View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8260A_low_515 (Length: 205)
Name: NF8260A_low_515
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_515 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 25931945 - 25932108
Alignment:
| Q |
21 |
tctccaagaatatcgtaacactggttatcactatcatccacactgtccaatataacttgttcattgctatctccatcatatcacccctctctctttttgt |
120 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25931945 |
tctccaacaatattataacactggttatcactatcatccacactgtccaatataacttgttcattgctatctccatgatatcacccctctctctttttgt |
25932044 |
T |
|
| Q |
121 |
gctcacactgaaatgtttgatttatactcccgagttttatacacttttactatttgacaagtgt |
184 |
Q |
| |
|
||||||||||||||||||||||||||||| | | |||||||||||||| ||||||||||||||| |
|
|
| T |
25932045 |
gctcacactgaaatgtttgatttatactctcaaattttatacactttttctatttgacaagtgt |
25932108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University