View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8263_low_6 (Length: 430)

Name: NF8263_low_6
Description: NF8263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8263_low_6
NF8263_low_6
[»] chr1 (30 HSPs)
chr1 (12-269)||(4882568-4882824)
chr1 (332-430)||(424336-424434)
chr1 (332-430)||(7995605-7995703)
chr1 (334-430)||(32784088-32784184)
chr1 (332-426)||(12871599-12871693)
chr1 (348-430)||(4882404-4882486)
chr1 (332-430)||(27534677-27534775)
chr1 (332-425)||(33487080-33487173)
chr1 (336-430)||(3232770-3232864)
chr1 (336-430)||(20411555-20411649)
chr1 (332-425)||(28678180-28678273)
chr1 (336-430)||(14265266-14265360)
chr1 (332-430)||(18343592-18343690)
chr1 (336-430)||(29205267-29205361)
chr1 (332-422)||(42490871-42490961)
chr1 (336-427)||(13488584-13488675)
chr1 (349-427)||(37822393-37822471)
chr1 (332-425)||(45750456-45750549)
chr1 (332-426)||(45193675-45193769)
chr1 (362-430)||(10627008-10627076)
chr1 (364-428)||(44517157-44517221)
chr1 (336-427)||(4871074-4871165)
chr1 (339-430)||(17347584-17347674)
chr1 (332-395)||(33939082-33939145)
chr1 (332-426)||(42276335-42276428)
chr1 (380-430)||(51418040-51418089)
chr1 (381-430)||(29726641-29726690)
chr1 (336-424)||(32878690-32878776)
chr1 (398-430)||(15391297-15391329)
chr1 (333-409)||(15791554-15791630)
[»] scaffold0312 (1 HSPs)
scaffold0312 (332-430)||(6115-6213)
[»] chr5 (29 HSPs)
chr5 (332-430)||(17331306-17331404)
chr5 (332-430)||(32347759-32347858)
chr5 (332-430)||(28040607-28040705)
chr5 (338-430)||(17699537-17699629)
chr5 (334-430)||(29097769-29097865)
chr5 (336-430)||(27241046-27241140)
chr5 (332-430)||(33164513-33164611)
chr5 (332-427)||(6281022-6281117)
chr5 (332-430)||(17096284-17096385)
chr5 (332-430)||(43493850-43493948)
chr5 (332-430)||(6635227-6635326)
chr5 (337-427)||(42609127-42609217)
chr5 (337-430)||(178151-178244)
chr5 (332-427)||(26295106-26295201)
chr5 (339-430)||(34431045-34431136)
chr5 (333-430)||(20483165-20483262)
chr5 (332-430)||(3740336-3740433)
chr5 (364-430)||(39179873-39179939)
chr5 (337-430)||(12439679-12439771)
chr5 (332-425)||(23882166-23882259)
chr5 (336-424)||(981076-981164)
chr5 (336-424)||(39531454-39531540)
chr5 (336-426)||(6681923-6682013)
chr5 (367-428)||(3079352-3079413)
chr5 (332-393)||(7771888-7771949)
chr5 (384-430)||(12891706-12891752)
chr5 (363-426)||(17687214-17687277)
chr5 (347-430)||(42396557-42396640)
chr5 (380-428)||(18653808-18653856)
[»] chr8 (34 HSPs)
chr8 (334-430)||(41361712-41361808)
chr8 (332-425)||(37612631-37612724)
chr8 (332-428)||(1810275-1810370)
chr8 (332-430)||(10147924-10148023)
chr8 (332-430)||(2025262-2025360)
chr8 (336-430)||(10338875-10338969)
chr8 (332-430)||(24791221-24791319)
chr8 (332-430)||(30026933-30027031)
chr8 (332-430)||(39067742-39067840)
chr8 (332-430)||(14600751-14600849)
chr8 (336-430)||(31202440-31202534)
chr8 (337-430)||(9501572-9501666)
chr8 (332-426)||(11161860-11161954)
chr8 (332-430)||(31407801-31407899)
chr8 (332-427)||(13570782-13570877)
chr8 (336-430)||(2234523-2234617)
chr8 (336-430)||(12329608-12329702)
chr8 (339-428)||(1039948-1040037)
chr8 (332-430)||(23971147-23971245)
chr8 (336-430)||(24699812-24699908)
chr8 (332-430)||(31308120-31308224)
chr8 (339-430)||(3204809-3204899)
chr8 (355-430)||(15288851-15288926)
chr8 (355-430)||(15469220-15469295)
chr8 (380-430)||(37128539-37128589)
chr8 (338-425)||(30039389-30039476)
chr8 (380-430)||(4757191-4757241)
chr8 (339-425)||(10334159-10334245)
chr8 (393-430)||(7579908-7579945)
chr8 (332-388)||(7583859-7583915)
chr8 (390-430)||(22787528-22787568)
chr8 (332-402)||(13576257-13576326)
chr8 (338-425)||(2968513-2968603)
chr8 (361-422)||(28297169-28297230)
[»] chr7 (39 HSPs)
chr7 (332-430)||(42603814-42603912)
chr7 (334-430)||(5684345-5684441)
chr7 (334-430)||(5709395-5709491)
chr7 (336-430)||(28664957-28665051)
chr7 (335-430)||(17473768-17473863)
chr7 (335-430)||(17579351-17579446)
chr7 (332-429)||(11832996-11833094)
chr7 (334-430)||(9785297-9785393)
chr7 (332-430)||(45457601-45457699)
chr7 (334-430)||(22747553-22747648)
chr7 (332-430)||(21603441-21603538)
chr7 (332-430)||(36579357-36579455)
chr7 (336-430)||(39533020-39533114)
chr7 (332-430)||(46026074-46026172)
chr7 (332-430)||(48304440-48304538)
chr7 (332-425)||(45482042-45482135)
chr7 (332-430)||(6667373-6667472)
chr7 (332-430)||(21990639-21990738)
chr7 (336-430)||(1281182-1281276)
chr7 (336-430)||(10574363-10574457)
chr7 (332-430)||(17509249-17509346)
chr7 (332-430)||(17543868-17543965)
chr7 (332-430)||(3266360-3266464)
chr7 (332-430)||(41287935-41288034)
chr7 (332-422)||(27535434-27535524)
chr7 (332-430)||(42644654-42644752)
chr7 (336-430)||(32740734-32740829)
chr7 (348-430)||(2622586-2622668)
chr7 (367-430)||(43847083-43847146)
chr7 (380-430)||(10094467-10094517)
chr7 (380-430)||(15674657-15674707)
chr7 (341-430)||(24320268-24320357)
chr7 (336-416)||(21954878-21954957)
chr7 (336-416)||(39707272-39707351)
chr7 (340-430)||(9720019-9720103)
chr7 (336-388)||(36719628-36719680)
chr7 (332-376)||(40761567-40761611)
chr7 (356-430)||(32643014-32643088)
chr7 (381-422)||(14657876-14657917)
[»] chr3 (40 HSPs)
chr3 (332-430)||(36691852-36691950)
chr3 (332-430)||(48652493-48652591)
chr3 (332-430)||(11819061-11819159)
chr3 (332-430)||(3456921-3457019)
chr3 (332-430)||(14585440-14585538)
chr3 (332-430)||(31462799-31462897)
chr3 (336-430)||(32080807-32080901)
chr3 (332-430)||(13702025-13702123)
chr3 (336-430)||(31270308-31270402)
chr3 (332-425)||(30156340-30156432)
chr3 (334-430)||(54239071-54239167)
chr3 (332-430)||(34960911-34961009)
chr3 (332-430)||(53155483-53155581)
chr3 (332-430)||(55090636-55090734)
chr3 (332-425)||(4206569-4206662)
chr3 (332-430)||(49628140-49628239)
chr3 (332-414)||(1074962-1075044)
chr3 (332-430)||(36624747-36624845)
chr3 (332-430)||(39610182-39610288)
chr3 (334-430)||(35174684-35174780)
chr3 (348-430)||(24483731-24483813)
chr3 (332-430)||(27189447-27189545)
chr3 (332-430)||(38527241-38527339)
chr3 (337-430)||(40013325-40013421)
chr3 (332-430)||(48400877-48400975)
chr3 (354-430)||(22484965-22485041)
chr3 (336-430)||(19645203-19645297)
chr3 (334-430)||(40883921-40884018)
chr3 (338-415)||(53402614-53402691)
chr3 (383-430)||(41868347-41868394)
chr3 (364-427)||(4817886-4817949)
chr3 (221-261)||(4512853-4512893)
chr3 (378-430)||(33637427-33637479)
chr3 (398-430)||(34103770-34103802)
chr3 (384-426)||(2147756-2147799)
chr3 (332-430)||(19861333-19861428)
chr3 (380-425)||(106093-106139)
chr3 (337-387)||(48854889-48854939)
chr3 (332-375)||(49628194-49628238)
chr3 (364-427)||(54706724-54706788)
[»] chr2 (40 HSPs)
chr2 (332-430)||(17268169-17268267)
chr2 (332-430)||(9690018-9690116)
chr2 (332-430)||(12704665-12704763)
chr2 (332-430)||(25067830-25067928)
chr2 (332-430)||(43474173-43474271)
chr2 (336-430)||(44942267-44942361)
chr2 (332-430)||(11937903-11938002)
chr2 (332-426)||(15919852-15919946)
chr2 (332-430)||(20561177-20561275)
chr2 (332-430)||(22597113-22597211)
chr2 (336-430)||(27095687-27095781)
chr2 (332-430)||(5754266-5754364)
chr2 (332-430)||(9978714-9978812)
chr2 (332-430)||(18089437-18089535)
chr2 (333-430)||(13740705-13740801)
chr2 (336-426)||(33012059-33012149)
chr2 (332-430)||(38535350-38535448)
chr2 (339-430)||(35333490-35333581)
chr2 (332-427)||(36867986-36868081)
chr2 (333-430)||(4739310-4739405)
chr2 (332-426)||(34416810-34416904)
chr2 (332-430)||(38384487-38384585)
chr2 (332-430)||(32015198-32015300)
chr2 (336-428)||(4604354-4604446)
chr2 (332-430)||(7072993-7073091)
chr2 (332-430)||(31908861-31908959)
chr2 (332-430)||(34963111-34963208)
chr2 (332-430)||(13879051-13879157)
chr2 (332-430)||(14019176-14019282)
chr2 (378-430)||(4426703-4426755)
chr2 (342-427)||(34470952-34471039)
chr2 (347-430)||(10287051-10287133)
chr2 (342-430)||(4732059-4732147)
chr2 (332-430)||(28231142-28231240)
chr2 (336-430)||(28261933-28262032)
chr2 (380-430)||(32314468-32314518)
chr2 (338-425)||(11798566-11798653)
chr2 (332-376)||(12891188-12891232)
chr2 (336-426)||(17767600-17767690)
chr2 (231-269)||(8799510-8799548)
[»] chr6 (20 HSPs)
chr6 (332-430)||(12481415-12481513)
chr6 (332-430)||(15590124-15590222)
chr6 (332-430)||(6419903-6420001)
chr6 (332-430)||(21507853-21507951)
chr6 (336-428)||(31937466-31937557)
chr6 (332-430)||(8693702-8693803)
chr6 (332-430)||(14783216-14783314)
chr6 (332-430)||(23654228-23654326)
chr6 (333-430)||(35219949-35220045)
chr6 (332-430)||(2304855-2304953)
chr6 (338-407)||(29927447-29927516)
chr6 (334-426)||(4921930-4922023)
chr6 (333-430)||(19402853-19402950)
chr6 (361-427)||(4393777-4393843)
chr6 (391-430)||(31937576-31937615)
chr6 (332-396)||(4084996-4085060)
chr6 (383-427)||(6296297-6296341)
chr6 (383-427)||(6303107-6303151)
chr6 (398-430)||(23638163-23638195)
chr6 (395-430)||(15057722-15057757)
[»] chr4 (48 HSPs)
chr4 (332-430)||(29268822-29268920)
chr4 (332-426)||(43244430-43244524)
chr4 (333-428)||(394321-394416)
chr4 (334-428)||(51152105-51152199)
chr4 (332-430)||(6911658-6911756)
chr4 (332-430)||(7060302-7060400)
chr4 (332-430)||(22757072-22757170)
chr4 (332-430)||(30202016-30202114)
chr4 (332-430)||(44757087-44757185)
chr4 (334-423)||(31521962-31522051)
chr4 (334-430)||(8712510-8712606)
chr4 (332-427)||(24825627-24825722)
chr4 (332-430)||(478057-478154)
chr4 (336-430)||(26742508-26742602)
chr4 (339-423)||(13965545-13965629)
chr4 (332-427)||(24611847-24611942)
chr4 (332-430)||(39837572-39837671)
chr4 (332-430)||(24568758-24568856)
chr4 (332-430)||(25658145-25658243)
chr4 (332-427)||(24100117-24100212)
