View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8261_low_49 (Length: 241)
Name: NF8261_low_49
Description: NF8261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8261_low_49 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 51405895 - 51405656
Alignment:
| Q |
1 |
aaagtgtctaattccgccagtatagtatagtcttgctctgaaagcttccaaagtcaccttcatttcatttatatatacataaagtacatataaaccatat |
100 |
Q |
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| T |
51405895 |
aaagtgtctaattccgccagtatagtatagtcttgctctgaaagcttccaaagtcaccttcatttcatttatatatacataaagtacatataaaccatat |
51405796 |
T |
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| Q |
101 |
aaataaccaccatcattcctttgatgacatgcacattaattaaattcactaacgtgttggtgtgtctggcacttcaggacaatccaattcctccataaca |
200 |
Q |
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| T |
51405795 |
aaataaccaccatcattcctttgatgacatgcacattaatt-aattcactaacgtgttggtgtgtctggcacttcaggacaatccaattcctccataaca |
51405697 |
T |
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| Q |
201 |
agaggatgaatatcagtagttgaattatattgttgaatcac |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
51405696 |
agaggatgaatatcagtagttgaattatattgttgaatcac |
51405656 |
T |
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