View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8263_high_7 (Length: 313)

Name: NF8263_high_7
Description: NF8263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8263_high_7
NF8263_high_7
[»] chr4 (49 HSPs)
chr4 (7-304)||(52568151-52568448)
chr4 (141-285)||(26329921-26330066)
chr4 (174-301)||(31229293-31229421)
chr4 (141-292)||(52181720-52181872)
chr4 (118-293)||(8408826-8409003)
chr4 (135-262)||(26330005-26330132)
chr4 (141-301)||(5387131-5387292)
chr4 (135-258)||(43098414-43098537)
chr4 (140-300)||(52183392-52183544)
chr4 (135-261)||(22025301-22025426)
chr4 (143-259)||(9320017-9320133)
chr4 (178-288)||(22025095-22025206)
chr4 (140-247)||(41735816-41735923)
chr4 (140-247)||(43098365-43098472)
chr4 (146-296)||(19681203-19681350)
chr4 (144-247)||(2788928-2789031)
chr4 (175-262)||(2788973-2789060)
chr4 (145-253)||(35046437-35046545)
chr4 (199-301)||(52567746-52567849)
chr4 (178-256)||(26329805-26329883)
chr4 (135-285)||(43098181-43098328)
chr4 (140-228)||(19631767-19631855)
chr4 (175-257)||(35046550-35046632)
chr4 (135-228)||(2788789-2788882)
chr4 (187-290)||(8408393-8408497)
chr4 (140-211)||(26329936-26330007)
chr4 (135-262)||(41735752-41735878)
chr4 (143-247)||(2909182-2909286)
chr4 (143-231)||(22025271-22025358)
chr4 (199-293)||(19632212-19632306)
chr4 (177-258)||(36890450-36890533)
chr4 (199-277)||(42116050-42116129)
chr4 (167-247)||(36890502-36890583)
chr4 (204-288)||(36890618-36890703)
chr4 (135-248)||(52865955-52866068)
chr4 (204-247)||(52866367-52866410)
chr4 (263-301)||(30543095-30543133)
chr4 (204-257)||(2508270-2508323)
chr4 (204-296)||(5387584-5387677)
chr4 (140-208)||(52181779-52181847)
chr4 (190-284)||(35023955-35024050)
chr4 (140-211)||(52567747-52567818)
chr4 (141-211)||(8408407-8408477)
chr4 (235-296)||(44915937-44915999)
chr4 (143-208)||(9320077-9320142)
chr4 (249-293)||(19631871-19631916)
chr4 (135-211)||(19632235-19632310)
chr4 (135-211)||(35023745-35023821)
chr4 (144-192)||(35046555-35046603)
[»] chr8 (65 HSPs)
chr8 (144-293)||(9276960-9277109)
chr8 (135-286)||(9770768-9770920)
chr8 (141-296)||(30576632-30576788)
chr8 (140-288)||(36359904-36360053)
chr8 (135-288)||(45017745-45017899)
chr8 (141-301)||(23553359-23553520)
chr8 (118-292)||(9276462-9276639)
chr8 (140-296)||(39701365-39701522)
chr8 (135-307)||(44041249-44041422)
chr8 (140-301)||(39700888-39701050)
chr8 (141-296)||(25730095-25730252)
chr8 (135-301)||(16197027-16197194)
chr8 (135-288)||(29794238-29794392)
chr8 (135-293)||(8713844-8714003)
chr8 (140-301)||(25737107-25737269)
chr8 (143-296)||(25737581-25737736)
chr8 (135-285)||(30576150-30576301)
chr8 (140-248)||(40553260-40553368)
chr8 (141-248)||(11113555-11113662)
chr8 (143-262)||(43422864-43422983)
chr8 (135-262)||(43423100-43423226)
chr8 (144-301)||(31169452-31169609)
chr8 (134-256)||(36360088-36360210)
chr8 (141-248)||(9770565-9770672)
chr8 (199-292)||(13771843-13771937)
chr8 (143-296)||(23553840-23553994)
chr8 (141-292)||(8714330-8714482)
chr8 (135-255)||(40553313-40553433)
chr8 (143-247)||(41190293-41190397)
chr8 (175-296)||(4613778-4613900)
chr8 (135-248)||(14871368-14871482)
chr8 (175-296)||(40552800-40552922)
chr8 (204-296)||(13771425-13771518)
chr8 (135-228)||(29792559-29792652)
chr8 (204-307)||(5358650-5358754)
chr8 (140-248)||(6236250-6236358)
chr8 (168-255)||(39700856-39700943)
chr8 (140-247)||(43422921-43423028)
chr8 (135-256)||(45017934-45018053)
chr8 (135-219)||(36314697-36314781)
chr8 (199-293)||(35433899-35433994)
chr8 (199-285)||(35434313-35434400)
chr8 (199-266)||(36360138-36360205)
chr8 (187-256)||(9770662-9770731)
chr8 (144-284)||(16208674-16208815)
chr8 (199-291)||(34686875-34686968)
chr8 (175-228)||(43423074-43423127)
chr8 (201-301)||(6235793-6235895)
chr8 (201-255)||(9277058-9277112)
chr8 (135-208)||(13771868-13771941)
chr8 (135-211)||(35434328-35434404)
chr8 (199-246)||(23179049-23179096)
chr8 (140-211)||(23553418-23553489)
chr8 (140-211)||(30576658-30576729)
chr8 (199-266)||(36359903-36359970)
chr8 (235-296)||(44040860-44040922)
chr8 (135-212)||(29030175-29030252)
chr8 (122-211)||(44040808-44040896)
chr8 (199-259)||(25737106-25737166)
chr8 (199-259)||(31169555-31169614)
chr8 (199-255)||(39701467-39701523)
chr8 (199-267)||(43423154-43423222)
chr8 (199-261)||(14871416-14871478)
chr8 (211-255)||(9770575-9770619)
chr8 (139-211)||(39701391-39701463)
[»] chr2 (35 HSPs)
chr2 (135-301)||(36196462-36196627)
chr2 (135-301)||(27893519-27893686)
chr2 (121-293)||(31264125-31264301)
chr2 (175-291)||(19080667-19080784)
chr2 (141-286)||(34336039-34336185)
chr2 (126-259)||(30907063-30907196)
chr2 (135-261)||(31263923-31264049)
chr2 (140-256)||(30907137-30907253)
chr2 (135-288)||(30907288-30907440)
chr2 (145-247)||(37542956-37543057)
chr2 (176-266)||(39376401-39376491)
chr2 (176-296)||(11871714-11871835)
chr2 (140-248)||(27893038-27893146)
chr2 (144-259)||(8260392-8260507)
chr2 (204-301)||(20535509-20535608)
chr2 (116-258)||(34336276-34336419)
chr2 (135-260)||(16781049-16781175)
chr2 (191-295)||(15506040-15506145)
chr2 (140-247)||(31263988-31264095)
chr2 (140-247)||(34429684-34429791)
chr2 (141-248)||(41265257-41265364)
chr2 (199-294)||(42117172-42117268)
chr2 (144-213)||(19081055-19081124)
chr2 (175-248)||(20535966-20536039)
chr2 (143-240)||(37543100-37543197)
chr2 (139-247)||(34336227-34336335)
chr2 (204-262)||(30907081-30907139)
chr2 (187-228)||(37543048-37543089)
chr2 (199-262)||(31263927-31263990)
chr2 (204-266)||(19081062-19081124)
chr2 (187-248)||(5116895-5116956)
chr2 (249-301)||(27893138-27893191)
chr2 (135-248)||(39376172-39376284)
chr2 (187-247)||(5116946-5117006)
chr2 (199-270)||(34429683-34429755)
[»] chr6 (37 HSPs)
chr6 (140-301)||(10862545-10862708)
chr6 (144-288)||(32417684-32417829)
chr6 (144-288)||(32423525-32423670)
chr6 (135-301)||(11527535-11527693)
chr6 (144-266)||(16168685-16168807)
chr6 (175-296)||(17180102-17180224)
chr6 (140-282)||(20575416-20575559)
chr6 (135-248)||(16168464-16168577)
chr6 (135-258)||(32417468-32417591)
chr6 (135-258)||(32423309-32423432)
chr6 (141-301)||(24139466-24139626)
chr6 (122-248)||(9902277-9902404)
chr6 (140-247)||(16168644-16168751)
chr6 (144-293)||(10962746-10962896)
chr6 (187-257)||(20575600-20575670)
chr6 (135-248)||(2839624-2839737)
chr6 (140-248)||(2840064-2840172)
chr6 (174-301)||(17179662-17179790)
chr6 (147-301)||(9946672-9946818)
chr6 (135-301)||(28630584-28630742)
chr6 (199-296)||(9901962-9902060)
chr6 (143-248)||(20575660-20575763)
chr6 (175-291)||(11528013-11528130)
chr6 (144-247)||(32417537-32417640)
chr6 (144-247)||(32423378-32423481)
chr6 (204-296)||(10407317-10407410)
chr6 (143-211)||(11528034-11528102)
chr6 (116-211)||(9901939-9902034)
chr6 (204-292)||(10407709-10407799)
chr6 (134-211)||(10407307-10407384)
chr6 (199-270)||(2839628-2839700)
chr6 (199-259)||(2840113-2840173)
chr6 (210-296)||(17132178-17132265)
chr6 (140-211)||(17180128-17180199)
chr6 (199-262)||(20575415-20575478)
chr6 (140-195)||(20575602-20575657)
chr6 (199-243)||(10862665-10862709)
[»] chr1 (34 HSPs)
chr1 (135-293)||(48352708-48352867)
chr1 (144-301)||(27351059-27351217)
chr1 (121-258)||(29419051-29419189)
chr1 (135-293)||(10686680-10686839)
chr1 (178-301)||(8902803-8902927)
chr1 (141-301)||(34254504-34254665)
chr1 (141-262)||(44964072-44964192)
chr1 (135-288)||(1765693-1765846)
chr1 (140-295)||(10685852-10685999)
chr1 (135-241)||(11897841-11897947)
chr1 (117-258)||(17898850-17898992)
chr1 (175-288)||(44963878-44963992)
chr1 (141-248)||(49650578-49650686)
chr1 (144-258)||(1765930-1766044)
chr1 (140-254)||(17898794-17898908)
chr1 (178-248)||(49651013-49651083)
chr1 (174-293)||(4772612-4772723)
chr1 (135-248)||(27351547-27351660)
chr1 (144-256)||(44964018-44964130)
chr1 (144-247)||(1765881-1765984)
chr1 (199-262)||(11897845-11897908)
chr1 (204-291)||(39302339-39302427)
chr1 (211-301)||(48352272-48352366)
chr1 (175-222)||(4030342-4030390)
chr1 (139-211)||(27351114-27351186)
chr1 (199-301)||(8903237-8903340)
chr1 (188-261)||(34254998-34255070)
chr1 (204-287)||(2965499-2965583)
chr1 (135-211)||(8903268-8903344)
chr1 (199-266)||(10685851-10685918)
chr1 (196-248)||(4772171-4772223)
chr1 (139-211)||(8902824-8902896)
chr1 (199-255)||(27351054-27351110)
chr1 (199-255)||(39302753-39302809)
[»] chr7 (80 HSPs)
chr7 (141-301)||(35214811-35214973)
chr7 (123-301)||(1441400-1441571)
chr7 (143-286)||(19925311-19925455)
chr7 (140-296)||(5559111-5559270)
chr7 (143-248)||(31893257-31893362)
chr7 (140-283)||(5805042-5805186)
chr7 (135-262)||(33879514-33879641)
chr7 (141-258)||(21433149-21433266)
chr7 (135-301)||(1286369-1286534)
chr7 (140-286)||(23150643-23150790)
chr7 (140-301)||(27995065-27995227)
chr7 (141-294)||(28256498-28256652)
chr7 (144-301)||(33235042-33235200)
chr7 (140-301)||(39959152-39959314)
chr7 (143-294)||(1349114-1349269)
chr7 (135-248)||(5559630-5559742)
chr7 (135-294)||(20366048-20366206)
chr7 (175-285)||(34951266-34951377)
chr7 (187-296)||(10619851-10619961)
chr7 (141-247)||(22876867-22876972)
chr7 (175-292)||(31175924-31176042)
chr7 (122-259)||(40904677-40904814)
chr7 (141-283)||(1346485-1346624)
chr7 (122-248)||(31893488-31893615)
chr7 (135-296)||(8039662-8039807)
chr7 (135-288)||(21413081-21413234)
chr7 (141-293)||(35215290-35215443)
chr7 (135-259)||(21412865-21412989)
chr7 (187-293)||(23679497-23679603)
chr7 (140-258)||(36566282-36566400)
chr7 (144-288)||(20101831-20101974)
chr7 (135-248)||(28256949-28257062)
chr7 (187-258)||(21433337-21433408)
chr7 (175-293)||(33235518-33235637)
chr7 (135-225)||(39958686-39958776)
chr7 (141-257)||(21412931-21413047)
chr7 (135-247)||(34951475-34951587)
chr7 (175-262)||(5805592-5805679)
chr7 (144-301)||(20183778-20183935)
chr7 (141-247)||(41020137-41020242)
chr7 (175-256)||(4187545-4187626)
chr7 (144-256)||(21433278-21433391)
chr7 (175-293)||(42990539-42990658)
chr7 (140-301)||(8040114-8040266)
chr7 (183-248)||(10620238-10620303)
chr7 (135-260)||(19925104-19925228)
chr7 (140-276)||(20366521-20366658)
chr7 (175-256)||(36566377-36566458)
chr7 (187-286)||(4187663-4187763)
chr7 (186-284)||(6220351-6220449)
chr7 (140-247)||(33879470-33879576)
chr7 (230-296)||(1286768-1286834)
chr7 (141-195)||(1441011-1441065)
chr7 (199-292)||(28104300-28104394)
chr7 (225-301)||(27995538-27995615)
chr7 (204-256)||(1441014-1441066)
chr7 (114-233)||(5075325-5075444)
chr7 (199-262)||(5805041-5805104)
chr7 (146-258)||(29591057-29591171)
chr7 (140-211)||(35214871-35214942)
chr7 (141-211)||(19925327-19925397)
chr7 (141-247)||(34951415-34951521)
chr7 (140-222)||(40904755-40904837)
chr7 (199-259)||(5559110-5559171)
chr7 (118-211)||(28104279-28104372)
chr7 (187-247)||(31893438-31893498)
chr7 (174-242)||(33879349-33879417)
chr7 (140-211)||(5805583-5805654)
chr7 (139-214)||(21433207-21433282)
chr7 (140-211)||(31175946-31176017)
chr7 (199-262)||(31893534-31893597)
chr7 (140-211)||(34951291-34951362)
chr7 (199-262)||(36566281-36566344)
chr7 (205-248)||(36566525-36566568)
chr7 (204-262)||(31893258-31893316)
chr7 (201-262)||(33235039-33235100)
chr7 (143-195)||(4187573-4187625)
chr7 (143-211)||(10619867-10619935)
chr7 (199-247)||(27995064-27995112)
chr7 (199-255)||(34951527-34951583)
[»] chr5 (42 HSPs)
chr5 (144-294)||(36418365-36418516)
chr5 (135-293)||(20728527-20728686)
chr5 (135-289)||(13543083-13543241)
chr5 (141-293)||(30738223-30738377)
chr5 (174-301)||(18248996-18249124)
chr5 (175-301)||(5734502-5734628)
chr5 (122-288)||(6336298-6336458)
chr5 (140-296)||(5734944-5735100)
chr5 (143-256)||(32660266-32660379)
chr5 (175-295)||(30737779-30737900)
chr5 (140-256)||(6336147-6336263)
chr5 (199-293)||(32459430-32459525)
chr5 (121-247)||(35189898-35190024)
chr5 (140-262)||(18951307-18951429)
chr5 (143-248)||(26275511-26275616)
chr5 (175-262)||(32660238-32660325)
chr5 (135-296)||(13538468-13538625)
chr5 (141-248)||(36417891-36417998)
chr5 (135-292)||(13543569-13543727)
chr5 (204-293)||(20729010-20729100)
chr5 (141-222)||(38405573-38405654)
chr5 (208-291)||(18238306-18238390)
chr5 (204-301)||(35891219-35891317)
chr5 (199-248)||(31813954-31814003)
chr5 (140-283)||(1722504-1722648)
chr5 (199-259)||(18951306-18951366)
chr5 (175-246)||(35190426-35190497)
chr5 (135-258)||(14235567-14235688)
chr5 (135-211)||(32459426-32459502)
chr5 (199-262)||(6336146-6336209)
chr5 (140-211)||(36418389-36418460)
chr5 (141-222)||(18951368-18951449)
chr5 (141-293)||(19278710-19278862)
chr5 (204-292)||(32459822-32459911)
chr5 (191-301)||(1722933-1723044)
chr5 (204-259)||(26275512-26275567)
chr5 (204-296)||(26275971-26276055)
chr5 (144-211)||(30737808-30737875)
chr5 (199-262)||(36418458-36418521)
chr5 (204-255)||(38405600-38405651)
chr5 (204-293)||(18237920-18238010)
chr5 (204-258)||(31813894-31813948)
[»] chr3 (20 HSPs)
chr3 (119-301)||(31247602-31247786)
chr3 (175-301)||(4276174-4276301)
chr3 (140-223)||(21377036-21377119)
chr3 (174-296)||(35555565-35555688)
chr3 (121-222)||(50530230-50530332)
chr3 (187-248)||(4276628-4276689)
chr3 (135-295)||(3088066-3088218)
chr3 (135-301)||(21376565-21376732)
chr3 (141-243)||(14964648-14964749)
chr3 (204-291)||(19153885-19153974)
chr3 (204-288)||(54456679-54456764)
chr3 (143-256)||(54456799-54456912)
chr3 (117-211)||(54456651-54456746)
chr3 (204-301)||(31247195-31247292)
chr3 (199-301)||(14629288-14629382)
chr3 (211-292)||(21410273-21410355)
chr3 (204-286)||(24707475-24707558)
chr3 (179-259)||(5505741-5505822)
chr3 (141-247)||(5505692-5505800)
chr3 (175-270)||(54456844-54456940)
[»] scaffold0070 (2 HSPs)
scaffold0070 (140-296)||(28548-28705)
scaffold0070 (199-270)||(28547-28619)
[»] scaffold0019 (4 HSPs)
scaffold0019 (135-266)||(124351-124482)
scaffold0019 (140-228)||(124329-124417)
scaffold0019 (135-256)||(124142-124262)
scaffold0019 (199-261)||(124146-124208)
[»] scaffold0746 (3 HSPs)
scaffold0746 (175-296)||(498-620)
scaffold0746 (140-301)||(25-186)
scaffold0746 (140-211)||(524-595)
[»] scaffold0041 (2 HSPs)
scaffold0041 (122-259)||(45204-45341)
scaffold0041 (140-222)||(45181-45263)
[»] scaffold0027 (2 HSPs)
scaffold0027 (120-296)||(9377-9546)
scaffold0027 (140-242)||(9891-9993)
[»] scaffold0374 (3 HSPs)
scaffold0374 (199-296)||(16176-16274)
scaffold0374 (204-301)||(16565-16663)
scaffold0374 (135-211)||(16172-16248)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 52568448 - 52568151
Alignment:
Q  7 ggacatcacataatatatacacggataaagattcaaactcaaactctcatttattcatacataaaaatgtgggttccagtcactagactacttgacgaaa 106  Q
    |||||| |||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| |||| || || ||||||||||||||| |||     
T  52568448 ggacattacataatatatacatgggtaaagattcaaactcacactctcatttattcatacataaaaatatgggctctagccactagactacttgatgaag 52568349  T
Q  107 ttactattatattttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattt 206  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  52568348 ttactattatattttaggtcaaaaatcattttagtcattttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattt 52568249  T
Q  207 tagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctgatgtccat 304  Q
    |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  52568248 tagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaaatagatcctttagttgataaactatttcaccgttacccctgatgtccat 52568151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 26330066 - 26329921
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||| ||| || |||||| |||||  |||||||||| |||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||    
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaag 26329967  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 285  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||    
T  26329966 tttcaaaagtttcaaataggtcattttagttgataaactatttcac 26329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 31229293 - 31229421
Alignment:
Q  174 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattga 272  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||| ||||||| ||||    
T  31229293 ttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagttga 31229392  T
Q  273 taaactatttcaccgttacccctgatgtc 301  Q
    |||||||||||||||||||| ||| ||||    
T  31229393 taaactatttcaccgttacctctgctgtc 31229421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 141 - 292
Target Start/End: Original strand, 52181720 - 52181872
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || || ||| |||||  ||||| ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||    
T  52181720 tccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcctttaag 52181819  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 292  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||||||||||    
T  52181820 tttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttacc 52181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 293
Target Start/End: Complemental strand, 8409003 - 8408826
Alignment:
Q  118 ttttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgaca 216  Q
    |||| ||||||| |||| |||| ||| |||||||||||||||| || ||| |||||  |||||||||||||| ||||||| | ||  |||||||||||||    
T  8409003 tttttggtcaaatatcacttttggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgaca 8408904  T
Q  217 gaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    |||||  ||||| |||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||| |||||    
T  8408903 gaattttcaagttagtcatttaagtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccgctaccc 8408826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 26330132 - 26330005
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||||||||||||||||||||| || || ||| |||||  ||||||||| ||||||||||||||| || ||||||||| ||||||||||||||| ||||     
T  26330132 ttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattcccaagttagtcc 26330033  T
Q  235 tttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||||||| ||||||||||||||    
T  26330032 tttaagtttcaaaagtttcaaataggtc 26330005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 141 - 301
Target Start/End: Original strand, 5387131 - 5387292
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||  || | | || |||||  |||||||||  |||||||||||||  |||||||||||||||||||||||||||| || | ||||||    
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaag 5387230  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||| ||||||||||| || ||||| ||||||||| |||||||||||||||||| ||||    
T  5387231 tttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttacccctgctgtc 5387292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 43098537 - 43098414
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || | | || |||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||     
T  43098537 ttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcccaagttagtcc 43098438  T
Q  235 tttaagtttcaaatgtttcaaata 258  Q
    ||||||||||||| ||||||||||    
T  43098437 tttaagtttcaaaagtttcaaata 43098414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 52183544 - 52183392
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||| ||| || || ||| |||||  |||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| |||||    
T  52183544 gtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattcccaagccagtcctttaa 52183445  T
Q  240 gtttcaaatgtttcaaataggtcttttaa-ttgataaactatttcaccgttacccctgatgt 300  Q
    |||||         ||||| || |||||| ||||||||||||||||||||||||||||||||    
T  52183444 gtttc---------aaataagttttttaagttgataaactatttcaccgttacccctgatgt 52183392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 135 - 261
Target Start/End: Complemental strand, 22025426 - 22025301
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||||||| |||||||||||||||| |  ||| |||||  || ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||     
T  22025426 ttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaattcccaagttagtcc 22025327  T
Q  235 tttaagtttcaaatgtttcaaataggt 261  Q
    |||||| |||||| |||||||||||||    
T  22025326 tttaag-ttcaaaggtttcaaataggt 22025301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 9320017 - 9320133
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||| | |||||||||| ||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatt 9320116  T
Q  243 tcaaatgtttcaaatag 259  Q
    ||||| |||||||||||    
T  9320117 tcaaaagtttcaaatag 9320133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 288
Target Start/End: Original strand, 22025095 - 22025206
Alignment:
Q  178 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgataaa 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||  ||||| || ||| |||||||||||| ||||||| ||||||||    
T  22025095 aagttacgaaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaa 22025194  T
Q  277 ctatttcaccgt 288  Q
    ||||||||||||    
T  22025195 ctatttcaccgt 22025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 41735816 - 41735923