chr4 (336-430)||(26674354-26674448)
chr4 (332-427)||(29922812-29922910)
chr4 (356-430)||(6881958-6882032)
chr4 (341-427)||(7083864-7083950)
chr4 (336-430)||(7861250-7861344)
chr4 (340-430)||(20399948-20400038)
chr4 (347-425)||(38944197-38944275)
chr4 (337-425)||(5814330-5814418)
chr4 (332-424)||(11210364-11210456)
chr4 (334-430)||(19745369-19745465)
chr4 (334-430)||(19794341-19794437)
chr4 (334-430)||(27394810-27394906)
chr4 (332-424)||(7084184-7084276)
chr4 (336-426)||(22049453-22049543)
chr4 (332-430)||(626594-626690)
chr4 (368-430)||(43493332-43493394)
chr4 (342-430)||(45351115-45351205)
chr4 (342-430)||(45360594-45360684)
chr4 (362-430)||(50801225-50801293)
chr4 (380-430)||(39523435-39523485)
chr4 (363-430)||(2447809-2447876)
chr4 (340-430)||(13586286-13586370)
chr4 (341-420)||(20887810-20887889)
chr4 (337-426)||(12717166-12717255)
chr4 (390-430)||(8517501-8517541)
chr4 (332-426)||(3159021-3159115)
chr4 (354-425)||(36124397-36124468)
chr4 (334-430)||(42197533-42197628)
[»] scaffold1379 (2 HSPs)
scaffold1379 (332-426)||(1135-1229)
scaffold1379 (380-430)||(1-51)
[»] scaffold0536 (1 HSPs)
scaffold0536 (332-430)||(2878-2978)
[»] scaffold0321 (1 HSPs)
scaffold0321 (347-430)||(7169-7252)
[»] scaffold0056 (1 HSPs)
scaffold0056 (332-430)||(74142-74240)
[»] scaffold0155 (1 HSPs)
scaffold0155 (337-422)||(35065-35150)
[»] scaffold0001 (1 HSPs)
scaffold0001 (332-430)||(404303-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (334-430)||(2462-2557)
[»] scaffold0121 (1 HSPs)
scaffold0121 (332-430)||(13290-13392)
[»] scaffold1350 (1 HSPs)
scaffold1350 (332-430)||(1553-1650)
[»] scaffold0294 (1 HSPs)
scaffold0294 (339-430)||(4112-4202)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 269
Target Start/End: Complemental strand, 4882824 - 4882568
Alignment:
Q  12 atggacatcaataggtgtagtaaaacaggttcaatctgtcagaccagtttgtttagtctgctatttttgaccagatgaacttccattttgaacttgtcgc 111  Q
    ||||||||||||||||||||||||| |||||||||||||| || | |||||||||| | | ||||||||||||||||||||||||||||||||||| |||    
T  4882824 atggacatcaataggtgtagtaaaataggttcaatctgtcggatcggtttgtttagcccgttatttttgaccagatgaacttccattttgaacttgccgc 4882725  T
Q  112 ttttagttgactcgtcccattaaacttgttgaaaaaatggggtggggcagagacagggccgacctgcatgccaactcgtcaacctgcaatttatttaann 211  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  4882724 ttttagttgactcgtcccgttaaacttgttgaaaaaatggggtggggcagagacagggccgacctgcatgccaactcgtcaacctgcaatttatttaa-t 4882626  T
Q  212 nnnnnnactaatgggtcaaacataatttaaagtgaagcgaccaaataactcattataa 269  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4882625 ttttttactaatgggtcaaacataatttaaagtgaagcgaccaaataactcattataa 4882568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 424434 - 424336
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  424434 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 424336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 7995703 - 7995605
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7995703 agaggggtgatttagggtcaattttgacccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 7995605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 32784088 - 32784184
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  32784088 aggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccttattgaataagtgatttcacatattttctgtt 32784184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 426
Target Start/End: Original strand, 12871599 - 12871693
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  12871599 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcattatatcctaatcgaataagtgatttcacatattttc 12871693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 4882486 - 4882404
Alignment:
Q  348 gtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4882486 gtcaatttcgacccaaaaatcacccctccgatttgtttttcattatatcctaattgaataagtgatttcacatattttctgtt 4882404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 27534677 - 27534775
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||| |||||| |||||||||||||||| |||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  27534677 agagggatgatttagggtcaattttgacccaaaaatcatccctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 27534775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 33487173 - 33487080
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||| |||||||    
T  33487173 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaatatgtgatttcatatatttt 33487080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 3232770 - 3232864
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||| | ||||||||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  3232770 gggtgatttagggtcaattttgatcaaaaaatcacccctccgaattgtttttccttctatcctaattgaataaatgatttcacatattttctgtt 3232864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 20411555 - 20411649
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | ||||||||| || ||| | ||||||||||||||||||||||||||||||||    
T  20411555 gggtgatttatggtcaattttgacccaaaaatcacccatccgaattgtttttctttttattcaaattgaataagtgatttcacatattttctgtt 20411649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 28678273 - 28678180
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  28678273 agaggggtgatttagggtcaattttgacccaaaaatcactcgtccgaattgtttttcgttctatcataattgaataagtgatttcacatatttt 28678180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 14265266 - 14265360
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||||  ||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  14265266 gggtgatttagggtcaattttgacaaaaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacatattttctgtt 14265360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 18343592 - 18343690
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| | |||| ||||||||||||||||||||| | ||||||||||| ||||| | ||||| ||| |||||||||||||||||||||||    
T  18343592 agaggggtgatttaggatcaattttgacccaaaaatcaccccttcgatttgtttttccttctaccttaattaaatgagtgatttcacatattttctgtt 18343690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 29205267 - 29205361
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| |||||||||||||||||||||   | ||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  29205267 gggtgatttagggtcaattttgacccaaaaatcaccccttggaattgtttttccttctatcataattgaataagtgatttcatatattttctgtt 29205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 42490871 - 42490961
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatat 422  Q
    |||| ||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||    
T  42490871 agagaggtgatttagggtcaagtttgacctaaaaatcacccctccgaattgtttttcgttctatcttaattgaataagtgatttcacatat 42490961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 427
Target Start/End: Complemental strand, 13488675 - 13488584
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||||||| |||| | ||||||||||||||||||| ||| ||||||||||| ||| | | |||||||||||||||||| |||||||||||    
T  13488675 gggtgatttagggtcgattttgacccaaaaatcacccatccgatttgtttttccttccaccttaattgaataagtgattttacatattttct 13488584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 37822471 - 37822393
Alignment:
Q  349 tcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||| |||||||||||||| |||| ||  | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37822471 tcaattttgacccaaaaattacccttctgaattgtttttccttctatcctaattgaataagtgatttcacatattttct 37822393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 425
Target Start/End: Original strand, 45750456 - 45750549
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||||||||||| |||||| |||||||||||||||| |  ||| |||  |||||| || |||||||||||||||||| ||||||||||||||    
T  45750456 agaggggtgatttaaggtcaattttgacccaaaaatcatcaatccgattgttttttccttttatcctaattgaataagttatttcacatatttt 45750549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 45193769 - 45193675
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacatattttc 426  Q
    ||||||| |||||| |||||| ||| |||||| ||| |||||||| | |||||||| | |||||||||||||||||||||||||||||||||||||    
T  45193769 agaggggcgatttagggtcaattttaacccaataat-acccctccgagttgttttttccttctatcctaattgaataagtgatttcacatattttc 45193675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 430
Target Start/End: Original strand, 10627008 - 10627076
Alignment:
Q  362 aaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||| |||||| | ||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  10627008 aaaaatcatccctccgagttgtttttctttatatcctaattgaataagtaatttcacatattttctgtt 10627076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 44517157 - 44517221
Alignment:
Q  364 aaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    ||||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  44517157 aaatcacccttccgaattgtttttccttctatcctaattcaataagtgatttcacatattttctg 44517221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 427
Target Start/End: Complemental strand, 4871165 - 4871074
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||||||| | |||| |||||| || |||||||| |||| | ||||||||| || ||| |||||||||||||| ||||||||||||||||    
T  4871165 gggtgatttaagatcaattttgactcataaatcaccactccgaattgtttttccttttattctaattgaataagttatttcacatattttct 4871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 17347584 - 17347674
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||| |||||| ||||||| ||||||||||| ||| | ||||||||  ||||||| |||  |||||||||||||||||| |||||||||    
T  17347584 tgatttagggtcaattttgacc-aaaaatcacccatccgagttgttttttcttctatcataaaggaataagtgatttcacatcttttctgtt 17347674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 33939145 - 33939082
