546901-50547081)
chr4 (313-401)||(31965858-31965946)
chr4 (314-426)||(44501516-44501628)
chr4 (258-431)||(7708740-7708913)
chr4 (271-388)||(33232663-33232777)
chr4 (313-388)||(50548228-50548303)
chr4 (250-407)||(53432079-53432235)
chr4 (312-426)||(1190196-1190310)
chr4 (176-246)||(52240089-52240159)
chr4 (314-398)||(54484338-54484423)
chr4 (343-411)||(669680-669748)
chr4 (359-427)||(4714016-4714084)
chr4 (257-288)||(2311088-2311119)
chr4 (250-288)||(19750237-19750275)
chr4 (250-288)||(19789531-19789569)
chr4 (250-307)||(56085465-56085520)
chr4 (375-411)||(3934309-3934345)
[»] scaffold0201 (1 HSPs)
scaffold0201 (314-427)||(21124-21237)
[»] chr6 (26 HSPs)
chr6 (253-427)||(23397301-23397473)
chr6 (250-428)||(5187564-5187742)
chr6 (315-427)||(15730036-15730149)
chr6 (250-431)||(23392207-23392388)
chr6 (249-410)||(7311666-7311826)
chr6 (296-428)||(17839127-17839259)
chr6 (250-428)||(29381672-29381850)
chr6 (250-435)||(17837605-17837790)
chr6 (296-426)||(232174-232303)
chr6 (296-432)||(5186560-5186696)
chr6 (255-426)||(29380189-29380358)
chr6 (249-427)||(18346691-18346869)
chr6 (313-427)||(6452516-6452630)
chr6 (314-426)||(6701378-6701490)
chr6 (328-427)||(34023883-34023982)
chr6 (296-426)||(6702859-6702988)
chr6 (299-404)||(34024055-34024160)
chr6 (250-428)||(32506969-32507146)
chr6 (312-411)||(2687243-2687342)
chr6 (313-428)||(2687929-2688044)
chr6 (255-425)||(7310275-7310443)
chr6 (313-427)||(6452281-6452395)
chr6 (359-427)||(233615-233683)
chr6 (250-338)||(12669809-12669896)
chr6 (356-398)||(27082192-27082234)
chr6 (271-423)||(29722664-29722814)
[»] scaffold0118 (2 HSPs)
scaffold0118 (250-411)||(43516-43678)
scaffold0118 (325-388)||(42443-42506)
[»] scaffold0034 (2 HSPs)
scaffold0034 (250-401)||(108536-108687)
scaffold0034 (263-428)||(109702-109865)
[»] scaffold0019 (1 HSPs)
scaffold0019 (249-432)||(63073-63255)
[»] scaffold1251 (1 HSPs)
scaffold1251 (372-430)||(1149-1207)
[»] scaffold0011 (1 HSPs)
scaffold0011 (250-429)||(127428-127606)
[»] scaffold0472 (1 HSPs)
scaffold0472 (294-339)||(731-776)


Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 175 - 474
Target Start/End: Complemental strand, 41079005 - 41078704
Alignment:
Q  175 ggttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagattatggtggaccacttttaagattgg 274  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41079005 ggttaagtgttgttgactcaccggaagatacaatagacatgcatgatctaacaatcatcttttaataaaaaagattatggtggaccatttttaagattgg 41078906  T
Q  275 tccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgg 374  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||||    
T  41078905 tccaccatatacatcatttgggttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggatcaaaagatactttttatcaattgtgg 41078806  T
Q  375 gaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa--aaaatactagaataactattgatagaaagatcgaattttgtca 472  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  41078805 gaccaaaatgaaaaatggaaattaattgagggaccagcggatctaataagcctaaaaaaaatactagaataactatttatagaaagatcgaattttgtca 41078706  T
Q  473 aa 474  Q
    ||    
T  41078705 aa 41078704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 502 - 623
Target Start/End: Complemental strand, 41077720 - 41077599
Alignment:
Q  502 tggttaaactattgatcaagtctaaagttaatggtttaactttttctaacgattactatctatgtagctttcaaccactcagattcttatgatggtttta 601  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41077720 tggttaaactattgatcaagtctaaagttaatggtttaattttttctaacgattactatctatgtagctttcaaccactcagattcttatgatggtttta 41077621  T
Q  602 catcctagttgattaccatttt 623  Q
    |||| |||||||||||||||||    
T  41077620 catcttagttgattaccatttt 41077599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 250 - 426
Target Start/End: Complemental strand, 32255164 - 32254987
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||  | |||||     
T  32255164 tatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcgggatttatttggcaaacggaggaaaaagtgagggat 32255065  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    ||||| |||| |||||| |||| |||||||||||| |||| | ||||||| ||||||||||||  ||| |||||||||    
T  32255064 caaaatgtacgttttattaattatgggaccaaaataaaaatttgaaattatttgagggaccaaatgatttaataagcc 32254987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 255 - 428
Target Start/End: Original strand, 41079784 - 41079954
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||||||||  ||| ||||||||||| ||  || | |||||||||||| || ||||||||||  |||||||||||||||  |||||||||||||     
T  41079784 tggaccacttttaatgttgttccaccatagatat--ttggagttaaagttaacggtagggatttatttagcaaacggaggaaaagataagggaccaaaac 41079881  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||| |||||| | ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||    
T  41079882 gtacgttttatta-ttgtgggaccaaaataaaaaatggaaattaattgagggaccaatggatataataaaccta 41079954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 255 - 426
Target Start/End: Original strand, 32256344 - 32256513
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||||||||  ||||||||||||||||||  ||   |||||||||||| || || ||||||| |||||| |||||||||  | ||||||||||||    
T  32256344 tggaccacttttaatgttggtccaccatagacat--ttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaaag 32256441  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||| |||||| |||| ||||||||||||||||| | ||||||| |||||||||||  ||||| ||||||||    
T  32256442 gtacattttattaattatgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagcc 32256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 43460765 - 43460903
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| |||||| ||||| ||  ||||||||| |||||| |||||||||  | ||||||     
T  43460765 tatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactgtgaggatttatttggcaaatggaggaaaaagtgagggact 43460864  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||| |||| |||||| ||||||||||||||||||||||    
T  43460865 aaaatgtacgttttattaattgtgggaccaaaatgaaaa 43460903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 255 - 431
Target Start/End: Complemental strand, 47454504 - 47454330
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||| ||||| |||||| |||||||||||  || | |||||||||||  ||||||||||||| |||||||| || ||||  | |||||||||||     
T  47454504 tggaccactcttaaggttggtctaccatagacat--ttagagttaaagttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaat 47454407  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
    |||| |||||| |||||||||||||||||||||  | ||||||| |||||||||||  ||||| |||||||| ||||    
T  47454406 gtacgttttattaattgtgggaccaaaatgaaagcttgaaattatttgagggaccactggatcaaataagccaaaaa 47454330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 13564181 - 13564358
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| |||||  || |||||||||||||| ||||||| ||||| ||||| ||||||||||||| ||||||||||||||||| | ||||||    
T  13564181 tatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gtcgggatttatttggcaaacggaggaaaatgtgagggac 13564279  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
     |||| |    |||||| ||||||||||||||||||||||   |||||||| | |||||| ||  ||||||||||||||    
T  13564280 taaaacgccagttttattaattgtgggaccaaaatgaaaacaagaaattaaataagggactaaatgatctaataagcct 13564358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 314 - 432
Target Start/End: Original strand, 35664287 - 35664405
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    ||||| || |||||||||||  ||| |||||||||||||||||| ||||||| | || ||||| |||||||||||||||||||||||| ||||| ||| |    
T  35664287 gatttttttggcaaacggagataaaactaagggaccaaaaggtattttttattacttatgggatcaaaatgaaaaatggaaattaattaagggatcaatg 35664386  T
Q  414 gatctaataagcctaaaaa 432  Q
    |||||||||||||||||||    
T  35664387 gatctaataagcctaaaaa 35664405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 250 - 426
Target Start/End: Complemental strand, 22336153 - 22335977
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||||||| ||||| |||||  |||||||||||| ||||||| ||||||||  | ||||||    
T  22336153 tatggtggaccacttttaaggttgatccaccatag-catcatttggggttaaacttaacattcgggatttatttggcaaactgaggaaaaggtgagggac 22336055  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||    
T  22336054 taaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaaaagatctaataagcc 22335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 299 - 427
Target Start/End: Original strand, 47456366 - 47456494
Alignment:
Q  299 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    ||||||||| |||| |||||||| ||||||| || |||||  | ||||||||||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  47456366 aaagttaacagtcgagatttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 47456465  T
Q  399 attgagggaccaacggatctaataagcct 427  Q
     |||||||||||  ||||| |||||||||    
T  47456466 tttgagggaccattggatcaaataagcct 47456494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 258 - 424
Target Start/End: Complemental strand, 11501344 - 11501180
Alignment:
Q  258 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 357  Q
    |||||||||||| ||||||||||||||||||  ||   |||||||||||| ||||||||||||| |||||| |||||||||  | |||||| |||| |      
T  11501344 accacttttaaggttggtccaccatagacat--ttgaagttaaagttaacagtcgggatttatttggcaaatggaggaaaaggtgagggactaaaatgct 11501247  T
Q  358 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataag 424  Q
     ||||||| || |||||||||||||||||||   |||||||||| | |||||||  |||||||||||    
T  11501246 atttttattaactgtgggaccaaaatgaaaacatgaaattaattaaaggaccaaacgatctaataag 11501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 296 - 426
Target Start/End: Original strand, 22538836 - 22538966
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    ||||||||||||||||| |||||||| ||||||||||||||||  | |||||| |||| ||  ||||||| |||||||||||||||| |||||   ||||    
T  22538836 gttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaacatgaaa 22538935  T
Q  396 ttaattgagggaccaacggatctaataagcc 426  Q
    |||| | |||||||||  |||||||||||||    
T  22538936 ttaaataagggaccaaacgatctaataagcc 22538966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 40811494 - 40811405
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaat 339  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||  | | ||||||||||||    
T  40811494 tatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcaggatttatttagtatacggaggaaaat 40811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 40811601 - 40811528
Alignment:
Q  176 gttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  40811601 gttaagtgttgttgactcacaggaagatacaatagacattcatgatctaacaattatcttttaataaaaaagat 40811528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 314 - 425
Target Start/End: Original strand, 45455378 - 45455489
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||| ||||  | ||||| ||||| |||| |||||| |||||||||||||||||||||| | |||||||||| |||||||| ||    
T  45455378 gatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttgaaattaattaagggaccatcg 45455477  T
Q  414 gatctaataagc 425  Q
    |||| |||||||    
T  45455478 gatcaaataagc 45455489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 47059238 - 47059099
Alignment:
Q  294 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 393  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||||||  | ||||| ||||| |||| |||||| |||||| ||||||||||||||| |  |    
T  47059238 gggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtacattttattaattgtaggaccaaaatgaaaacttaa 47059139  T
Q  394 aattaattgagggaccaacggatctaataagcctaaaaaa 433  Q
    ||||||||  |||||||  | |||||||||||| ||||||    
T  47059138 aattaattaggggaccattgaatctaataagcccaaaaaa 47059099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 430
Target Start/End: Complemental strand, 33096980 - 33096863
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| ||||||||||||||||  | |||||||||||||||  |||||| ||||||||| | ||||||| || | ||||||| |||||||||||      
T  33096980 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccatt 33096881  T
Q  413 ggatctaataagcctaaa 430  Q
    ||||| ||||||||||||    
T  33096880 ggatcaaataagcctaaa 33096863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 313 - 428
Target Start/End: Original strand, 6173455 - 6173570
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||| ||||  ||||||||||| | ||||||| |||||||||||      
T  6173455 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggaccatt 6173554  T
Q  413 ggatctaataagccta 428  Q
    ||||| ||||||||||    
T  6173555 ggatcaaataagccta 6173570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 11502363 - 11502541
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| |||||| ||||||||||| ||||| ||||||| ||||| || |||||||||| ||||||| ||| ||||  | ||||||    
T  11502363 tatggtggaccactcttaaggttggtctaccatagacatcatttgaggttaaacttaactgttgggatttatttggcaaacagagcaaaagttgagggac 11502462  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
     ||   | | ||||||| || ||||||| |||||||||||   ||||||| || | |||||||  ||||||||||||||    
T  11502463 taattcgcaatttttattaaatgtgggatcaaaatgaaaacatgaaattagttaaaggaccaaacgatctaataagcct 11502541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 426
Target Start/End: Complemental strand, 43459619 - 43459453
Alignment:
Q  258 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 357  Q
    |||| ||||||| ||| ||||||||||||||  || | |||||| ||||| | || |||||||| ||||||||||||||||  | ||||||  ||| | |    
T  43459619 accatttttaaggttgatccaccatagacat--ttggagttaaacttaacagccgagatttatttggcaaacggaggaaaacatgagggacttaaacgca 43459522  T
Q  358 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    | |||||| |||||||||||||||||||||| | ||||||| ||  ||||| || ||||| ||||||||    
T  43459521 cgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggactaatggatcaaataagcc 43459453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 430
Target Start/End: Complemental strand, 32603043 - 32602927
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||| ||||  | |||||| |||| |||| |||||| |||| |||||||||||| |||| | ||||||| |||| ||||||| |    
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaatg 32602944  T
Q  414 gatctaataagcctaaa 430  Q
    |||| ||||||||||||    
T  32602943 gatcaaataagcctaaa 32602927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 314 - 433
Target Start/End: Complemental strand, 30333395 - 30333276
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| | ||||||||| ||||  | |||||||||||| ||| |||||| |||||||||||||||||||||| | ||||||| ||  |||||||| |    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatg 30333296  T
Q  414 gatctaataagcctaaaaaa 433  Q
     ||||| ||||| |||||||    
T  30333295 aatctattaagcttaaaaaa 30333276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 255 - 426
Target Start/End: Original strand, 40812562 - 40812731
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 353  Q
    |||| |||||||||| |||||||||||| |   | |||||| |||||||| ||| |||||||| |||| | ||||| ||||||||| | ||||| |||||    
T  40812562 tggatcacttttaaggttggtccaccatgg---ttatttggagttaaagtaaacagtcgggatatatttgacaaacagaggaaaatatgagggagcaaaa 40812658  T
Q  354 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
     |||| |||||| |||| ||| |||||||||||||   |||||||| | ||||| |||  |||||||||||||    
T  40812659 cgtacgttttattaattatggaaccaaaatgaaaacatgaaattaaataagggatcaaacgatctaataagcc 40812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 41075337 - 41075383
Alignment:
Q  19 aataatgtactactacatcacacactccctagtccccacctattaat 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41075337 aataatgtactactacatcacacactccctagtccccacctattaat 41075383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 427
Target Start/End: Original strand, 22337329 - 22337489
Alignment:
Q  264 tttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtacttttt 363  Q
    |||||| ||||||||||||||||||  ||   |||||| ||||| ||| ||||||||| ||||||||||||||||| ||||||||  || |  | |||||    
T  22337329 tttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcaggatttatttggcaaacggaggaaaatgtaagggactgaatgcca-ttttt 22337425  T
Q  364 atcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    || |||||||||| |||||||||||   |||| ||| | |||||||||   |||||||||||||    
T  22337426 attaattgtgggatcaaaatgaaaacatgaaactaaataagggaccaaacaatctaataagcct 22337489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 428
Target Start/End: Complemental strand, 30310270 - 30310117
Alignment:
Q  274 gtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgt 372  Q
    |||||||||||||||  || |||||||  ||||| ||| |||||||||| ||||||||||||||||  | ||| ||  ||| |||| |||||| ||||||    
T  30310270 gtccaccatagacat--ttggggttaactttaacagtctgggatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgt 30310173  T
Q  373 gggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    ||||| |||||||||| | ||||||| || |||||| |  ||||| ||||||||||    
T  30310172 gggacaaaaatgaaaacttgaaattatttaagggactattggatcaaataagccta 30310117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 30334672 - 30334755
Alignment:
Q  343 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| | ||||||| ||  |||||||| ||||||| ||||||    
T  30334672 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattagttaggggaccaatggatctattaagcc 30334755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 425
Target Start/End: Complemental strand, 40508551 - 40508377
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||| ||| ||||||||| ||||||||||||||  || || ||||| ||||| |    ||||||||| ||| ||||||||||||  | ||||||    
T  40508551 tatggtggacaactcttaagattgatccaccatagacat--ttgggattaaacttaacaccgaaggatttatttggctaacggaggaaaaagtgagggac 40508454  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 425  Q
      ||| |||| |||||| ||||||||||| |||||||||| | ||||||| ||  |||||||  ||||| |||||||    
T  40508453 ttaaacgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaggggaccattggatcaaataagc 40508377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 250 - 401
Target Start/End: Original strand, 47060419 - 47060568
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||| | | ||||| ||||||||||||| ||||  || | |||||| ||||| ||| ||||||||| ||||||||||  |||   | |||||||    
T  47060419 tatggtggactattcttaaggttggtccaccatatacat--ttggtgttaaacttaacagtccggatttatttggcaaacggaaaaaagggtgagggacc 47060516  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    |||| |||| |||||| |||| | ||||||||||||||| |  |||||||||    
T  47060517 aaaacgtacgttttattaattataggaccaaaatgaaaacttaaaattaatt 47060568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 428
Target Start/End: Complemental strand, 13562986 - 13562818
Alignment:
Q  258 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 357  Q
    |||||||||||| ||||||||  ||||||||  ||   ||||||||||||  |||||||||||| || |||| ||| ||||| | |||||| |||| |      
T  13562986 accacttttaaggttggtccattatagacat--ttgaagttaaagttaacaatcgggatttatttggtaaacagagaaaaatgtgagggactaaaacgcc 13562889  T
Q  358 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
     ||||||| | ||||||||||||||| ||||   |||||||| | |||||| ||  |||||||||||||||    
T  13562888 atttttattacttgtgggaccaaaataaaaacaagaaattaaataagggactaaacgatctaataagccta 13562818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 250 - 431
Target Start/End: Complemental strand, 22537733 - 22537552
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||| |||| ||||| ||||| |||| || |||| ||||| ||||||| ||||| || || ||||||| ||||||| |||  |||  | |||||     
T  22537733 tatggtggatcactattaaggttggttcaccgtaaacatcatttgaggttaaaattaacagttgg-atttatttggcaaacagagacaaacgtgagggat 22537635  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
    ||||| ||  ||||||  ||||||||||||||||||||||    ||||||| | ||||| |||  ||||||||||||||||||    
T  22537634 caaaatgtcatttttagtaattgtgggaccaaaatgaaaatataaaattaaataagggagcaaacgatctaataagcctaaaa 22537552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 250 - 398
Target Start/End: Original strand, 40509677 - 40509824
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||||||||| ||||||||  || |||||||| ||||| |     |||||||| || |||||||||||||  | ||| ||    
T  40509677 tatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacaccgaatgatttatttggtaaacggaggaaaaagtgaggaac 40509774  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
      ||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  40509775 ttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 40509824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 45454285 - 45454216
Alignment:
Q  179 aagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    |||||||||||||||| ||||||||||| |||| |||||| ||||||| ||| ||||||||| ||||||||    
T  45454285 aagtgttgttgactca-tggaagatacagtagatatgcataatctaacgatcctcttttaattaaaaagat 45454216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 398
Target Start/End: Original strand, 4300054 - 4300138
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    |||||||| ||||||| ||||||||  | ||||||  ||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  4300054 gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 4300138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 398
Target Start/End: Original strand, 22115107 - 22115254
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||||||||| ||||||||  || |||||||| ||||| |     |||||||| ||  ||||||||||||  | ||| ||    
T  22115107 tatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacaccgaangatttatttggtnaacggaggaaaaagtgaggaac 22115204  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
      ||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  22115205 ttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 22115254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 504
Target Start/End: Complemental strand, 41078691 - 41078655
Alignment:
Q  468 tgtcaaattatataagaaagttataggtgatgagtgg 504  Q
    |||||||||||||||||||||||||||||||||||||    
T  41078691 tgtcaaattatataagaaagttataggtgatgagtgg 41078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 669231 - 669298
Alignment:
Q  182 tgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||| ||| || |||||||| || ||||||||||||||||| | |||||||| ||||||||||    
T  669231 tgttgttgattcattgtaagatacaataaacatgcatgatctaacagttatcttttattaaaaaagat 669298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 43441520 - 43441460
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc 311  Q
    ||||||||||||||| ||||| ||||| ||||||||||||  || ||||||||||||||||||    
T  43441520 ttatggtggaccactcttaaggttggtacaccatagacat--ttagggttaaagttaaccgtc 43441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 434
Target Start/End: Complemental strand, 3413705 - 3413522
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||| ||| ||||||||| ||||||||||||||   |   |||||| ||||| ||  |||||||||| ||||||| ||| ||||  | ||||||    
T  3413705 tatggtggacaactcttaagattgatccaccatagacatc--tgaagttaaacttaacagttagggatttatttggcaaacagagtaaaaggtgagggac 3413608  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaat 434  Q
     |||| |   ||||||| |||||| |||||||||||||||   ||||||| ||   |||||||  ||||||||||||| |||||||    
T  3413607 taaaacgccatttttattaattgtaggaccaaaatgaaaacacgaaattatttagaggaccaaacgatctaataagccaaaaaaat 3413522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 40811394 - 40811332
Alignment:
Q  370 tgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 432  Q
    ||||||||||||||||||| | ||||||| |||||||||||  ||||| ||||||||| ||||    
T  40811394 tgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagccttaaaa 40811332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 45454149 - 45454052
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    ||||||||| ||||||||||||||||  | |||||| |||| |||  |||||| |||| || ||||||||||||||   ||||||||||  |||||||    
T  45454149 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggacca 45454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 30311521 - 30311596
Alignment:
Q  360 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaata 435  Q
    |||||| |||||||||||||||||||||| | ||||||| ||  ||||| || ||||| |||||||| | ||||||    
T  30311521 ttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaatggatcaaataagccaataaaata 30311596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 2414918 - 2414863
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 307  Q
    |||||||||||||||||||| ||||||||  ||||||||  || ||||||||||||||    
T  2414918 tatggtggaccacttttaaggttggtccattatagacat--ttggggttaaagttaac 2414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 33779136 - 33779204
Alignment:
Q  360 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||||| ||||||||| |||||||||||| | ||||||| ||  ||||| || ||||| ||||||||||    
T  33779136 ttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataagccta 33779204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 257 - 427
Target Start/End: Original strand, 2426 - 2594
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||||||||||||  ||||| || | |||||||||||| ||||| ||||||| || |||| |||||||| |||||||||||||||||    
T  2426 gaccacttttaaggttggtccaccatt-acatatttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaactaagggaccaaaaggt 2524  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  2525 actttttattaattgtgggaccaaaatg-aaaatggaaattaattgagggaccaattgatctaataagcct 2594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 9e-47; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 257 - 431
Target Start/End: Complemental strand, 53622830 - 53622655
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaagg 355  Q
    ||||||| ||||| |||||||||||||||||| ||||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||| |||||      
T  53622830 gaccactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaata 53622731  T
Q  356 tactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
    || ||||||| ||||||| |||||||||||| |||| |||||||| ||||||| || |||||||||||||||||||    
T  53622730 tattttttattaattgtgcgaccaaaatgaataatgaaaattaatcgagggacgaatggatctaataagcctaaaa 53622655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 38242457 - 38242643
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||| |||||| ||||| ||  ||||||||| ||||||| ||  ||||  | ||||||    
T  38242457 ttatggtggaccactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggac 38242556  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaata 435  Q
    |||||||||| |||||| |||||||||| ||||||||||| | ||||||| ||||||||||   | ||| |||||||||||| ||||    
T  38242557 caaaaggtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggacctttgaatcaaataagcctaaataata 38242643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 427
Target Start/End: Complemental strand, 3208659 - 3208481
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||||||||| ||||| ||||||||||||| | || ||||||| ||||| ||||| ||  ||||||||| | ||||||||||||||  |||||||    
T  3208659 ttatggtggaccactcttaaggttggtccaccata-atatcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataaggga 3208561  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
     ||||| |||| |||||| |||| ||||||||||||||||||||||||||||||   ||||||| ||||  |||||||||    
T  3208560 tcaaaacgtacgttttattaattatgggaccaaaatgaaaaatggaaattaattagaggaccaatggattaaataagcct 3208481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 296 - 429
Target Start/End: Complemental strand, 18197275 - 18197142
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||  | |||||||||||||||| |||||| |||||||||||||||||||||| | ||||    
T  18197275 gttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaa 18197176  T
Q  396 ttaattgagggaccaacggatctaataagcctaa 429  Q
    ||| |||||||||    ||||| |||||||||||    
T  18197175 ttatttgagggacatttggatcaaataagcctaa 18197142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 250 - 426
Target Start/End: Original strand, 10732071 - 10732247
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    ||||||||||| || | ||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||| || |||||||||||||| | ||||||     
T  10732071 tatggtggaccgctctaaaggttggtccaccatagacatcatttgggttaaacttaaccgtcggaatttatttggtaaacggaggaaaatgtgagggact 10732170  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||| |   ||||||| |||| |||||||||||||||||    ||||||| | ||||| |||  |||||||||||||    
T  10732171 aaaacgccatttttattaattatgggaccaaaatgaaaacaataaattaaataagggatcaaacgatctaataagcc 10732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 428
Target Start/End: Complemental strand, 40244353 - 40244183
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||||||||| |||||||||||||||||   ||   |||||||||||| |||   ||| ||| ||||||||||||||||| | |||||||||||     
T  40244353 tggaccacttttaagtttggtccaccatagacac--ttgaagttaaagttaactgtcaaaatt-atttggcaaacggaggaaaatttgagggaccaaaat 40244257  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||| |||||| ||||||| |||||||||||||| | ||||||| || ||||||||| ||||| ||||||||||    
T  40244256 gtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttaagggaccaatggatcaaataagccta 40244183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 255 - 427
Target Start/End: Complemental strand, 38241072 - 38240903
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||| ||||||| ||||| ||||||||||||  || | |||||| ||||| | ||||||||||| ||||||||||||||||||| | ||||  |||     
T  38241072 tggaccatttttaag-ttggttcaccatagacat--ttggagttaaacttaacagccgggatttatttggcaaacggaggaaaatctgaaggacttaaac 38240976  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||| |||||| ||||||||||||||||| |||| | ||||||| |  ||||||||| ||||| |||||||||    
T  38240975 gtacgttttattaattgtgggaccaaaataaaaatttgaaattattcaagggaccaatggatcaaataagcct 38240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 255 - 438
Target Start/End: Complemental strand, 27838086 - 27837906
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    |||||||||||||| ||||||| |||||||||||   |||   | |||||||| ||| ||||||||| ||||||||||||||||  | |||||| ||||     
T  27838086 tggaccacttttaaaattggtctaccatagacat---ttgaagttaagttaacagtcaggatttatttggcaaacggaggaaaaggtgagggactaaaac 27837990  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaatacta 438  Q
    |   | ||||| ||||||||||||||||||||||   |||||||| | ||||| |||  |||||||||| |||| |||||||||    
T  27837989 gccatatttattaattgtgggaccaaaatgaaaacatgaaattaaataagggatcaaacgatctaataaacctagaaaatacta 27837906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 296 - 401
Target Start/End: Complemental strand, 34818214 - 34818109
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    ||||||||||||  | |||||||||| |||||| |||||||||||| ||||||||||   ||| |||||| |||||||||||||||||||||| | ||||    
T  34818214 gttaaagttaactattgggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaatgaaaacttgaaa 34818115  T
Q  396 ttaatt 401  Q
    ||||||    
T  34818114 ttaatt 34818109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 53624326 - 53624480
Alignment:
Q  271 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 370  Q
    ||||||||||||| ||||  || ||||||||  |||||||| ||||||||| ||||||| ||| ||||  | || |||||||| |||| |||||| ||||    
T  53624326 ttggtccaccatatacat--ttggggttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaatt 53624423  T
Q  371 gtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    ||| || ||||||||||| | ||||||| |||||||||||  ||||| |||||||||    
T  53624424 gtgagatcaaaatgaaaacttgaaattatttgagggaccattggatcaaataagcct 53624480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 257 - 431
Target Start/End: Complemental strand, 10731050 - 10730878
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||||| ||||||||||||  ||   |||||||||||| ||||||||||||| ||||||||||| ||||  | | ||||||||| |     
T  10731050 gaccacttttaaggttggttcaccatagacat--ttgaagttaaagttaacagtcgggatttatttggcaaacggagaaaaaagtgaaggaccaaaatgc 10730953  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
      ||||||| |||| |||||||||||||||||   |||||| | | ||||| |||  |||| |||||||||||||    
T  10730952 catttttattaattatgggaccaaaatgaaaacaagaaattgaataagggatcaaacgatccaataagcctaaaa 10730878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 314 - 428
Target Start/End: Original strand, 50810840 - 50810954
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  50810840 gatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 50810939  T
Q  414 gatctaataagccta 428  Q
    |||||| ||||||||    
T  50810940 gatctattaagccta 50810954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 314 - 428
Target Start/End: Complemental strand, 50865024 - 50864910
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  50865024 gatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 50864925  T
Q  414 gatctaataagccta 428  Q
    |||||| ||||||||    
T  50864924 gatctattaagccta 50864910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 53614215 - 53614392
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| |||||  || |||||||||||||| ||||||| ||||| ||||| | | ||||||||| ||||||  ||||||||| | ||||||    
T  53614215 tatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gcctggatttatttggcaaatagaggaaaatgtgagggac 53614313  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
     |||| |    |||||| ||||||||||||||||| ||||   |||||||| | |||||||||  ||||||||||||||    
T  53614314 taaaacgccagttttattaattgtgggaccaaaataaaaacaagaaattaaataagggaccaaacgatctaataagcct 53614392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 408
Target Start/End: Original strand, 12107921 - 12108083
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattc---ggcaaacggaggaaaatctaagg 345  Q
    |||||||||||||||||||| ||||||||||||| | || ||||||| ||||| |||||   || ||||||||    ||||||||||||||||  | |||    
T  12107921 tatggtggaccacttttaaggttggtccaccataaatatcatttggggttaaatttaacacccgtgatttattatttggcaaacggaggaaaaagtgagg 12108020  T
Q  346 gaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggac 408  Q
    ||||||||  ||  |||||| | |||||||||||||||||||| | ||||||| || ||||||    
T  12108021 gaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggac 12108083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 314 - 429
Target Start/End: Complemental strand, 50809531 - 50809416
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || |||||||||      
T  50809531 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaata 50809432  T
Q  414 gatctaataagcctaa 429  Q
    |||||| |||||||||    
T  50809431 gatctattaagcctaa 50809416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 314 - 429
Target Start/End: Original strand, 50866331 - 50866446
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || |||||||||      
T  50866331 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaata 50866430  T
Q  414 gatctaataagcctaa 429  Q
    |||||| |||||||||    
T  50866431 gatctattaagcctaa 50866446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 26887506 - 26887676
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||||| ||||||||| ||  ||   |||||||||||||||| | ||||||| || |||| ||||||||  | |||||| |||  |     
T  26887506 gaccacttttaaggttggtacaccatagatat--ttgaagttaaagttaaccgtcagaatttatttgggaaacagaggaaaagatgagggactaaattgc 26887603  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 429  Q
      ||||||| ||||||||||| ||||||||||   |||||||| | |||||||||  ||||||||||||||||    
T  26887604 catttttattaattgtgggacaaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctaa 26887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 381
Target Start/End: Original strand, 27841652 - 27841783
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||| | ||||| |||||| |||| ||||||| | |||||| | |||||  | | ||||     
T  27841652 tatggtggaccactcttaaggttggtccaccataaacataatttagattaaacttaaccatcggaatttatttgacaaacgaaagaaaaggtgaaggact 27841751  T
Q  350 aaaaggtactttttatcaattgtgggaccaaa 381  Q
    |||| |   ||||||| |||||||||||||||    
T  27841752 aaaaagctatttttattaattgtgggaccaaa 27841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 428
Target Start/End: Complemental strand, 35371081 - 35370909
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||| |||| |||||||||      |||| | ||||| ||||||||  | | ||||     
T  35371081 tatggtggaccactcttaaggttggtccaccataaacatcatttgggctaaacttaaccgtc------tatttgacaaacagaggaaaaggtgaaggact 35370988  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    ||||     ||||||| |||||||||| |||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  35370987 aaaacaccatttttattaattgtgggatcaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccta 35370909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 257 - 434
Target Start/End: Complemental strand, 41263803 - 41263628
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||| ||||||||||| ||  || | ||||||||||||  | |||||||| | | ||||||||| ||||  | | ||||||||| |     
T  41263803 gaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttgggatttaattgacaaacggagaaaaagatgacggaccaaaatgc 41263706  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaat 434  Q
      ||||||  || |||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||| |||||    
T  41263705 catttttaataaatgtgggaccaaaatgaaaatatgaaattaaataagggaccaaacgatctaataagcctataaaat 41263628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 36176374 - 36176445
Alignment:
Q  177 ttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    |||||||||||||||||| ||||||||||  ||| ||||||| ||||||| |||||| |||||||||||||||    
T  36176374 ttaagtgttgttgactca-tggaagatacggtaggcatgcataatctaacgatcatcctttaataaaaaagat 36176445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 296 - 388
Target Start/End: Complemental strand, 53612999 - 53612907
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||| | |||||  |||| |   ||||||| |||| |||||||||||||||||    
T  53612999 gttaaagttaacggtcgggatttatttggcaaacagaggaaaatgtgagggaataaaacgccatttttattaattatgggaccaaaatgaaaa 53612907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 53194837 - 53194960
Alignment:
Q  274 gtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgt 372  Q
    |||||||||||||||  |||| |||||| ||||| | |  ||||||||| ||||||  ||||||||  | ||||||||||| |||| |||||| |||| |    
T  53194837 gtccaccatagacat--tttgagttaaacttaacagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattat 53194934  T
Q  373 gggaccaaaatgaaaaatggaaatta 398  Q
    |||||||||||||||| | |||||||    
T  53194935 gggaccaaaatgaaaacttgaaatta 53194960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 53420490 - 53420352
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||| |||||||||  ||||||||||||||||||  ||  ||||||| ||||  | |  |||||||||| |  |||||||| ||||  | |||||    
T  53420490 tatggtggatcacttttaaagttggtccaccatagacat--ttgtggttaaacttaatagactagggatttatttgataaacggagaaaaaagtgaggga 53420393  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||||| |||| |||||| |||||| |||||||||||||||    
T  53420392 ccaaaacgtacgttttattaattgtaggaccaaaatgaaaa 53420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 417
Target Start/End: Original strand, 38247480 - 38247585
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||||| || ||||||||| |  ||| |||||| ||||||| |||| |||||| | || |  |||||||||||||| |||||||||||| |||||||||    
T  38247480 gggatttttttggcaaacggtgtgaaaactaaggaaccaaaatgtacgttttattacttatatgaccaaaatgaaaattggaaattaattaagggaccaa 38247579  T
Q  412 cggatc 417  Q
     |||||    
T  38247580 tggatc 38247585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 388
Target Start/End: Original strand, 35372108 - 35372238
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    |||||||||||||| ||||||||| |||||||||   |||   | |||||||| ||  ||||||||| ||||||| ||||||||  | |||||| ||||     
T  35372108 tggaccacttttaaaattggtccaacatagacat---ttgaagttaagttaacagtaaggatttatttggcaaacagaggaaaaggtgagggactaaaac 35372204  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |   ||||||| ||||||| ||||||||||||||    
T  35372205 gccatttttattaattgtgagaccaaaatgaaaa 35372238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 297 - 388
Target Start/End: Original strand, 40745455 - 40745546
Alignment:
Q  297 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    ||||||||||| |||  ||||||||  ||||||  |||||||||| ||||| ||||| | |  |||||||||||||| ||||||||||||||    
T  40745455 ttaaagttaacggtcaagatttattttgcaaacaaaggaaaatctgagggatcaaaacgaaagttttatcaattgtgagaccaaaatgaaaa 40745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 10301882 - 10301920
Alignment:
Q  372 tgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  10301882 tgggaccaaaatgaaaaatggaaattagttgagggacca 10301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 28909466 - 28909516
Alignment:
Q  199 aagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    |||||||| |||||||||||||||||||  || ||||||||||||||||||    
T  28909466 aagatacagtagacatgcatgatctaaccgtcctcttttaataaaaaagat 28909516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 427
Target Start/End: Original strand, 36176512 - 36176626
Alignment:
Q  314 gatttattcggcaaacggaggaaaatc-taagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    |||||||| ||||||| ||||||||   | |||||||||||  ||| |||||| ||||||||||||||||||||||   |||||||||   |||||||      