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||| |||||| |||||| |||||  |||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||||| |||||    
T  41735816 gtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtcctttaa 41735915  T
Q  240 gtttcaaa 247  Q
     |||||||    
T  41735916 atttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 43098472 - 43098365
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| |||||||||| || ||||||||||||| ||||||||||||||| |||| |||||    
T  43098472 gtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtcctttaa 43098373  T
Q  240 gtttcaaa 247  Q
    ||||||||    
T  43098372 gtttcaaa 43098365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 296
Target Start/End: Original strand, 19681203 - 19681350
Alignment:
Q  146 ttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttca 245  Q
    ||||||||||  || || ||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||     |||||| | ||    
T  19681203 ttagtttgaccgaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattccgaagtcc----tttaaggtgca 19681298  T
Q  246 aatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    || | |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  19681299 aaggattcaaataggtcattttagttgataaactatttcaccattacccctg 19681350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 2789031 - 2788928
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || |  ||| |||||  |||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2789031 ttttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcatttaagttt 2788932  T
Q  244 caaa 247  Q
    ||||    
T  2788931 caaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 2789060 - 2788973
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||||    
T  2789060 tttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtc 2788973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 35046437 - 35046545
Alignment:
Q  145 tttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttc 244  Q
    ||||||||||||||| |  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||||||| || | |||| ||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  245 aaatgtttc 253  Q
    ||| |||||    
T  35046537 aaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 301
Target Start/End: Original strand, 52567746 - 52567849
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctga 297  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| ||||| ||||     
T  52567746 ggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttactcctgc 52567845  T
Q  298 tgtc 301  Q
    ||||    
T  52567846 tgtc 52567849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 26329805 - 26329883
Alignment:
Q  178 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 256  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| || | ||||||||||||| ||||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 285
Target Start/End: Original strand, 43098181 - 43098328
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || | | || |||||  ||||||||| |||||||||||||||||| |||||||||  |||| |||| |||| ||||     
T  43098181 ttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccgaagttagtc- 43098279  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcac 285  Q
       |||||||||| |||||||||| || |||||| |||||||||||||||||    
T  43098280 ---aagtttcaaaagtttcaaataagtccttttagttgataaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 19631767 - 19631855
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 228  Q
    ||||||||| ||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  19631767 gtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagt 19631855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 35046632 - 35046550
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 257  Q
    |||||||||||||||||| |||| || ||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||    
T  35046632 tttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 2788789 - 2788882
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 228  Q
    ||||| ||||||||||||||   || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2788789 ttttaatccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagt 2788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 8408393 - 8408497
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 285  Q
    ||||||||| ||| || ||||||||||||| ||||| ||||| |||| ||||||||| ||| |||||||||| ||| ||||| ||||||| |||||||||    
T  8408393 aagtttcaaatagatccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcac 8408492  T
Q  286 cgtta 290  Q
    |||||    
T  8408493 cgtta 8408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 26330007 - 26329936
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||||||| |||||| |||||  |||||||||| |||||||||| |||||||||||||||    
T  26330007 gtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtcattttagtt 26329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 41735752 - 41735878
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||| |||  | || ||| |||||  ||| ||||| ||||||||||| | |||| ||||||||| ||| ||||||||||| ||||     
T  41735752 ttttggtccttttagtttaacaagattctcaagttagttcttttagttttgaaagtttcaact-ggtccttttagtttaacataattcccaagttagtcc 41735850  T
Q  235 tttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||||||| ||||||||||||||    
T  41735851 tttaagtttcaaaagtttcaaataggtc 41735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 2909182 - 2909286
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||| ||| || || ||| |||||  |||||||||||||||| ||||||||||  ||||||||| ||||||||| ||||| |||| ||||| ||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatt 2909281  T
Q  243 tcaaa 247  Q
    |||||    
T  2909282 tcaaa 2909286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 22025358 - 22025271
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcag 231  Q
    |||||||||||||| || |||||| |||||  |||||||| | || ||||||| ||||| |||||||||||||||||||| ||||||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaagtt-caaaggtttcaaataggtaattttagtttgacagaattctcaagtcag 22025271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 19632306 - 19632212
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    |||| ||||||||||||||||||| ||| | |||| ||||||||||||| |||| ||||| ||| ||||| ||||||||||| ||||| |||||||    
T  19632306 ggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagttgataaactacttcactgttaccc 19632212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 36890450 - 36890533
Alignment:
Q  177 taagtttcgaaagtttcaattaggtca-ttttagtttgacagaattcccaag-tcagtcatttaagtttcaaatgtttcaaata 258  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||||| ||| | |||| ||||||||||||| ||||||||||    
T  36890450 taagttttgaaagtttcaattagatcatttttggtttgacagaattccgaagtttagtcttttaagtttcaaaagtttcaaata 36890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 42116129 - 42116050
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaac 277  Q
    |||||||||||||||||| ||||   |||| |||| ||||||||||||| |||| ||||||||| |||||||||||||||    
T  42116129 ggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaac 42116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 36890502 - 36890583
Alignment:
Q  167 tttagtattttaagtttcgaaagtttcaattaggtca-ttttagtttgacagaattcccaagtcagtcatttaagtttcaaa 247  Q
    |||||| ||||||||||| |||||||||| || |||| ||||| ||||||| |||| |||||| |||| |||||||||||||    
T  36890502 tttagtcttttaagtttcaaaagtttcaaataagtcatttttaatttgacataatttccaagttagtcctttaagtttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 36890703 - 36890618
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 288  Q
    ||||||||||||||||||   |||| | |||||||||||| ||| ||||  |||||||| ||||| ||||||||||||||||||||    
T  36890703 ttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttcaccgt 36890618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 52865955 - 52866068
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || || ||| |||||  ||||||||| |||||||| ||||| ||  ||||||||||||| ||| | |||   ||||     
T  52865955 tttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatgctcaatctagtcc 52866054  T
Q  235 tttaagtttcaaat 248  Q
    ||||||||||||||    
T  52866055 tttaagtttcaaat 52866068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 52866410 - 52866367
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaa 247  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  52866410 ttttagtttgacagaattcccaagttagtcctttaagtttcaaa 52866367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 30543133 - 30543095
Alignment:
Q  263 ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  30543133 ttttaattgataaactatttcaccgttacccctgttgtc 30543095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 2508270 - 2508323
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 257  Q
    |||||||||||||||||| |||||| |||| |||||| |||||| |||||||||    
T  2508270 ttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 5387677 - 5387584
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||||||| |||||  |||| || | ||||| ||| ||| |||||||||| || |||| | |||||||| |||||||||||||||||||    
T  5387677 ttttagtttgacaaaattcttaagtaagacctttaaattttaaaagtttcaaatatgtactttcacttgataaattatttcaccgttacccctg 5387584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 52181779 - 52181847
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 208  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||  | |||||||||    
T  52181779 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaacatgtcatttta 52181847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 35024050 - 35023955
Alignment:
Q  190 tttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttca 284  Q
    ||||||||| ||| ||||||||| ||| ||||| ||||| |||| ||||||||| ||| ||||  ||| | || ||||| ||||||||||||||||    
T  35024050 tttcaattatgtctttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaactatttca 35023955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 52567747 - 52567818
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||| || ||  || |||||  |||||||||| ||||||| || |||||||||||||||    
T  52567747 gtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 52567818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 8408407 - 8408477
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||| || || ||| | ||| ||||||||||  |||||||||| || ||||||||||||    
T  8408407 tccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagtt 8408477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 44915937 - 44915999
Alignment:
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||||||| |||| ||| ||||| ||||| |||||||| |||||||| ||||||||||    
T  44915937 tttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcactgttacccctg 44915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 9320077 - 9320142
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 208  Q
    |||||||||||||| || || |||||||||  ||||| |||| |||||||||| ||| ||||||||    
T  9320077 cttttagtttgacagaattctcaatttagtcatttaaatttcaaaagtttcaaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 19631871 - 19631916
Alignment:
Q  249 gtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19631871 gtttcaaataggtcattttagttgataaactattttaccgttaccc 19631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 19632310 - 19632235
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||| ||||||||||||||||| || || ||| ||||| ||| ||||||| ||||||| || || ||||||||||||    
T  19632310 ttttggtccttttagtttgacagaattctcaaattagtcttt-aagtttcaaaagttttaaatatgtcattttagtt 19632235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 35023745 - 35023821
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||||||| | || |   || ||||| ||||| ||||  |||||||||||||| |||||||||||    
T  35023745 ttttagtccttttagtttgaaagaattattaaattagtcttttacgttttaaaagtttcaattagatcattttagtt 35023821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 35046603 - 35046555
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagttt 192  Q
    |||||||||||||||| |||||| |||||  |||||||||| |||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttt 35046555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 144 - 293
Target Start/End: Complemental strand, 9277109 - 9276960
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || |||||| ||||| |||||||||||||||||||||||||| || ||||||||||| |||||| |||||| |||| |||||||||    
T  9277109 ttttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaagttt 9277010  T
Q  244 caaatgtttcaaataggtcttttaattgataaactatttcaccgttaccc 293  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  9277009 caaaagtttcaaataggtcttttagttgataaactatttcaccgttaccc 9276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 135 - 286
Target Start/End: Complemental strand, 9770920 - 9770768
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  9770920 ttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattcccaagttagtcc 9770821  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcacc 286  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  9770820 tttaattttcaaaagtttcaaataggtccttttagttgataaactatttcacc 9770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 141 - 296
Target Start/End: Complemental strand, 30576788 - 30576632
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || |  ||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  30576788 tccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattcccaagttagtcctttaag 30576689  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||    
T  30576688 tttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacccctg 30576632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 36359904 - 36360053
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || | |||| |||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  36359904 gtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctttaa 36360003  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 288  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||| |||||    
T  36360004 gttttaaaagtttcaaataggtcattttagttgataaactattttaccgt 36360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 288
Target Start/End: Original strand, 45017745 - 45017899
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||| | || |||||| |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||| | ||||     
T  45017745 ttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagtcc 45017844  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 288  Q
    |||||| ||||||  ||||||||| ||| ||||||||||||||||||||||||||    
T  45017845 tttaagattcaaaaatttcaaataagtcattttaattgataaactatttcaccgt 45017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 301
Target Start/End: Original strand, 23553359 - 23553520
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || || ||| ||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||  ||| |||||     
T  23553359 tccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggtcttttaaa 23553458  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  23553459 tttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 23553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 292
Target Start/End: Original strand, 9276462 - 9276639
Alignment:
Q  118 ttttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgac 215  Q
    ||||||| |||| |||| |||| ||||||||||||||||| || || |||  ||||  |||||||||| |||||||||||||||||| || |||||||||    
T  9276462 ttttaggccaaatatcacttttggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgac 9276561  T
Q  216 agaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 292  Q
    ||||||| ||||| ||||| |||||||| ||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  9276562 agaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcactgttacc 9276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 39701522 - 39701365
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| |||||  |||||||||| ||||||||||||| ||| ||||||||||| ||||||||||  | ||||||||||    
T  39701522 gtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattcccagattagtcatttaa 39701423  T
Q  240 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||  |||||||||||| |||||| ||||||||||| ||||| ||||||||||    
T  39701422 gtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccctg 39701365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 307
Target Start/End: Complemental strand, 44041422 - 44041249
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |  ||| |||||  ||||||||| |||||||||||||| ||| |||||||||||||||||||| |||| ||||     
T  44041422 tttttgtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtct 44041323  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtccatctc 307  Q
    || ||||||||||  ||||||||| ||| ||||| |||||||||||||||||| |||||| ||||||| |||||    
T  44041322 ttaaagtttcaaaaatttcaaataagtcattttagttgataaactatttcaccattacccatgatgtcaatctc 44041249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 39700888 - 39701050
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || ||  || |||||  |||||||||  ||||||||||||| ||| ||||||||||||| |||||| |||| | || |||||    
T  39700888 gtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatcctttaa 39700987  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  39700988 gtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgttacccctgctgtc 39701050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 141 - 296
Target Start/End: Complemental strand, 25730252 - 25730095
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa-ttaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||| | || | |||| |||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||| |||| |||||    
T  25730252 tccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaa 25730153  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
     ||||||| |||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  25730152 atttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttacccctg 25730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 301
Target Start/End: Original strand, 16197027 - 16197194
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||| |||||||| || |  ||| |||||   ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||    
T  16197027 ttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaattcccaagttaatca 16197126  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||||| || |||||||||| |||||| || ||||| ||||||||| |||| |||| ||||    
T  16197127 tttaagtttcaaaagtatcaaataggtccttttagttaataaattatttcaccattacgcctgttgtc 16197194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 288
Target Start/End: Complemental strand, 29794392 - 29794238
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| ||||||||||||| || |||||| |||||  ||||| ||||||||||||  |||||||| ||||||||||||| |||| |||||| ||||     
T  29794392 ttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatttccaagttagtct 29794293  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 288  Q
    ||||||||||||| ||||||||||| | |||||| |||||||| |||||||||||    
T  29794292 tttaagtttcaaaagtttcaaatagatccttttagttgataaattatttcaccgt 29794238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 293
Target Start/End: Original strand, 8713844 - 8714003
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||||||||||||||| || ||| |||||  |||||||||| |||||||||||||  |  ||||||||||||| ||||| ||||| ||||     
T  8713844 ttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcacaagttagtct 8713943  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    |||||||||||||  |||||||||| || ||||| |||||||| | ||||||||||||||    
T  8713944 tttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttaccc 8714003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 25737107 - 25737269
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||| |||||||||| ||| || |||||||||||| ||||||| |||| |||| |||||    
T  25737107 gtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtcctttaa 25737206  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
     ||||||| |||||| ||| ||| ||||| |||||||||||||||| |||||| |||| ||||    
T  25737207 atttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttacacctgctgtc 25737269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 143 - 296
Target Start/End: Complemental strand, 25737736 - 25737581
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa-ttaggtcattttagtttgacagaattcccaagtcagtcatttaagt 241  Q
    |||||||||||| | || | |||| |||||  ||||||||| ||||||||||| ||||||| ||||| ||||||||||||| ||||| |||| ||||| |    
T  25737736 cttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaat 25737637  T
Q  242 ttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    |||||| ||||||||||  || ||||| ||||||||||||||||| ||||||||||    