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctat 395  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||| ||||||    
T  33939145 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttctttctat 33939082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 426
Target Start/End: Original strand, 42276335 - 42276428
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||||||||| ||| |  |||||| ||||| |||||||||| | ||||||||  ||||||| ||||| ||||| |||||||||||||||||    
T  42276335 agaggggtgatttagggttatttttgacacaaaa-tcacccctccgaattgttttttcttctatcataattaaataactgatttcacatattttc 42276428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 51418040 - 51418089
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  51418040 ttgtttttccttctatcctaattgaa-aagtgatttcacatattttctgtt 51418089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 430
Target Start/End: Complemental strand, 29726690 - 29726641
Alignment:
Q  381 tgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  29726690 tgtttttccttatatcctaatcgaataagtgatttcacatattttctgtt 29726641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 424
Target Start/End: Original strand, 32878690 - 32878776
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattt 424  Q
    |||||||||| ||| || |||||||||||| ||| || ||| | |||||||||  |||||||||||| |||||||| ||||||||||||    
T  32878690 gggtgatttagggttaattttgacccaaaa-tcatccttccgagttgtttttccctctatcctaattaaataagtg-tttcacatattt 32878776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 15391329 - 15391297
Alignment:
Q  398 taattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||||| |||||||||    
T  15391329 taattgaataagtgatttcacatgttttctgtt 15391297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 15791630 - 15791554
Alignment:
Q  333 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataag 409  Q
    ||||| ||||||| | |||| |||||| |||||||||| | ||| | ||||||||| || |||| ||||||||||||    
T  15791630 gagggctgatttaggatcaattttgacacaaaaatcactcatccgagttgtttttccttatatcttaattgaataag 15791554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 6115 - 6213
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6115 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 6213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 9e-37; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 17331306 - 17331404
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  17331306 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctatcttaattgaataagtgatttcacatattttctgtt 17331404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 32347858 - 32347759
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  32347858 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgacttgttttttccttctatcctaattgaataagtgatttcacatattttctgtt 32347759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 28040607 - 28040705
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | | ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  28040607 agaggggtgatttacggtcaattttgacccaaaaatcacccctccaaatcgtttttccttatatcctaattgaataagtgatttcacatattttctgtt 28040705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 17699537 - 17699629
Alignment:
Q  338 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17699537 gtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacatcttttctgtt 17699629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 29097769 - 29097865
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  29097769 aggggtgatttagggtcaattttgacccaaagatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 29097865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 27241046 - 27241140
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||| ||||||||||||||||||||||  | ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  27241046 gggtgatttatgatcaattttgacccaaaaatcacccctctgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 27241140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 33164611 - 33164513
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||| | ||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  33164611 agaggggtgatttatggtcaattttgactcaaaaatcactcctccgaattgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 33164513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 6281022 - 6281117
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  | || |||||| |||||| ||||||||||||||||||| |||||||||||    
T  6281022 agaggggtgatttatggtcaattttgacccaaaaatcacccctctgaattatttttccttctattctaattgaataagtgattttacatattttct 6281117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 17096385 - 17096284
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt---cattctatcctaattgaataagtgatttcacatattttctg 428  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| | ||||||||   | |||||||||||||||||||||||||||||||||||||||    
T  17096385 agaggggtgatttagggtcaattttgacccaataatcacccctcccagttgttttttttccttctatcctaattgaataagtgatttcacatattttctg 17096286  T
Q  429 tt 430  Q
    ||    
T  17096285 tt 17096284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 43493850 - 43493948
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||| | ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  43493850 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgaattgtttttccttctattctaattgaataagtgatttcacatattttttgtt 43493948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 6635227 - 6635326
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcaccc-ctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||| || ||| ||||||||||||||||||| |||  | ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  6635227 agagggatgatttagggccaattttgacccaaaaatcaccctctctgagttgtttttccttctatcataattgaataagtgatttcacatattttctgtt 6635326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 42609127 - 42609217
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    ||||||||| |||||| ||||||| ||||||||| | ||| | ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42609127 ggtgatttagggtcaattttgacctaaaaatcactcatccgaattgttttttcttctatcctaattgaataagtgatttcacatattttct 42609217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 430
Target Start/End: Complemental strand, 178244 - 178151
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| |||||| |||||| ||||||||||| |||| | |||| |||| || ||||||||||||||||||||||||||||||||| ||||    
T  178244 ggtgatttaaggtcaattttgactcaaaaatcacctctccgagttgtgtttccttatatcctaattgaataagtgatttcacatattttatgtt 178151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 427
Target Start/End: Complemental strand, 26295201 - 26295106
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||| ||||||||| |||||| ||||| ||||||||||||||||| |  |||||||| ||||||||| |||||||||||||||| ||| |||||||    
T  26295201 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaagtgtttttccttctatccttattgaataagtgatttaacaaattttct 26295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 34431045 - 34431136
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||| |||||| ||||||||||||||||||| | | | ||||||||  ||||||  |||||||||||||||||||||||||||||||||    
T  34431045 tgatttagggtcaattttgacccaaaaatcacccattcgaattgttttttcttctattttaattgaataagtgatttcacatattttctgtt 34431136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 333 - 430
Target Start/End: Original strand, 20483165 - 20483262
Alignment:
Q  333 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaatt-gaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| | |||| ||||||||||||||||||| ||| | ||||||||| || ||| |||||| ||||||||||||||||||||||||||||    
T  20483165 gaggggtgatttaggatcaattttgacccaaaaatcaccc-tccaaattgtttttccttttattctaatttgaataagtgatttcacatattttctgtt 20483262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 3740336 - 3740433
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| |||||||| ||| || |||||| ||||||||| || ||  | ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  3740336 agaggtgtgatttagggttaattttgactcaaaaatcatccatctgaattgttttcc-ttctatcctaattgaataagtgatttcacatattttctgtt 3740433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 39179939 - 39179873
Alignment:
Q  364 aaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| | || |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  39179939 aaatcacccctccgaattatttttccttctattctaattgaataagtgatttcacatattttctgtt 39179873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 430
Target Start/End: Complemental strand, 12439771 - 12439679
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| ||  || ||||||| ||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  12439771 ggtgatttagggataattttgacctaaaaatcaccc-tccgaattgtttttcattctatcctagttgaataagtgatttcatatattttttgtt 12439679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 23882259 - 23882166
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||||||||||| |||||| |||||  ||||||||| |  ||| | ||||||||| |||||||| ||||||||||||||||| |||||||||    
T  23882259 agaggggtgatttagggtcaattttgattcaaaaatcatcaatccaaattgtttttctttctatccaaattgaataagtgatttgacatatttt 23882166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 981164 - 981076
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattt 424  Q
    |||||||||| | |||| |||||||||| |||| ||||||| | ||||||||| ||||||| ||||||||  |||||||||||||||||    
T  981164 gggtgatttaggatcaattttgacccaataatcgcccctccgagttgtttttccttctatcataattgaacgagtgatttcacatattt 981076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 39531540 - 39531454
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattt 424  Q
