View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8261_low_36 (Length: 302)
Name: NF8261_low_36
Description: NF8261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8261_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 5 - 271
Target Start/End: Complemental strand, 29474795 - 29474529
Alignment:
| Q |
5 |
gagaaccagagaatacatacccttgaaaccgataagnnnnnnnntaaatgagcatattgttctttagagaccataaataagcatatatattgttaggaaa |
104 |
Q |
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| T |
29474795 |
gagaaccaaagaatacatacccttgaaaccgataagaaaaaaaataaatgagcatattgttcttttgagaccttaaataagcatatatattgttaggaaa |
29474696 |
T |
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| Q |
105 |
atcatgttgttatgccttttgtggttatgaatattctattcttcacctaagggtgtttccaataaggtgaaaattttgatcaccccacaaatccaaaagg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29474695 |
atcatgttgttatgccttttgtggttatgaatattctattcttcacctaagggtgtttccaataaggtgaaaattttgatcaccccacaaatccaaaagg |
29474596 |
T |
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| Q |
205 |
catcttatgccatttatctttctctaaattccttgtgctggaagttatactcttcacacaaattata |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29474595 |
catcttatgccatttatctttctctaaattccttgtgctggaagttatactcttcacacaaattata |
29474529 |
T |
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