T  25737636 ttcaaaagtttcaaatatttcattttagttgataaactatttcactgttacccctg 25737581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 135 - 285
Target Start/End: Original strand, 30576150 - 30576301
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| |||||| |||||| || |||||| |||||  ||||| ||| |||||||||||||| ||| |||||||||| ||||||| |||||| ||||     
T  30576150 ttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttccaagttagtct 30576249  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 285  Q
    ||||||||| ||| ||||||||| |||| ||||| |||||||||||||||||    
T  30576250 tttaagtttgaaaagtttcaaattggtctttttagttgataaactatttcac 30576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 40553368 - 40553260
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || | | || ||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||| | ||||||||    
T  40553368 gtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 40553269  T
Q  240 gtttcaaat 248  Q
    |||||||||    
T  40553268 gtttcaaat 40553260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 11113555 - 11113662
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    ||||||||||||||||||| ||| || |||||  ||||| ||| |||||||||||| ||||| |||||||||||||||||| |||||| |||| ||||||    
T  11113555 tccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtcctttaag 11113654  T
Q  241 tttcaaat 248  Q
    ||||||||    
T  11113655 tttcaaat 11113662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 43422864 - 43422983
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||| |||| || ||| |||||  ||||||||| |||||||||||||||||| ||||| |||  || ||||||||||| |||| ||||||||    
T  43422864 cttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattcccaagttagtcctttaagtt 43422963  T
Q  243 tcaaatgtttcaaataggtc 262  Q
    ||||| ||||||||||||||    
T  43422964 tcaaaagtttcaaataggtc 43422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 43423226 - 43423100
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||||||||||||||| ||| || |||||  |||||||||||||||||||||||| ||| ||||||||| | ||||||| ||| | | ||     
T  43423226 ttttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtc-ttttagtttcatagaattctcaatttactcc 43423128  T
Q  235 tttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||||||| ||||||||||||||    
T  43423127 tttaagtttcaaaagtttcaaataggtc 43423100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 301
Target Start/End: Complemental strand, 31169609 - 31169452
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || || ||| |||||  |||||||||  |||||||||| ||| |||||||||||||||  ||||| ||| | |||| |||||||||    
T  31169609 ttttagtttgacaaaattctcaagttagtcctttaagtttt-aaagtttcaaatagatcattttagtttgacgaaattctcaaattagtcctttaagttt 31169511  T
Q  244 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
     ||| |||||||||| ||| ||||| |||||||| |||||||||||||||| |||||||    
T  31169510 taaaagtttcaaatatgtcattttagttgataaaatatttcaccgttacccgtgatgtc 31169452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 256
Target Start/End: Complemental strand, 36360210 - 36360088
Alignment:
Q  134 attttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtc 233  Q
    ||||| ||| ||||||||||||| || | |||| ||||| |||||||||||||||||||||| || ||| ||||| ||||||| |||| |||||| ||||    
T  36360210 attttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaattgccaagttagtc 36360111  T
Q  234 atttaagtttcaaatgtttcaaa 256  Q
     ||||||||||||| ||||||||    
T  36360110 ctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 9770565 - 9770672
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    ||||| ||| |||||| || |||||| ||| |  |||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||| |||||||||||    
T  9770565 tccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttagtcatttaag 9770664  T
Q  241 tttcaaat 248  Q
    ||||||||    
T  9770665 tttcaaat 9770672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 13771937 - 13771843
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 292  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||||| ||| ||||| ||||||||| ||||||| ||||||    
T  13771937 ggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttcactgttacc 13771843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 296
Target Start/End: Complemental strand, 23553994 - 23553840
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||||| || ||  || ||||| |||||||||||||| |||| ||||| ||||||||||||||| ||||||| ||||| |||   | |||||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  243 tcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    ||||| ||||||||||| || | ||| || ||||| |||||||| ||||||||||    
T  23553894 tcaaaagtttcaaatagatcatgttagttaataaattatttcactgttacccctg 23553840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 292
Target Start/End: Complemental strand, 8714482 - 8714330
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||| | || | |||| |||||  |||||| ||| |||||||||| ||| |  ||||||||||| ||||||| ||||| |||  ||||||    
T  8714482 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 8714383  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 292  Q
    |||| || |||| ||||||||| ||||| ||||||||||||||||| ||||||    
T  8714382 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 8714330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 40553433 - 40553313
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||||||||||||||| ||| || |||||  ||| |||||  ||||||||||| ||||| ||||||||||||| |||| | |||| ||||     
T  40553433 ttttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtct 40553334  T
Q  235 tttaagtttcaaatgtttcaa 255  Q
    ||||||||||||| |||||||    
T  40553333 tttaagtttcaaaagtttcaa 40553313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 247
Target Start/End: Complemental strand, 41190397 - 41190293
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||||| || || ||| |||||  ||||| |||||||| ||||||||||||||||||||||||| ||||||| |||   |||||||||||||    
T  41190397 cttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagtt 41190298  T
Q  243 tcaaa 247  Q
    |||||    
T  41190297 tcaaa 41190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 4613778 - 4613900
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgat 273  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||| ||||  | ||| |||| ||||||||||||| |||||||||||  ||||||| || ||    
T  4613778 tttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagtttat 4613877  T
Q  274 aaactatttcaccgttacccctg 296  Q
    |||||||||||||| || |||||    
T  4613878 aaactatttcaccgctaaccctg 4613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 14871482 - 14871368
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttag-tttgacagaattcccaagtcagtc 233  Q
    |||| ||||||| ||||||||| || ||| || ||||| ||||||||||||||||||||||||||||  |||||| ||||||| ||||| ||| | ||||    
T  14871482 ttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtc 14871383  T
Q  234 atttaagtttcaaat 248  Q
     ||||||||||||||    
T  14871382 ctttaagtttcaaat 14871368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 40552800 - 40552922
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgat 273  Q
    ||||| ||| |||||||||||||| |  |||||||||||||| ||||  ||||| || ||||||| |||||||  ||||||||||| ||||| |||||||    
T  40552800 tttaaattttgaaagtttcaattaagatattttagtttgacaaaattttcaagttagccatttaaatttcaaaaatttcaaataggttctttaaattgat 40552899  T
Q  274 aaactatttcaccgttacccctg 296  Q
    ||| |||||||| ||||||||||    
T  40552900 aaaatatttcactgttacccctg 40552922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 296
Target Start/End: Original strand, 13771425 - 13771518
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||| || ||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactatttcaccatttcccctg 13771518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 29792652 - 29792559
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 228  Q
    |||||||||||||||||||||| || |||||| |||||  ||||| ||||||||||||| ||||| || ||||||||||||| ||||| |||||    
T  29792652 ttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataattctcaagt 29792559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 5358650 - 5358754
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtcc 302  Q
    ||||||||||||||||||  ||||| |||| || |||||||||| |||| |||||||| |||||| ||||||||||||||| | |||||||||| ||||     
T  5358650 ttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcgctgttacccctgctgtca 5358749  T
Q  303 atctc 307  Q
    |||||    
T  5358750 atctc 5358754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 6236358 - 6236250
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||| ||| || |||||| ||| |  |||||||||| | ||||||||||||||| ||||| ||||||||| ||||||||| |||  |||||    
T  6236358 gtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtactttaa 6236259  T
Q  240 gtttcaaat 248  Q
    |||||||||    
T  6236258 gtttcaaat 6236250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 39700856 - 39700943
Alignment:
Q  168 ttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||  |||| |||| ||||||||| ||| |||||||    
T  39700856 ttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaa 39700943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 43422921 - 43423028
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||| |||  || || |||||| |||||  |||||||||| |||||||||| |||||||||||||||||||| |||| |||||| |||| |||||    
T  43422921 gtccttttattttagcaaaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtcctttaa 43423020  T
Q  240 gtttcaaa 247  Q
     |||||||    
T  43423021 atttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 45018053 - 45017934
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||||||||||||||||||||| ||    ||| |||||  |||||||||||||||||| ||||||||| ||||||||||||  || | |||||| ||||     
T  45018053 ttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgac--aagttccaagttagtcc 45017956  T
Q  235 tttaagtttcaaatgtttcaaa 256  Q
    |||||||||||||  |||||||    
T  45017955 tttaagtttcaaaaatttcaaa 45017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 36314781 - 36314697
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 219  Q
    |||| ||||||||||||||||| || |  ||| ||||| |||||| |||||||||||||||||| ||| ||||||||||||||||    
T  36314781 ttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgacagaa 36314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 35433899 - 35433994
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||| |||| |||||| || ||||| |||||||| |||||||| |||||||    
T  35433899 ggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgttaccc 35433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 35434400 - 35434313
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 285  Q
    |||| ||||||||||||| |||||| |||| | || ||||||||||||| |||||||||| ||| ||||| |||||||||||||||||    
T  35434400 ggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 36360205 - 36360138
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 266  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||| || |||||||||| |||||||    
T  36360205 ggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttt 36360138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 9770662 - 9770731
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 256  Q
    ||||||||| |||||| |||||||||||||||||||| |||| |||| |||||||||||||  |||||||    
T  9770662 aagtttcaaataggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 284
Target Start/End: Complemental strand, 16208815 - 16208674
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || || ||| |||||  |||||||||   |  |||||| ||| |||||||||||| | ||||||  ||||| |||| ||| |||||    
T  16208815 ttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttcaagttagtcctttgagttt 16208716  T
Q  244 caaatgtttcaaataggt-cttttaattgataaactatttca 284  Q
    |||| |||||||||| || |||||| ||||||||||||||||    
T  16208715 caaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 34686968 - 34686875
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 291  Q
    |||| ||||| ||||||||||||  ||||| |||| ||||| ||| ||| |||| ||||||||| ||||| |||||||||||||||||||||||    
T  34686968 ggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 43423127 - 43423074
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 228  Q
    |||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  43423127 tttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagt 43423074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 6235793 - 6235895
Alignment:
Q  201 tcattttagtttgacagaattcc-caagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcaccgttacccctgat 298  Q
    |||||||||||||||||||||||  |||| | || ||||| ||||||| |||||||||||  | ||||| |||||||||||||||||| ||||| ||| |    
T  6235793 tcattttagtttgacagaattccgaaagttaatcctttaaatttcaaaagtttcaaatagactattttagttgataaactatttcacctttacctctgct 6235892  T
Q  299 gtc 301  Q
    |||    
T  6235893 gtc 6235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 9277112 - 9277058
Alignment:
Q  201 tcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    |||||||||||||||||||||||||||| |||| |||||||||| || |||||||    
T  9277112 tcattttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaa 9277058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 13771941 - 13771868
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 208  Q
    |||| ||| |||||||||||||||| |||||| |||||  |||||||||| |||||||||| || |||||||||    
T  13771941 ttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcatttta 13771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 35434404 - 35434328
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||| |||||||||||||||||||| ||| || ||| |  |||||||||| |||||||||| || ||||||||||||    
T  35434404 ttttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagtt 35434328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 23179049 - 23179096
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 246  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  23179049 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 23553418 - 23553489
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||| || || ||| || || |||||| |||| |||||||||| |||||||||||||||    
T  23553418 gtccttttagtttgacaaaattctcaagttggtcttttaaatttcaaaagtttcaaataggtcattttagtt 23553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 30576729 - 30576658
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||| || || ||||||||||||    
T  30576729 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatatgtcattttagtt 30576658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 36359903 - 36359970
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 266  Q
    |||| |||||||||||||||||| |||||| |||| |||||||||| || ||||||| ||||| ||||    
T  36359903 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttt 36359970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 44040860 - 44040922
Alignment:
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||| |||||    
T  44040860 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttatccctg 44040922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 29030252 - 29030175
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagttt 212  Q
    |||| ||| |||||||||||||||| |||  | ||| |  |||||||||||||||||||||||| ||| |||||||||    
T  29030252 ttttggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagttt 29030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 44040808 - 44040896
Alignment:
Q  122 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||| |||||||| ||||||||||||| ||| || |  ||| ||||  ||||||||||| ||||||| || |||||||||||||||    
T  44040808 aggtcaaatatcattttggtccttttagtttaacagaatttacaaattagc-ttttaagtttcaaaagttttaaataggtcattttagtt 44040896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 25737106 - 25737166
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 259  Q
    |||| ||||||||||||| ||||  ||||| |||| ||||||||||||| |||||||||||    
T  25737106 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatag 25737166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 31169614 - 31169555
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 259  Q
    |||||||||||||||||| ||||| ||||| |||| ||||||||| ||| |||||||||||    
T  31169614 ggtcattttagtttgacaaaattctcaagttagtcctttaagttttaaa-gtttcaaatag 31169555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 39701523 - 39701467
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    |||| ||||||||||||||||||| ||||| |||  ||||||||||||| |||||||    
T  39701523 ggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaa 39701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 43423222 - 43423154
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttta 267  Q
    |||| ||||||||||||| |||||| |||| ||| ||||||||||| || ||||||| || ||||||||    
T  43423222 ggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtctttta 43423154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 14871478 - 14871416
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 261  Q
    |||| ||| |||||||||||||||| |||| |||| |||||||||| || ||||||| |||||    
T  14871478 ggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggt 14871416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 9770575 - 9770619
Alignment:
Q  211 ttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    |||||||||||||||||| | ||||||||||||| || |||||||    
T  9770575 ttgacagaattcccaagttaatcatttaagtttcgaaagtttcaa 9770619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 39701463 - 39701391
Alignment:
Q  139 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||| | || |||||  |||||  |||||||||| ||| |||||| |||||| ||||||||    
T  39701463 agtccttttagtttgatagaattcccagattagtcatttaagtttcaaaactttcaaataggtccttttagtt 39701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 135 - 301
Target Start/End: Complemental strand, 36196627 - 36196462
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||||||||||||  | |  ||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  36196627 ttttggtccttttagtttgaca--attttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtca 36196530  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  36196529 tttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 36196462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 301
Target Start/End: Complemental strand, 27893686 - 27893519
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || || ||| |||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||     
T  27893686 ttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtcc 27893587  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||| ||||| ||||    
T  27893586 tttaagtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgttaaccctgttgtc 27893519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 293
Target Start/End: Complemental strand, 31264301 - 31264125
Alignment:
Q  121 taggtcaaaaatcattttag-tccttttagtttgacataactcccaattta--gtattttaagtttcgaaagtttcaattaggtcattttagtttgacag 217  Q
    ||||||||| |||| ||| | |||||||||||||||| || | |||| |||  ||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  31264301 taggtcaaatatcacttttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacag 31264202  T
Q  218 aattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 293  Q
    |||| |||||| ||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||    
T  31264201 aatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtcaccc 31264125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 19080667 - 19080784
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgat 273  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||| |||||| |||||| |||||| |||||    
T  19080667 tttaagttttgaaagtttcaattaggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagttgat 19080766  T
Q  274 aaactatttcaccgttac 291  Q
    ||||||||||||||||||    
T  19080767 aaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 286
Target Start/End: Original strand, 34336039 - 34336185
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||| | || |  ||| |||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  34336039 tccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaattcccaagttagtcctttaag 34336138  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 286  Q
    ||||||| |||| ||||||||| ||||| || |||||||||||||||    
T  34336139 tttcaaaagttttaaataggtctttttagttaataaactatttcacc 34336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 126 - 259
Target Start/End: Original strand, 30907063 - 30907196
Alignment:
Q  126 caaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattccca 225  Q
    |||| |||||||| |  |||||||||||||| || || ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  30907063 caaatatcatttttggtcttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctca 30907162  T
Q  226 agtcagtcatttaagtttcaaatgtttcaaatag 259  Q
