View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8261_low_35 (Length: 310)
Name: NF8261_low_35
Description: NF8261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8261_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 19 - 294
Target Start/End: Original strand, 11696246 - 11696521
Alignment:
| Q |
19 |
ttttgactataacacaatgattagaggaaatgttaatgacatgaaactagaagaagctttgttgctttatgttgatatgattgaaagaggtgttgagcct |
118 |
Q |
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| T |
11696246 |
ttttgactataacacaatgattagaggaaatgttaatgacatgaaactagaagaagctttgttgctttatgttgatatgattgaaagaggtgttgagcct |
11696345 |
T |
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| Q |
119 |
gataaattcacttatccttttgttttaaaggcttgttctttattaggcgtggtcgatgaaggaattcaagttcatggtcatgtttttaagatgggtcttg |
218 |
Q |
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| T |
11696346 |
gataaattcacttatccttttgttttaaaggcttgttctttattaggcgtggtcgatgaaggaattcaagttcatggtcatgtttttaagatgggtcttg |
11696445 |
T |
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| Q |
219 |
aaggtgatgtcattgtgcaaaatagtttgatcaacatgtatggtaagtgtggggagataaagaatgcttgtgatgt |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11696446 |
aaggtgatgtcattgtgcaaaatagtttgatcaacatgtatggtaagtgtggggagataaagaatgcttgtgatgt |
11696521 |
T |
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