View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8260_low_16 (Length: 265)
Name: NF8260_low_16
Description: NF8260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8260_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 262
Target Start/End: Original strand, 6951477 - 6951723
Alignment:
| Q |
15 |
accaaactcacactaaccatataaaaaggtgccgggggtgtgaaaatgaaatactgagataggagtaacaactgcctgaaacattttcttcttactccta |
114 |
Q |
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| T |
6951477 |
accaaacttacactaaccatataaaaaggtgccgggggtgtgaaaatgaaatactgagataggagtaacaactgcctgaaagattttcttcttacacc-a |
6951575 |
T |
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| Q |
115 |
attggaaaataaaagcccaattttagcgggttaaggcccattcaaatcaccaaatattgcagaaaccctaaagccgtaacggaacacatgctctataaaa |
214 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6951576 |
attggaaaataaaaacccaattttagcgggttaaggcccattcaaatcaccaaatattgcagaaaccctaaagccgtaacggaacacatgctctataaaa |
6951675 |
T |
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| Q |
215 |
ccgaatcatatctttggatcatcaacaccaagtagaataatatagcca |
262 |
Q |
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||||||||||||||||||||| ||||||||||||| |||| ||||||| |
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| T |
6951676 |
ccgaatcatatctttggatcaccaacaccaagtagcataacatagcca |
6951723 |
T |
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