    ||| |||| ||||||||||||| |||||||||||    
T  30907163 agttagtcctttaagtttcaaaagtttcaaatag 30907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 261
Target Start/End: Original strand, 31263923 - 31264049
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| ||||||||||||| || | |||| ||| |  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||     
T  31263923 ttttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcc 31264022  T
Q  235 tttaagtttcaaatgtttcaaataggt 261  Q
    ||||||||||||| |||||||||||||    
T  31264023 tttaagtttcaaaagtttcaaataggt 31264049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 30907137 - 30907253
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||||||||| || ||| |||||  |||||||||| |||||||||| ||| || |||||| |||||| ||||||||||| ||||||||||    
T  30907137 gtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcatttaa 30907236  T
Q  240 gtttcaaatgtttcaaa 256  Q
    |||||||| ||||||||    
T  30907237 gtttcaaaagtttcaaa 30907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 288
Target Start/End: Complemental strand, 30907440 - 30907288
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta-gtttgacagaattcccaagtcagtc 233  Q
    ||||| |||||||||||||||| || |   || |||||  |||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||| ||||    
T  30907440 ttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctcaagttagtc 30907341  T
Q  234 atttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgt 288  Q
     ||||||||||||| |||||||||| ||| ||||  ||||||| |||||| ||||    
T  30907340 ctttaagtttcaaaagtttcaaataagtcattta--tgataaattatttcgccgt 30907288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 37542956 - 37543057
Alignment:
Q  145 tttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttc 244  Q
    |||||||||||| |||| | || ||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||| |||||| |||| ||||||||||    
T  37542956 tttagtttgacagaacttc-aagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaagtttc 37543054  T
Q  245 aaa 247  Q
    |||    
T  37543055 aaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 39376491 - 39376401
Alignment:
Q  176 ttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 266  Q
    |||||||||||||||||  |||||||| |||||  ||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||    
T  39376491 ttaagtttcgaaagttttgattaggtctttttaaattgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttt 39376401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 176 - 296
Target Start/End: Complemental strand, 11871835 - 11871714
Alignment:
Q  176 ttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgata 274  Q
    |||||||| |||| ||||||||| ||| | ||||||||||||||||| | ||| |||| ||||||||||||| |||| ||||| ||| ||||| ||||||    
T  11871835 ttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgata 11871736  T
Q  275 aactatttcaccgttacccctg 296  Q
    || ||||| |||||||||||||    
T  11871735 aattatttaaccgttacccctg 11871714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 27893038 - 27893146
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| ||| |  ||||| ||||||||||||||||||  || |||||||||||||| |||||||||| |||| |||||    
T  27893038 gtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattcccaagttagtcctttaa 27893137  T
Q  240 gtttcaaat 248  Q
    |||||||||    
T  27893138 gtttcaaat 27893146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 259
Target Start/End: Original strand, 8260392 - 8260507
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||| ||| || || ||| |||||  ||||||||||||||||||||||||| |||||||||||||||||| ||| ||| | | || ||||| |||    
T  8260392 ttttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaatttt 8260491  T
Q  244 caaatgtttcaaatag 259  Q
    |||| |||||||||||    
T  8260492 caaaagtttcaaatag 8260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 20535509 - 20535608
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaa-gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||| ||| ||||  ||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||    
T  20535509 ttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactatttcaccgttatccctgctgtc 20535608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 34336419 - 34336276
Alignment:
Q  116 tattttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttga 214  Q
    |||||||||||||| |||| |||| ||||||||||||||||| || || ||| |||||  ||||| |||||||||||||| ||| ||| ||||| |||||    
T  34336419 tattttaggtcaaatatcacttttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttga 34336320  T
Q  215 cagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 258  Q
    || ||||| ||| | |||  ||||| ||||||| ||||||||||    
T  34336319 caaaattctcaaattagttctttaaatttcaaaagtttcaaata 34336276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 16781175 - 16781049
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtc 233  Q
    |||| ||| ||||||||||||| || || ||| |||||  |||||||||| |||||||| ||||||||| ||||||||||||| ||||| ||||| ||||    
T  16781175 ttttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtc 16781076  T
Q  234 atttaagtttcaaatgtttcaaatagg 260  Q
     ||||| ||||||| ||||||| ||||    
T  16781075 ctttaaatttcaaaagtttcaattagg 16781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 15506040 - 15506145
Alignment:
Q  191 ttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 289  Q
    |||||||||||| ||||||||||||| ||||| ||| | | || ||||||||| ||| |||| ||| ||||| |||||||||||||||||||||||||||    
T  15506040 ttcaattaggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtt 15506139  T
Q  290 acccct 295  Q
    | ||||    
T  15506140 aaccct 15506145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 31263988 - 31264095
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| |||||  |||||||||| |||||||||| |||||  ||||  ||||||||||||||||||| |||  |||||    
T  31263988 gtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtactttaa 31264087  T
Q  240 gtttcaaa 247  Q
    ||||||||    
T  31264088 gtttcaaa 31264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 34429684 - 34429791
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| |||||  ||||| |||||||| ||||||||||||| ||||| ||||| |||||| |||||| | || |||||    
T  34429684 gtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctttaa 34429783  T
Q  240 gtttcaaa 247  Q
    ||||||||    
T  34429784 gtttcaaa 34429791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 248
Target Start/End: Complemental strand, 41265364 - 41265257
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||| | || |  ||| |||||  |||||||||||||||||||||||| ||| | ||| ||||||||||||| ||||| |||| ||||||    
T  41265364 tccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcctttaag 41265265  T
Q  241 tttcaaat 248  Q
    ||||||||    
T  41265264 tttcaaat 41265257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 294
Target Start/End: Complemental strand, 42117268 - 42117172
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccc 294  Q
    |||| |||||||||| ||||| | | |||| |||| ||||||||||||| |||| |||||||| |||||| ||||||||| ||||||||||||||||    
T  42117268 ggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 42117172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 19081124 - 19081055
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttg 213  Q
    ||||||||||||| || || ||| ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 20536039 - 20535966
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    |||||||| ||||||||| |||||  |||||||||||||||| ||||| ||||| |||| ||||||||||||||    
T  20536039 tttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaagtttcaaat 20535966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 37543197 - 37543100
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||| || |  ||| ||||| |||||||||| |||||||||||||| ||| ||||||||||||| |||| |||||  |||| ||||||    
T  37543197 cttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatttccaaggtagtcctttaag 37543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 34336335 - 34336227
Alignment:
Q  139 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcattta 238  Q
    |||||||||| ||||||| || || ||| |||||  ||||| |||| |||||||||| || ||| || |||||||||||||||  ||||| | || ||||    
T  34336335 agtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatctttta 34336236  T
Q  239 agtttcaaa 247  Q
    |||||||||    
T  34336235 agtttcaaa 34336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 30907081 - 30907139
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||||||||||||| ||||| |||| |||||||||| || ||||||| ||||||    
T  30907081 ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtc 30907139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 37543048 - 37543089
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagt 228  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  37543048 aagtttcaaacaggtcattttagtttgacagaattcccaagt 37543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 31263927 - 31263990
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||| |||||||||||||||||| |||||| | || |||||||||| || ||||||| ||||||    
T  31263927 ggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtc 31263990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 19081124 - 19081062
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 266  Q
    ||||||||||||||||||| ||| | |||| |||||||||| || ||||||| ||||| ||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttt 19081062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 5116895 - 5116956
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    |||||||||||||||| ||||||||||||| ||||   || | |||| ||||||||||||||    
T  5116895 aagtttcaattaggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaat 5116956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 27893138 - 27893191
Alignment:
Q  249 gtttcaaataggtcttttaa-ttgataaactatttcaccgttacccctgatgtc 301  Q
    |||||||||||||||||| | |||||||||||||||| ||||||| ||| ||||    
T  27893138 gtttcaaataggtctttttagttgataaactatttcaacgttacctctgctgtc 27893191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 39376172 - 39376284
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| ||||||||| |||||| || ||| || ||  || |||||| ||||||||||| ||| || ||||||||| || ||||||| |||| ||||     
T  39376172 tttttgtcattttagtttaacataattctcaagttggtccttcaagttttgaaagtttcaactagatccttttagttttacggaattcctaagttagtc- 39376270  T
Q  235 tttaagtttcaaat 248  Q
    ||||| ||||||||    
T  39376271 tttaaatttcaaat 39376284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 5116946 - 5117006
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 247  Q
    ||||||||| || ||||||||||||||||| ||||| ||||| | || ||||| |||||||    
T  5116946 aagtttcaaataagtcattttagtttgacaaaattcacaagttactcctttaactttcaaa 5117006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 34429683 - 34429755
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 270  Q
    |||| ||||||||||||||||||| ||||| |||| ||||| |||| ||  |||||| ||||| |||||||||    
T  34429683 ggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatt 34429755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 10862708 - 10862545
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca-ttta 238  Q
    ||||||||||||||||| || || ||| |||||  ||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||| ||||| ||||    
T  10862708 gtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcatttta 10862609  T
Q  239 agtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    | ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  10862608 aatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgctgtc 10862545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 288
Target Start/End: Complemental strand, 32417829 - 32417684
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||| ||| || |||||| |||||  ||||| |||||||||||||||||||||| ||| ||||||||| |||| | |||| ||||||||||||||    
T  32417829 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32417730  T
Q  244 caaatgtttcaaataggt-cttttaattgataaactatttcaccgt 288  Q
    || | ||||||||||||| |||||| ||||||||||||||||||||    
T  32417729 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32417684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 288
Target Start/End: Complemental strand, 32423670 - 32423525
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||| ||| || |||||| |||||  ||||| |||||||||||||||||||||| ||| ||||||||| |||| | |||| ||||||||||||||    
T  32423670 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32423571  T
Q  244 caaatgtttcaaataggt-cttttaattgataaactatttcaccgt 288  Q
    || | ||||||||||||| |||||| ||||||||||||||||||||    
T  32423570 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32423525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 301
Target Start/End: Original strand, 11527535 - 11527693
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||| |||||||||| ||| || |||||  |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||     
T  11527535 ttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcacaagttagtcc 11527634  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||         |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  11527635 tttaa---------gtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 11527693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 144 - 266
Target Start/End: Complemental strand, 16168807 - 16168685
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || | |||| |||||  ||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||  ||| ||||    
T  16168807 ttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctcaagttagtctattacgttt 16168708  T
Q  244 caaatgtttcaaataggtctttt 266  Q
    |||| ||||||||||||||||||    
T  16168707 caaaagtttcaaataggtctttt 16168685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 17180224 - 17180102
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    |||||||||||||||||| ||||| ||| ||||||||||||| ||||  ||||| |||| ||||||||| ||| ||||||||||| || ||||| |||||    
T  17180224 tttaagtttcgaaagttttaattatgtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagttgat 17180125  T
Q  274 aaactatttcaccgttacccctg 296  Q
    |||||||||||||||||||||||    
T  17180124 aaactatttcaccgttacccctg 17180102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 20575416 - 20575559
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||| | || | |||| |||||  |||||||||||||||||| || |||||| ||||||||||| |||||| |||||| |||| |||||    
T  20575416 gtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatttccaagttagtcctttaa 20575515  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactattt 282  Q
    |||| ||| |||||||||||||| ||| | ||||||||||||||    
T  20575516 gttttaaaagtttcaaataggtcatttcagttgataaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 16168464 - 16168577
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||| | || || ||  |||||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||     
T  16168464 ttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatttccaagttagtcc 16168563  T
Q  235 tttaagtttcaaat 248  Q
    ||||||||||||||    
T  16168564 tttaagtttcaaat 16168577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 32417468 - 32417591
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||| |||||    
T  32417468 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32417567  T
Q  235 tttaagtttcaaatgtttcaaata 258  Q
    ||||||||||||| |||| |||||    
T  32417568 tttaagtttcaaaagttttaaata 32417591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 32423309 - 32423432
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||| |||||    
T  32423309 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32423408  T
Q  235 tttaagtttcaaatgtttcaaata 258  Q
    ||||||||||||| |||| |||||    
T  32423409 tttaagtttcaaaagttttaaata 32423432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 301
Target Start/End: Complemental strand, 24139626 - 24139466
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    ||||||||||| ||||||| || ||| |||||  |||||||||||||||||| ||||| ||| ||||||||||| ||||||  || || |||| ||||||    
T  24139626 tccttttagtt-gacataattcacaaattagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaattatcaggttagtcctttaag 24139528  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||||  ||||||||| ||| ||||| |||||||| |||||||| || ||||||| ||||    
T  24139527 tttcaaaaatttcaaataagtctttttagttgataaattatttcactgtaacccctgttgtc 24139466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 9902404 - 9902277
Alignment:
Q  122 aggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaat 220  Q
    |||||||| |||||||| | | |||||||||||||| || |  ||| ||||| ||||||||||||||||||| ||||| ||| ||||||||||||| |||    
T  9902404 aggtcaaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataat 9902305  T
Q  221 tcccaagtcagtcatttaagtttcaaat 248  Q
    |||| ||| |||  ||||||||||||||    
T  9902304 tcccgagttagttctttaagtttcaaat 9902277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 16168751 - 16168644
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| ||||| | ||| ||||| |||||||||| |||||| |||||||||||| ||| |||||||| |||| |||||    
T  16168751 gtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtcttttaa 16168652  T
Q  240 gtttcaaa 247  Q
    ||||||||    
T  16168651 gtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 293
Target Start/End: Original strand, 10962746 - 10962896
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || ||| || ||| | | | |||||||||||||||||||||| || ||||| ||| | |||||| | || | |||| |||||||||    
T  10962746 ttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatttctaaattagtcctttaagttt 10962845  T
Q  244 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
     ||| |||||||||| ||| ||||| |||||||||||||| ||||||||||    
T  10962846 taaaagtttcaaatatgtcattttagttgataaactattttaccgttaccc 10962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 257
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 257  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 2839624 - 2839737
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||| ||||| | || || ||| |||||  |||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||     
T  2839624 ttttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcc 2839723  T
Q  235 tttaagtttcaaat 248  Q
    ||||| ||||||||    
T  2839724 tttaaatttcaaat 2839737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 2840172 - 2840064
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||| |||||| || ||| |||||  |||||||||| |||||||| | ||| || ||||||||| ||||||||| ||||| | ||||||||    
T  2840172 gtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctcaagttaatcatttaa 2840073  T
Q  240 gtttcaaat 248  Q
    |||||||||    
T  2840072 gtttcaaat 2840064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 17179662 - 17179790
Alignment:
Q  174 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattga 272  Q
    ||||||||||||||| ||| |||||||||  |||||||||| ||||||  ||||| |||| ||||| |||||||  |||||||||||| |||||| ||||    
T  17179662 ttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagttga 17179761  T
Q  273 taaactatttcaccgttacccctgatgtc 301  Q
    |||   ||||||||||||| |||| ||||    
T  17179762 taagtcatttcaccgttactcctgctgtc 17179790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 301
Target Start/End: Complemental strand, 9946818 - 9946672
Alignment:
Q  147 tagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 246  Q
    ||||||||||||| | | || |||||  ||||| | |||||||||||||||||||||||||||||||||| |||| |||| | |||| |||||           
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtcctttaa------- 9946726  T
Q  247 atgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
       ||||||| |||| |||||| |||||||||||||||||||||||||||| ||||    
T  9946725 --atttcaaagaggtccttttagttgataaactatttcaccgttacccctgctgtc 9946672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 301
Target Start/End: Complemental strand, 28630742 - 28630584
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||||||||||||||| ||| || ||||| |||||||||| |||||||||||||||  |  |||||||||  |||||||| |||| |||      
T  28630742 ttttggtccttttagtttgacataattcctaagttagttttttaagttttgaaagtttcaattagacccatttagtttggtagaattcctaagttagtac 28630643  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||         | ||||||||||| |||||| |||||||||||||||||| ||||||||| ||||    
T  28630642 tttaa---------gcttcaaataggtccttttagttgataaactatttcacctttacccctgttgtc 28630584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 9901962 - 9902060
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    |||| |||||||||| ||||||| |||||| |||  ||| ||||||||| |||| ||||||||| ||||| |||||||||||||||| |||||||||||    