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggaccatt 36176611  T
Q  413 ggatctaataagcct 427  Q
    ||||| |||||||||    
T  36176612 ggatcaaataagcct 36176626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 432
Target Start/End: Complemental strand, 37735416 - 37735298
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| | |||||| || ||||  | |||||| ||||  ||| |||||| |||| ||||||||||||||||| |  |||||| || | ||||||| |    
T  37735416 gatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaatg 37735317  T
Q  414 gatctaataagcctaaaaa 432  Q
    |||| ||||||||||||||    
T  37735316 gatcaaataagcctaaaaa 37735298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 423
Target Start/End: Original strand, 18458663 - 18458772
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||  | |||||| |||| | |  |||||| ||||||||||||||||| |||| | ||||||| ||  ||||| || |    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatg 18458762  T
Q  414 gatctaataa 423  Q
    |||| |||||    
T  18458763 gatcaaataa 18458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 425
Target Start/End: Original strand, 34819227 - 34819401
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||| ||||| |||||||| ||||||| ||||| ||||| |   ||| | ||| ||||||| ||| ||||   |||| ||    
T  34819227 tatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaacagcaaggact-atttggcaaacagagaaaaagtgaagg-ac 34819324  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 425  Q
      ||| |||| |||||| |||||| ||| ||||||||||| | ||||||| ||||||||| || ||||| |||||||    
T  34819325 ttaaacgtacgttttattaattgtaggatcaaaatgaaaacttgaaattatttgagggactaatggatcaaataagc 34819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 37736089 - 37736161
Alignment:
Q  316 tttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||||| ||||||||||| ||||  | |||||| |||| |||| |||||| ||||||| ||||||||||||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaa 37736161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 426
Target Start/End: Original strand, 41264595 - 41264771
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    ||||||| |||||| ||||   || ||||||||| |||| ||||   ||||| ||||| || | |||||||| ||||||||||| ||||  | ||||| |    
T  41264595 tatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgagatttatttggcaaacggagaaaaaggtgagggatc 41264694  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||| |   ||||||| || |||| ||||||||||||||   |||||||| | |||||||||   ||||||||||||    
T  41264695 aaaacgccatttttattaaatgtgagaccaaaatgaaaacatgaaattaaataagggaccaaacaatctaataagcc 41264771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 388
Target Start/End: Original strand, 53421765 - 53421841
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||||||||| ||||||| ||| ||||  | ||||||||||| |||| |||||| |||||| |||| ||||||||||    
T  53421765 gggatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaa 53421841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 410
Target Start/End: Original strand, 10340036 - 10340071
Alignment:
Q  375 gaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||||||||||||||||||||||| |||||||||||    
T  10340036 gaccaaaatgaaaaatggaaattagttgagggacca 10340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 429
Target Start/End: Original strand, 23443463 - 23443578
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||| || |||||  | | ||||  |||||||| |||||| |||| ||||||||||||||||| |  ||||||||| ||||| ||  |    
T  23443463 gatttatttggcaaacagaagaaaagatgaaggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaagggatcattg 23443562  T
Q  414 gatctaataagcctaa 429  Q
    |||| ||||| |||||    
T  23443563 gatcaaataaacctaa 23443578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 41544773 - 41544663
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| ||||||| ||||||||  | ||||||  ||| |||| || ||| |||| | ||||||||||||||| | ||||||| || | |||||||     
T  41544773 ggatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggaccaat 41544674  T
Q  413 ggatctaataa 423  Q
    | |||||||||    
T  41544673 gaatctaataa 41544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 398
Target Start/End: Complemental strand, 40364430 - 40364345
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    ||||||||| ||||||||||| ||||  | ||||||  ||| |||| |||||| |||| | ||||||||||||||| | |||||||    
T  40364430 ggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaattttaggaccaaaatgaaaacttgaaatta 40364345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 3209983 - 3210051
Alignment:
Q  360 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||||| |||||||||||||||||||||| |  |||||| || ||||||||  | ||| ||||||||||    
T  3209983 ttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggaccattgaatcaaataagccta 3210051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 93; Significance: 6e-45; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 250 - 425
Target Start/End: Original strand, 125174 - 125350
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||||||||| |||||||| |||| |||| ||||||| ||||| ||||||||  ||||||||| ||||||||||||||||  | ||||||    
T  125174 tatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgttaggatttatttggcaaacggaggaaaaagtgagggac 125273  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 425  Q
    |||||||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||  ||||| |||||||    
T  125274 caaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagc 125350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 250 - 433
Target Start/End: Complemental strand, 124141 - 123960
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||| ||||| ||||||||||||||| ||  || |||||||| ||||||||  ||||||||| ||||||| ||||||||  | |||||||    
T  124141 tatggtggaccactcttaaggttggtccaccatagatat--ttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggacc 124044  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 433  Q
    |||| |||| |||||| |||||||||||||||||||||| | ||||||| |||| ||||||  ||||| |||||||| ||||||    
T  124043 aaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgaaggaccattggatcaaataagccaaaaaaa 123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 250 - 430
Target Start/End: Original strand, 54126 - 54307
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| ||| | ||||| |||  |||||||| ||||||||||||||||| | ||||||    
T  54126 tatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaacagtcacgatttatttggcaaacggaggaaaatttgagggac 54225  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
    ||||| | || |||||| ||||||| ||||||||| |||| | ||||||| |||||||||||| ||||| ||||||||||||    
T  54226 caaaacgcacgttttattaattgtgcgaccaaaattaaaacttgaaattatttgagggaccaatggatcaaataagcctaaa 54307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 257 - 401
Target Start/End: Complemental strand, 52757 - 52615
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||| ||||||| ||||||||||||| ||||  ||   |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||| ||    
T  52757 gaccatttttaaggttggtccaccatatacat--ttaaagttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaacgt 52660  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    || |||||| |||||||||| ||||||||||| | ||||||||||    
T  52659 acattttattaattgtgggatcaaaatgaaaacttgaaattaatt 52615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 255 - 427
Target Start/End: Original strand, 325134 - 325304
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||| ||||| ||||||||||||||||||  || | |||||||||||| ||||||||||||| ||||||||||||||||  | ||||||||||||    
T  325134 tggaccactattaaggttggtccaccatagacat--ttagagttaaagttaacagtcgggatttatttggcaaacggaggaaaacttgagggaccaaaag 325231  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||   |||| |||||||||    
T  325232 gtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattagatcaaataagcct 325304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 250 - 410
Target Start/End: Original strand, 27705258 - 27705418
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||| | ||||||| |||||| |||||||||||| |||||||    
T  27705258 tatggtggaccacttttaaggttggtccaccatagacatcatttggattaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgagggacc 27705357  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||| |||| |||||| ||||||  |||||||||||||| | ||||||| |||||| ||||    
T  27705358 aaaacgtacgttttattaattgtatgaccaaaatgaaaacttgaaattatttgaggaacca 27705418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 249 - 427
Target Start/End: Complemental strand, 22047908 - 22047729
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |||| | |||||| ||||| | | ||||||||| ||||||||||||||||  | |||||    
T  22047908 ttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgaggga 22047809  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||||| |||| |||||| |||||||||||||||||||||| | |||||||||| ||||||||  ||||| |||||||||    
T  22047808 ccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggaccattggatcaaataagcct 22047729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 250 - 424
Target Start/End: Complemental strand, 39604028 - 39603853
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||| ||||| ||||| |||  |||||||| ||||||||||||||||| | ||||||    
T  39604028 tatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtcatgatttatttggcaaacggaggaaaatttgagggac 39603929  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataag 424  Q
    ||||| |||| |||||| |||||||||| ||||||||||| | ||||||| |||||||| ||| ||||| ||||||    
T  39603928 caaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggatcaatggatcaaataag 39603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 30859113 - 30859291
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||||| |||  || ||||| ||||||| ||||||||| | ||||||    
T  30859113 tatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaagacttatttggcaaacagaggaaaatgtgagggac 30859212  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
      ||| |||| |||||| |||||||||||||||||||||| | ||||||| ||||||||| || | ||| |||||||||    
T  30859213 ttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggactaatgaatcaaataagcct 30859291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 250 - 430
Target Start/End: Complemental strand, 30910916 - 30910735
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||||||||||| |||||| |||||| |||||||||||| |||| |||||||| || |||| ||||||||| | ||||||    
T  30910916 tatggtggaccactcttaaggttggtccaccaaagacatcatttggtgttaaagttaacagtcgagatttatttggtaaacagaggaaaatgtgagggac 30910817  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||||||    
T  30910816 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctaaa 30910735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 312 - 429
Target Start/End: Complemental strand, 34894261 - 34894144
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||||| || |||||||||||  ||| |||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||| |||||||||    
T  34894261 gggatttttttggcaaacggagacaaaactaagggaccaaaaggtactttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaa 34894162  T
Q  412 cggatctaataagcctaa 429  Q
     |||||||||||||||||    
T  34894161 tggatctaataagcctaa 34894144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 39605426 - 39605562
Alignment:
Q  263 ttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttt 362  Q
    ||||||||||||||||||||| ||||  ||   ||| |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||| |||  |||    
T  39605426 ttttaagattggtccaccatatacat--ttaaagttgaagttaaccgtcaggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttt 39605523  T
Q  363 tatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    ||| |||||||||||||||||||||| | ||||||||||    
T  39605524 tattaattgtgggaccaaaatgaaaacttgaaattaatt 39605562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 34898966 - 34899072
Alignment:
Q  323 ggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaata 422  Q
    |||||||||||  ||| |||||||||||||| ||||||||||| | || |||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  34898966 ggcaaacggagacaaaactaagggaccaaaatgtactttttattacttatgggaccaaaatgaaaaatgaaaattaattaagggaccaatggatctaata 34899065  T
Q  423 agcctaa 429  Q
    |||||||    
T  34899066 agcctaa 34899072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 250 - 411
Target Start/End: Complemental strand, 8521427 - 8521268
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||| | ||||| ||||||||||||| ||||  || |||||||||||||||||||||||||||| | |  ||||||  |||  | |||||||    
T  8521427 tatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggacc 8521330  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||  |   |||||| | || ||||||||||||||||| | |||||||||| |||||||||    
T  8521329 aaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaagggaccaa 8521268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 312 - 417
Target Start/End: Complemental strand, 24503296 - 24503191
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||||| || ||||||| |||  ||| ||||||||||||||||||| |||||| | || ||||||||||||||||| ||| |||||||| |||||||||    
T  24503296 gggatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggaccaa 24503197  T
Q  412 cggatc 417  Q
     |||||    
T  24503196 tggatc 24503191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 257 - 401
Target Start/End: Complemental strand, 30857965 - 30857823
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| |||||||| |||||||||  ||   |||||||||||| ||   |||||||| | |||| |||||||||||| | |||||||||  |    
T  30857965 gaccacttttaaggttggtccatcatagacat--ttaaagttaaagttaactgttaagatttatttgacaaaaggaggaaaatctgaaggaccaaaacat 30857868  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    || |||||| |||||||||||||||||||||| |  |||||||||    
T  30857867 acgttttattaattgtgggaccaaaatgaaaacttaaaattaatt 30857823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 426
Target Start/End: Original strand, 30912114 - 30912280
Alignment:
Q  258 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 357  Q
    |||||||||||| ||||||||||||||| ||  || | ||||||||||||  | |||||||||| ||||||||||| ||||  | |||||| |||| |      
T  30912114 accacttttaaggttggtccaccatagatat--ttggagttaaagttaacacttgggatttatttggcaaacggagaaaaaggtgagggactaaaacgcc 30912211  T
Q  358 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
      |||||| ||||||||||||||||||||||   |||||||| | |||||| ||  |||||||||||||    
T  30912212 acttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggactaaacgatctaataagcc 30912280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 33173903 - 33174080
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||| ||||||| ||||| ||||||||||||||||||  || |||||||| ||||| | |  ||||||||| ||||||| ||||||||  | ||||||    
T  33173903 tatggtagaccactcttaaggttggtccaccatagacat--ttggggttaaacttaacagccaaggatttatttggcaaacagaggaaaaggtgagggac 33174000  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
     |||| |   ||||||| || ||||||| |||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  33174001 taaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccta 33174080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 1010308 - 1010484
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    ||||| |||||||| ||||| ||||||||||||| ||||  || |||||||||||||||||||||||||||| | |  ||||||  |||  | |||||||    
T  1010308 tatggcggaccactcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggacc 1010405  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    ||||  |   |||||| | || |||||||||||| |||| | |||||||||| |||||||||  || ||| ||||||||    
T  1010406 aaaacatgagttttattagttatgggaccaaaataaaaacttgaaattaattaagggaccaaatgacctattaagccta 1010484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 250 - 430
Target Start/End: Original strand, 22308742 - 22308921
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| | ||||||||||||||||  || |||||||| |||||   |  ||||||||| ||||||||||| ||||| | ||||||    
T  22308742 tatggtggaccactcttaaggtaggtccaccatagacat--ttggggttaaacttaacaaccatggatttatttggcaaacggagcaaaatgtgagggac 22308839  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
     |||| |    |||||| |||| |||||||||||||||||   ||||||| ||  ||||||||  |||||||||||||||||    
T  22308840 taaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattatttaggggaccaaacgatctaataagcctaaa 22308921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 410
Target Start/End: Original strand, 24509040 - 24509138
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    ||||||| || ||||||| |||  ||| ||||||||||||||||||| |||||| | || ||||||||||||||||| ||| |||||||| ||||||||    
T  24509040 gggatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggacca 24509138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 27705156 - 27705221
Alignment:
Q  180 agtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaa 246  Q
    ||||||||||||||||||||||||  | |||||||||| |||||||| |||||||||||||||||||    
T  27705156 agtgttgttgactcactggaagatgtagtagacatgca-gatctaacgatcatcttttaataaaaaa 27705221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 431
Target Start/End: Original strand, 22049122 - 22049259
Alignment:
Q  294 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 393  Q
    |||||||| ||||| |  |||||||||| | ||||| ||||||||  | ||||||||||| |||| |||||| |||| ||||||||||||||||| | ||    
T  22049122 gggttaaacttaacagcagggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttga 22049221  T
Q  394 aattaattgagggaccaacggatctaataagcctaaaa 431  Q
    ||||| ||  ||||| || || || |||||||| ||||    
T  22049222 aattatttaggggactaatggttcaaataagccaaaaa 22049259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 15548413 - 15548323
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaa 338  Q
    |||||||||| || | ||||| ||||||||||| |||||| |||| |||||||| ||||| | | ||||||||| ||||||||||||||||    
T  15548413 ttatggtggatcattcttaaggttggtccaccagagacatcatttagggttaaacttaacaggcaggatttatttggcaaacggaggaaaa 15548323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 41798006 - 41798064
Alignment:
Q  367 aattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 425  Q
    ||||||||||||||||| |||| | ||||||| |||||||||||| ||||| |||||||    
T  41798006 aattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataagc 41798064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Complemental strand, 32757877 - 32757838
Alignment:
Q  372 tgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  32757877 tgggaccaaaatgaaaactggaaattatttgagggaccaa 32757838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 1102791 - 1102736
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 307  Q
    |||||||||||||| ||||| |||||| |||||||||||  || ||||||||||||||    
T  1102791 tatggtggaccactcttaaggttggtctaccatagacat--ttggggttaaagttaac 1102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 4127196 - 4127251
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 307  Q
    |||||||||||||||||||||||| || | |||||||||  || ||||||||||||||    
T  4127196 tatggtggaccacttttaagattgatctatcatagacat--ttggggttaaagttaac 4127251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 10978345 - 10978399
Alignment:
Q  374 ggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    ||||||||||||||| ||||||||||||  ||||||||  |||||| ||||||||    
T  10978345 ggaccaaaatgaaaattggaaattaattaggggaccaaatgatctattaagccta 10978399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 20538120 - 20538066
Alignment:
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||||||| |||| ||||||||||||||||| | ||||||||||  ||||||||    
T  20538120 actttttattaattatgggaccaaaatgaaaatttgaaattaattaggggaccaa 20538066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 250 - 432
Target Start/End: Original strand, 32798474 - 32798656
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||| |||||| ||||||||  ||||||||| | ||||||||| ||||  | ||||||     
T  32798474 tatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtgaggatttatttgacaaacggagaaaaaattgagggact 32798573  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 432  Q
    ||||||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||  | ||| ||||||||||||||    
T  32798574 aaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgcatcaaataagcctaaaaa 32798656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 249 - 427
Target Start/End: Original strand, 44076303 - 44076482