    |||||||||| |||||| |||||||||||| ||| |||||| | ||||||| | ||||||| |||||||||||||||||||||||||||    
T  39531540 gggtgatttaaggtcaattttgacccaaaa-tcatccctccgagttgttttcc-ttctatcgtaattgaataagtgatttcacatattt 39531454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 426
Target Start/End: Complemental strand, 6682013 - 6681923
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    ||||||||||  |||||||||| |||||||||||| | | | | ||||||||| || ||||  ||||||||||||||||||||||||||||    
T  6682013 gggtgatttagagtcaaatttggcccaaaaatcactcattcgagttgtttttccttttatctgaattgaataagtgatttcacatattttc 6681923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 428
Target Start/End: Complemental strand, 3079413 - 3079352
Alignment:
Q  367 tcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    |||||||||| ||||||||||| || |||| |||||||||||||||||| ||||||||||||    
T  3079413 tcacccctccgatttgtttttccttatatcataattgaataagtgatttaacatattttctg 3079352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 7771949 - 7771888
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattct 393  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||    
T  7771949 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttct 7771888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 12891706 - 12891752
Alignment:
Q  384 ttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||    
T  12891706 ttttccttttatcctaattgaataagtgatttcacatattttctgtt 12891752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 426
Target Start/End: Original strand, 17687214 - 17687277
Alignment:
Q  363 aaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||||  ||| | ||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  17687214 aaaatcaccaatccgagttgtttttccttctatcttaattgaataagttatttcacatattttc 17687277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 430
Target Start/End: Complemental strand, 42396640 - 42396557
Alignment:
Q  347 ggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| |||||||||||||||| |  | | | || |||||  ||||||| |||||||||||| ||||||||||||||| ||||    
T  42396640 ggtcaattttgacccaaaaatcatcttttcgaattattttttcttctatcttaattgaataagcgatttcacatattttttgtt 42396557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 18653808 - 18653856
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    ||||||||  || ||||||||||||||||||||||||  ||||||||||    
T  18653808 ttgttttttcttatatcctaattgaataagtgatttcgtatattttctg 18653856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 41361712 - 41361808
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  41361712 aggggtgatttatggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccgtaattgaataagtgatttcacatattttctgtt 41361808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 425
Target Start/End: Original strand, 37612631 - 37612724
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | || |||||| |||||||||| |||||||||||||||||||||||||    
T  37612631 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattttttttccttctatcctagttgaataagtgatttcacatatttt 37612724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 428
Target Start/End: Complemental strand, 1810370 - 1810275
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||| |||||||    
T  1810370 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttttttttc-ttctatcctaattcaataagtgatttcacattttttctg 1810275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 10147924 - 10148023
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttca-ttctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| | ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  10147924 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttcttctatcctaattgaataagtgatttcacatattttctgtt 10148023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 2025360 - 2025262
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||| | ||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  2025360 agaggggtgatttatggtcaattttgaccaaaaaatcacccttccaagttgtttttccttttattctaattgaataagtgatttcacatgttttctgtt 2025262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 10338969 - 10338875
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| |||||| |||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||| ||||    
T  10338969 gggtgatttaaggtcaattttgacgcaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacatattttttgtt 10338875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 24791319 - 24791221
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||| |||||||||||||||| || ||| | ||||||||| || |||||||||| |||||||||||| ||||||||||||||    
T  24791319 agaggggtgatttatggtcaattttgacccaaaaatcatccatccgaattgtttttccttatatcctaattcaataagtgatttaacatattttctgtt 24791221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 30027031 - 30026933
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||  ||||||||||||||||||| ||| | ||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  30027031 agaggggtgatttagggtcatttttgacccaaaaatcacccatccgagttgttttttcttctatcataattgaataagtgatttcacatattttctgtt 30026933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 39067840 - 39067742
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||||||||||   ||| | ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  39067840 agaggggtgatttaaggtcaattttgacccaaaaatcactgttccaaattgtttttccttctatcctaatttaataagtgatttcacatattttctgtt 39067742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 14600849 - 14600751
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| ||||||||| |||||| |||||||||||||||| || ||| | ||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  14600849 agagaggtgatttagggtcaattttgacccaaaaatcatccatccgagttgttttttcttctatcctaattgaataactgatttcacatattttctgtt 14600751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 31202440 - 31202534
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| |||||||||||||||| || ||| | ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  31202440 gggtgatttaaggtcaattttgacccaaaaatcatccatccaaattgtttttctttctattataattgaataagtgatttcacatattttctgtt 31202534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 430
Target Start/End: Original strand, 9501572 - 9501666
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| |||||| ||||| ||||||||||||| ||  | |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9501572 ggtgatttagggtcaattttgatccaaaaatcacccatctgaattgttttttccttctatcctaattgaataagtgatttcacatattttctgtt 9501666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 426
Target Start/End: Original strand, 11161860 - 11161954
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||| ||||| |||||| ||||||||||||||||||||| | | ||||||||| || |||||||||||||||||| ||||||||| |||||    
T  11161860 agaggggtaatttagggtcaattttgacccaaaaatcaccccttcaagttgtttttctttatatcctaattgaataagtcatttcacatcttttc 11161954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 31407899 - 31407801
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||||||||| | |||| | ||||||||| ||||||| || |||||||| |||||||||||||||| ||||    
T  31407899 agaggggtgatttagggtcaattttgacccaaaaatcatctctccgaattgtttttccttctatcatagttgaataaatgatttcacatattttttgtt 31407801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 427
Target Start/End: Complemental strand, 13570877 - 13570782
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    ||||||||||||||  ||||| ||||| | ||||||||  | ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13570877 agaggggtgatttagagtcaattttgatctaaaaatcattcatcccaattgtttttcattctatcctaattaaataagtgatttcacatattttct 13570782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 2234617 - 2234523
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||| || ||| || ||||| ||||||||||||||| | | ||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  2234617 gggtgatctagggttaattttgatccaaaaatcaccccttcgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtt 2234523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 12329608 - 12329702
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||  ||||| ||||| ||||||||||||  | | | ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  12329608 gggtgatttagagtcaattttgatccaaaaatcaccatttcgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 12329702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 428
Target Start/End: Complemental strand, 1040037 - 1039948
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    ||||||| |||||| ||||| ||||||||||||| ||| | ||| ||||| |||||| |||||| |||||||||||||||||||||||||    
T  1040037 tgatttaaggtcaattttgatccaaaaatcacccatccgaattggttttccttctattctaattcaataagtgatttcacatattttctg 1039948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 23971245 - 23971147
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| |||||||||  || || ||||||| ||||||||| | ||| | ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  23971245 agagaggtgatttaaagtaaattttgaccaaaaaatcactcatccgagttgtttttccttctattctaattgaataagtgatttcacatattttatgtt 23971147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 24699812 - 24699908
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcat--tctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||||||||||||||||| ||| |  |||||||  |  | |||||||||| |||||||||||||||||||||||||||    
T  24699812 gggtgatttagggtcaattttgacccaaaaatcacccatccgagatgttttttttcttatatcctaattaaataagtgatttcacatattttctgtt 24699908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 31308120 - 31308224