T  9901962 ggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttcatcgttacccctg 9902060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 20575763 - 20575660
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||||||| || || ||| ||||||||||||| ||||||||||| |||| || |||||    
T  20575763 cttttagtttgacagaattctcaagttagt-ttttaagtttcgaaagttttaaataagtccttttagtttgacaaaattcccaagttagtc-ttcaagtt 20575666  T
Q  243 tcaaat 248  Q
    ||||||    
T  20575665 tcaaat 20575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 11528130 - 11528013
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    |||||||||  |||||||||| ||  |  ||||||||||||| || |||||| | | || ||||||||||||| |||||||||| ||| ||||| |||||    
T  11528130 tttaagtttaaaaagtttcaaatatattcttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgat 11528031  T
Q  274 aaactatttcaccgttac 291  Q
    |||||||||||| |||||    
T  11528030 aaactatttcactgttac 11528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 32417537 - 32417640
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || |  ||| |||||  |||||||||| ||||||| || || ||| |||||||||||||||||| |||| | |||| |||||||||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32417636  T
Q  244 caaa 247  Q
    ||||    
T  32417637 caaa 32417640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 32423378 - 32423481
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || |  ||| |||||  |||||||||| ||||||| || || ||| |||||||||||||||||| |||| | |||| |||||||||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32423477  T
Q  244 caaa 247  Q
    ||||    
T  32423478 caaa 32423481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 296
Target Start/End: Original strand, 10407317 - 10407410
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||||||| |||||| | || | |  ||||||||||||| |||||||||| ||| ||||| |||||||| |||||||| ||||||||||    
T  10407317 ttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgttacccctg 10407410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 11528102 - 11528034
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||| |||||| ||| |  |||||||||| |||||||||| || ||||||||||||    
T  11528102 cttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagtt 11528034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 9901939 - 9902034
Alignment:
Q  116 tattttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||| |||| || ||||| |||||||||||||| || || | |||| |||||  ||| |||||| ||||||| || |||||||||||||||    
T  9901939 tattttaggccaaatataattttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagtt 9902034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 10407799 - 10407709
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttc-aaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 292  Q
    ||||||||| || |||||| ||||| ||||||| ||||||  ||| |||||||||| ||| ||||| ||||||||||||||||| ||||||    
T  10407799 ttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttcactgttacc 10407709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 10407307 - 10407384
Alignment:
Q  134 attttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||||||||| || ||| |  ||| |  |||||||||| |||||||||| || ||||||||||||    
T  10407307 attttagtccttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagtt 10407384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 2839628 - 2839700
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 270  Q
    |||| ||||| ||||| ||||||| ||||| |||| ||||||||||||| ||||||| ||||| |||||||||    
T  2839628 ggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatt 2839700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 2840173 - 2840113
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 259  Q
    |||| ||||||||| ||| ||||| ||||| |||||||||||||||||| ||||| |||||    
T  2840173 ggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatag 2840113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 296
Target Start/End: Complemental strand, 17132265 - 17132178
Alignment:
Q  210 tttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||||||| ||||| | || ||||||||||||| | |||||||| ||| | ||| || ||||||||||| |||||||| ||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaataagtcatattagtttataaactattttaccgttactcctg 17132178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 17180199 - 17180128
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| |||||||||||    
T  17180199 gtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagtt 17180128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 20575415 - 20575478
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||| ||||||||||| |||||| |||||| |||| |||||||||| || |||| |||||||||    
T  20575415 ggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtc 20575478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 20575657 - 20575602
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 195  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||    
T  20575657 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 20575602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 10862709 - 10862665
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    |||| ||||||||||||||||||| ||||| |||| |||||||||    
T  10862709 ggtccttttagtttgacagaattctcaagttagtcctttaagttt 10862665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 293
Target Start/End: Complemental strand, 48352867 - 48352708
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |||| | ||||| |||||||||||||||| ||||||||||||  |||||||||||| ||||||||||| ||||     
T  48352867 ttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattcccaagttagtcc 48352768  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  48352767 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 48352708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 144 - 301
Target Start/End: Original strand, 27351059 - 27351217
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||| ||||||| || || ||| |||||  |||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| |||| |||||||||    
T  27351059 ttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctcaagttagtcctttaagttt 27351158  T
Q  244 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||| || ||||||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  27351159 caaaagtatcaaataagtcattttagttgataaactatttcaccgttacccctgctgtc 27351217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 121 - 258
Target Start/End: Complemental strand, 29419189 - 29419051
Alignment:
Q  121 taggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 219  Q
    ||||||||| |||| |||| |||||||||||||||||||| | |||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  29419189 taggtcaaatatcacttttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaa 29419090  T
Q  220 ttcccaagtcagtcatttaagtttcaaatgtttcaaata 258  Q
    |||| || | |||| ||||||||||||| ||||||||||    
T  29419089 ttccaaaattagtcttttaagtttcaaaagtttcaaata 29419051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 293
Target Start/End: Complemental strand, 10686839 - 10686680
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| | ||||||| ||||| ||  ||||||||| ||||| |||||    
T  10686839 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtca 10686740  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    ||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  10686739 tttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 10686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 301
Target Start/End: Original strand, 8902803 - 8902927
Alignment:
Q  178 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaa 276  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||| || |||||| ||||||||    
T  8902803 aagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagttgataaa 8902902  T
Q  277 ctatttcaccgttacccctgatgtc 301  Q
     |||||||| |||||||||| ||||    
T  8902903 ttatttcactgttacccctgttgtc 8902927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 301
Target Start/End: Original strand, 34254504 - 34254665
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || || ||| || ||  |||||| ||| ||||||| || ||| || |||||||||||||||||||| ||||||||| ||||||    
T  34254504 tccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaattcctaagtcagtcctttaag 34254603  T
Q  241 tttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||| ||||||||||  | |||||| | ||||||||||||||| |||||||||| ||||    
T  34254604 tttcaaaagtttcaaatatatgcttttagtcgataaactatttcactgttacccctgttgtc 34254665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 44964192 - 44964072
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    ||||||||||| |||| || || ||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| | || ||||||    
T  44964192 tccttttagttagacaaaattctcaagttagtcttt-aagtttcgaaagtttcaattagatcattttagtttgacagaattctcaagttattcctttaag 44964094  T
Q  241 tttcaaatgtttcaaataggtc 262  Q
    ||| ||| ||||||||||||||    
T  44964093 ttttaaaagtttcaaataggtc 44964072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 288
Target Start/End: Original strand, 1765693 - 1765846
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    ||||||||||||||||||||   || ||| || ||||| ||||||||||||||| ||| ||| ||||||| ||||||||||| |||| | || | ||||     
T  1765693 ttttagtccttttagtttgaacgaattcctaagttagt-ttttaagtttcgaaaattttaatcaggtcatgttagtttgacataatttctaaattagtcc 1765791  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 288  Q
    ||||||||||||| |||| |||||| | |||||| ||||||||||||||||||||    
T  1765792 tttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgt 1765846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 140 - 295
Target Start/End: Original strand, 10685852 - 10685999
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || |  ||| |||||  ||||||||||||| |||||||||| ||| |||||||||||||||||| |||||| |||| |||||    
T  10685852 gtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtcctttaa 10685951  T
Q  240 gtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccct 295  Q
    ||||||||| | |||        ||||| |||||||||||||| ||||||||||||    
T  10685952 gtttcaaatatgtca--------ttttagttgataaactattttaccgttacccct 10685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 11897841 - 11897947
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| ||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||     
T  11897841 ttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattcccaagttaatcc 11897940  T
Q  235 tttaagt 241  Q
    |||||||    
T  11897941 tttaagt 11897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 258
Target Start/End: Complemental strand, 17898992 - 17898850
Alignment:
Q  117 attttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgac 215  Q
    ||||||||||||| | || |||| |||||||||||||||||| | || ||| |||||  |||||||||  ||| ||||||||||||| |||||||||||     
T  17898992 attttaggtcaaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgat 17898893  T
Q  216 agaattcccaagtcagtcatttaagtttcaaatgtttcaaata 258  Q
    ||||||| ||| | |||| ||||||||||||| ||||||||||    
T  17898892 agaattcacaaattagtcctttaagtttcaaaagtttcaaata 17898850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 288
Target Start/End: Original strand, 44963878 - 44963992
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt-aattgat 273  Q
    |||||||||||||||||||||| | ||| ||||||||||| || |||||||| | |||| ||||||||||||| |||| |||||  |||||| | |||||    
T  44963878 tttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaatatatcttttcagttgat 44963977  T
Q  274 aaactatttcaccgt 288  Q
    |||||||||||||||    
T  44963978 aaactatttcaccgt 44963992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 49650578 - 49650686
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaa 239  Q
    ||||||||||||||||||| || ||| |||||  ||||| ||| |||| ||||||||||||| ||||||||||||||||||| ||||| ||| | |||||    
T  49650578 tccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtccttttaa 49650677  T
Q  240 gtttcaaat 248  Q
    |||||||||    
T  49650678 gtttcaaat 49650686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 1766044 - 1765930
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||| ||||||| || || ||| ||||| |||||| |||| ||||||| ||||| |||||||||||||||||||| || || || |||| |||||| ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  244 caaatgtttcaaata 258  Q
    |||| ||||||||||    
T  1765944 caaaagtttcaaata 1765930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 17898908 - 17898794
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||| | || || ||| |||||  |||||||||| |||||||||| || ||||||||||||||||||||||  ||| | |||| |||||    
T  17898908 gtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtcctttaa 17898809  T
Q  240 gtttcaaatgtttca 254  Q
     ||||||| ||||||    
T  17898808 atttcaaaagtttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 49651083 - 49651013
Alignment:
Q  178 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  49651083 aagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagtttcaaat 49651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 4772723 - 4772612
Alignment:
Q  174 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgat 273  Q
    |||||||||| |||| ||| |||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||     ||||   ||||||| |||||    
T  4772723 ttttaagttttgaaatttttaattgggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaat-----aaat---tcttttagttgat 4772632  T
Q  274 aaactatttcaccgttaccc 293  Q
    ||||||||||| ||||||||    
T  4772631 aaactatttcatcgttaccc 4772612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 27351660 - 27351547
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||| |||||||||| || ||| ||  || |||||||||||||||||| ||||| ||| ||||| ||||| ||||||| ||| | ||||     
T  27351660 ttttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgatagaattctcaaattagtcc 27351561  T
Q  235 tttaagtttcaaat 248  Q
    ||||||||||||||    
T  27351560 tttaagtttcaaat 27351547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 44964130 - 44964018
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || || ||| ||| |  |||||||||  |||||||||| |||||| ||||||||||||||||||| ||||| |||| ||||| |||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattt 44964031  T
Q  244 caaatgtttcaaa 256  Q
     ||| ||||||||    
T  44964030 taaaagtttcaaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 1765984 - 1765881
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || || ||  |||||  |||||| ||| |||||||||| || |||||||||||||||||||||| |||||| | || |||||||||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaagttt 1765885  T
Q  244 caaa 247  Q
    ||||    
T  1765884 caaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 11897845 - 11897908
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||| ||||||    
T  11897845 ggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtc 11897908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 39302339 - 39302427
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttac 291  Q
    ||||||||||||||||||| ||| | | |  ||||||||||||| ||||| | ||||| |||||| |||||||||||||||||||||||    
T  39302339 ttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttcaccgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 48352272 - 48352366
Alignment:
Q  211 ttgacagaattcccaagtcagtc----atttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||||||||||||||| ||||    ||||| |||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||    
T  48352272 ttgacagaattcccaagttagtccgtcatttaggtttaaaa-gtttcaaataggttcttttagttgataaactatttcaccgctacccctgctgtc 48352366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 4030342 - 4030390
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggt-cattttagtttgacagaattc 222  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  4030342 tttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 27351114 - 27351186
Alignment:
Q  139 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||||||| || ||| |||||  |||||||||| ||||| |||| || ||||||||||||    
T  27351114 agtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtatcaaataagtcattttagtt 27351186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 301
Target Start/End: Complemental strand, 8903340 - 8903237
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctga 297  Q
    |||| ||||||||||||| ||||| ||||| | || |||||||||| || ||||||||||  || ||||| ||| |||| |||||||| ||||||||||     
T  8903340 ggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcactgttacccctgt 8903241  T
Q  298 tgtc 301  Q
    ||||    
T  8903240 tgtc 8903237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 34255070 - 34254998
Alignment:
Q  188 agtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 261  Q
    ||||||||||||||   ||||||||||||||||| |||||| ||   ||||||||||||| |||||||||||||    
T  34255070 agtttcaattaggtatatttagtttgacagaatttccaagttag-attttaagtttcaaaagtttcaaataggt 34254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 2965499 - 2965583
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccg 287  Q
    |||||||||||| |||||  ||||| |  | ||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||    
T  2965499 ttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccg 2965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 8903344 - 8903268
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||| ||| |||||||||||||||| || ||| ||| |  ||||||||||||||||||||| ||  |||||||||||    
T  8903344 ttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagtt 8903268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 10685851 - 10685918
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 266  Q
    |||| ||||||||||||||||||  ||||| |||| |||||||||| || ||||||| || |||||||    
T  10685851 ggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttt 10685918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 4772171 - 4772223
Alignment:
Q  196 ttaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    ||||||| ||||||||||||| ||||| ||||  |||| ||||||||||||||    
T  4772171 ttaggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaat 4772223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 8902824 - 8902896
Alignment:
Q  139 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||| ||||||||||||| || |||||| |||||  |||||||||| ||||||| || || ||| ||||||||    
T  8902824 agtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 27351054 - 27351110
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    |||| ||||| ||||||||||||| ||||| |||| |||||||||| || |||||||    
T  27351054 ggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaa 27351110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 39302809 - 39302753
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    |||| ||||||||||||||||||| ||||| |||| ||||| ||| ||| |||||||    
T  39302809 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaa 39302753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 301
Target Start/End: Original strand, 35214811 - 35214973
Alignment:
Q  141 tccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||||| || | | || |||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||    
T  35214811 tccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcttttaa 35214910  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  35214911 gtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacccctgttgtc 35214973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 123 - 301
Target Start/End: Complemental strand, 1441571 - 1441400
Alignment:
Q  123 ggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 221  Q
    ||||||| |||| |||| |||||||||||||||||||| |||||| |||||  |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  1441571 ggtcaaatatcacttttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaatt 1441472  T
Q  222 cccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||| |||| ||||||||||         |||||||| |||||| ||||||||||||||||| |||||||||| ||||    
T  1441471 cccaagttagtcttttaagtttc---------aaataggtccttttagttgataaactatttcactgttacccctgctgtc 1441400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 19925455 - 19925311
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||||| || |||||| |||||  |||||||| ||||||||| |||||| || ||||||||||||||||||||||||| |||| ||||||||    
T  19925455 cttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattcccaagttagtcctttaagtt 19925356  T
Q  243 tcaaatgtttcaaataggt-cttttaattgataaactatttcacc 286  Q
    ||||| ||||||||||||| |||| | ||||||||||||||||||    
T  19925355 tcaaaagtttcaaataggtcctttcagttgataaactatttcacc 19925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 296
Target Start/End: Original strand, 5559111 - 5559270
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-cattt 237  Q
    ||||||||| ||||||| || |||||| |||||  ||||||||||| |||||||||| ||| || ||||||||||| | ||||||||||| ||| | |||    