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||||||||| || ||||||  ||| |||||||||||||| ||||||| ||||| ||||| || |||||||||| ||||||||||||||||  | ||| |    
T  44076303 ttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgtagggatttatttggcaaacggaggaaaaattgaggca 44076402  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    ||||||| ||| |||||| ||||||||||||||||| |||| | ||||||| |||||||||||  ||||| |||||||||    
T  44076403 ccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaattatttgagggaccattggatcaaataagcct 44076482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 249 - 426
Target Start/End: Original strand, 45281130 - 45281306
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||| ||||||| ||||| |||||||||| ||||||| |||||| ||||||||||| || |||||||||| |||||| |||||||||||| | |||     
T  45281130 ttatggtagaccactcttaaggttggtccaccgtagacatcatttggattaaagttaactgttgggatttatttggcaaatggaggaaaatctgaaggat 45281229  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||||  || ||||||| |||||| ||||||||||||||| | ||||||| ||||||||| |  ||||| ||||||||    
T  45281230 caaaacata-tttttattaattgttggaccaaaatgaaaacttgaaattatttgagggactattggatcaaataagcc 45281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 398
Target Start/End: Complemental strand, 42870985 - 42870839
Alignment:
Q  253 ggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaa 351  Q
    ||||||||||| ||||||||||||||| ||||||||  |||||| ||||| ||||| ||| ||||| ||||||||||| || |||||  |||||||| ||    
T  42870985 ggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtcaggattcattcggcaaacagacgaaaaagtaagggactaa 42870886  T
Q  352 aaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    || |||| |||||| |||||||||||||||||||||| | |||||||    
T  42870885 aacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 42870839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 275 - 410
Target Start/End: Complemental strand, 4810619 - 4810483
Alignment:
Q  275 tccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtg 373  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| ||||| | | |||||||||  ||| |||||| |||| ||    
T  4810619 tccaccatagacatcatttggggttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatg 4810520  T
Q  374 ggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||||||||| |||| | |||| || |||||||||||    
T  4810519 ggaccaaaataaaaatttgaaagtatttgagggacca 4810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 32695216 - 32695395
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||| | ||||||||||| |||||||||||| ||||||| ||||| ||||| ||| ||| | ||| ||||||| ||||||||  | | ||||    
T  32695216 tatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacggtcaggactaatttggcaaacagaggaaaacgtgaaggac 32695315  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
      ||| |||| |||||| ||||||| |||||||||||||| | ||||||| |||||||||||| | ||| ||||||||||    
T  32695316 ttaaacgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccaatgaatcaaataagccta 32695395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 255 - 429
Target Start/End: Original strand, 42100055 - 42100227
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||||||||| ||||||||||| ||||||  ||   |||||||||||| ||||||| ||||| ||||||||||||||||| | ||||| |||||     
T  42100055 tggaccacttttaaggttggtccaccaaagacat--ttgaagttaaagttaacagtcgggaattatttggcaaacggaggaaaatatgagggatcaaaac 42100152  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 429  Q
    |   ||||||| ||||||| ||||||||||||||   |||||||| | ||||| |||  ||||||||||||||||    
T  42100153 gccatttttattaattgtgagaccaaaatgaaaacatgaaattaaataagggatcaaacgatctaataagcctaa 42100227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 13117575 - 13117752
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||| ||||||||||||||  ||||||||| ||| | || |||||||||||| || |  ||||||||||||| ||||||| ||||||||| | ||||||     
T  13117575 tatgatggaccacttttaaagttggtccactatatagatcatttgggttaaacttgatggtcgggatttatttggcaaacagaggaaaatgtgagggact 13117674  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||| |   ||||||| |||| |||||||||||||||||   |||||||| | |||||||||  ||||||||||||||    
T  13117675 aaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 13117752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 250 - 429
Target Start/End: Complemental strand, 42098737 - 42098558
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||||||||| ||||||||||| |||||| |||| |||||||| ||||| ||| ||||||||| |||||||||||  |||  |  ||||     
T  42098737 tatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaacagtc-ggatttatttggcaaacggagacaaacgtgggggat 42098639  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 429  Q
    ||||| |    |||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||||    
T  42098638 caaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctaa 42098558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 255 - 428
Target Start/End: Complemental strand, 13116497 - 13116326
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||| | |||||||||| |  ||||||||  || | |||||||||||| ||||||||||||| ||||||||||||||||| | | |||| ||||     
T  13116497 tggaccactctgaagattggtctattatagacat--ttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaaggactaaaac 13116400  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |    |||||| ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  13116399 gccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccta 13116326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 32693993 - 32693853
Alignment:
Q  259 ccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtac 358  Q
    ||||||||||| |||||||| |||| ||||  ||   |||||||||||| || |||||||||| ||||||||||||||||||| | ||||||||  |||     
T  32693993 ccacttttaaggttggtccatcatatacat--ttaaagttaaagttaactgttgggatttatttggcaaacggaggaaaatctgaaggaccaaagcgtat 32693896  T
Q  359 tttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
     |||||| |||||||||||||||||||||| |  |||||||||    
T  32693895 gttttattaattgtgggaccaaaatgaaaacttaaaattaatt 32693853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 45281025 - 45281097
Alignment:
Q  176 gttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  45281025 gttaagtgttgttgactca-tggaagatacagtagacatgcatgatctaacgttcatcttttaataaaaaagat 45281097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 314 - 430
Target Start/End: Complemental strand, 28418916 - 28418800
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  28418916 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 28418817  T
Q  414 gatctaataagcctaaa 430  Q
    |||||| ||||||||||    
T  28418816 gatctattaagcctaaa 28418800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 249 - 409
Target Start/End: Complemental strand, 22551180 - 22551022
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||||||||| |||||||||| || |||||||||||| ||  || |||||||| |||||  ||  ||||||||| |||||| |||| ||||  | |||||    
T  22551180 ttatggtggatcacttttaaggtttgtccaccatagagat--ttggggttaaacttaacaatccaggatttatttggcaaatggagaaaaag-tgaggga 22551084  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacc 409  Q
    ||||||| ||| |||||| ||||||||||||||||| |||| | ||||||| ||||||||||    
T  22551083 ccaaaagatacgttttattaattgtgggaccaaaataaaaacttgaaattatttgagggacc 22551022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 313 - 431
Target Start/End: Complemental strand, 26696643 - 26696525
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| |||||| |||||||||  | ||||||||||| |||  |||||| |||||||||||||||||||||| | ||||||||||  |||||||      
T  26696643 ggatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggaccatt 26696544  T
Q  413 ggatctaataagcctaaaa 431  Q
    | ||| |||||||||||||    
T  26696543 gaatcaaataagcctaaaa 26696525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 257 - 398
Target Start/End: Complemental strand, 45279845 - 45279706
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    |||||||||||||| |||||||||||| ||||  || | |||||||||||||||||||||||||| | |||||| |  ||||  | ||||||||||| ||    
T  45279845 gaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcgggatttatttgccaaacgaaaaaaaacttgagggaccaaaacgt 45279748  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    || |||||| ||||||  ||| |||||||||| | |||||||    
T  45279747 acgttttattaattgtatgactaaaatgaaaatttgaaatta 45279706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 296 - 427
Target Start/End: Original strand, 17339537 - 17339668
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||||  | |||||| |||| |   ||||||| |||||| |||||||||||||||   ||||    
T  17339537 gttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaatatgaaa 17339636  T
Q  396 ttaattgagggaccaacggatctaataagcct 427  Q
    |||| | |||||||||  ||||||||||||||    
T  17339637 ttaaataagggaccaaacgatctaataagcct 17339668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 42872133 - 42872309
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||| ||||||| ||||| |||||| |||||||||||  ||  ||||||||||||||||| ||||||||| | ||||||||||||||  | | ||||     
T  42872133 tatggtagaccactcttaaggttggtctaccatagacat--ttgaggttaaagttaaccgtcaggatttatttgacaaacggaggaaaaagtgaaggact 42872230  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||| |||| ||||||  ||| || ||  |||||||||| |  |||||| || ||||||||  ||||| ||||||||||    
T  42872231 aaaacgtacgttttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattggatcaaataagccta 42872309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 423
Target Start/End: Complemental strand, 41629872 - 41629709
Alignment:
Q  258 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 357  Q
    |||||||||||| ||||| |||||||||| |  || | ||| |||||||| ||||||||||||| |||||||||| |||||  | ||||| |||||  ||    
T  41629872 accacttttaaggttggttcaccatagactt--ttggagttcaagttaacggtcgggatttatttggcaaacggaagaaaacttgagggatcaaaatata 41629775  T
Q  358 ctttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataa 423  Q
    | |||||| ||||||| ||||||||| |||| | ||||||| ||  ||||| || ||||| |||||    
T  41629774 cgttttattaattgtgagaccaaaataaaaacttgaaattatttaggggactaatggatcaaataa 41629709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 314 - 427
Target Start/End: Original strand, 28420180 - 28420293
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| | ||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| ||||||| || ||||||||| |    
T  28420180 gatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 28420279  T
Q  414 gatctaataagcct 427  Q
    |||||| |||||||    
T  28420280 gatctattaagcct 28420293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 426
Target Start/End: Complemental strand, 32797245 - 32797136
Alignment:
Q  317 ttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggat 416  Q
    ||||| || ||||||||||||| || ||||||  ||| |||| |||||| |||||||||||||||||||||| | ||||||| || |||||||||  |||    
T  32797245 ttatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggaccaatagat 32797146  T
Q  417 ctaataagcc 426  Q
    | ||||||||    
T  32797145 caaataagcc 32797136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 26696780 - 26696709
Alignment:
Q  177 ttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||| ||||||||||||| |||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||    
T  26696780 ttaagcgttgttgactcac-ggaagatacagtagacatgcataatctaacgatcctcttttaataaaaaagat 26696709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 8571559 - 8571697
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||||||||||| ||||||  ||||||||||||||||||  || |||||||| ||||| | |  |||||||||| || |||||||| ||||  | | |||    
T  8571559 tatggtggaccatttttaaagttggtccaccatagacat--ttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaagga 8571656  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||||| |||| |||||| ||||||  ||||||||||||||    
T  8571657 ccaaaacgtacgttttattaattgtatgaccaaaatgaaaa 8571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 427
Target Start/End: Complemental strand, 17338151 - 17338038
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||| ||||| | |||||| |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||      
T  17338151 gatttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 17338052  T
Q  414 gatctaataagcct 427  Q
    ||| ||||||||||    
T  17338051 gatttaataagcct 17338038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 4810744 - 4810673
Alignment:
Q  177 ttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||||||||||||  |||||||||| |||| ||| |||||||||| ||| ||||||||||||||||||    
T  4810744 ttaagtgttgttgactcaa-ggaagatacaatagatatgtatgatctaacgatcctcttttaataaaaaagat 4810673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 42877791 - 42877722
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttatt 321  Q
    |||||||||||| | ||||| ||||||||||||| ||||  || ||||||||||||||||||||||||||||    
T  42877791 tatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatt 42877722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 312 - 426
Target Start/End: Complemental strand, 8570230 - 8570116
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| ||||||| |||  |||  | ||||||||||| |||| |||||| |||||| |||||||||||||||   ||||||||||  |||||||     
T  8570230 gggatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggaccat 8570131  T
Q  412 cggatctaataagcc 426  Q
     ||||| ||||||||    
T  8570130 tggatcaaataagcc 8570116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 249 - 427
Target Start/End: Complemental strand, 30786851 - 30786673
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggtt--aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggg 346  Q
    ||||| ||||||||||||||  ||| ||||||||||||||  || | |||  ||||||||| ||||| ||||||| ||||||||||| ||||  | ||||    
T  30786851 ttatgatggaccacttttaaagttgatccaccatagacat--ttagagttaaaaagttaacagtcggaatttatttggcaaacggagaaaaaagtgaggg 30786754  T
Q  347 accaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    | |||||  ||| |||||| |||| || || ||||||||||| |  |||||| |||| ||||||  | ||| |||||||||    
T  30786753 atcaaaatatacgttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggaccattgaatcaaataagcct 30786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 211707 - 211594
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  211707 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 211608  T
Q  412 cggatctaataagc 425  Q
      ||||||||||||    
T  211607 atgatctaataagc 211594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 240549 - 240662
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  240549 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 240648  T
Q  412 cggatctaataagc 425  Q
      ||||||||||||    
T  240649 atgatctaataagc 240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 725330 - 725217
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  725330 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 725231  T
Q  412 cggatctaataagc 425  Q
      ||||||||||||    
T  725230 atgatctaataagc 725217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 793904 - 794017
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| || |||||||| ||||  |||||||| |||| ||   |||||| ||||||||||||||||||||||   ||||||| || ||||| |||    
T  793904 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 794003  T
Q  412 cggatctaataagc 425  Q
      ||||||||||||    
T  794004 atgatctaataagc 794017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 38697070 - 38697126
Alignment:
Q  372 tgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    ||||||||||||||||| ||||||||||||||||||||||  || ||| ||||||||    
T  38697070 tgggaccaaaatgaaaactggaaattaattgagggaccaaatgagctattaagccta 38697126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 401
Target Start/End: Original strand, 26697797 - 26697925
Alignment:
Q  271 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 370  Q
    ||||||||||||| ||||  || |||||||| |||||  |  ||||||||||| |||| ||| |||||  | |||||| |||| |||| |||||| ||||    
T  26697797 ttggtccaccataaacat--ttggggttaaacttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaatt 26697894  T
Q  371 gtgggaccaaaatgaaaaatggaaattaatt 401  Q
     |||||| ||||||||||||| ||| |||||    
T  26697895 atgggactaaaatgaaaaatgaaaaataatt 26697925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 388
Target Start/End: Complemental strand, 6397893 - 6397819
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||||||| ||||||||||| ||||  | |||||| |||| |||  |||||| ||||||||||||||||||||||    
T  6397893 gatttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaa 6397819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 24192606 - 24192661
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 307  Q
    |||||||||||||| ||||| ||||||||||||||||||  || ||||||||||||||    
T  24192606 tatggtggaccactcttaaggttggtccaccatagacat--ttagggttaaagttaac 24192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 34504533 - 34504583
Alignment:
Q  199 aagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    |||||| | ||||||||||||||||||| ||| ||||||||||||||||||    
T  34504533 aagatatagtagacatgcatgatctaacgatcctcttttaataaaaaagat 34504583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 17702310 - 17702378
Alignment:
Q  343 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||||  ||  |||||| | || ||||||||||||||||| |||||||||||| |||||||||    
T  17702310 agggaccaaaacataggttttattagttatgggaccaaaatgaaaattggaaattaattaagggaccaa 17702378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 388
Target Start/End: Original strand, 30787588 - 30787680
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    ||||||||||||   | ||||||||| |||||||||| |||||  | |||||||||||  ||  |||||| |||| |||||||||||||||||    
T  30787588 gttaaagttaacatacaggatttatttggcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaa 30787680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 416413 - 416480
Alignment:
Q  182 tgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||  |||| | |||||||| | |||||||||||||||||||||||  |||| ||||||||||    
T  416413 tgttgttggttcacagtaagatacagtggacatgcatgatctaacaatcattctttattaaaaaagat 416480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 38696481 - 38696443
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacat 288  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  38696481 tatggtggaccacttttaaggttggtctaccatagacat 38696443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 31845738 - 31845795
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgt 310  Q
    |||||||||||||| ||||| ||||| ||||||||||||  || |||||||||||||||||    
T  31845738 tatggtggaccactcttaag-ttggttcaccatagacat--ttggggttaaagttaaccgt 31845795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 250 - 444
Target Start/End: Original strand, 41873914 - 41874107
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||||||||||||||||||  ||  ||||||| |||||   |  ||||||||| || ||||||||||||| |||| || |    
T  41873914 tatggtggaccactcttaaggttggtccaccatagacat--ttgtggttaaacttaacaaccaaggatttatttggtaaacggaggaaaagctaaagggc 41874011  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaatactagaataa 444  Q
    |||||| |||||||||| |||| || |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||    
T  41874012 caaaagatactttttattaattatgagaccaagatgaaaaatggaaattaattgagggaccaatggatctaataagcctaaaataaattagaataa 41874107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 45584950 - 45585128
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggtt-aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||| |||| ||||  |||| ||||||||||||| ||||||||| ||| ||||| ||| ||||||||| ||||||||||||||||  | | ||||    
T  45584950 tatggtggagcactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggac 45585049  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||||||||| |||||| ||||||| |||||||||||||| | ||||||| ||||||||| |  ||||| |||||||||    
T  45585050 caaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggactattggatcaaataagcct 45585128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 49802846 - 49803016
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||||| ||||||||||||  || | ||| |||||||||||||||||||||| ||||||||||| ||||  | |||||| |||| ||    
T  49802846 gaccacttttaaggttggtacaccatagacat--ttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaacgt 49802943  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 429  Q
      ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||| ||||||||    
