View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8261_low_37 (Length: 291)
Name: NF8261_low_37
Description: NF8261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8261_low_37 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 27111854 - 27112127
Alignment:
| Q |
18 |
ataaacttgttttttacattgtttcttaaaagtcaaaggttagttaagtccaccttatcacttgatttggtgagagctaatgagctatataataaaagag |
117 |
Q |
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| T |
27111854 |
ataaacttgttttttacattgtttcttaaaagtcaaaggttagttaagtccaccttatcacttgatttggtgagagctaatgagctatataataaaagag |
27111953 |
T |
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| Q |
118 |
ctaatatatatacttggcctcttnnnnnnnncttcctttgaaattatatacacacacttgttaatttatacatggttttcatcacttgtttgatcactaa |
217 |
Q |
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| T |
27111954 |
ctaatatatatacttggcctcttaaaaaaaaattcctttgaaattatatacacacacttaataatttatacatggttttcatcactggtttgatcactaa |
27112053 |
T |
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| Q |
218 |
aatcataatcatcgtacaaggttccaattgaaggtccaaggtatggcgcgccatgaactactaaatcatcaggc |
291 |
Q |
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| T |
27112054 |
aatcataatcatcatacaaggttacaattgaaggtccaaagtatggcgcaccatgaacaactaaatcatcaggc |
27112127 |
T |
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