T  5559111 gtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattcccaagttagtcctttt 5559210  T
Q  238 aagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 296  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  5559211 aagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctg 5559270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 31893257 - 31893362
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||||| || || ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  31893257 cttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcctaagttagtcttttaagtt 31893356  T
Q  243 tcaaat 248  Q
    ||||||    
T  31893357 tcaaat 31893362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 5805042 - 5805186
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  | || |||||    
T  5805042 gtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagctattcctttaa 5805141  T
Q  240 gtttcaaatgtttcaaataggt-cttttaattgataaactatttc 283  Q
    |||||||| |||| || ||||| |||||| |||||||||||||||    
T  5805142 gtttcaaaagttttaactaggtccttttagttgataaactatttc 5805186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 33879641 - 33879514
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||| |||||||||||| |||||| | ||     
T  33879641 ttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttccaagttaatcc 33879542  T
Q  235 tttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||||||| ||||||||||||||    
T  33879541 tttaagtttcaaaagtttcaaataggtc 33879514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 21433149 - 21433266
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || || ||| |||||  ||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  21433149 tccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcatttaag 21433248  T
Q  241 tttcaaatgtttcaaata 258  Q
    ||||||| ||||||||||    
T  21433249 tttcaaaagtttcaaata 21433266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 135 - 301
Target Start/End: Original strand, 1286369 - 1286534
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||| | || |  ||| ||||| |||||| |||| ||||||||||||||||| ||||||||||| |||||||  |||| ||||     
T  1286369 ttttcgtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtct 1286468  T
Q  235 tttaagtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||||| |||||||||||| ||||||| |||||||| ||  ||||||||||||||| ||||    
T  1286469 tttaagtttcaaaagtttcaaataggttcttttagttgataaatta--tcaccgttacccctgctgtc 1286534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 286
Target Start/End: Original strand, 23150643 - 23150790
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||||||||| || ||| |||||  ||||| ||| |||||||||||||| ||||||||| ||||||||||||| ||  | |||| |||||    
T  23150643 gtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaattctcagattagtcttttaa 23150742  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 286  Q
    |||||||| ||||||||||  || ||||| ||||||||||||||||||    
T  23150743 gtttcaaaagtttcaaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 27995065 - 27995227
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| ||||| ||||||||||| ||| ||| || ||| |||||||| ||||||||||||| ||||| | || |||||    
T  27995065 gtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaattctcaagttaatcctttaa 27995164  T
Q  240 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||||| || ||||||| ||  ||||| ||||||||||||||||| |||||||||| ||||    
T  27995165 gtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccctgctgtc 27995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 141 - 294
Target Start/End: Original strand, 28256498 - 28256652
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || |||||| ||| |  ||||| |||| ||||||| ||  || || ||||||||||||||||||| ||||| |||| |||||     
T  28256498 tccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctcaagttagtcctttaaa 28256597  T
Q  241 tttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccc 294  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  28256598 tttcaaaagtttcaaataggttcttttagttgataaactatttcactgttacccc 28256652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 144 - 301
Target Start/End: Original strand, 33235042 - 33235200
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || || ||| ||| |  ||||| |||  ||||||||||||||||| |||| |||||||||||||||||||| || | ||||| |||    
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaattt 33235141  T
Q  244 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||| |||||||| ||||| ||||| |||||||||||||||| ||||||||||| ||||    
T  33235142 caaaagtttcaaagaggtcattttagttgataaactatttcatcgttacccctgttgtc 33235200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 39959314 - 39959152
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || |   || |||||  ||||| |||  |||||||||| ||| |  |||||||||||||||||| |||||| | ||||||||    
T  39959314 gtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttccaagttaatcatttaa 39959215  T
Q  240 gtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||||||||| | ||||||||    
T  39959214 gtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgttaacgctgatgtc 39959152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 294
Target Start/End: Complemental strand, 1349269 - 1349114
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaa---gtcagtcatttaa 239  Q
    ||||||||||||||||| | | || ||||| ||||||||||| ||||||| || ||  ||||||||||||||||||||| ||||    | |||| |||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccc 294  Q
    |||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  1349169 gtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttacccc 1349114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 5559742 - 5559630
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |||||| |||||  |||||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  5559742 ttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttt-aaagtttcaattaggtccttttagtttgacagaattcccaagttagtcc 5559644  T
Q  235 tttaagtttcaaat 248  Q
    ||||||||||||||    
T  5559643 tttaagtttcaaat 5559630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 20366048 - 20366206
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||| ||| || || ||| |||||  |||||||||||||||||||||||| ||| ||||||||||||||||||| | ||||| ||     
T  20366048 ttttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaattctc-agtcaatcc 20366145  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccc 294  Q
     |||  ||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20366146 cttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttacccc 20366206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 34951266 - 34951377
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||  |||| |||| ||||||||||||| |||||||||| ||| ||||| |||||    
T  34951266 tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagttgat 34951365  T
Q  274 aaactatttcac 285  Q
    ||||||||||||    
T  34951366 aaactatttcac 34951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 296
Target Start/End: Original strand, 10619851 - 10619961
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcac 285  Q
    |||||||||||||||  ||||||||||||| ||||  ||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  286 cgttacccctg 296  Q
    ||||| |||||    
T  10619951 cgttatccctg 10619961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 22876972 - 22876867
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    ||||||||||||||||||| | |||| ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | || ||||||    
T  22876972 tccttttagtttgacataatttccaagttaat-ttttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctcaagttaatcctttaag 22876874  T
Q  241 tttcaaa 247  Q
    |||||||    
T  22876873 tttcaaa 22876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 31176042 - 31175924
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgat 273  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||| |||||||| |||| |||||| |||||    
T  31176042 tttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagttgat 31175943  T
Q  274 aaactatttcaccgttacc 292  Q
    || ||||| || |||||||    
T  31175942 aatctattccaacgttacc 31175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 122 - 259
Target Start/End: Original strand, 40904677 - 40904814
Alignment:
Q  122 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 221  Q
    |||||||| | || ||| |||||||| ||||||||||| || ||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  40904677 aggtcaaataccactttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataatt 40904776  T
Q  222 cccaagtcagtcatttaagtttcaaatgtttcaaatag 259  Q
      ||| | |||||||||||||| ||| |||||||||||    
T  40904777 ttcaaattagtcatttaagttttaaaagtttcaaatag 40904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 283
Target Start/End: Original strand, 1346485 - 1346624
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || ||  || |||||  ||||||||||||||||||||||||  || ||||||||||||| |||| |||||| |||| ||||||    
T  1346485 tccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcctttaag 1346584  T
Q  241 tttcaaatgtttcaaataggtcttttaattgataaactatttc 283  Q
    ||||||| ||||||   || ||||||| |||||||||||||||    
T  1346585 tttcaaaagtttca---agttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 31893615 - 31893488
Alignment:
Q  122 aggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaat 220  Q
    |||||||| |||||||| | |||||||||||||||| || | | || |||||  |||||||||  ||||||||||||||||| |||||||||||||||||    
T  31893615 aggtcaaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaat 31893516  T
Q  221 tcccaagtcagtcatttaagtttcaaat 248  Q
    || ||||| |||| ||||||||||||||    
T  31893515 tctcaagttagtcctttaagtttcaaat 31893488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 8039662 - 8039807
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||||||||||||||| || ||| |||||  |||||||||||||||||||||||||||| ||||||||||| ||||                   
T  8039662 tttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttgaaagaa--------------- 8039746  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 296  Q
      ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  8039747 --taagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctg 8039807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 288
Target Start/End: Complemental strand, 21413234 - 21413081
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||||||| |||| || |||||| |||||  ||| |||||||||| ||||||||||| | ||||| |||||||||||| | |||| |||      
T  21413234 ttttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttctaagttagt-t 21413136  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 288  Q
    ||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||    
T  21413135 tttaagtttcaaaagtttcaaataggtccttttagttcataaactacttcaccgt 21413081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 293
Target Start/End: Complemental strand, 35215443 - 35215290
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || |  ||| |||||  ||||| |||||||| ||||||||| ||||||||| |||||||||||| |||| | |||| ||||||    
T  35215443 tccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttccaaattagtcttttaag 35215344  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    ||| ||| ||||||||||  || ||||| ||||||||||||||||  |||||||    
T  35215343 ttttaaaagtttcaaataactcattttagttgataaactatttcattgttaccc 35215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 21412865 - 21412989
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||||||||||||||||||||| || ||  || ||| |  ||||||||| ||||||||||||||| || ||||||||||||||||||  ||||| ||||     
T  21412865 ttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcc 21412964  T
Q  235 tttaagtttcaaatgtttcaaatag 259  Q
    ||||||||||||| |||| ||||||    
T  21412965 tttaagtttcaaaagttttaaatag 21412989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 23679603 - 23679497
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcac 285  Q
    |||||||||||||||  ||||||||||||||||||| ||||| |||| ||||||||||||| |||| ||||||  | ||||| |||||||||||||||||    
T  23679603 aagtttcaattaggttcttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagttgataaactatttcac 23679505  T
Q  286 cgttaccc 293  Q
    ||||||||    
T  23679504 cgttaccc 23679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 36566282 - 36566400
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc-ccaagtcagtcattta 238  Q
    ||||||||||||||||| || ||  || |||||  ||||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||| ||||    
T  36566282 gtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctcaaagttagtc-ttta 36566380  T
Q  239 agtttcaaatgtttcaaata 258  Q
    |||||||||  |||||||||    
T  36566381 agtttcaaaattttcaaata 36566400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 288
Target Start/End: Original strand, 20101831 - 20101974
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||  || |||||| ||||| |||||||||||||||||||||||||| || |||||||| ||||| |||  ||||| |||| |||||||||    
T  20101831 ttttagtttgactgaattcccaagttagt-ttttaagtttcgaaagtttcaattagatccttttagttcgacag-attttcaagttagtcctttaagttt 20101928  T
Q  244 caaatgtttcaaatag-gtcttttaattgataaactatttcaccgt 288  Q
     ||| |||| ||||||  ||| ||| ||||||||||||||||||||    
T  20101929 taaaagttttaaatagattctcttagttgataaactatttcaccgt 20101974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 28257062 - 28256949
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||| |||| ||  || ||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||  ||||| ||||     
T  28257062 tttttgtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttcaagttagtcc 28256963  T
Q  235 tttaagtttcaaat 248  Q
    ||||||||| ||||    
T  28256962 tttaagttttaaat 28256949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 21433408 - 21433337
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 258  Q
    |||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||| ||||||||||    
T  21433408 aagtttcaattacgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaata 21433337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 33235637 - 33235518
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    |||| |||| |||||||| |||| |||| ||||||||||||| ||||  ||||| |||| |||||||||||||   |||||||||||| ||||| |||||    
T  33235637 tttacgttttgaaagttttaatttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgat 33235538  T
Q  274 aaactatttcaccgttaccc 293  Q
    |||||||||||| |||||||    
T  33235537 aaactatttcactgttaccc 33235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 39958686 - 39958776
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattccca 225  Q
    |||| |||||||||||||||||||| |   || |||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  39958686 ttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattccca 39958776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 21412931 - 21413047
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || |  ||| |||||  |||||||||| ||||||| || ||| |||||||||||| ||||||||| ||||| |||| ||||||    
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtcttttaag 21413030  T
Q  241 tttcaaatgtttcaaat 257  Q
    ||||||| |||| ||||    
T  21413031 tttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 34951587 - 34951475
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| ||||||||||||| || |  ||| |||||  ||||||||||||||||||||||||| || ||||||||||||| |||| | || ||||||     
T  34951587 ttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatttctaaatcagtcc 34951488  T
Q  235 tttaagtttcaaa 247  Q
    |||||||||||||    
T  34951487 tttaagtttcaaa 34951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 5805679 - 5805592
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||| |||||||||||||| ||| |||||||||||| |||||  ||||| | || ||||||||||||| ||||||||||||||    
T  5805679 tttaagttttgaaagtttcaattatgtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtc 5805592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 301
Target Start/End: Original strand, 20183778 - 20183935
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    ||||||||||||| || |  ||||| |||  ||||| ||| ||||||||||||||| || ||| | ||| | ||| ||||||||| |||| |||||||||    
T  20183778 ttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcctttaagttt 20183876  T
Q  244 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||  ||||||||| ||| ||||| |||||||| |||||||| |||||||||| ||||    
T  20183877 caaaaatttcaaataagtcattttagttgataaattatttcactgttacccctgttgtc 20183935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 41020242 - 41020137
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    ||||||||||||||||||| | |||| ||||| |||||||||| |||||||| |||||| || |||||||||||||||||| | |||| | |  ||||||    
T  41020242 tccttttagtttgacataatttccaagttagt-ttttaagttttgaaagttttaattagatccttttagtttgacagaatttctaagttaattctttaag 41020144  T
Q  241 tttcaaa 247  Q
    |||||||    
T  41020143 tttcaaa 41020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 4187545 - 4187626
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 256  Q
    ||||||||| |||||||||||||||||  |||| |||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  4187545 tttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttcaaaagtttcaaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 21433391 - 21433278
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaagtt 242  Q
    ||||||||||||| || |||||| ||| |  |||||||||| |||||||||| || || ||||| |||||||||||||||||||| ||| | ||||||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtacttttaagtt 21433292  T
Q  243 tcaaatgtttcaaa 256  Q
    |||||  |||||||    
T  21433291 tcaaaaatttcaaa 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 42990539 - 42990658
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||  ||||| | |  ||||||||| ||| |||| || || ||| ||||| |||||    
T  42990539 tttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagttaattttttaagttttaaaagttttaattatgtcattttagttgat 42990638  T
Q  274 aaactatttcaccgttaccc 293  Q
    | ||||||| ||||||||||    
T  42990639 acactattttaccgttaccc 42990658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 8040266 - 8040114
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||| ||  || | |||| ||||| ||||||||||| ||| |||||| ||| || |||||| ||||||||| |||||||| |||| |||||    
T  8040266 gtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaa-tcccaagttagtcctttaa 8040168  T
Q  240 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
             ||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||    
T  8040167 ---------gtttcaaataggtccttttagttgatgaactatttcaccgttacccctgctgtc 8040114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 10620303 - 10620238
Alignment:
Q  183 tcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    |||||||||||||||||| | ||||||||| |||||||| |||||| |||| ||||||||||||||    
T  10620303 tcgaaagtttcaattaggcccttttagtttaacagaatttccaagtaagtcctttaagtttcaaat 10620238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 19925104 - 19925228
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| ||||||||||||| || | |||| ||| |  || |||||||||||||||||||||| || ||||||||||||| |||| |||| | ||||     
T  19925104 ttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatttccaa-ttagtcc 19925202  T
Q  235 tttaagtttcaaatgtttcaaatagg 260  Q
    |||||||||||||  | |||||||||    
T  19925203 tttaagtttcaaaaatatcaaatagg 19925228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 276
Target Start/End: Complemental strand, 20366658 - 20366521
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||  ||| || | |||| |||||  |||||||||| |||||||| |  || || ||||||||||||| ||||| ||||| |||| ||||     
T  20366658 gtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattcgcaagttagtcctttag 20366559  T
Q  240 gtttcaaatgtttcaaataggt-cttttaattgataaa 276  Q
    |||||||| |||||||||| || |||||| ||||||||    
T  20366558 gtttcaaaagtttcaaatatgtccttttagttgataaa 20366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 36566377 - 36566458
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 256  Q
    |||||||||| ||| |||||| || ||||||||||||||||| ||||| ||||| |||| ||||| ||||||| ||||||||    
T  36566377 tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtcctttaaatttcaaaagtttcaaa 36566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 4187763 - 4187663
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 285  Q
    |||||| |||||| || ||||| ||||||||||||  ||||| |||| ||||| ||| ||| |||| ||||||||| ||||| |||||||||||||||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcac 4187664  T
Q  286 c 286  Q
    |    
T  4187663 c 4187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 284
Target Start/End: Complemental strand, 6220449 - 6220351
Alignment:
Q  186 aaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttca 284  Q
    ||||||||||| ||||  ||||||||| | ||||||| ||||| |||| ||||||||||||| ||||  ||||||| |||||| ||||||||||||||||    
T  6220449 aaagtttcaataaggtacttttagtttcatagaattctcaagttagtc-tttaagtttcaaaagttttcaataggttcttttagttgataaactatttca 6220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 33879576 - 33879470
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||| ||||||| || | |||| ||| |  |||||||||| |||||||||| |||||| |||||||| |||| ||||||||||| ||||  ||||    
T  33879576 gtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagtc-cttaa 33879478  T
Q  240 gtttcaaa 247  Q
    ||||||||    
T  33879477 gtttcaaa 33879470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 1286834 - 1286768
Alignment:
Q  230 agtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 296  Q
    |||| ||||||||| ||| |||| ||||| |||||||| |||||||| |||||||||||||||||||    
T  1286834 agtcctttaagttttaaaagttttaaatatgtcttttagttgataaattatttcaccgttacccctg 1286768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 1441011 - 1441065
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 195  Q
    |||||||||||||||| || |||||| ||||||||||||||||| ||||||||||    
T  1441011 tccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaa 1441065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 28104300 - 28104394
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 292  Q
    |||| |||||||||| || ||||| ||||  |||||||||||||||||| |||| ||||| ||| ||||| |||||||| |||||||| ||||||    
T  28104300 ggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcactgttacc 28104394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 27995615 - 27995538
Alignment:
Q  225 aagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||| |||| ||||||||||||| |||| |||||| || ||||| ||||||||||||||||||||||| |||| ||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttactcctgttgtc 27995538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 1441014 - 1441066
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 256  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| ||||||||    
T  1441014 ttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaaa 1441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 5075325 - 5075444
Alignment:
Q  114 tatattttaggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagttt 212  Q
    |||||||||||||||| ||||| || | | |||||||||||||| | ||| ||| |||||  |||||||||  ||||||||||||  ||| ||||| |||    
T  5075325 tatattttaggtcaaatatcatgtttgattcttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtcctttta-ttt 5075423  T
Q  213 gacagaattcccaagtcagtc 233  Q
    |||||||||| ||||| ||||    
T  5075424 gacagaattctcaagttagtc 5075444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 5805041 - 5805104
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||| ||||||||||||||||||| ||||| |||| |||||||||| || ||||||| ||||||    
T  5805041 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtc 5805104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 29591171 - 29591057
Alignment:
Q  146 ttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt--cagtcatttaagttt 243  Q
    ||||||||| |||| |  ||| |||||  |||||||||| ||||||| ||||||||||||||||||||||| ||| | |||||   | || |||||||||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtttgacaaaatccgcaagttataatcctttaagttt 29591072  T
Q  244 caaatgtttcaaata 258  Q
    |||| |||| |||||    
T  29591071 caaaagttttaaata 29591057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 35214871 - 35214942
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||| || || ||| ||||| ||||||||||| ||| |||||| |||||| ||||||||    
T  35214871 gtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaatttcaaataggtctttttagtt 35214942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 19925397 - 19925327
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||| || |||||| |||||  |||||||||| |||||||||| |||||| ||| ||||    
T  19925397 tccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcctttcagtt 19925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 34951521 - 34951415
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || | | || | |||  |||||||||| ||||| | || || | | ||||||||||||| ||||| ||||| |||||||||||    
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcatttaag 34951422  T
Q  241 tttcaaa 247  Q
    |||||||    
T  34951421 tttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 40904755 - 40904837
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 222  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| || ||||| |||||||||||||    
T  40904755 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 40904837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 5559110 - 5559171
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagt-catttaagtttcaaatgtttcaaatag 259  Q
    |||| ||||| ||||||||||||||||||| ||| | ||||||||||||| |||||||||||    
T  5559110 ggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatag 5559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 28104279 - 28104372
Alignment:
Q  118 ttttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||| || ||||| |||||||||||||| ||||| || |||  ||||  |||||||||| ||||||| || || ||| ||||||||    
T  28104279 ttttaggtcaaatattattttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagtt 28104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 31893498 - 31893438
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 247  Q
    ||||||||| || ||| ||||||||||||| ||||| ||||| |||| |||||||||||||    
T  31893498 aagtttcaaataagtccttttagtttgacaaaattctcaagttagtcctttaagtttcaaa 31893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 33879349 - 33879417
Alignment:
Q  174 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||| |||||||| |||||| || ||||| ||||||||||||  ||||| |||||||| ||||    
T  33879349 ttttaagttttgaaagttttaattagatccttttattttgacagaattatcaagttagtcattttagtt 33879417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 5805654 - 5805583
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||  || |  ||| ||| | ||||||||||| |||||||||| |||||||||||||||    
T  5805654 gtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagtt 5805583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 21433207 - 21433282
Alignment:
Q  139 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttga 214  Q
    |||||||||||||||| | || |||||| |||||  |||||||||| |||||||||| || ||  |||||||||||    
T  21433207 agtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 31176017 - 31175946
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||||||||||| || | |||| |||||  |||||||||| ||||||||||  ||||| ||||||||    
T  31176017 gtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 31893597 - 31893534
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||| |||||||||||||||||| | |||| |||| ||||||||| ||| ||||||| ||||||    
T  31893597 ggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtc 31893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 34951291 - 34951362
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||| ||||||||||| ||  || |||||  |||||||||| |||||||||| || ||||||||||||    
T  34951291 gtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagtt 34951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 36566281 - 36566344
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||| |||||||||||||||||||  |||| ||||||||||||||  || ||||||| ||||||    
T  36566281 ggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtc 36566344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 36566568 - 36566525
Alignment:
Q  205 tttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||    
T  36566568 tttagtttgacagaatttccaagttagtcttttaagtttcaaat 36566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 31893258 - 31893316
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    ||||||||||||||||||| ||||| |||  |||||||||| || ||||||| ||||||    
T  31893258 ttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtc 31893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 33235039 - 33235100
Alignment:
Q  201 tcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||||||||||||||||||||| ||||| | || ||||| ||| ||| ||||||| ||||||    
T  33235039 tcattttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtc 33235100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 4187573 - 4187625
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 195  Q
    ||||| ||||||||||| |||||| |||||  |||||||||| ||||||||||    
T  4187573 ctttttgtttgacataattcccaagttagttctttaagtttcaaaagtttcaa 4187625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 10619867 - 10619935
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||| || |  ||| |||||  |||||||||| |||||||||| |||||| ||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 27995064 - 27995112
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 247  Q
    |||| ||||||||||||||||||| ||||| |||  |||||||||||||    
T  27995064 ggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaa 27995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 34951583 - 34951527
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    |||| ||||||||||||||||||  ||||| |||| |||||||||| || |||||||    
T  34951583 ggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaa 34951527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 294
Target Start/End: Complemental strand, 36418516 - 36418365
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 243  Q
    |||||||||||||||| || ||| |||||  |||| ||||| ||||||||||||||||| ||||||||||||| ||||  ||||| |||| |||||||||    
T  36418516 ttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttcaagttagtcctttaagttt 36418417  T
Q  244 caaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccc 294  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  36418416 caaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 36418365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 293
Target Start/End: Original strand, 20728527 - 20728686
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||| ||||||||||||| || | |||| |||||  ||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||     
T  20728527 ttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctcaagttagtcc 20728626  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    ||||||||| ||| |||||||||| ||| ||||| |||| ||||||||||||||||||||    
T  20728627 tttaagttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttaccc 20728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 135 - 289
Target Start/End: Original strand, 13543083 - 13543241
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaag---tcag 231  Q
    |||| |||||||||||||||||||| ||| || ||| |  |||||||||||||||||||||||||||| |||||||||||  ||||| |||||   | ||    
T  13543083 ttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatttccaagttattag 13543182  T
Q  232 tcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 289  Q
    || ||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||    
T  13543183 tcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcaccgtt 13543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 141 - 293
Target Start/End: Complemental strand, 30738377 - 30738223
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || | | || ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||  ||| |||| |    
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaatttt-aattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  241 tttcaaatgtttcaaataggtc-ttttaat--tgataaactatttcaccgttaccc 293  Q
    ||||||| |||||||||| ||| ||||| |  ||||||||||||||||||||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttaccc 30738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 18248996 - 18249124
Alignment:
Q  174 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattga 272  Q
    ||||| |||| |||||||| || || ||| ||||||||| ||||||||| ||||| |||||||||||||||||| |||| ||||||||| ||||| ||||    
T  18248996 ttttacgttttgaaagttttaactatgtccttttagtttaacagaattctcaagttagtcatttaagtttcaaaagttttaaataggtctttttagttga 18249095  T
Q  273 taaactatttcaccgttacccctgatgtc 301  Q
    |||||||||||| ||||||||||| ||||    
T  18249096 taaactatttcatcgttacccctgctgtc 18249124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 5734502 - 5734628
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||| |||| | || ||||||||| ||| |||||||||| ||| ||||| || ||    
T  5734502 tttaagttttgaaagtttcaattatgtcattttaatttgacagaattcctaagtta-tcctttaagttttaaaagtttcaaataagtcattttagttaat 5734600  T
Q  274 aaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||||||||||||||| ||||    
T  5734601 aaactatttcaccgttacccctgctgtc 5734628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 6336458 - 6336298
Alignment:
Q  122 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtatttt-aagtttcgaaagtttcaattaggtcattttagtttgacagaat 220  Q
    |||||||| |||||||| ||||||||||||||||||||        ||||| |||| |||||||||||||||||||||| |  ||||| |||| ||||||    
T  6336458 aggtcaaatatcattttggtccttttagtttgacataa--------ttagtctttttaagtttcgaaagtttcaattagattcttttaatttgtcagaat 6336367  T
Q  221 tcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 288  Q
    ||| |||| |||| ||||| |||||||||||||||||| || |||| | ||||||||||||||||||||    
T  6336366 tcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgataaactatttcaccgt 6336298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 5735100 - 5734944
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||||   || || ||| |||||  ||||| |||||||| ||| ||||| ||| ||||||||| ||||||||| ||||| |||| |||||    
T  5735100 gtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtcctttaa 5735001  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    ||| |||| |||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  5735000 gtt-caaaagtttcaaataggtcattttagttgataaactatttcaccattacccctg 5734944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 32660266 - 32660379
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||| ||| || || ||| |||||  |||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||    
T  32660266 cttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtt 32660365  T
Q  243 tcaaatgtttcaaa 256  Q
    ||||| ||||||||    
T  32660366 tcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 30737779 - 30737900
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaa-ttgat 273  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| ||||| ||| | |||| ||||||||||||| |||| ||||| ||| ||||| |||||    
T  30737779 tttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagtttcaaaagttttaaataagtcatttaagttgat 30737878  T
Q  274 aaactatttcaccgttacccct 295  Q
    ||||| ||| ||||||||||||    
T  30737879 aaactgttttaccgttacccct 30737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 6336147 - 6336263
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||| || || | |||| |||||  |||||||||| ||||||| || |||||||||||||||||| |||||| |||||| |||| |||||    
T  6336147 gtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttccaagttagtcctttaa 6336246  T
Q  240 gtttcaaatgtttcaaa 256  Q
    |||||||| ||||||||    
T  6336247 gtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 32459430 - 32459525
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  32459430 ggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 32459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 35189898 - 35190024
Alignment:
Q  121 taggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 219  Q
    ||||||||| |||| |||||||| ||||| ||||| | || || ||| ||||| ||| ||||||||||||||| || |||||||||||||||||||||||    
T  35189898 taggtcaaatatcacttttagtcattttaatttgatagaattctcaagttagtcttt-aagtttcgaaagttttaaataggtcattttagtttgacagaa 35189996  T
Q  220 ttcccaagtcagtcatttaagtttcaaa 247  Q
     |||||||| |||| |||||||||||||    
T  35189997 ctcccaagttagtcctttaagtttcaaa 35190024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 18951307 - 18951429
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||| || ||| || ||||||||||| ||||||| ||||| |||| |||||    
T  18951307 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctcaagttagtcctttaa 18951406  T
Q  240 gtttcaaatgtttcaaataggtc 262  Q
    |||| ||| |||| |||||||||    
T  18951407 gttttaaaagttttaaataggtc 18951429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 26275511 - 26275616
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||||| || | | || |||||  |||||||||| |||||||||| ||| ||||||||||||||| |||||||||||| ||||||| |||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattcccaagttagtcattcaagtt 26275610  T
Q  243 tcaaat 248  Q
    ||||||    
T  26275611 tcaaat 26275616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 32660238 - 32660325
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||||||||||||||||||||||| ||  ||||||||| ||| ||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  32660238 tttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtc 32660325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 13538468 - 13538625
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-- 232  Q
    |||| |||||||||||||||||||| ||| || |||||  |||| |||||||||||||||||||||||  |||||||||| ||||||  ||||| | |      
T  13538468 ttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaattttcaagttattag 13538567  T
Q  233 --catttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 296  Q
      | |||||||||||||| | |||        ||||| ||||||||||||||||||||||||||||    
T  13538568 tccttttaagtttcaaatatgtca--------ttttagttgataaactatttcaccgttacccctg 13538625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 36417891 - 36417998
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||| ||| || || ||| |||||  ||||| |||||||||||||||||||||  |||| |||||||| ||||| ||||| |||| ||||||    
T  36417891 tccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtcctttaag 36417990  T
Q  241 tttcaaat 248  Q
    ||||||||    
T  36417991 tttcaaat 36417998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 292
Target Start/End: Complemental strand, 13543727 - 13543569
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    ||||| || ||||||||||||| || || ||| ||||| |||||| |||| |||||||  |  || || ||||||||||  |||||||  |||| | ||     
T  13543727 ttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaattcttaagttaatcc 13543628  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 292  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  13543627 tttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacc 13543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 293
Target Start/End: Complemental strand, 20729100 - 20729010
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 293  Q
    ||||||||||||||||||  ||||| |||| ||||| ||| ||| ||||||||||||| |||||| |||||||||||||||||| ||||||    
T  20729100 ttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattaccc 20729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 38405654 - 38405573
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 222  Q
    |||||||||||| ||| || |||||| ||| |  |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38405654 tccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattc 38405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 291
Target Start/End: Complemental strand, 18238390 - 18238306
Alignment:
Q  208 agtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 291  Q
    ||||||||| |||| |||||| |||| ||||||||||||| |||| ||||||||| ||||| |||||||| ||||||||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttcaccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 35891317 - 35891219
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat-aggtcttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||||| ||||  ||||| |||| ||||||||||||| ||||||||| || | ||||  |||||||||||||||| ||||||||||| ||||    
T  35891317 ttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttcagcgttacccctgctgtc 35891219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 31814003 - 31813954
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  31814003 ggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaat 31813954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 1722504 - 1722648
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||| ||| || || ||| |||||  ||||| |||| ||||||| || ||| |  ||||||||||||| ||||| ||||| | || |||||    
T  1722504 gtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 1722603  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttc 283  Q
    |||||||| |||||||||| ||| ||||| || ||||| ||||||    
T  1722604 gtttcaaaagtttcaaatatgtcattttagtttataaattatttc 1722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 18951306 - 18951366
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 259  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||    