T  49802944 catttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaacaagcctaa 49803016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 250 - 430
Target Start/End: Complemental strand, 15232926 - 15232746
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||| ||||||||||||||  ||||||||| ||| |||| |||||||||||| ||||| |||  |||||||| ||||||| ||||||||| | ||||||     
T  15232926 tatgatggaccacttttaaagttggtccactatatacatcatttgggttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgagggact 15232827  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
    |||| |   ||||||| |||| |||||||||||||||||   |||||||| | |||||||||  |||||||||||||||||    
T  15232826 aaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaatgatctaataagcctaaa 15232746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 401
Target Start/End: Original strand, 15072736 - 15072883
Alignment:
Q  253 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggaccaa 351  Q
    ||||||||||| || || ||||||||||||||||||  ||  ||||||||||||| | |  ||||||||| ||||||||||||||||  |||||||||||    
T  15072736 ggtggaccactctttaggttggtccaccatagacat--ttgaggttaaagttaacagacatggatttatttggcaaacggaggaaaaaataagggaccaa 15072833  T
Q  352 aaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    || |||| |||||| |||||||||||||||||||||| | ||||||||||    
T  15072834 aatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaatt 15072883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 27814460 - 27814309
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggtt-aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 353  Q
    ||||||||||||||  ||||||||||||||||||  || | ||| ||||||||||||||||||||||| ||||||| ||||||||  | |||||||||||    
T  27814460 tggaccacttttaaagttggtccaccatagacat--ttagagttaaaagttaaccgtcgggatttatttggcaaacagaggaaaaaatgagggaccaaaa 27814363  T
Q  354 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgaggga 407  Q
    ||||| |||||| |||| | |||| |||||||||| | ||||||| ||||||||    
T  27814362 ggtacgttttattaattataggactaaaatgaaaacttgaaattatttgaggga 27814309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 46111479 - 46111616
Alignment:
Q  299 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    ||||||||| ||||||||||||| |||||||| |||||||  | ||| |||||||||||| |||||| ||||||||||||||||| |||| | |||||||    
T  46111479 aaagttaacagtcgggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaatta 46111578  T
Q  399 attgagggaccaacggatctaataagcctaaaaaatac 436  Q
     || ||||||||  | ||| ||||||||||||| ||||    
T  46111579 tttaagggaccattgaatcaaataagcctaaaatatac 46111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 250 - 409
Target Start/End: Original strand, 16965068 - 16965228
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||  ||||||||||||| |||| ||||||| ||||| |||||| |||| ||||||| |  ||||||| |||||| ||||||||    
T  16965068 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggac 16965167  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacc 409  Q
     |||| ||  ||||||| ||||||||||||||||||||||   |||||||| | |||||||    
T  16965168 taaaacgtcatttttattaattgtgggaccaaaatgaaaataagaaattaaataagggacc 16965228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 285 - 426
Target Start/End: Original strand, 52628850 - 52628991
Alignment:
Q  285 acataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatg 384  Q
    ||||| || |||||||| ||||| || | |||||||| ||||||||||||||||  | |||||||||||||||| |||||| |||||||||||||||||     
T  52628850 acatatttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatt 52628949  T
Q  385 aaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||| | ||||||| || ||||||| |  |||| ||||||||    
T  52628950 aaaacttgaaattatttaagggaccgatagatcaaataagcc 52628991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 410
Target Start/End: Original strand, 50444651 - 50444800
Alignment:
Q  260 cacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtac 358  Q
    |||| ||||| |||||||| ||||||| |  ||||| |||||||||||| ||  ||||||||| ||||| ||||||||||  | ||||||||||| ||||    
T  50444651 cactcttaaggttggtccaacatagacgt--tttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatgagggaccaaaatgtac 50444748  T
Q  359 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
     |||||| ||||||||||| |||||||||| | ||||||| |||||||||||    
T  50444749 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 50444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 304 - 431
Target Start/End: Original strand, 15234037 - 15234164
Alignment:
Q  304 taaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattga 403  Q
    |||| ||||||||||||| ||||||||||||||||| | |||||| |||| |   ||||||| ||||||||||||||||||||||   |||||||| | |    
T  15234037 taacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataa 15234136  T
Q  404 gggaccaacggatctaataagcctaaaa 431  Q
    ||||||||  ||||||||||||| ||||    
T  15234137 gggaccaaacgatctaataagccaaaaa 15234164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 427
Target Start/End: Complemental strand, 16964006 - 16963831
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||| ||||||||||||||| |||||||| |||| ||||  || | |||||||||||| ||| | ||||||| ||||||||||||||||  | ||||||     
T  16964006 tatgatggaccacttttaaggttggtccatcataaacat--ttagagttaaagttaacagtcagcatttatttggcaaacggaggaaaagatgagggact 16963909  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    ||||     ||||||| ||||||||||||||||||||||   |||||||||| |  ||||||  ||||||||||||||    
T  16963908 aaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaattaattaaaagaccaaacgatctaataagcct 16963831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 398
Target Start/End: Original strand, 35943390 - 35943537
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||| |||| ||||| ||||||||||||||||||  || |||||||| ||||| | |  |||||||||| |||||||| |||||||  | ||| |    
T  35943390 tatggtggatcactcttaaggttggtccaccatagacat--ttagggttaaacttaacagccaggggatttatttggcaaacgaaggaaaaagtgagg-a 35943486  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    |||||| |||| |||||| ||||||||||||||||| |||| | |||||||    
T  35943487 ccaaaatgtacgttttattaattgtgggaccaaaataaaaatttgaaatta 35943537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 432
Target Start/End: Complemental strand, 49801792 - 49801609
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||||||||||||||| |||||  ||| || |||| ||||| ||||||| ||||| ||||| ||||||| ||||||| |||  |||  | |||||    
T  49801792 ttatggtggaccacttttaaggttggtttaccgtaaacatcatttgaggttaaaattaacagtcgg-atttatttggcaaacagagacaaacgtgaggga 49801694  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 432  Q
     |||||     ||||||| ||||||||||||||||||||||    ||||||| | |||||||||  |||||||||||||||||||    
T  49801693 tcaaaacaccatttttattaattgtgggaccaaaatgaaaatataaaattaaataagggaccaaatgatctaataagcctaaaaa 49801609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 323 - 427
Target Start/End: Complemental strand, 52627617 - 52627512
Alignment:
Q  323 ggcaaacggaggaaaatctaagggaccaaaaggtac-tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaat 421  Q
    ||||||||||||||||  ||| || |||||| |||  ||||||| |||||||||||||||||||||| | ||||||| |||||||||||  ||||| |||    
T  52627617 ggcaaacggaggaaaaattaaaggtccaaaatgtatgtttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaat 52627518  T
Q  422 aagcct 427  Q
    ||||||    
T  52627517 aagcct 52627512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 427
Target Start/End: Complemental strand, 14471030 - 14470853
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac-cgtcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||||||||| ||||| ||||||||| |||||| |  || |||||||| ||||| |    ||||||||| |||||||| |||||||  | |||||    
T  14471030 ttatggtggaccactcttaaggttggtccactatagacgt--ttggggttaaacttaacaccgaaggatttatttggcaaacgaaggaaaaagtgaggga 14470933  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |  ||  |||| |||||| |||||||||||||||||||||| | ||||||| ||  |||||||  ||||| |||||||||    
T  14470932 cttaaccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattggatcaaataagcct 14470853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 34351973 - 34352076
Alignment:
Q  325 caaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataag 424  Q
    |||||| |||||||  | |||||||||||||||| |||||| |||||||||||||||||||||| |  |||||| || |||||| |  ||||| ||||||    
T  34351973 caaacgtaggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggactattggatcaaataag 34352072  T
Q  425 ccta 428  Q
    ||||    
T  34352073 ccta 34352076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 427
Target Start/End: Complemental strand, 23091525 - 23091348
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc--gggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||||||||||||||||||  ||||||||||||||||||  ||  | ||||| ||||| | |  |||||||||| ||||||||||| ||||  | || ||    
T  23091525 tatggtggaccacttttaaagttggtccaccatagacat--ttgagattaaacttaacagactagggatttatttggcaaacggagaaaaaagtgagtga 23091428  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||||| |||| |||||| ||||||   |||||||||||||   ||||||| ||  ||||||||  |||| |||||||||    
T  23091427 ccaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaatagatcaaataagcct 23091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 313 - 429
Target Start/End: Complemental strand, 15071453 - 15071337
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| || |||||||||||||  | |||||||||||  ||| |||||| |||| || |||||||||||||| | ||||||| ||  ||||||||     
T  15071453 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaat 15071354  T
Q  413 ggatctaataagcctaa 429  Q
    ||||  |||||||||||    
T  15071353 ggattaaataagcctaa 15071337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 44278354 - 44278442
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    |||| |||| ||||||||||| ||||  | ||||||||||| |||| |||||| ||| |||||||||||||||||| | ||||||||||    
T  44278354 ggatctatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaattaatt 44278442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 428
Target Start/End: Original strand, 24499660 - 24499775
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| || |||||||||||||  | ||||||||||| ||   |||||| ||||||| |||||||||||||| | ||||||| ||  |||||||||    
T  24499660 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaac 24499759  T
Q  413 ggatctaataagccta 428  Q
      ||| ||||||||||    
T  24499760 aaatcaaataagccta 24499775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 51042394 - 51042445
Alignment:
Q  360 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  51042394 ttttattaattgtgggaccaaaatgaaaattggaaattaattaagggaccaa 51042445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 365
Target Start/End: Complemental strand, 46110449 - 46110341
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||||| ||||| ||||||||||||||| ||  || | |||||||||||| |||| ||||||||  |||||||||| ||||  | || ||||||||     
T  46110449 tggaccactcttaaggttggtccaccatagatat--ttagagttaaagttaacagtcgagatttatttagcaaacggagaaaaacttgagtgaccaaaaa 46110352  T
Q  355 gtactttttat 365  Q
    |||| ||||||    
T  46110351 gtacgttttat 46110341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 430
Target Start/End: Original strand, 15746709 - 15746888
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgg-gatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||||||||||||||||||||||  ||   |||||| ||||| || |  |||||||| | |  ||||||  | |  ||||||||    
T  15746709 tatggtggaccactcttaagattggtccaccatagacat--ttgaagttaaacttaacagtggatgatttatttgactgacggagatacaattaagggac 15746806  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
    |||||  |   |||||| | || ||||||||||||||||| ||||||||||||  ||||||||  || ||| ||||||||||    
T  15746807 caaaacatgagttttattacttatgggaccaaaatgaaaattggaaattaattaggggaccaaatgacctattaagcctaaa 15746888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 401
Target Start/End: Complemental strand, 44276251 - 44276145
Alignment:
Q  295 ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaa 394  Q
    ||||||| ||||| ||| ||||||| | | ||||| ||| ||||  | | ||| ||||| |||| |||||| |||| || ||||||||||||||||||||    
T  44276251 ggttaaacttaacagtcaggatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattatgagaccaaaatgaaaaatggaa 44276152  T
Q  395 attaatt 401  Q
    |||||||    
T  44276151 attaatt 44276145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 44999405 - 44999492
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccg-tcgggatttattcggcaaacggaggaaaa 338  Q
    ||||||| |||||| ||| ||||||||||||||||||||  ||  ||||||||||||| | | |||||||||| ||||||| ||||||||    
T  44999405 tatggtgaaccactcttacgattggtccaccatagacat--ttaaggttaaagttaacagctagggatttatttggcaaacagaggaaaa 44999492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 426
Target Start/End: Original strand, 14477734 - 14477909
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg--ggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||||||||| ||| ||||||||| || |||||||||||  || | |||||| |||||  |||  ||||||||| ||||||||||| ||||  | |||||    
T  14477734 tatggtggacaactcttaagattgatctaccatagacat--ttagagttaaacttaaca-tcgaaggatttatttggcaaacggagaaaaaagtgaggga 14477830  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |  ||| |||| |||||| |||||||||| |||| |||||| |  |||||| ||  |||||||  ||||| ||||||||    
T  14477831 cttaaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaattatttatgggaccattggatcaaataagcc 14477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 44278217 - 44278288
Alignment:
Q  177 ttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    |||| ||||||||||| || ||||| || | ||||||||||| ||||||| ||||| ||||||||||||||||    
T  44278217 ttaaatgttgttgacttac-ggaaggtagagtagacatgcataatctaacgatcatgttttaataaaaaagat 44278288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 401
Target Start/End: Original strand, 48096975 - 48097124
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||| ||||||| ||||| ||||||||||||| ||||  ||  ||||||| ||||| || |||||||||| | |  ||||||  ||| |||||||||     
T  48096975 tatggtagaccactcttaaggttggtccaccatatacat--ttgaggttaaacttaacagtagggatttatttgaccgacggagacaaacctaagggact 48097072  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    ||||  |   |||||| | || |||||||||||| |||| ||||||||||||    
T  48097073 aaaacatgagttttattagttatgggaccaaaataaaaattggaaattaatt 48097124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 12666064 - 12665997
Alignment:
Q  182 tgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||| ||| || |||||||| || |||| |||||||||||| | |||||||| ||||||||||    
T  12666064 tgttgttgattcattgtaagatacaataaacatacatgatctaacatttatcttttattaaaaaagat 12665997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Complemental strand, 20064228 - 20064189
Alignment:
Q  372 tgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  20064228 tgggaccaaaatgaaaacgggaaattaattgagggaccaa 20064189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 34350286 - 34350219
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggat 316  Q
    |||||||||||||| ||||| ||| |||||||||||||| |||| |||||||| |||||  |||||||    
T  34350286 tatggtggaccactcttaaggttgatccaccatagacatcatttggggttaaacttaacgatcgggat 34350219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 6049261 - 6049331
Alignment:
Q  176 gttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaa 246  Q
    ||||| ||||||||  ||| || |||||||| ||||||||||||||||||   || |||||||||||||||    
T  6049261 gttaattgttgttggttcattgtaagatacagtagacatgcatgatctaatggtcctcttttaataaaaaa 6049331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 9226158 - 9226196
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacat 288  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  9226158 tatggtggaccacttttaaggttgatccaccatagacat 9226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 13147359 - 13147397
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacat 288  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  13147359 tatggtggaccactattaaggttggtccaccatagacat 13147397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 427
Target Start/End: Complemental strand, 41872686 - 41872573
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||  | || |||  ||| |||| |||||| ||||||  || ||||||||||| | |||||||||  ||||||||       
T  41872686 gatttatttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccatta 41872587  T
Q  414 gatctaataagcct 427  Q
    |||| |||||||||    
T  41872586 gatcaaataagcct 41872573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 388
Target Start/End: Complemental strand, 16123399 - 16123323
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||||||||| |||||||||| |||||  | |||||| |||| ||   |||||| |||||||| |||||||||||||    
T  16123399 gggatttatttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgtggaaccaaaatgaaaa 16123323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 411
Target Start/End: Original strand, 20069954 - 20069990
Alignment:
Q  375 gaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||||||||||||  |||||||||||||||||||||    
T  20069954 gaccaaaatgaaaacgggaaattaattgagggaccaa 20069990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 250 - 428
Target Start/End: Complemental strand, 29219560 - 29219381
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| || |||||||||| ||||||||||||||||  | ||||||    
T  29219560 tatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgagggac 29219461  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | | |||||||  |||||||||||||||    
T  29219460 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaataagccta 29219381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 250 - 428
Target Start/End: Complemental strand, 29332859 - 29332680
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| || |||||||||| ||||||||||||||||  | ||||||    
T  29332859 tatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgagggac 29332760  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | | |||||||  |||||||||||||||    
T  29332759 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaataagccta 29332680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 257 - 426
Target Start/End: Original strand, 17460635 - 17460802
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||||||||||||||||||||||  ||   |||||||||||| ||||||||||||| || |||||||||||||| | ||||||||||| ||    
T  17460635 gaccacttttaagattggtccaccatagacat--ttaaagttaaagttaacggtcgggatttatttgggaaacggaggaaaatttgagggaccaaaacgt 17460732  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    || |||||| |||||||||| ||||||||||| | ||||||||||   ||||||  ||||| ||||||||    
T  17460733 acgttttattaattgtgggatcaaaatgaaaacttgaaattaattagaggaccattggatcaaataagcc 17460802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 250 - 431
Target Start/End: Original strand, 18616947 - 18617129
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||  || |||||||||| ||||||||||||||||  | ||||||    
T  18616947 tatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaatagttgggatttatttggcaaacggaggaaaaggtgagggac 18617046  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
     |||| |   ||||||| ||||||||||||||||||||||   |||||||| | | |||||||  ||||||||||||||||||    
T  18617047 taaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaatgatctaataagcctaaaa 18617129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 250 - 431
Target Start/End: Original strand, 6030412 - 6030593
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||| || |||| ||||| |||||||||| ||||||| |||||||||||||||||| || | |||||||| ||||||  ||||||||| | | ||| |    
T  6030412 tatggtagatcactcttaaggttggtccaccgtagacatcatttgggttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatc 6030511  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
    |||| |||||||| || |||||||||| ||||||||||| |  |||||| ||||||||| |  ||||| |||||||||||||    
T  6030512 aaaacgtacttttaattaattgtgggatcaaaatgaaaacttcaaattatttgagggactattggatcaaataagcctaaaa 6030593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 250 - 410
Target Start/End: Original strand, 11317310 - 11317470
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||| ||||||| ||||| |||||| ||||||||||| ||||| |||||| ||||| ||  ||||||||| | ||||||||||||||  | |||||||    
T  11317310 tatggtagaccactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattgagggacc 11317409  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    ||||  ||  |||||| |||||||||||||||||||||| | ||||||| |||||||||||    
