View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260A_low_529 (Length: 201)
Name: NF8260A_low_529
Description: NF8260A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260A_low_529 |
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Alignment Details
Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 4349630 - 4349658
Alignment:
| Q |
155 |
ccaataataaccaagagagtatggagtat |
183 |
Q |
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| T |
4349630 |
ccaataataaccaagagagtatggagtat |
4349658 |
T |
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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 4353017 - 4353045
Alignment:
| Q |
155 |
ccaataataaccaagagagtatggagtat |
183 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
4353017 |
ccaataataaccaagagagtatggagtat |
4353045 |
T |
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