T  18951306 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatag 18951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 35190497 - 35190426
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 246  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||||| ||| |  ||| ||||||||||||    
T  35190497 tttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctcaaatttgtcttttaagtttcaa 35190426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 14235567 - 14235688
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||| |||| |   || |||||  ||||||||   ||||||| ||||||||| ||||||||||||||||||| ||||| ||||     
T  14235567 ttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaattctcaagttagtcc 14235666  T
Q  235 tttaagtttcaaatgtttcaaata 258  Q
    |||  |||||| | ||||||||||    
T  14235667 ttt--gtttcacaagtttcaaata 14235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 32459426 - 32459502
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||| ||||||| || |||||||||||||||    
T  32459426 ttttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 32459502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 6336146 - 6336209
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||| |||||||||| ||||||| |||||| |||| ||||||||||||| |||| |||||||||    
T  6336146 ggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtc 6336209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 36418460 - 36418389
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||| |||||||||| |||||| ||||||||    
T  36418460 gtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 36418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 18951368 - 18951449
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 222  Q
    |||||||||||||| | || || ||| |||||  |||||||||  ||||||| || |||||||||||||||||| |||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattc 18951449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 19278710 - 19278862
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||||||| || ||  || |||||  ||||| |||| ||| ||| |||||| |  ||||||||||||||||||| ||||| |    ||||||    
T  19278710 tccttttagtttgacagaattcttaagttagtcctttaaatttcaaaatttt-aattagcttcttttagtttgacagaattctcaagttacctctttaag 19278808  T
Q  241 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 293  Q
    ||||||   |||||||||  || ||||| ||||||||||||||||| |||||||    
T  19278809 tttcaataatttcaaataaatcattttagttgataaactatttcactgttaccc 19278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 32459911 - 32459822
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 292  Q
    |||| ||||||| |||||| ||| | |||| ||||||||| |||  |||||||||||| |||||| | ||||||||||||||| ||||||    
T  32459911 ttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttcactgttacc 32459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 1723044 - 1722933
Alignment:
Q  191 ttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 289  Q
    ||||||||  || ||||||||| ||| |||| | |||| |||  ||||||||| ||| |||| |||||  || ||||| ||||||||||||||||| |||    
T  1723044 ttcaattaaatccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcactgtt 1722945  T
Q  290 acccctgatgtc 301  Q
    ||||||| ||||    
T  1722944 acccctgctgtc 1722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 26275512 - 26275567
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 259  Q
    |||||||||||||||||| | |||| |||  ||||||||||||| |||||||||||    
T  26275512 ttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatag 26275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 26276055 - 26275971
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 296  Q
    ||||||||||||| |||| |||||| |||| |||||||||||||| | ||        |||||| ||||||| ||||||||||||||||||||    
T  26276055 ttttagtttgacaaaatttccaagttagtcctttaagtttcaaatatgtc--------cttttagttgataagctatttcaccgttacccctg 26275971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 30737808 - 30737875
Alignment:
Q  144 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||||||||||||||| || ||| ||||| ||||||||||| ||||||| || || ||||||| ||||    
T  30737808 ttttagtttgacataattctcaaattagtcttttaagtttcaaaagttttaaataagtcatttaagtt 30737875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 36418521 - 36418458
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 262  Q
    |||| ||||||||||||| ||||| ||||| |||| |||| |||||||| ||||||| ||||||    
T  36418521 ggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtc 36418458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 38405651 - 38405600
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 255  Q
    ||||||||| ||||||||||||||| | ||||||||||||| || |||||||    
T  38405651 ttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaa 38405600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 293
Target Start/End: Original strand, 18237920 - 18238010
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 293  Q
    ||||||||||||||||||   |||| | || ||||||||| ||| |||| ||||| || |||||| |||||||| |||||||| |||||||    
T  18237920 ttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgttaccc 18238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 31813948 - 31813894
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 258  Q
    ||||||||||||||||||| |||||  ||||||| | ||||||| ||||||||||    
T  31813948 ttttagtttgacagaattctcaagtatgtcattttaatttcaaaagtttcaaata 31813894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 119 - 301
Target Start/End: Complemental strand, 31247786 - 31247602
Alignment:
Q  119 tttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacag 217  Q
    |||||| |||| |||| |||| ||||||||| ||||||| || | |||| |||||  |||||||||||||||||||||||||||| |||||||| |||||    
T  31247786 tttaggccaaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacag 31247687  T
Q  218 aattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||| |||  ||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||  ||||||||| ||||    
T  31247686 aattcccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactattacccctgttgtc 31247602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 4276174 - 4276301
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    ||||||||| |||||||||||||| ||| ||||||||||||| ||||   | || |||  ||||||||||||| ||||||||||| || ||||| |||||    
T  4276174 tttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttctttaagtttcaaaagtttcaaatagttcattttagttgat 4276273  T
Q  274 aaactatttcaccgttacccctgatgtc 301  Q
    |||||||||||| |||||||||| ||||    
T  4276274 aaactatttcactgttacccctgctgtc 4276301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 21377119 - 21377036
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcc 223  Q
    ||||||||||||||||| || | |||| ||| || ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  21377119 gtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttgacataattcc 21377036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 35555565 - 35555688
Alignment:
Q  174 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattga 272  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||  ||||| ||||  |||| |||  || ||||||||||  || ||||| ||||    
T  35555565 ttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatcaagttagtccattaaattttgaaagtttcaaataaatcattttagttga 35555664  T
Q  273 taaactatttcaccgttacccctg 296  Q
    |||||||||||||||||| |||||    
T  35555665 taaactatttcaccgttatccctg 35555688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 50530230 - 50530332
Alignment:
Q  121 taggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 219  Q
    ||||||||| |||||||| | |||||||||||||||| || |  ||| ||||| ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  50530230 taggtcaaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaa 50530329  T
Q  220 ttc 222  Q
    |||    
T  50530330 ttc 50530332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 4276689 - 4276628
Alignment:
Q  187 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 248  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagtttcaaat 4276628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 3088218 - 3088066
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |  ||| ||| |  ||||| |||||||||||||||||| ||| |||||||||||||  ||| || ||| ||||     
T  3088218 ttttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtcc 3088119  T
Q  235 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccct 295  Q
    ||||||||||         |||||||| ||||||||||||||||||||||||||||| ||||    
T  3088118 tttaagtttc---------aaataggtccttttaattgataaactatttcaccgttatccct 3088066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 301
Target Start/End: Original strand, 21376565 - 21376732
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||||||||||||| ||||||  ||||   || ||||  |||||| |||  ||||||| ||||| ||  ||||||||||| ||||||  || ||  |||     
T  21376565 ttttagtccttttaatttgactgaacttttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaattttcaggttggtcc 21376664  T
Q  235 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||||||| ||| ||||    
T  21376665 tttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttaccactgctgtc 21376732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 14964648 - 14964749
Alignment:
Q  141 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 240  Q
    |||||||||||| || ||| |||||| ||||| ||| |||||| |||||||||||||| ||| ||||||||||||||||||| ||| | |||| ||| ||    
T  14964648 tccttttagtttaacttaattcccaagttagtcttt-aagttttgaaagtttcaattatgtctttttagtttgacagaattctcaaataagtccttttag 14964746  T
Q  241 ttt 243  Q
    |||    
T  14964747 ttt 14964749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 19153885 - 19153974
Alignment:
Q  204 ttttagtttgacagaattcc-caagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 291  Q
    ||||||||||||||||||   ||||| ||| ||||||||||||||||||||||||| ||| ||||| |||||||| |||||||| |||||    
T  19153885 ttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaattatttcactgttac 19153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 54456679 - 54456764
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 288  Q
    |||||||||||||||||| | || | ||||||||||||||| || |||||||||| ||| ||||| ||||||||||| ||||||||    
T  54456679 ttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaactaattcaccgt 54456764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 54456912 - 54456799
Alignment:
Q  143 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 242  Q
    |||||||||||| | |||| |||| ||| |   |||||| || |||||||||| |||||| ||||| ||||||| |||| |||||| |||| ||||||||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagtt 54456813  T
Q  243 tcaaatgtttcaaa 256  Q
    ||||| ||||||||    
T  54456812 tcaaaagtttcaaa 54456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 54456651 - 54456746
Alignment:
Q  117 attttaggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||| |||||||| |||||||| | |||||||||||||||| || | | || |||||  ||||||||||||||||||||| || ||||||||||||    
T  54456651 atttaaggtcaaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagtt 54456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 31247195 - 31247292
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    ||||||||||||| ||||| ||||| |||| ||||||||||||| |||||||||| || || ||| |||||||||||||| || ||||| |||| ||||    
T  31247195 ttttagtttgacaaaattctcaagttagtc-tttaagtttcaaaagtttcaaataagtcctattagttgataaactattttactgttactcctgctgtc 31247292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 301
Target Start/End: Original strand, 14629288 - 14629382
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctga 297  Q
    |||| ||||| ||||||||||||||||||| |||| |||||         |||||||||||| ||||||| |||||||| |||||||||||||||||||     
T  14629288 ggtccttttactttgacagaattcccaagttagtcctttaa---------gtttcaaataggttcttttagttgataaattatttcaccgttacccctgt 14629378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 292
Target Start/End: Complemental strand, 21410355 - 21410273
Alignment:
Q  211 ttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa-taggtc-ttttaattgataaactatttcaccgttacc 292  Q
    ||||||||||||| |||||| |||||||||||||||| |||| ||| || ||| ||||| ||||||||||||||||| ||||||    
T  21410355 ttgacagaattcc-aagtcaatcatttaagtttcaaaagttttaaattatgtcattttagttgataaactatttcactgttacc 21410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 24707475 - 24707558
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 286  Q
    ||||||||| |||||||| |||||| |||| |||||||||  || |||| |||||  || ||||| ||||||||||||||||||    
T  24707475 ttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttcacc 24707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 5505822 - 5505741
Alignment:
Q  179 agtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaagtttcaaatgtttcaaatag 259  Q
    ||||||||||||||||||||| || |||| |||||||| |||| | || | ||| | ||||||||||||| |||| ||||||    
T  5505822 agtttcgaaagtttcaattagatcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatag 5505741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 5505800 - 5505692
Alignment:
Q  141 tccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttag-tttgacagaattcccaagtcagtcattta 238  Q
    ||||||| ||||||||||| | | || |||||  ||||||||||| ||||||| || ||| || |||||| ||| |||||||| | |||| |||| ||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttttaacagaatttctaagttagtccttta 5505701  T
Q  239 agtttcaaa 247  Q
    |||||||||    
T  5505700 agtttcaaa 5505692  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 54456940 - 54456844
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 270  Q
    ||||||||| ||||| ||||||||| |  ||||||||||| |||| | |||| | | ||  |||||| ||||| ||||||||||||| |||||||||    
T  54456940 tttaagtttagaaagcttcaattagattcttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatt 54456844  T

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Target: scaffold0070 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 296
Target Start/End: Original strand, 28548 - 28705
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||| ||||||| || | |||| |||||  ||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||| |||||    
T  28548 gtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaa 28647  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
      |||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  28648 aattcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccctg 28705  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 28547 - 28619
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 270  Q
    |||| ||||| |||||||||||| |||||| |||| |||||||||  || ||||||| ||||| |||||||||    
T  28547 ggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatt 28619  T

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Target: scaffold0019 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 124482 - 124351
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| |||||||| |||||| |||| |||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||     
T  124482 ttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcc 124383  T
Q  235 tttaagtttcaaatgtttcaaataggtctttt 266  Q
    |||||||||| || ||||||| ||||||||||    
T  124382 tttaagtttcgaaagtttcaattaggtctttt 124351  T

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Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 124417 - 124329
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 228  Q
    ||||||||||||||||| || | |||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  124417 gtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagt 124329  T

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Target: scaffold0019; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 124142 - 124262
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 234  Q
    |||| ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||  ||||  ||||||||||||||||||||||| | ||||     
T  124142 ttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattcccaatttagtc- 124240  T
Q  235 tttaagtttcaaatgtttcaaa 256  Q
    ||||||||||||| ||||||||    
T  124241 tttaagtttcaaaagtttcaaa 124262  T

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Target: scaffold0019; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 124146 - 124208
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 261  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||||||| |||||||| ||||    
T  124146 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggt 124208  T

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Target: scaffold0746 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 620 - 498
Alignment:
Q  175 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 273  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||| ||||| ||||||| |||||||||||||| ||||| |||||    
T  620 tttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagttgat 521  T
Q  274 aaactatttcaccgttacccctg 296  Q
    |||||||||||| ||||||||||    
T  520 aaactatttcactgttacccctg 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 25 - 186
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    |||||||||||||||||||| || ||| |||||  || ||||||| ||||||| || ||  || |||||||||||| ||||||| |||| ||| ||||||    
T  25 gtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagt-atttaa 123  T
Q  240 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||| ||| |||||||||| ||| ||||| ||||||||||||||||| ||||| |||| ||||    
T  124 gtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttactcctgttgtc 186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 595 - 524
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    ||||||||| ||||||| || || ||| |||||  ||||| |||| |||||||||| |||||||||||||||    
T  595 gtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagtt 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 122 - 259
Target Start/End: Complemental strand, 45341 - 45204
Alignment:
Q  122 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 221  Q
    |||||||| | || ||| |||||||| ||||||||||| || ||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  45341 aggtcaaataccactttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataatt 45242  T
Q  222 cccaagtcagtcatttaagtttcaaatgtttcaaatag 259  Q
      ||| | |||||||||||||| ||| |||||||||||    
T  45241 ttcaaattagtcatttaagttttaaaagtttcaaatag 45204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 45263 - 45181
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 222  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| || ||||| |||||||||||||    
T  45263 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 45181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 296
Target Start/End: Original strand, 9377 - 9546
Alignment:
Q  120 ttaggtcaaaaatcatttta-gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacaga 218  Q
    |||||||||| ||||||||  ||||||||||||||||| || ||  || |||||  ||||||||||| |||||||||||||||| ||||||||| | |||    
T  9377 ttaggtcaaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaataga 9476  T
Q  219 attcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 296  Q
    |||| ||||| |||  |||||         ||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  9477 attctcaagttagttctttaa---------gtttcaaataggtccttttagttgataaactatttcactgttacccctg 9546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 9993 - 9891
Alignment:
Q  140 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 239  Q
    ||||||||||||||||| || || ||| |||||  ||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| |    
T  9993 gtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagttagtcctttta 9894  T
Q  240 gtt 242  Q
    |||    
T  9893 gtt 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 16176 - 16274
Alignment:
Q  199 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 296  Q
    |||| ||||||||||| | |||| |||| | |||| ||||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  16176 ggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactatttcaccgttacccctg 16274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 16663 - 16565
Alignment:
Q  204 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 301  Q
    |||| |||||| | |||| |||||| | || ||||||||| ||| |||| ||||| ||| ||||| ||||||||||||||||| |||| ||||| ||||    
T  16663 tttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactatttcacagttatccctgttgtc 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 16172 - 16248
Alignment:
Q  135 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 211  Q
    |||| ||||||||||||||| | || | |||| |||||  |||||||||  ||||||| || |||||||||||||||    
T  16172 ttttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagtt 16248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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