T  11317410 aaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggacca 11317470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 427
Target Start/End: Complemental strand, 43033255 - 43033079
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||||||||| ||||| |||||| |||||||||||  ||  ||||||| |||||  ||| ||||||||| ||||||||||||||||  | |||||    
T  43033255 ttatggtggaccactcttaaggttggtctaccatagacat--ttgaggttaaacttaaca-tcgaggatttatttggcaaacggaggaaaaagtgaggga 43033159  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    ||||||||||| |||||| |||||||||||||||||||||| | ||||||| || ||||| ||  ||||| |||||||||    
T  43033158 ccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggatcattggatcaaataagcct 43033079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 260 - 426
Target Start/End: Complemental strand, 17459418 - 17459251
Alignment:
Q  260 cacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtac 358  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||| ||||  ||| | ||||||| ||||||||||||||||  | ||||||  ||| ||||    
T  17459418 cacttttaagattcgtccaccatagacatcatttggggttaaacttaaaagtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtac 17459319  T
Q  359 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
     |||||| ||||||| |||||||||||||| | ||||||| || |||||| || ||||| ||||||||    
T  17459318 gttttattaattgtgtgaccaaaatgaaaacttgaaattatttaagggactaatggatcaaataagcc 17459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 253 - 411
Target Start/End: Complemental strand, 11316102 - 11315946
Alignment:
Q  253 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaa 352  Q
    ||||||||| ||||||| ||| ||||||||||||||  || |  ||||| ||||| | ||||||||||| |||||||||||||||| || ||||||  ||    
T  11316102 ggtggaccatttttaaggttgatccaccatagacat--ttggaattaaacttaacagccgggatttatttggcaaacggaggaaaacctgagggacttaa 11316005  T
Q  353 aggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    | |||| |||||| |||||||||||||||||||||| | ||||||| ||  ||||||||    
T  11316004 acgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaa 11315946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 297 - 432
Target Start/End: Original strand, 28562798 - 28562933
Alignment:
Q  297 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 396  Q
    ||||| ||||| ||| ||||||||| | ||||||||||||||  | |||||||||||||||  |||||| |||| ||||||||||||||||| | |||||    
T  28562798 ttaaacttaacagtctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaat 28562897  T
Q  397 taattgagggaccaacggatctaataagcctaaaaa 432  Q
    || |||||||||||  | ||| ||||||||||||||    
T  28562898 tatttgagggaccattgaatcaaataagcctaaaaa 28562933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 254 - 427
Target Start/End: Complemental strand, 32469319 - 32469145
Alignment:
Q  254 gtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 353  Q
    |||||||||| ||||  ||||||||||||| |||||||||| |||||| |||||  |  ||||||||| ||||| ||||||||||  | | |||||||||    
T  32469319 gtggaccactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggatttatttggcaa-cggaggaaaaagtgaaggaccaaaa 32469221  T
Q  354 ggtact--ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||||   |||||| |||||||||| ||||||||||| | ||||||| |||||||||||  | ||| |||||||||    
T  32469220 ggtacacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataagcct 32469145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 18615643 - 18615510
Alignment:
Q  297 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 396  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| || ||||| |||| |   ||||||| ||||||| ||||||||||||||   |||||    
T  18615643 ttaaaattaacagtcgggatttatttggcaaacggaggaaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatgaaaatatgaaat 18615544  T
Q  397 taattgagggaccaacggatctaataagcctaaa 430  Q
    ||| | |||||||||  |||||||||||| ||||    
T  18615543 taaataagggaccaaacgatctaataagcataaa 18615510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 426
Target Start/End: Original strand, 29220865 - 29220994
Alignment:
Q  297 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 396  Q
    ||||| ||||| ||||||||| ||| ||||||| ||||||||| |||||||| |||| |   ||||||| ||||||||||||||||||||||   |||||    
T  29220865 ttaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaat 29220964  T
Q  397 taattgagggaccaacggatctaataagcc 426  Q
    ||| | |||||||||  |||||||||||||    
T  29220965 taaataagggaccaaacgatctaataagcc 29220994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 426
Target Start/End: Original strand, 29334164 - 29334293
Alignment:
Q  297 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 396  Q
    ||||| ||||| ||||||||| ||| ||||||| ||||||||| |||||||| |||| |   ||||||| ||||||||||||||||||||||   |||||    
T  29334164 ttaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaat 29334263  T
Q  397 taattgagggaccaacggatctaataagcc 426  Q
    ||| | |||||||||  |||||||||||||    
T  29334264 taaataagggaccaaacgatctaataagcc 29334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 250 - 410
Target Start/End: Original strand, 42641803 - 42641962
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||| ||||||| ||||| |||| ||||||||||||| ||||||||| || ||||  ||  ||||||||| ||||||||||  ||||  |  ||||||    
T  42641803 tatggtagaccactcttaaggttggcccaccatagacatcatttgggttgaacttaattgtgaggatttatttggcaaacgga-aaaaaagtgggggacc 42641901  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    ||||||| | |||||| |||| |||||||||||| |||| | ||||||| |||||||||||    
T  42641902 aaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaattatttgagggacca 42641962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 265 - 427
Target Start/End: Original strand, 7437718 - 7437880
Alignment:
Q  265 ttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtacttttta 364  Q
    |||| ||| ||||| |||||| || |||||||||||| ||||  ||  |||||||||  | |||||||||||||  | |||||||||||  ||| |||||    
T  7437718 ttaaaattagtccatcatagatattatttgggttaaacttaattgttaggatttattttgtaaacggaggaaaaattgagggaccaaaatatacgtttta 7437817  T
Q  365 tcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    | |||||||||||||||||||||| | ||||||| |||||  ||||  ||||| |||||||||    
T  7437818 ttaattgtgggaccaaaatgaaaacttgaaattatttgagcaaccattggatcaaataagcct 7437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 6030306 - 6030378
Alignment:
Q  176 gttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  6030306 gttaagtgttgttgactca-tggaagatacagtagacatgcatgatataacgttcatcttttaataaaaaagat 6030378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 433
Target Start/End: Original strand, 32470524 - 32470700
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||| ||||||| ||  ||||||||||||||  || | |||||| ||||| | ||||||||||| | ||||||||||||||  | ||| ||  |||     
T  32470524 tggaccatttttaaggtttatccaccatagacat--ttggagttaaacttaacagccgggatttatttgacaaacggaggaaaacatgaggaacttaaac 32470621  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 433  Q
    |||| |||||| ||||||||||||||||| |||| | ||||||| ||  ||||| || ||||| |||||||| ||||||    
T  32470622 gtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatggatcaaataagccaaaaaaa 32470700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 432
Target Start/End: Complemental strand, 1083153 - 1082980
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||| ||||||||||| ||  || | ||||||||||||  | |||||||| | ||||||||||| ||||  | | |||||||||       
T  1083153 gaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacac 1083056  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 432  Q
      ||||||| || |||||||||||||||||||   |||||||| | |||||||||  ||| |||||||||||||||    
T  1083055 catttttattaaatgtgggaccaaaatgaaaatatgaaattaaataagggaccaaacgatataataagcctaaaaa 1082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 410
Target Start/End: Original strand, 43034477 - 43034573
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||||||| | ||||||||||||||  | |||||||||||||||| |||||| ||||||| ||  |||||||||| | ||||||| |||||||||||    
T  43034477 gatttatttgacaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagattaaaatgaaaacttgaaattatttgagggacca 43034573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 312 - 428
Target Start/End: Complemental strand, 6030717 - 6030601
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| ||||||||||||||||  ||||| || |||| |    |||||| ||||||||||| ||||||||||   |||||||| | |||||||||    
T  6030717 gggatttatttggcaaacggaggaaaaaataaggaactaaaacgccaattttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaa 6030618  T
Q  412 cggatctaataagccta 428  Q
      |||||||||||||||    
T  6030617 acgatctaataagccta 6030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 425
Target Start/End: Complemental strand, 34469068 - 34468957
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||| || |||||| | |||||| |||| ||  ||||||| ||||||| ||||||||||||||   |||||||| | |||||||||      
T  34469068 gatttatttggcaaacagaagaaaatgtgagggactaaaacgtcatttttattaattgtgcgaccaaaatgaaaacatgaaattaaataagggaccaaac 34468969  T
Q  414 gatctaataagc 425  Q
    ||||||||||||    
T  34468968 gatctaataagc 34468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 6028884 - 6028787
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgg-gatttattcggcaaacggaggaaaatctaagggaccaaaa 353  Q
    |||||||||||||||| |||||||||||| ||||  || | ||||||||||||||||||  ||||||| |||||||| || ||||  | |||||||||||    
T  6028884 tggaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcggaaatttatttggcaaacgaagaaaaacttgagggaccaaaa 6028787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 315 - 410
Target Start/End: Complemental strand, 28561477 - 28561382
Alignment:
Q  315 atttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    ||||||| | |||||| |||||||  | |||||||||||| ||| |||||| ||||||| |||||||||||||| |  |||||| || ||||||||    
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggacca 28561382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 431
Target Start/End: Complemental strand, 7436546 - 7436460
Alignment:
Q  345 ggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
    |||||||||||||  |||||| |||||| |||||||||| |||| | ||||||| |||||||||||  ||||| |||| ||| ||||    
T  7436546 ggaccaaaaggtatattttattaattgtaggaccaaaataaaaacttgaaattatttgagggaccattggatcaaatacgccaaaaa 7436460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 426
Target Start/End: Original strand, 1085330 - 1085504
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    ||||||| |||||| ||||   || ||||||||| |||| ||||   ||||| ||||| || | |||||||| ||||||||||||||||  | |||||||    
T  1085330 tatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgtgatttatttggcaaacggaggaaaa--tgagggacc 1085427  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||| |    |||||| || ||||| |||||||||||||   |||||||| | |||||||||   ||||||||||||    
T  1085428 aaaacgccaattttattaaatgtggtaccaaaatgaaaacatgaaattaaataagggaccaaacaatctaataagcc 1085504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 11547834 - 11547745
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaa 338  Q
    ||||||||||||||  |||| ||||||||  |||||||| |||| |||||||| ||||| ||| ||||||||| | |||||| |||||||    
T  11547834 tatggtggaccactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtcaggatttatttgacaaacgaaggaaaa 11547745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 2277504 - 2277572
Alignment:
Q  343 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||||  ||  |||||| | || ||||||||||||||||| ||||||||| ||||||||||||    
T  2277504 agggaccaaaacataagttttattacttatgggaccaaaatgaaaactggaaattatttgagggaccaa 2277572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 44192453 - 44192569
Alignment:
Q  315 atttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacgg 414  Q
    ||||||| | ||||||||||||||| | |||||| |||| |   ||||||| |||| ||||| |||||||||||   |||||||| | |||||||||       
T  44192453 atttatttgacaaacggaggaaaatgtgagggactaaaatgccatttttattaattttgggatcaaaatgaaaacatgaaattaaataagggaccaaaca 44192552  T
Q  415 atctaataagcctaaaa 431  Q
    |||||||||||| ||||    
T  44192553 atctaataagccgaaaa 44192569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 30748753 - 30748686
Alignment:
Q  182 tgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||| ||||   |||||| |||||||||||||||  |||| ||| ||||||||||||||||||    
T  30748753 tgttgttgattcaccataagatatactagacatgcatgaattaacgatcctcttttaataaaaaagat 30748686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 411
Target Start/End: Complemental strand, 34512985 - 34512827
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||| ||| | ||| ||||||||| |||| |    ||||||| ||||| |||  |||||||| | | |||||||| |||| | ||||| |    
T  34512985 tatggtggaccactcttatggttgatccaccatatacattaa---ggttaaacttaacagtcatgatttatttgactaacggaggcaaatttgagggatc 34512889  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||  |   |||||| |||| ||||||||||||||||| ||| ||||||||  ||||||||    
T  34512888 aaaacatgagttttattaattatgggaccaaaatgaaaactggtaattaattaggggaccaa 34512827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 34147188 - 34147130
Alignment:
Q  372 tgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
    ||||||||||||||||| || |||||| ||||||||||||  || ||| ||||||||||    
T  34147188 tgggaccaaaatgaaaactgaaaattatttgagggaccaaatgacctattaagcctaaa 34147130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 21664867 - 21664815
Alignment:
Q  360 ttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    |||||| ||||||| |||||||||||||| | |||||||||| | ||||||||    
T  21664867 ttttatgaattgtgtgaccaaaatgaaaacttgaaattaattaaaggaccaac 21664815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 30749166 - 30749230
Alignment:
Q  182 tgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaa 246  Q
    ||||||||  |||| | |||||||| |||||||||||||||||||  || ||||||||| |||||    
T  30749166 tgttgttggttcaccgtaagatacagtagacatgcatgatctaacggtcctcttttaatcaaaaa 30749230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 8e-38; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 250 - 410
Target Start/End: Complemental strand, 52240051 - 52239891
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||| |||| || | | |||    
T  52240051 tatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaacccttggaatttatttggcaaacggagaaaaacctgaagaacc 52239952  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||| |||| |||||| |||||||||| |||||| |||| | ||||||| |||||||||||    
T  52239951 aaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaattatttgagggacca 52239891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 2312423 - 2312601
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||  |||||||| ||||||||||||||||  | ||||||    
T  2312423 tatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacggtcatgatttatttggcaaacggaggaaaaagtgagggac 2312522  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
      ||| |||| |||||| ||||||||||| |||||| ||| | |||||||  | ||||||||| ||||| |||||||||    
T  2312523 ttaaacgtacgttttattaattgtgggactaaaatggaaacttgaaattatctaagggaccaatggatcaaataagcct 2312601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 250 - 410
Target Start/End: Original strand, 6349494 - 6349655
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||| ||||||||| |||| ||||||| ||||| |||||  ||||||| |||| || ||||||| |||||  | ||||||    
T  6349494 tatggtggaccactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggac 6349593  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||||||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||    
T  6349594 caaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacca 6349655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 255 - 433
Target Start/End: Original strand, 393586 - 393763
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggaccaaaa 353  Q
    ||||||||||||||| ||||||||| ||| ||||  || |  ||||||||||| ||| |||||||||| ||||||||||| ||||  | |||||||||||    
T  393586 tggaccacttttaaggttggtccactataaacat--ttagaattaaagttaacagtccgggatttatttggcaaacggagaaaaaagtgagggaccaaaa 393683  T
Q  354 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 433  Q
    | |||||||||| |||||||||||||||||||||| | ||||||| ||||||||||   ||||| |||||||| ||||||    
T  393684 gatactttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccgttggatcaaataagccaaaaaaa 393763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 430
Target Start/End: Complemental strand, 6348324 - 6348149
Alignment:
Q  253 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaa 352  Q
    ||||||||||| ||||| ||||||||||||||||||  ||  ||||||| |||||| || | ||||||| | ||||| ||||||||  | ||| ||||||    
T  6348324 ggtggaccactcttaaggttggtccaccatagacat--ttgaggttaaacttaaccatcagaatttatttgacaaacagaggaaaaagtgaggaaccaaa 6348227  T
Q  353 aggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
    |||||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||   |||| ||||||||||||    
T  6348226 aggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccatttgatcaaataagcctaaa 6348149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 250 - 430
Target Start/End: Complemental strand, 7707763 - 7707582
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| |||||| |||| |||||| |||||| ||||||| |||||||| ||||||||| ||||||| ||||||||| | | ||||    
T  7707763 tatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatttatttggcaaacagaggaaaatgtgatggac 7707664  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
     |||| ||  ||||||| ||||||||||||||||||||||   |||||||| | |||||| ||  |||||||||| ||||||    
T  7707663 taaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggactaaaagatctaataaacctaaa 7707582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 428
Target Start/End: Complemental strand, 4129117 - 4128989
Alignment:
Q  300 aagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaa 399  Q
    |||||||| ||||||||||||| ||||||||||| ||||  ||||||||||||| |||| |||||| |||||||||||||||||||||| | |||||||     
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaattat 4129018  T
Q  400 ttgagggaccaacggatctaataagccta 428  Q
    |||||| ||||  ||||| ||||||||||    
T  4129017 ttgaggaaccattggatcaaataagccta 4128989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 250 - 423
Target Start/End: Original strand, 27850880 - 27851047
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||| || |||||||||       |||||||||||  | ||||||    
T  27850880 tatggtggaccacttttaaggttggtccaccatagacatcatttgaggttaaacttaactgttgggatttat-------acggaggaaaaattgagggac 27850972  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataa 423  Q
    |||||  ||| |||||| |||||||||||||||||||||| | ||||||| |||||||||||  ||||| |||||    
T  27850973 caaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataa 27851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 428
Target Start/End: Complemental strand, 11968685 - 11968507
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||| ||||||||| ||||| |||||||| |||||||||||| || ||||||||| || | ||| |||||||   ||||||||| ||||||| |||||||    
T  11968685 tatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttattttacaaacggagcaaaatctgagggacc 11968586  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||| |||  |||||| ||||||| |||||||||||||| | ||||||| |||||| ||||   |||| ||||||||||    
T  11968585 aaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattatttgaggaaccataagatcaaataagccta 11968507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 250 - 410
Target Start/End: Complemental strand, 1794586 - 1794425
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||| ||||| ||||||||  ||||||||| | ||||| ||||||||  | |||||     
T  1794586 tatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaaccgttaggatttatttgacaaacagaggaaaaagtgagggat 1794487  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||||||||  |||||| ||||||| || ||||||||||| | ||||||| |||||||||||    
T  1794486 caaaaggtatattttattaattgtgagatcaaaatgaaaacttgaaattatttgagggacca 1794425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 296 - 429
Target Start/End: Complemental strand, 2311051 - 2310918
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    |||||||||||| ||  ||||||||| ||||| ||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||||||| | ||||    
T  2311051 gttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaa 2310952  T
Q  396 ttaattgagggaccaacggatctaataagcctaa 429  Q
    ||||||   ||||||  ||||| |||||||||||    