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatt------tgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||||||||||| |||||| ||||| | |||||||||| |||| | |      |||||||| ||||||||||||||||||||||||||||||||||||    
T  31308120 agaggggtgatttaaggtcaattttgatctaaaaatcacctctccgactccgagttgtttttccttctatcctaattgaataagtgatttcacatatttt 31308219  T
Q  426 ctgtt 430  Q
     ||||    
T  31308220 atgtt 31308224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 430
Target Start/End: Complemental strand, 3204899 - 3204809
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||  ||||| |||||||||||||| |||| ||| | |||||||||  ||||| |||||| ||| |||||||||||||||||||||||    
T  3204899 tgatttagagtcaattttgacccaaaaattaccc-tccgaattgtttttccatctattctaatttaatgagtgatttcacatattttctgtt 3204809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 430
Target Start/End: Complemental strand, 15288926 - 15288851
Alignment:
Q  355 ttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| ||||||||| |||| | | ||||||||| ||||||||||||| |||| |||||||||| |||||||||||    
T  15288926 ttgactcaaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcacttattttctgtt 15288851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 430
Target Start/End: Complemental strand, 15469295 - 15469220
Alignment:
Q  355 ttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| ||||||||| |||| | | ||||||||| ||||||||||||| |||| |||||||||| |||||||||||    
T  15469295 ttgactcaaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcacttattttctgtt 15469220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 37128589 - 37128539
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  37128589 ttgtttttccttctatcctagttgaataagtgatttcacatattttttgtt 37128539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 425
Target Start/End: Complemental strand, 30039476 - 30039389
Alignment:
Q  338 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt-cacatatttt 425  Q
    ||||||||||||||| |||||||| |||||||| | ||| | ||||||||| |||| | ||||||||||| ||||||| ||||||||||    
T  30039476 gtgatttatggtcaattttgaccc-aaaatcactcatccgaattgtttttccttcttttctaattgaatatgtgatttccacatatttt 30039389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 4757191 - 4757241
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| ||||||| ||||| ||||| |||||||||||||||||||||    
T  4757191 ttgtttttccttctatcataattaaataaatgatttcacatattttctgtt 4757241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 425
Target Start/End: Original strand, 10334159 - 10334245
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    ||||||| |||||| ||||| ||||||||||| | |   | ||||||||| ||||||||||||| ||||||||| |||| |||||||    
T  10334159 tgatttagggtcaattttgatccaaaaatcactcatatgagttgtttttccttctatcctaattaaataagtgagttcatatatttt 10334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 393 - 430
Target Start/End: Complemental strand, 7579945 - 7579908
Alignment:
Q  393 tatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| |||||||||||||||||||||||||||||||||    
T  7579945 tatcttaattgaataagtgatttcacatattttctgtt 7579908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 7583915 - 7583859
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttc 388  Q
    |||||||||||||| | |||| ||||||||||||||||||| ||| | |||||||||    
T  7583915 agaggggtgatttaggatcaattttgacccaaaaatcacccatccgagttgtttttc 7583859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 22787528 - 22787568
Alignment:
Q  390 ttctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  22787528 ttctatcctagttgaataagtgatttaacatattttctgtt 22787568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 13576326 - 13576257
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaatt 402  Q
    |||||||||||||| | |||| ||||||| |||| ||| |||||| | ||||||||| |||||||||||||    
T  13576326 agaggggtgatttaggatcaattttgacctaaaa-tcatccctccgagttgtttttctttctatcctaatt 13576257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 425
Target Start/End: Original strand, 2968513 - 2968603
Alignment:
Q  338 gtgatttatggtcaaatttgacccaaaaatcacc---cctcctatttgtttttcattctatcctaattgaataagtga-tttcacatatttt 425  Q
    ||||||||||||||| |||||| | |||||||||   ||||| | ||||||||| || ||| |||||| ||||||||| |||||||||||||    
T  2968513 gtgatttatggtcaattttgactc-aaaatcacctctcctccgagttgtttttctttatattctaattaaataagtgattttcacatatttt 2968603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 28297230 - 28297169
Alignment:
Q  361 caaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatat 422  Q
    ||||||||||| |||| | ||||||||| |||| | |||||||||| |||||||||| ||||    
T  28297230 caaaaatcaccgctccgagttgtttttccttcttttctaattgaattagtgatttcatatat 28297169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 42603912 - 42603814
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| |||||||||||||||| |||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42603912 agagcggtgatttatggtcaattttgactcaaaaatcacccctccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgtt 42603814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 5684345 - 5684441
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| |||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5684345 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 5684441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 5709395 - 5709491
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| |||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5709395 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 5709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 28665051 - 28664957
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| |||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28665051 gggtgatttagggtcaattttgaccctaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 28664957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 17473863 - 17473768
Alignment:
Q  335 ggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  17473863 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 17473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 17579351 - 17579446
Alignment:
Q  335 ggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  17579351 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 17579446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 429
Target Start/End: Original strand, 11832996 - 11833094
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccc-tcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgt 429  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||| | ||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  11832996 agagggatgatttatggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctttcctaattgaataagtgatttcacatattttctgt 11833094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 9785297 - 9785393
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  9785297 aggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcttaattgaataagtgatttcacatattttttgtt 9785393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 45457699 - 45457601
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||| |||||||||| ||||| | ||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  45457699 agaggggtgatttagggtcaattttgacgcaaaaatcactcctccgaattgtttttccttctatcttaattgaataagtgatttcacatattttatgtt 45457601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 334 - 430
Target Start/End: Complemental strand, 22747648 - 22747553
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| ||||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  22747648 aggggtgatttagggtcaattttgacccaaaaatcacccctccaagttg-ttttccttctatcctaattgaataagtgatttgacatattttatgtt 22747553  T

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Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 21603441 - 21603538
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||| ||||| ||||||||  | ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  21603441 agaggggtgatttagggtcaattttgacc-aaaaagcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacatattctctgtt 21603538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 36579455 - 36579357
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||| |||||| |||||||| |||||||||||||| | ||||||||| |||||||||| |||||||||||||| |||||||||| ||||    
T  36579455 agagggatgatttagggtcaattttgacccgaaaatcacccctccgaattgtttttccttctatcctagttgaataagtgattccacatattttttgtt 36579357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 39533114 - 39533020
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| |||||||||||||||| | |||  | ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  39533114 gggtgatttagggtcaattttgacccaaaaatcatctctctgaattgtttttccttctatcttaattgaataagtgatttcacatattttctgtt 39533020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 46026172 - 46026074
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| ||||||||||||||||||||| |||| ||||||||| ||||    
T  46026172 agaggggtgatttagggtcaattttgacccaaaaatcacacatccgaattgtttttccttctatcctaattgaataagttatttaacatattttttgtt 46026074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 48304538 - 48304440
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| | ||| ||||| | |||||||||||||||||||||||||| | ||||||||||    
T  48304538 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgcttttcctgctatcctaattgaataagtgatttcatagattttctgtt 48304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 425
Target Start/End: Original strand, 45482042 - 45482135
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    ||||| |||||||| |||||| |||||||| |||||||||||||| |  |||||||| ||||||||||||| ||||||||||||||||||||||    
