View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260_low_15 (Length: 268)
Name: NF8260_low_15
Description: NF8260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 36 - 250
Target Start/End: Original strand, 54890 - 55104
Alignment:
| Q |
36 |
gattaaggcactaagcttcaaaagtaagatacccctaattatgacattttcttattacaattctttctttgtagaatatgtctgcccacaaaagagacct |
135 |
Q |
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| T |
54890 |
gattaaggcactaagcttcaaaagtaagatacccctaattatgacattttcttattacaattctttctttgtagaatatgtctgcccacaaaagagacct |
54989 |
T |
|
| Q |
136 |
tacatacattaatttttctttttataaccagctagagctttataattataataaaaagactaattaattaatatacatatatatgcacggtataagtgga |
235 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54990 |
tacatacattaatttttctttttataaccagctagagctttataattataataaaaagactaattaattaatatacatatatatgcacggtataagtgga |
55089 |
T |
|
| Q |
236 |
atgctatggaatatt |
250 |
Q |
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||||||||||||||| |
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| T |
55090 |
atgctatggaatatt |
55104 |
T |
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