T  2310951 ttaattagaggaccattggatcaaataagcctaa 2310918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 401
Target Start/End: Complemental strand, 40792914 - 40792774
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||||||||| ||||||||  ||   ||||||||||||  |||||||||||| ||||||||||| ||||||| ||||||||||| ||    
T  40792914 gaccacttttaaggttggtccactatagacat--ttaaagttaaagttaac--tcgggatttatttggcaaacggagaaaaatctgagggaccaaaatgt 40792819  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    |  |||||| |||||||||||||||||||||| |  |||||||||    
T  40792818 atgttttattaattgtgggaccaaaatgaaaacttaaaattaatt 40792774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 271 - 426
Target Start/End: Complemental strand, 1188995 - 1188841
Alignment:
Q  271 ttggtccaccatagacataatttgggttaaa-gttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaat 369  Q
    ||||| ||||||||||||  || |||||||| ||||||  |||||||||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||    
T  1188995 ttggttcaccatagacat--ttagggttaaaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaat 1188898  T
Q  370 tgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |||||||||||||| |||| | ||||||| ||||||||| |  ||||| ||||||||    
T  1188897 tgtgggaccaaaataaaaacttgaaattatttgagggactattggatcaaataagcc 1188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 299 - 428
Target Start/End: Complemental strand, 1587307 - 1587178
Alignment:
Q  299 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    |||||||||| |||||||||||| ||||||||||||||||  | |||||||||||||||| |||||| ||||||| ||| |||||||||| |  ||||||    
T  1587307 aaagttaaccatcgggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaatta 1587208  T
Q  399 attgagggaccaacggatctaataagccta 428  Q
     ||||||||||   ||||| ||||||||||    
T  1587207 tttgagggaccgttggatcaaataagccta 1587178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 15449910 - 15449982
Alignment:
Q  176 gttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaaga 248  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15449910 gttaagtgatgttgactcaccggaagatacactagacatgcatgatctaacgatcatcttttaataaaaaaga 15449982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 432
Target Start/End: Original strand, 37884263 - 37884401
Alignment:
Q  294 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 393  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||||||  ||| |||||||||||||| |||||| |||| |||||| |||||||||| |  |    
T  37884263 gggttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaatttaa 37884362  T
Q  394 aattaattgagggaccaacggatctaataagcctaaaaa 432  Q
    ||||| |||||||||||  | ||| |||||||| |||||    
T  37884363 aattatttgagggaccattgaatcaaataagccaaaaaa 37884401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 24426440 - 24426335
Alignment:
Q  323 ggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaata 422  Q
    ||||||||||||||||  | |||||||||||||||| |||||| ||||||| |||||||||||||| | ||||||| |||||||||||  ||||| ||||    
T  24426440 ggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattggatcaaata 24426341  T
Q  423 agccta 428  Q
    ||||||    
T  24426340 agccta 24426335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 1829921 - 1829768
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggtt-aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaa 353  Q
    ||||||||||||||  ||||||||| ||||||||  || | ||| ||||||||| ||||| ||||||| | |||||| |||||||  | |||||| ||||    
T  1829921 tggaccacttttaaagttggtccacgatagacat--ttagagttaaaagttaacagtcggaatttatttgacaaacgtaggaaaaagtgagggactaaaa 1829824  T
Q  354 ggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacc 409  Q
    | ||| |||||| |||||||||||||||||||||| | ||||||| ||||||||||    
T  1829823 gatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacc 1829768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 7053456 - 7053384
Alignment:
Q  177 ttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  7053456 ttaagtgttgttgactcactgaaagatacagtagacatgcatgatctaacgatcctcttttaataaaaaagat 7053384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 314 - 410
Target Start/End: Complemental strand, 37882944 - 37882848
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    |||||||| ||||||||||||||||  | |||||||||||||||| |||||| ||||||||||| |||||||||| | ||||||| |||||||||||    
T  37882944 gatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattatttgagggacca 37882848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 250 - 433
Target Start/End: Original strand, 42810146 - 42810328
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||||||||| ||| ||||||||||| ||||||||||||  |  |||||||| |||||     ||||||||| ||||||||||||||||| | ||||||     
T  42810146 tatggtggactactcttaagattggttcaccatagacatc-tgggggttaaacttaacaccaaggatttatttggcaaacggaggaaaatgtgagggact 42810244  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 433  Q
     ||| |||| |||||| |||||||||||||||||||||| | ||||||| || |||||| |  ||||| ||||||  |||||||    
T  42810245 taaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggactattggatcaaataagtataaaaaa 42810328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 271 - 428
Target Start/End: Original strand, 10168746 - 10168903
Alignment:
Q  271 ttggtccaccatagacataatttgggttaaagttaaccgtcg-ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaat 369  Q
    ||||||||||||||||||  |  |||||||||||||| |||  ||||||||| ||||||||||||||||| | |||||| |||| |   ||||||| |||    
T  10168746 ttggtccaccatagacatt-tgggggttaaagttaactgtcatggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaat 10168844  T
Q  370 tgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||||||||||||||||||   |||||||| | | |||||||  |||||||||||||||    
T  10168845 tgtgggaccaaaatgaaaacatgaaattaaataatggaccaaacgatctaataagccta 10168903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 297 - 427
Target Start/End: Complemental strand, 42871222 - 42871092
Alignment:
Q  297 ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaat 396  Q
    ||||| ||||| ||| ||||||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||||||||| ||||||||||| | |||||    
T  42871222 ttaaacttaacagtcaggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaat 42871123  T
Q  397 taattgagggaccaacggatctaataagcct 427  Q
    ||||   |||||||  ||||| |||||||||    
T  42871122 taatcaggggaccattggatcaaataagcct 42871092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 250 - 398
Target Start/End: Complemental strand, 52963741 - 52963595
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    |||| |||||||||||||||  |||||||||||||||||  || | |||||||||||| |||| |||||||| | ||||||||| ||||  | |||||||    
T  52963741 tatgatggaccacttttaaggctggtccaccatagacat--ttggagttaaagttaacagtcgagatttatttgacaaacggagaaaaacttgagggacc 52963644  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    ||||  |||  ||||| ||||||| |||||||||||||| | |||||||    
T  52963643 aaaacatacgatttattaattgtgagaccaaaatgaaaacttgaaatta 52963595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 426
Target Start/End: Complemental strand, 390346 - 390215
Alignment:
Q  295 ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaa 394  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||| |  | |||||||||||  ||| |||||| |||||||||||||||||||||| | |||    
T  390346 ggttaaacttaacagtcaggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaa 390247  T
Q  395 attaattgagggaccaacggatctaataagcc 426  Q
    |||| ||  |||||||| | ||| ||||||||    
T  390246 attatttaggggaccaatgaatcaaataagcc 390215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 427
Target Start/End: Original strand, 1831267 - 1831382
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| |  ||| |||||||||  | ||||||||||| |||| |||||| ||||||||||| |||||||||| | |||||||||||||||||||     
T  1831267 gggatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccat 1831366  T
Q  412 cggatctaataagcct 427  Q
     ||||| |||||||||    
T  1831367 tggatcaaataagcct 1831382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 405
Target Start/End: Complemental strand, 27847808 - 27847697
Alignment:
Q  294 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatgga 393  Q
    |||||||| ||||||||| ||||||||| |||||||||| |||||  ||||||||| |||  ||| |||||| ||||||||||||||||| |||| | ||    
T  27847808 gggttaaacttaaccgtctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaattgtgggaccaaaataaaaacttga 27847709  T
Q  394 aattaattgagg 405  Q
    ||||| ||||||    
T  27847708 aattatttgagg 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 264 - 429
Target Start/End: Original strand, 1588044 - 1588210
Alignment:
Q  264 tttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttt 362  Q
    |||||| |||||| ||||||||||| ||||||| ||||| ||||| |||   ||||||| || |||||||||||||  | |||||   ||| |||| |||    
T  1588044 tttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacgtacattt 1588143  T
Q  363 tatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 429  Q
    ||| ||||||||||| |||||||||| |  |||||| ||||||||||||  |||| |||||||||||    
T  1588144 tattaattgtgggactaaaatgaaaacttaaaattatttgagggaccaaaagatcaaataagcctaa 1588210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 317 - 431
Target Start/End: Original strand, 42872308 - 42872422
Alignment:
Q  317 ttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggat 416  Q
    ||||| ||||||||||||||||  | ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||||||||  |||||||  | ||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggaccattgaat 42872407  T
Q  417 ctaataagcctaaaa 431  Q
    | ||||| |||||||    
T  42872408 caaataaacctaaaa 42872422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 312 - 429
Target Start/End: Complemental strand, 10167537 - 10167420
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| | ||||||||||||||| | |||||| |||| | | ||||||| |||||||| |||||||||||||   |||||||| | |||||||||    
T  10167537 gggatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaattaaataagggaccaa 10167438  T
Q  412 cggatctaataagcctaa 429  Q
      ||||||||||||||||    
T  10167437 acgatctaataagcctaa 10167420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 271 - 408
Target Start/End: Original strand, 44503643 - 44503778
Alignment:
Q  271 ttggtccaccatagacataatttgggttaaa-gttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaat 369  Q
    ||||| ||||||||||||  || |||||||| |||||| ||||||||||||| ||||||| ||||||||  | ||||||||||| ||||  ||||| |||    
T  44503643 ttggttcaccatagacat--ttagggttaaaagttaacggtcgggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtac-gtttattaat 44503739  T
Q  370 tgtgggaccaaaatgaaaaatggaaattaattgagggac 408  Q
    |||| ||||||||| |||| | ||||||| |||||||||    
T  44503740 tgtgagaccaaaataaaaacttgaaattatttgagggac 44503778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 31968397 - 31968511
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| ||||||| ||||||||  | | ||||||||| |||| |||||| |||||| |||||||||||||||||  |||||||||  ||||||       
T  31968397 ggatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggaccgtt 31968496  T
Q  413 ggatctaataagcct 427  Q
    |||||||||||||||    
T  31968497 ggatctaataagcct 31968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 427
Target Start/End: Complemental strand, 23202020 - 23201843
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    ||||||| |||||| ||||   || ||||||||| |||| ||||   ||||| ||||| || |||||||||| ||||||||||||||||  | |||||||    
T  23202020 tatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgggatttatttggcaaacggaggaaaaggtgagggacc 23201921  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||| |   ||||||| || |||||||||||||| ||||   |||||||| | |||||||||   |||||||||||||    
T  23201920 aaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaattaaataagggaccaaacaatctaataagcct 23201843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 427
Target Start/End: Original strand, 15450017 - 15450194
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgg-gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||||||||| |||||||  |||||| |||||| ||||||||   |||||||| ||||||||||||||||  |||| |||    
T  15450017 tatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgt-aagatttatttggcaaacggaggaaaaggtaagcgac 15450115  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
      ||| |||| |||||| || |  |||| || ||||||||   ||||||| || ||||||||| | ||| |||||||||    
T  15450116 ttaaacgtacgttttattaactaagggatcataatgaaaacctgaaattatttaagggaccaatgaatcaaataagcct 15450194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 257 - 426
Target Start/End: Original strand, 23203904 - 23204071
Alignment:
Q  257 gaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggt 356  Q
    ||||||||||||| ||| ||||||||||| ||  || | |||||||||||   | |||||||| | ||||||||||| ||||  | | ||||||||| |     
T  23203904 gaccacttttaaggttgatccaccatagatat--ttagagttaaagttaatacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacgc 23204001  T
Q  357 actttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
      ||||||| || |||||||||||||||||||   |||||||| | |||||||||  |||||||||||||    
T  23204002 catttttattaaatgtgggaccaaaatgaaaatatgaaattaaataagggaccaaacgatctaataagcc 23204071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 42872169 - 42872238
Alignment:
Q  179 aagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaagat 249  Q
    ||||||||||||||||||| |||||||| |||| |||||| ||||||| ||| ||||||||||||||||||    
T  42872169 aagtgttgttgactcactg-aagatacagtagatatgcataatctaacgatcctcttttaataaaaaagat 42872238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 388
Target Start/End: Original strand, 52241105 - 52241235
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    |||||||||||||||  ||||| |||||||| ||  || | |||||||||||| ||||| ||||||| ||||||||||||||||  | ||| | |||||     
T  52241105 tggaccacttttaaggatggtc-accatagatat--ttggagttaaagttaacggtcggaatttatttggcaaacggaggaaaagatgaggaatcaaaac 52241201  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    |||| |||||| |||||||| | |||||||||||    
T  52241202 gtacgttttattaattgtggaatcaaaatgaaaa 52241235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 296 - 432
Target Start/End: Original strand, 54866619 - 54866754
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    |||||| ||||| |||  |||||||| ||||||||||||||||  |||||||| ||||     ||||||| |||||||| |||||||||||||   ||||    
T  54866619 gttaaacttaacagtcatgatttatttggcaaacggaggaaaacgtaagggactaaaacaccatttttattaattgtgg-accaaaatgaaaatatgaaa 54866717  T
Q  396 ttaattgagggaccaacggatctaataagcctaaaaa 432  Q
    |||| | |||||||||  ||||||||||||| |||||    
T  54866718 ttaaataagggaccaaacgatctaataagccaaaaaa 54866754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 433
Target Start/End: Complemental strand, 33231564 - 33231380
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaacc-gtcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||||||||||||||| |||| || |||||||||||||||  |  |||||||| |||||  ||  | ||||||| ||||||||| | ||||  | |||||    
T  33231564 ttatggtggaccacttctaaggtttgtccaccatagacatt-tgagggttaaacttaacaagtatgaatttatttggcaaacggtgaaaaagatgaggga 33231466  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaa 433  Q
    | ||||     ||||||| ||||||||||| ||||||||||   |||||||| | |||||||||  ||||||||||||||| ||||    
T  33231465 ctaaaacaccatttttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaaatgatctaataagcctagaaaa 33231380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 429
Target Start/End: Complemental strand, 50547081 - 50546901
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccg-tcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||||||||||||||| |||| ||  ||| ||||||||||  |  |||||||| ||||| | | |||||||||| ||||||||| ||||||  | |||||    
T  50547081 ttatggtggaccacttctaaggtttatccgccatagacatt-tgagggttaaacttaacaggtagggatttatttggcaaacggtggaaaagatgaggga 50546983  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 429  Q
    | |||| |   ||||||| ||||||||||| |||||||| |   |||||||| | |||||||||  ||||||||| ||||||    
T  50546982 ctaaaacgccatttttattaattgtgggactaaaatgaagacatgaaattaaataagggaccaaatgatctaatacgcctaa 50546901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 401
Target Start/End: Complemental strand, 31965946 - 31965858
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    ||||||||| ||||||||||||||||  | ||||||||||| |||| |||| | |||||| |||||| ||| |||| | ||||||||||    
T  31965946 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaattaatt 31965858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 426
Target Start/End: Complemental strand, 44501628 - 44501516
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||| ||| ||||  | ||||||  ||| |||| |||||| |||| |||||||| |||||||| | ||||||| |||||||||||| |    
T  44501628 gatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaatg 44501529  T
Q  414 gatctaataagcc 426  Q
    | || ||||||||    
T  44501528 gttcaaataagcc 44501516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 431
Target Start/End: Original strand, 7708740 - 7708913
Alignment:
Q  258 accacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggta 357  Q
    |||||||||||| ||||||||||||||  ||| || | ||||||||||||  | |||||||||| ||||||| ||| ||||  | |||||| |||| |      
T  7708740 accacttttaaggttggtccaccatag--atatttagagttaaagttaacacttgggatttatttggcaaacagagaaaaaggtgagggactaaaacgcc 7708837  T
Q  358 ctttttatcaattgtgggaccaaaatgaaaa---atggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
      |||||| |||||| | |||||||||||||   ||  ||||||| | |||||||||  ||||||||||||||||||    
T  7708838 acttttattaattgtagaaccaaaatgaaaacacat-aaaattaaataagggaccaaacgatctaataagcctaaaa 7708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 388
Target Start/End: Original strand, 33232663 - 33232777
Alignment:
Q  271 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 370  Q
    ||||||||| ||||||||   ||| |||||||||||| |    |||||||| ||||||||||||||||| | |||||| |||| |   ||||||| ||||    
T  33232663 ttggtccacaatagacat---ttgagttaaagttaacggaaaagatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaatt 33232759  T
Q  371 gtgggaccaaaatgaaaa 388  Q
    ||||||||||||| ||||    
T  33232760 gtgggaccaaaataaaaa 33232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 50548228 - 50548303
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    ||||||||| ||||||| ||||||||| | |||||| |||| ||  || |||| ||||||||||||||||||||||    
T  50548228 ggatttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaattgtgggaccaaaatgaaaa 50548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 407
Target Start/End: Complemental strand, 53432235 - 53432079
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||  ||||| ||||  ||||| ||||||||||||  || |||||||| ||||||||| |||||||||| | | |||| ||| |||  | ||||||    
T  53432235 tatggtgagccactcttaaagttggttcaccatagacat--ttggggttaaacttaaccgtcagggatttatttgaccaacgaaggcaaacttgagggac 53432138  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgaggga 407  Q
    |||||  ||  |||||| | || ||||||||||||||||| | |||||||||| |||||    
T  53432137 caaaacataagttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53432079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 426
Target Start/End: Original strand, 1190196 - 1190310
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| ||||||| ||| ||||  | ||| ||  ||| |||| |||||| |||| ||||||||||||||||| |  |||||| ||||||||||||    
T  1190196 gggatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaa 1190295  T
Q  412 cggatctaataagcc 426  Q
     || || ||||||||    
T  1190296 tggttcaaataagcc 1190310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 52240159 - 52240089
Alignment:
Q  176 gttaagtgttgttgactcactggaagatacactagacatgcatgatctaacaatcatcttttaataaaaaa 246  Q
    ||||||| |||||| |||||||||||||||  |||||||||||||| ||||    ||||||||||||||||    
T  52240159 gttaagtattgttggctcactggaagatacggtagacatgcatgatataacggctatcttttaataaaaaa 52240089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 398
Target Start/End: Complemental strand, 54484423 - 54484338
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaa-tggaaatta 398  Q
    |||||||| ||||||| ||||||||| | ||||||||||| | || |||||| |||| ||| |||||||| ||||| |||||||||    
T  54484423 gatttatttggcaaacagaggaaaattttagggaccaaaacgaacgttttattaattatggtaccaaaataaaaaattggaaatta 54484338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 669680 - 669748
Alignment:
Q  343 agggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    ||||||||||| ||   |||||| |||| ||||||||||||||||| || |||||||||| ||||||||    
T  669680 agggaccaaaatgtgagttttattaattatgggaccaaaatgaaaattgaaaattaattgggggaccaa 669748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 4714084 - 4714016
Alignment:
Q  359 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    ||||||| ||||||||||||||||| ||||   |||||||| | |||||||||  ||||||||||||||    
T  4714084 tttttattaattgtgggaccaaaataaaaatatgaaattaaataagggaccaaacgatctaataagcct 4714016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 288
Target Start/End: Complemental strand, 2311119 - 2311088
Alignment:
Q  257 gaccacttttaagattggtccaccatagacat 288  Q
    ||||||||||||||||||||||||||||||||    
T  2311119 gaccacttttaagattggtccaccatagacat 2311088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 19750237 - 19750275
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacat 288  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  19750237 tatggtggacaacttttaagatttgtccaccatagacat 19750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 19789569 - 19789531
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacat 288  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  19789569 tatggtggacaacttttaagatttgtccaccatagacat 19789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 56085520 - 56085465
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaac 307  Q
    |||||||||||||| ||||| || |||||||||||||||  || ||||||||||||||    
T  56085520 tatggtggaccactcttaaggttagtccaccatagacat--ttggggttaaagttaac 56085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 3934345 - 3934309
Alignment:
Q  375 gaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||||||| |||||||||||| |||||||||    
T  3934345 gaccaaaatgaaaactggaaattaattaagggaccaa 3934309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 314 - 427
Target Start/End: Complemental strand, 21237 - 21124
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||| |||| |    
T  21237 gatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaaatgaaaattaattgaggggccaatg 21138  T
Q  414 gatctaataagcct 427  Q
    ||||||||||||||    
T  21137 gatctaataagcct 21124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 253 - 427
Target Start/End: Original strand, 23397301 - 23397473
Alignment:
Q  253 ggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaa 352  Q
    ||||||| ||||||||| ||||||||||||||||||  ||   |||||| ||||| ||||||||||||| ||||||||||||||||  | |||||| |||    
T  23397301 ggtggactacttttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaa 23397398  T
Q  353 aggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    | |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||    
T  23397399 acgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaaatgatctaataagcct 23397473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 5187564 - 5187742
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggacc 349  Q
    ||||||| |||||||||||| ||||||||| |||||||  |||||||||||| ||||||||| ||||||||| ||||||||||  ||||  ||||| ||     
T  5187564 tatggtgaaccacttttaaggttggtccactatagacaacatttgggttaaacttaaccgtcaggatttatttggcaaacggacaaaaaggtaaggaact 5187663  T
Q  350 aaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    |||| |   ||||||| |||| |||||||||||||||||   |||||||| | |||||||||   ||||||||||||||    
T  5187664 aaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaacaatctaataagccta 5187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 15730036 - 15730149
Alignment:
Q  315 atttattcggcaaacggaggaaaatctaagggaccaaaaggtacttttt-atcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||  ||||||||| |||||  | ||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  414 gatctaataagcct 427  Q
     |||||||||||||    
T  15730136 aatctaataagcct 15730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 250 - 431
Target Start/End: Complemental strand, 23392388 - 23392207
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||||||||| ||| |||||| ||| ||| ||||||| ||||| |||||  |  ||||||||| ||||||||||||||||  | ||||||    
T  23392388 tatggtggaccacttttaaggttgatccaccttag-catcatttggggttaaacttaacatttaggatttatttggcaaacggaggaaaaggtgagggac 23392290  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaa 431  Q
      ||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||||||    
T  23392289 ttaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaaatgatctaataagcctaaaa 23392207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 249 - 410
Target Start/End: Original strand, 7311666 - 7311826
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||||||||| ||||| ||||| |||||||||||| |||||| ||||| ||||| ||  ||||||||| ||||||  ||  ||||  ||||||||    
T  7311666 ttatggtggaccactcttaaggttggttcaccatagacatcatttggattaaacttaactgtgaggatttatttggcaaatagataaaaaagtaagggac 7311765  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 410  Q
    ||||||||||  ||||| |||||||||| ||||||||||| |  |||||| || ||||||||    
T  7311766 caaaaggtac-gtttattaattgtgggatcaaaatgaaaacttaaaattatttaagggacca 7311826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 17839127 - 17839259
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||  | |||||| |||| |   ||||||| ||||||||||||||||||||||   ||||    
T  17839127 gttaaaattaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacaagaaa 17839226  T
Q  396 ttaattgagggaccaacggatctaataagccta 428  Q
    |||| | |||||||||  |||||||||||||||    
T  17839227 ttaaataagggaccaaacgatctaataagccta 17839259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 29381672 - 29381850
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    ||||||||| |||| ||||| || |||||||| |||||| ||||||| ||||| ||||| || || ||||||| || |||||||||||||  | | ||||    
T  29381672 tatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaactgttgg-atttatttggtaaacggaggaaaagatgaaggac 29381770  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
     |||| ||  ||||||| |||||||||| |||||||||||   |||||||| | |||||||||  |||||||||||||||    
T  29381771 taaaacgtcatttttattaattgtgggatcaaaatgaaaataagaaattaaataagggaccaaacgatctaataagccta 29381850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 250 - 435
Target Start/End: Complemental strand, 17837790 - 17837605
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataattt-gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||  || ||||||||||||||| |||| |||||||| ||||| ||  ||||||||| || ||||||| |||||  | ||||||    
T  17837790 tatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgt-tggatttatttggtaaacggaagaaaagatgagggac 17837692  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaaata 435  Q
     |||| |   ||||||| |||||||| |||||||||||||    ||||||| | |||||||||  ||||||||||||| ||||||||    
T  17837691 taaaacgccatttttattaattgtggaaccaaaatgaaaacaataaattaaataagggaccaaacgatctaataagccaaaaaaata 17837605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 296 - 426
Target Start/End: Complemental strand, 232303 - 232174
Alignment:
Q  296 gttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaa 394  Q
    |||||||||||| ||  |||||||||| ||||||||||||||||  | |||||| |||| ||   |||||| |||| ||||||||||||||||||| |||    
T  232303 gttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaacgtg--ttttattaattatgggaccaaaatgaaaaattgaa 232206  T
Q  395 attaattgagggaccaacggatctaataagcc 426  Q
    |||| || ||||||||| ||||||| ||||||    
T  232205 attatttaagggaccaatggatctattaagcc 232174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 296 - 432
Target Start/End: Complemental strand, 5186696 - 5186560
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  | | |||  |||| ||   |||||| ||||||| ||||||||||||||   ||||    
T  5186696 gttaaagttaacggtcgggatttatttggcaaacggaggaaaagatgatggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaa 5186597  T
Q  396 ttaattgagggaccaacggatctaataagcctaaaaa 432  Q
    |||| | ||||| |||  |||||||||||||||||||    
T  5186596 ttaaataagggatcaaatgatctaataagcctaaaaa 5186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 255 - 426
Target Start/End: Complemental strand, 29380358 - 29380189
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||| ||||||||| ||| ||||||||| ||||  ||   |||||| ||||| ||||||||||||| |||||||||| |||||  | |||||| ||||     
T  29380358 tggactacttttaaggttgatccaccatatacat--ttgaagttaaaattaacggtcgggatttatttggcaaacggaagaaaaggtgagggactaaaac 29380261  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcc 426  Q
    |   ||||| | ||||||||||||||||||||||   |||||||| | |||||||||  |||||||||||||    
T  29380260 gccatttttgttaattgtgggaccaaaatgaaaacaagaaattaaataagggaccaaatgatctaataagcc 29380189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 427
Target Start/End: Original strand, 18346691 - 18346869
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttg-ggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaaggga 347  Q
    |||| |||||||||| ||||| ||||| |||| || |||| ||||| ||||||| ||||| ||||| ||||||| ||||||| |||  |||  | |||||    
T  18346691 ttatagtggaccactcttaaggttggttcaccgtaaacatcatttgaggttaaaattaacagtcgg-atttatttggcaaacagagacaaacgtgaggga 18346789  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
     ||||| |   ||||||| ||||||||||||||||||||||   |||||||| | |||||||||  ||||||||||||||    
T  18346790 tcaaaacgccatttttattaattgtgggaccaaaatgaaaatatgaaattaaataagggaccaaatgatctaataagcct 18346869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 6452516 - 6452630
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| ||||||||||||||||  | ||||||  ||| |||| |||||| |||| ||||||||||||||||| | ||||||| ||  ||||||||     
T  6452516 ggatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaat 6452615  T
Q  413 ggatctaataagcct 427  Q
    ||||| |||||||||    
T  6452616 ggatcaaataagcct 6452630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 426
Target Start/End: Complemental strand, 6701490 - 6701378
Alignment:
Q  314 gatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacg 413  Q
    |||||||| ||||||||||||||||| | |||||| ||||     ||||||| ||||||||||||||||||||||   |||||||| | |||||||||      
T  6701490 gatttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaattaaataagggaccaaac 6701391  T
Q  414 gatctaataagcc 426  Q
    |||||||||||||    
T  6701390 gatctaataagcc 6701378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 34023982 - 34023883
Alignment:
Q  328 acggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    |||||||||||  | |||||||||||||||| |||||| |||||||| ||||||||||||| |  |||||| |||||||||||   |||| |||||||||    
T  34023982 acggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataagcct 34023883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 426
Target Start/End: Original strand, 6702859 - 6702988
Alignment:
Q  296 gttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaa 395  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||||  | |||||  ||| |  | ||||||| ||||||||||||||||||||||   ||||    
T  6702859 gttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggataaaacgcca-tttttattaattgtgggaccaaaatgaaaatatgaaa 6702957  T
Q  396 ttaattgagggaccaacggatctaataagcc 426  Q
    |||| | |||||||||  |||||||||||||    
T  6702958 ttaaataagggaccaaacgatctaataagcc 6702988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 404
Target Start/End: Original strand, 34024055 - 34024160
Alignment:
Q  299 aaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    |||||||||| |||  | ||||| | ||||||||||||||  | ||||| ||||| |||| |||||| |||||||||||||||||||||| | |||||||    
T  34024055 aaagttaaccatcgaaagttatttgacaaacggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaatta 34024154  T
Q  399 attgag 404  Q
     |||||    
T  34024155 tttgag 34024160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 32506969 - 32507146
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||| ||||||| ||||| ||||||||||||||  ||| || |||||||| ||||| |||  ||||||||| ||||||| ||| ||||| | ||||||    
T  32506969 tatggtagaccactcttaaggttggtccaccatag--atatttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggac 32507066  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
     ||||     ||||||| || ||||||| |||||||||||   |||||||| | || ||||||   ||||||||||||||    
T  32507067 taaaacaccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaataagtgaccaaacaatctaataagccta 32507146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 411
Target Start/End: Complemental strand, 2687342 - 2687243
Alignment:
Q  312 gggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
    |||||||||| ||||||||||||||||| | | |||| |||| |   ||||||| |||||||||| |||||||||||   |||||||| | |||||||||    
T  2687342 gggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccatttttattaattgtgggatcaaaatgaaaacatgaaattaaataagggaccaa 2687243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 428
Target Start/End: Original strand, 2687929 - 2688044
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| ||||||||||  ||||  | |||||| |||| |   ||||||| ||||||||||| ||||||||||   |||||||| | |||||||||     
T  2687929 ggatttatttggcaaacggataaaaaggtgagggactaaaacgccatttttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaaa 2688028  T
Q  413 ggatctaataagccta 428  Q
     |||||||||||||||    
T  2688029 cgatctaataagccta 2688044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 425
Target Start/End: Complemental strand, 7310443 - 7310275
Alignment:
Q  255 tggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaag 354  Q
    ||||||| ||||||| ||||| ||||||||||||  || | |||||| ||||| | || |||||||| || |||||||| |||| || | ||||  |||     
T  7310443 tggaccatttttaaggttggttcaccatagacat--ttggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggacttaaac 7310346  T
Q  355 gtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagc 425  Q
     ||| |||||| |||| ||||||||||||||||| |  |||||| || | ||||| | ||||| |||||||    
T  7310345 atacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccgatggatcaaataagc 7310275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 427
Target Start/End: Complemental strand, 6452395 - 6452281
Alignment:
Q  313 ggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaac 412  Q
    ||||||||| ||||||||||||||||  | |||||| |||| |||| |||||| |||| | ||||||||| ||||| | ||||||| ||  |||||| |     
T  6452395 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaattatttaggggaccgat 6452296  T
Q  413 ggatctaataagcct 427  Q
    ||||  |||||||||    
T  6452295 ggattaaataagcct 6452281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 359 - 427
Target Start/End: Original strand, 233615 - 233683
Alignment:
Q  359 tttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcct 427  Q
    ||||||| |||| ||||||||||||||||||| ||||||| || | |||||||  |||||| |||||||    
T  233615 tttttattaattatgggaccaaaatgaaaaattgaaattatttaaaggaccaattgatctattaagcct 233683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 12669896 - 12669809
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccg-tcgggatttattcggcaaacggaggaaaa 338  Q
    |||||||||||||| ||||| ||||||||||||| ||||  ||  ||||||||||||| | | | ||||||||  |||||||||||||||    
T  12669896 tatggtggaccactcttaaggttggtccaccatacacat--ttgaggttaaagttaacagttagagatttatttagcaaacggaggaaaa 12669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 27082192 - 27082234
Alignment:
Q  356 tactttttatcaattgtgggaccaaaatgaaaaatggaaatta 398  Q
    |||||||||| |||||||||||||||||||||| | |||||||    
T  27082192 tactttttattaattgtgggaccaaaatgaaaattcgaaatta 27082234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 29722814 - 29722664
Alignment:
Q  271 ttggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttttatcaatt 370  Q
    ||||||||| ||| ||||  ||||| ||||| ||||| || | |||||||| |  ||| |||||||||| | |||||| |||| |   ||||||| ||||    
T  29722814 ttggtccacaatatacat--tttggattaaatttaacagttgagatttatttgcaaaatggaggaaaatgtgagggactaaaacgccatttttattaatt 29722717  T
Q  371 gtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataa 423  Q
     ||||| |||||||||||   |||||||| | |||||||||  ||||||||||    
T  29722716 atgggatcaaaatgaaaacatgaaattaaataagggaccaaatgatctaataa 29722664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 411
Target Start/End: Original strand, 43516 - 43678
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||| ||||| ||||||||| ||| ||||| ||||||||||||||||  | ||||||    
T  43516 tatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcaggacttatttggcaaacggaggaaaaagtgagggac 43615  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaa 411  Q
      |||  ||| |||||| |||| |||||||||||| |||| |  |||||| ||||||||||||    
T  43616 ttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattatttgagggaccaa 43678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 42506 - 42443
Alignment:
Q  325 caaacggaggaaaatctaagggaccaaaaggtactttttatcaattgtgggaccaaaatgaaaa 388  Q
    ||||||||| ||||||| | ||||||||| ||||||||||| |||||||| ||| |||| ||||    
T  42506 caaacggagaaaaatctgaaggaccaaaacgtactttttattaattgtggaaccgaaatcaaaa 42443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 250 - 401
Target Start/End: Complemental strand, 108687 - 108536
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttggg-ttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||||||||| ||||||||||||| | || ||||||| ||||| ||||| |   ||||||||| |||||| |||||||||  | |||||     
T  108687 tatggtggaccacttttaaggttggtccaccata-atattatttggggttaaacttaactgcaaggatttatttggcaaatggaggaaaaaatgagggat 108589  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaatt 401  Q
    ||||| |||| |||||| |||| ||||| ||||||| ||||||||||||||||    
T  108588 caaaacgtacgttttattaattatgggatcaaaatgtaaaatggaaattaatt 108536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 428
Target Start/End: Original strand, 109702 - 109865
Alignment:
Q  263 ttttaagattggtccaccatagacataatttgggttaaagttaaccgtcgggatttattcggcaaacggaggaaaatctaagggaccaaaaggtactttt 362  Q
    ||||||| ||||||||||||| ||||  ||   |||||||||||  || |||||| ||| ||||||  ||| ||||  | |||||| |||| |||| |||    
T  109702 ttttaaggttggtccaccatatacat--ttgaagttaaagttaatagttgggattcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttt 109799  T
Q  363 tatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagccta 428  Q
    ||| |||||| ||||||||||||||| | ||||||| || ||||||||  | ||| ||||||||||    
T  109800 tattaattgtaggaccaaaatgaaaacttgaaattatttaagggaccattgaatcaaataagccta 109865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 249 - 432
Target Start/End: Original strand, 63073 - 63255
Alignment:
Q  249 ttatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaaggga 347  Q
    ||||||||||||| | ||||||||| |||| |||||||||  ||   |||||| ||||| ||| |||||||||| ||||||||||| ||||| | |||||    
T  63073 ttatggtggaccattcttaagattgatccatcatagacat--ttgaagttaaacttaacagtcagggatttatttggcaaacggagaaaaatgtgaggga 63170  T
Q  348 ccaaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaaaa 432  Q
    | |||| |   | ||||| ||||||||||||||||||||||   ||||||| |||  |||||||  |||||||||| ||||||||    
T  63171 ctaaaacgccatctttattaattgtgggaccaaaatgaaaacacgaaattatttggaggaccaaacgatctaataaacctaaaaa 63255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 430
Target Start/End: Original strand, 1149 - 1207
Alignment:
Q  372 tgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaaa 430  Q
    ||||||||||||||||| ||||||||| ||||||||||||  || ||| ||||||||||    
T  1149 tgggaccaaaatgaaaactggaaattatttgagggaccaaatgacctattaagcctaaa 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 429
Target Start/End: Complemental strand, 127606 - 127428
Alignment:
Q  250 tatggtggaccacttttaagattggtccaccatagacataatttgggttaaagttaaccgtc-gggatttattcggcaaacggaggaaaatctaagggac 348  Q
    |||||||||||||| ||||| ||| | ||||||||||||  ||  ||||||||||||| ||| |||||||||| | |  ||||||| |||  | ||||||    
T  127606 tatggtggaccactcttaaggttgtttcaccatagacat--ttgaggttaaagttaactgtcagggatttatttgaccgacggaggcaaacatgagggac 127509  T
Q  349 caaaaggtactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaacggatctaataagcctaa 429  Q
    |||||  |   |||||| | || ||||||||||| ||||| | ||||||||||  ||||||||  || ||| |||||||||    
T  127508 caaaacatgagttttattagttatgggaccaaaacgaaaacttgaaattaattaggggaccaaatgacctattaagcctaa 127428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 731 - 776
Alignment:
Q  294 gggttaaagttaaccgtcgggatttattcggcaaacggaggaaaat 339  Q
    |||||||||||||| ||| ||||||||  |||||||||||||||||    
T  731 gggttaaagttaacagtcaggatttatatggcaaacggaggaaaat 776  T

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