T  45482042 agaggagtgatttagggtcaattttgaccccaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacatatttt 45482135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 6667373 - 6667472
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaa-ttgaataagtgatttcacatattttctgtt 430  Q
    ||||| |||||||| |||||| |||||||||||||||||||| || | ||||||||  |||||| |||| ||||||||||||||||||||||||||||||    
T  6667373 agaggagtgatttagggtcaattttgacccaaaaatcaccccaccgaattgttttttcttctattctaatttgaataagtgatttcacatattttctgtt 6667472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 21990639 - 21990738
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||| | |||||||| | | ||||||||||||||||||||||||||||||| |||||||    
T  21990639 agaggggtgatttagggtcaattttgactgaaaaatcacccctccgaattgttttttcctgctatcctaattgaataagtgatttcacatatattctgtt 21990738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 1281276 - 1281182
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||| | ||||||| ||||||||||| ||| | |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  1281276 gggtgatttagggtccattttgaccaaaaaatcacccatccgaattgtttttcattatattctaattgaataagtgatttcacatattttttgtt 1281182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 10574363 - 10574457
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| |||||| |||||||||||||||| | ||||||||| || ||||||||||||||||  ||||| ||||||||||||||    
T  10574363 gggtgatttagggtcaattttgactcaaaaatcacccctccgaattgtttttccttttatcctaattgaataaacgattttacatattttctgtt 10574457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 17509346 - 17509249
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||| |||||| ||||||| ||||||||||| ||| | || |||||| || ||||||||||||||||||||||||||||||||||||||    
T  17509346 agagggatgatttagggtcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacatattttctgtt 17509249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 17543868 - 17543965
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||| |||||| ||||||| ||||||||||| ||| | || |||||| || ||||||||||||||||||||||||||||||||||||||    
T  17543868 agagggatgatttagggtcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacatattttctgtt 17543965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 3266360 - 3266464
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt------cattctatcctaattgaataagtgatttcacatatttt 425  Q
    ||||||||||||||||||||| ||||| |||| ||||| |||||| | ||||||||      | ||||||||||||||||||||||||||||||||||||    
T  3266360 agaggggtgatttatggtcaattttgatccaataatcatccctccgagttgttttttttcttccttctatcctaattgaataagtgatttcacatatttt 3266459  T
Q  426 ctgtt 430  Q
    |||||    
T  3266460 ctgtt 3266464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 41287935 - 41288034
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctccta-tttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||| |||||||| ||| | |   |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  41287935 agaggggtgatttagggtcaattttgacccaataatcacccatccgagtgattttttccttctatcctaattgaataggtgatttcacatattttctgtt 41288034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 27535434 - 27535524
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatat 422  Q
    |||||||||||||| |||||| ||| | ||||||||||||| ||| | ||||||||| |||||| ||||||| ||||||||||||||||||    
T  27535434 agaggggtgatttagggtcaatttttatccaaaaatcacccatccgaattgtttttccttctattctaattgtataagtgatttcacatat 27535524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 42644654 - 42644752
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| | |||| |||||| |||||||||| | |   | ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  42644654 agaggggtgatttaggatcaattttgactcaaaaatcactcatttgaattgtttttccttctatcctaattgaataagtgatttcacatattctctgtt 42644752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 32740734 - 32740829
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaa-atcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||  ||||| ||||||| |||| ||||||||  | | ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  32740734 gggtgatttagagtcaattttgaccaaaaaaatcaccccctcgaattgtttttccttctatcctaattgaataagtgatttcacatattttttgtt 32740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 430
Target Start/End: Original strand, 2622586 - 2622668
Alignment:
Q  348 gtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| ||||||||||||||||| | ||| | ||||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  2622586 gtcaattttgacccaaaaatcacgcatccgaattgtttttccttctatcttaattgaataagtaatttcagatattttctgtt 2622668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 43847083 - 43847146
Alignment:
Q  367 tcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| | ||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  43847083 tcacccctccgaattgtttttcctcttatcctaattgaataagtgatttcacatattttctgtt 43847146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 10094467 - 10094517
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  10094467 ttgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 10094517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 15674707 - 15674657
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  15674707 ttgtttttcctcctatcctaattgaataagtgatttcacatattttctgtt 15674657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 430
Target Start/End: Complemental strand, 24320357 - 24320268
Alignment:
Q  341 atttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| |||||| |||||| |||||||||| | | | | ||||||||| ||||||| ||||| |||||||||||||||||||||| ||||    
T  24320357 atttaaggtcaattttgactcaaaaatcactcattcgagttgtttttccttctatcttaatttaataagtgatttcacatattttttgtt 24320268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 21954957 - 21954878
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 416  Q
    |||||||||| |||||| ||| |||||||| |||| | ||| | ||||||||||||||||||||||| ||||| |||||||    
T  21954957 gggtgatttagggtcaattttaacccaaaa-tcactcatccgagttgtttttcattctatcctaattaaataaatgatttc 21954878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 39707272 - 39707351
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 416  Q
    |||||||||| |||||| |||||||||||| ||| | |||| | ||||||||| ||||||||||||| ||||||| |||||    
T  39707272 gggtgatttagggtcaattttgacccaaaa-tcatcactccgagttgtttttctttctatcctaattaaataagttatttc 39707351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 430
Target Start/End: Complemental strand, 9720103 - 9720019
Alignment:
Q  340 gatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| |||||| |||||||      ||| | ||||||||  || |||| |||||||||||||||||||||||||||||||||    
T  9720103 gatttatggtcaattttgactcaaaaat------tccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtt 9720019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 36719680 - 36719628
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttc 388  Q
    |||||||||| |||||| ||||| ||||||||||||||||| | |||||||||    
T  36719680 gggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttc 36719628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 40761567 - 40761611
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcc 376  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||    
T  40761567 agagggatgatttagggtcaattttgacccaaaaatcacccctcc 40761611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 32643014 - 32643088
Alignment:
Q  356 tgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| | ||||   ||| ||||||  ||||| | |||||||| ||||||||||||||||||||||||    
T  32643014 tgacccaaaaataatccctttgattcgttttttcttctaccttaattgaacaagtgatttcacatattttctgtt 32643088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Complemental strand, 14657917 - 14657876
Alignment:
Q  381 tgtttttcattctatcctaattgaataagtgatttcacatat 422  Q
    |||||||| ||||||| ||||||||||||| |||||||||||    
T  14657917 tgtttttccttctatcttaattgaataagttatttcacatat 14657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 36691950 - 36691852
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  36691950 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttatttttccttctatcctaattgaataagtgatttcacatattttctgtt 36691852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 48652591 - 48652493
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  48652591 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 48652493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 11819061 - 11819159
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||| ||||    
T  11819061 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttatgtt 11819159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 3456921 - 3457019
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| | ||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  3456921 agaggggtgatttatggtcaattttgatccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttaacatattttttgtt 3457019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 14585440 - 14585538
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||  ||||| ||||||||||||||||| ||||  | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14585440 agaggggtgatttagagtcaattttgacccaaaaatcactcctctaaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 14585538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 31462897 - 31462799
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  31462897 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgattttacatattttctgtt 31462799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 32080901 - 32080807
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||||||||||    
