View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8261_low_27 (Length: 363)
Name: NF8261_low_27
Description: NF8261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8261_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 348
Target Start/End: Original strand, 41770860 - 41771191
Alignment:
| Q |
18 |
tatacgaactatgctgctgataaggcgaagcaggcaaaggatgcaacggtgcagaaggctggagaagctaaagatgctacagtgaacaaagctggagagt |
117 |
Q |
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| T |
41770860 |
tatacgaactatgctgctgataaggcgaagcaggcaaaggatgcaacggtgcagaaggctggagaagctaaagatgctacagtgaacaaagctggagagt |
41770959 |
T |
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| Q |
118 |
ataaggattatactgctgagaaggctgtagaagctaaggataccaccgtggggaagcttggagagttgaaggattcagctgcagatgctgctaagagagc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41770960 |
ataaggattatactgctgagaaggctgtagaagctaaggataccaccgtggggaagcttggagagttgaaggattcagctgcagatgctgctaagagagc |
41771059 |
T |
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| Q |
218 |
tatgggtttcttgactggcaagaaagatgaaactaaggagaagacaaaggtttgttgcctaaaattttcaacactttaattaggtcaattt-aataattt |
316 |
Q |
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| T |
41771060 |
tatgggtttcttgactggcaagaaagatgaaactaaggagaagacaagggtttgttgcctaaaattctcaacactttaattaggtcaatttaaataattt |
41771159 |
T |
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| Q |
317 |
catttttgtgaatgtgaaattgtggtgtgtgc |
348 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
41771160 |
catttttgtgaatgtgaaattgtggtgtgtgc |
41771191 |
T |
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