View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_510 (Length: 206)
Name: NF8260A_low_510
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_510 |
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Alignment Details
Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 2950556 - 2950693
Alignment:
| Q |
20 |
aatatattcatttccttccnnnnnnnnctcaaacaattcaaatatatgtatcttttattcccttttctccataatccaatatcttaatcttaattaccca |
119 |
Q |
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| T |
2950556 |
aatatattcatttccttccttttttttctcaaacaattcaaatatatgtatcttttattcccttttctccataatccaatatcttaatcttaattaccca |
2950655 |
T |
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| Q |
120 |
attatttccacgtgttatcttcccttcaagctctattt |
157 |
Q |
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| T |
2950656 |
attatttccacgtgttatcttcccttcaaggtctattt |
2950693 |
T |
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