T  32080901 gggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataggtgatttcacatattttctgtt 32080807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 13702123 - 13702025
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||||| |||||||| | | || |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  13702123 agaggggtgatttagggtcaattttgacccaaaagtcaccccttcgaattatttttctttctatcataattgaataagtgatttcacatattttctgtt 13702025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 31270308 - 31270402
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||||||||||||||||||| | | || |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  31270308 gggtgatttagggtcaattttgacccaaaaatcaccccttcgaattatttttccttctatcctaattgaataagtgatttcacatattttatgtt 31270402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 30156432 - 30156340
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||| ||||| || |||||||||||||||||||||||||||||||||    
T  30156432 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg-ttttccttttatcctaattgaataagtgatttcacatatttt 30156340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 334 - 430
Target Start/End: Complemental strand, 54239167 - 54239071
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| ||| |||||||| | ||||||||| | ||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54239167 aggggtgatttaaggttaaatttgatcaaaaaatcacacatccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 54239071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 34961009 - 34960911
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||  | ||||||||  |||||| ||||||||||||||||||||||||||||| ||||    
T  34961009 agaggggtgacttagggtcaattttgacccaaaaatcacccctcagaattgttttttcttctattctaattgaataagtgatttcacatattttatgtt 34960911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 53155581 - 53155483
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||| | | | ||||||||| || |||||||||| |||||||||||||||||||||| ||||    
T  53155581 agaggggtgatttagggtcaattttgacccaaaaatcacccattcgaattgtttttccttatatcctaattcaataagtgatttcacatattttatgtt 53155483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 55090734 - 55090636
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| ||| || ||  ||||||||||||||||||| ||||||||||| ||||| | ||||| |||||||||||||||||||||||||||    
T  55090734 agaggggtgatttagggttaatttcaacccaaaaatcacccctccgatttgtttttccttctaccttaattaaataagtgatttcacatattttctgtt 55090636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 4206662 - 4206569
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||| | |||||||||  | ||||||||||||||||||| |||||||||||||    
T  4206662 agaggggtgatttatggtcaattttgatcaaaaaatcacccctccgaattgtttttccatatatcctaattgaataagtgttttcacatatttt 4206569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 49628239 - 49628140
Alignment:
Q  332 agaggggtgatttatgg-tcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| ||| |||| ||||||| ||||||||||||||  | ||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  49628239 agaggggtgatttttgggtcaattttgacctaaaaatcacccctctgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtt 49628140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 1075044 - 1074962
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatt 414  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||| || ||| ||||||||||||||||||    
T  1075044 agaggggtgatttatggtcaattttgacccaaaaatcacccatccgagttgtttttccttatattctaattgaataagtgatt 1074962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 36624845 - 36624747
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| | ||||||   ||||||||||||||||| ||| | ||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  36624845 agaggggtgattcagggtcaatcatgacccaaaaatcacccatccgaattgtttttccttctatcctaactaaataagtgatttcacatattttctgtt 36624747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 39610182 - 39610288
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttt--------ttcattctatcctaattgaataagtgatttcacatatt 423  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| | ||||||        ||| ||||||||||||||||||||||||||||||||||    
T  39610182 agaggggtgatttatggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatatt 39610281  T
Q  424 ttctgtt 430  Q
    || ||||    
T  39610282 ttttgtt 39610288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 35174684 - 35174780
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||| | |||||| || ||||||||||||||||||   | ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  35174684 aggggttattaagggtcaatttcgacccaaaaatcacccctttgaattgtttttccttctatcctaattgaataagtgatttcacatattttttgtt 35174780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 24483813 - 24483731
Alignment:
Q  348 gtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| |||||| || ||||||||| ||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24483813 gtcaattttgacacacaaatcacccatctgaattgtttttcattctatcataattgaataagtgatttcacatattttctgtt 24483731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 27189545 - 27189447
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||  ||||| ||||| |||||||| || | ||| | ||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  27189545 agaggggtgatttagagtcaattttgatccaaaaattactcttccgaattgtttttccttctatcctaattgaataagtaatttcacataatttctgtt 27189447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 38527241 - 38527339
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| | ||||  |||| ||||||||||| | ||| | ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  38527241 agaggggtgatttaggatcaatcttgaaccaaaaatcacacatccaaattgtttttccttctatcttaattgaataaatgatttcacatattttctgtt 38527339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 430
Target Start/End: Complemental strand, 40013421 - 40013325
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcct---aattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||  ||||| ||||||||||||||||||| | | | ||||||||| |||||||||   ||||||||||||||||||||||||||||||||    
T  40013421 ggtgatttagtgtcaattttgacccaaaaatcacccattcgaattgtttttccttctatcctcctaattgaataagtgatttcacatattttctgtt 40013325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 48400877 - 48400975
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||  | ||||||||| ||||| |||| || |||||||||||||||||||||| ||||    
T  48400877 agaggggtgatttagggtcaattttgacccaaaaatcacacatcggaattgtttttccttctaccctattttaataagtgatttcacatattttttgtt 48400975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 22484965 - 22485041
Alignment:
Q  354 tttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||| | |||   ||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  22484965 tttgacccaaaaatcactcttccggattgtttttccttctatcctaattgaataagtgatttcgcatattttctgtt 22485041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 19645203 - 19645297
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||||| ||||| || || ||| | ||||||||  |||| |||||||| |||||||||||||||||||||||||||    
T  19645203 gggtgatttagggtcaattttgacctaaaaaccatccatccgaattgttttttcttctgtcctaattaaataagtgatttcacatattttctgtt 19645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 334 - 430
Target Start/End: Complemental strand, 40884018 - 40883921
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| |||||||||||||||| |  | | | |||||||| | || |||||||||||||||||||||||||| |||||||||||    
T  40884018 aggggtgatttagggtcaattttgacccaaaaatcatcaattcgaattgttttttccttttatcctaattgaataagtgatttcacttattttctgtt 40883921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 53402614 - 53402691
Alignment:
Q  338 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt 415  Q
    |||||||| |||||| ||||||||||||||||||| ||| | ||||||||| |||||| |||||| ||||||||||||    
T  53402614 gtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttccttctattctaattcaataagtgattt 53402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 41868394 - 41868347
Alignment:
Q  383 tttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  41868394 tttttccttctatcctaattgaataagtgatttcacatattttctgtt 41868347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 4817949 - 4817886
Alignment:
Q  364 aaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||| |||||||| | ||||||||| || ||||||||||||||| |||||||||||||||||||    
T  4817949 aaattacccctccaaattgtttttctttttatcctaattgaataggtgatttcacatattttct 4817886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 4512893 - 4512853
Alignment:
Q  221 aatgggtcaaacataatttaaagtgaagcgaccaaataact 261  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  4512893 aatgggttagacataatttaaagtgaagcgaccaaataact 4512853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 33637427 - 33637479
Alignment:
Q  378 atttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||| ||||| | |||||||||||  ||||||||||||||||||||    
T  33637427 atttgtttttccttctaccttaattgaataaaagatttcacatattttctgtt 33637479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 34103802 - 34103770
Alignment:
Q  398 taattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||||||||||||||||||||||    
T  34103802 taattgaataagtgatttcacatattttctgtt 34103770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 2147756 - 2147799
Alignment:
Q  384 ttttcattctatcctaattgaataagtgattt-cacatattttc 426  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  2147756 ttttcgttctatcctaattgaataagtgatttccacatattttc 2147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 19861428 - 19861333
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| ||||||||| |||||| |||||| |||||||||||| |   | |||||| || |||  || ||||||||||||||||||||||||||| |||||    
T  19861428 agagaggtgatttagggtcaattttgactcaaaaatcacccatg--agttgtttgtccttcc-tcataattgaataagtgatttcacatatttcctgtt 19861333  T

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Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 425
Target Start/End: Complemental strand, 106139 - 106093
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtga-tttcacatatttt 425  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  106139 ttgtttttcattctaccctaattaaataagtgattttcacatatttt 106093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 48854889 - 48854939
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt 387  Q
    ||||||||  |||||| ||| ||||||||||||||||||| ||||||||||    
T  48854889 ggtgattttgggtcaattttaacccaaaaatcacccctccgatttgttttt 48854939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 375
Target Start/End: Original strand, 49628194 - 49628238
Alignment:
Q  332 agaggggtgatttat-ggtcaaatttgacccaaaaatcacccctc 375  Q
    ||||||||||||| | ||||||| |||||||||||||||||||||    
T  49628194 agaggggtgatttttaggtcaaaattgacccaaaaatcacccctc 49628238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 54706788 - 54706724
Alignment:
Q  364 aaatcacccctcctatttgtttttcattctat-cctaattgaataagtgatttcacatattttct 427  Q
    |||| |||||||| | ||||||||| || ||| || |||| ||||||||||||||||||||||||    
T  54706788 aaattacccctccaaattgtttttccttttattcccaattcaataagtgatttcacatattttct 54706724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 17268267 - 17268169
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||| |||||||||||||||| |||| | | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17268267 agaggggtgatttatggtcaattttgacccaaaaatcatcccttcgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 17268169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 9690116 - 9690018
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  9690116 agaggggtgatttaaggtcaaatttgacccaaaaatcacccctccgaactgtttttccttctatcctaattgaataagtgatctcacatattttttgtt 9690018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 12704665 - 12704763
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  12704665 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgatttcacatattttctgtt 12704763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 25067830 - 25067928
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  25067830 agagaggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctattttaattgaataagtgatttcacatattttctgtt 25067928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 43474271 - 43474173
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| | ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  43474271 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacaaattttctgtt 43474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 44942267 - 44942361
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  44942267 gggtgatttatggtcaattttgacccaaaaatcacccctccgagttgttttttcttctatcctaattgaataagtgatttcacatattttatgtt 44942361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 11938002 - 11937903
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  11938002 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcctttctatcctaattgaataagtgatttcacatattttttgtt 11937903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 426
Target Start/End: Original strand, 15919852 - 15919946
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15919852 agaggggtgatttagagtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataaatgatttcacatattttc 15919946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 20561275 - 20561177
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||||||| ||| ||||||||| ||||||||||||||||||    
T  20561275 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccaaatcgaataagtggtttcacatattttctgtt 20561177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 22597113 - 22597211
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| | ||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  22597113 agaggggtgatttaaggtcaattttgacccaaaaatcatccctccgagttgtttttccttctatcctaattaaataagtgatttcacatattttttgtt 22597211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 27095687 - 27095781
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  27095687 gggtgatttagggtcaattttgacctaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttttgtt 27095781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 5754266 - 5754364
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| | ||||||||| |||||||||| |||||||| |||||||||||||||| ||||    
T  5754266 agaggggtgatttagggtcaattttgacccaaaaatcatccctccgaattgtttttccttctatcctagttgaataaatgatttcacatattttttgtt 5754364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 9978812 - 9978714
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| || |||| ||||||||||| |||||||||||||||||||||    
T  9978812 agaggggtgatttaaggtcaattttgacccaaaaatcaccccttcaaattgtttttccttttatcttaattgaataaatgatttcacatattttctgtt 9978714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 18089535 - 18089437
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||| ||||||||||| ||||| | ||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  18089535 agaggggtgatttagggtcaattttgatccaaaaatcactcctccgaattgttttttcttatatcctaattgaataagtgatttcacatattttctgtt 18089437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 430
Target Start/End: Complemental strand, 13740801 - 13740705
Alignment:
Q  333 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| |||||||||||||  |||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  13740801 gagggatgatttatggtcat-tttgacccaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttcatatattttctgtt 13740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 426
Target Start/End: Original strand, 33012059 - 33012149
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  33012059 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctattctaattgaataagtgatttcacatattttc 33012149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 38535448 - 38535350
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||| |||||||   | || |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  38535448 agaggggtgatttagggtcaattttgacccaaaaagcacccctttgaattttttttccttctatcataattgaataagtgatttcacatattttctgtt 38535350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 35333490 - 35333581
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||| | |||| |||||||||||||||||||||   | ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  35333490 tgatttaggatcaattttgacccaaaaatcacccctaagaattgtttttcctgctatcctaattgaataagtgatttcacatattttctgtt 35333581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 36867986 - 36868081
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||||||||||| |||||| |||||| |||||||||||||||  | ||||||||| |||||| |||||| |||||| |||||||||||||||||    
T  36867986 agaggggtgatttagggtcaattttgactcaaaaatcacccctctgaattgtttttccttctattctaattcaataagcgatttcacatattttct 36868081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 430
Target Start/End: Original strand, 4739310 - 4739405
Alignment:
Q  333 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| ||||||  ||||||| |||||||||||||| | ||||||||| ||| ||||||||| ||||||| |||||||||||||||||||    
T  4739310 gaggggtgatttagggtcaa--ttgaccccaaaatcacccctccgagttgtttttccttccatcctaattaaataagtaatttcacatattttctgtt 4739405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 34416904 - 34416810
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||| |||| || |||||| ||||||| |||||||| |||||| | ||||||||| || ||||||||||||||||||||||||||||||||||    
T  34416904 agagggatgatctaaggtcaattttgaccaaaaaatcatccctccgaattgtttttccttatatcctaattgaataagtgatttcacatattttc 34416810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 38384585 - 38384487
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||  |||||| |||||||||||||||||  |||| ||||||||||| || || ||||||||||||||||||||||||| |||| ||||    
T  38384585 agaggggtgattttgggtcaattttgacccaaaaatcacatctccgatttgtttttccttataccctaattgaataagtgatttcacattttttttgtt 38384487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 32015198 - 32015300
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaat----tgaataagtgatttcacatattttct 427  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| || |||| ||||    | ||||||||||||||||||||||||    
T  32015198 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttatatcataattcaataaataagtgatttcacatattttct 32015297  T
Q  428 gtt 430  Q
    |||    
T  32015298 gtt 32015300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 428
Target Start/End: Complemental strand, 4604446 - 4604354
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    |||||||||| |||||| |||||||||||||| || | | | | ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  4604446 gggtgatttaaggtcaattttgacccaaaaattactcattcgagttgtttttccttctattctaattgaataagtgatttcacatattttctg 4604354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 7073091 - 7072993
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||| ||| | | | ||| ||||| ||||||||||||||||||||| | |||||| ||||||||||    
T  7073091 agaggggtgatttagggtcaattttgacccaaaaatcgccctttcgaattggttttccttctatcctaattgaataagtaacttcacaaattttctgtt 7072993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 31908959 - 31908861
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| |||||||  ||||| ||||| ||||||||||||| ||| | ||||||||  || ||||||| ||||||||||||||||||||||||||||||    
T  31908959 agagggatgatttagagtcaattttgatccaaaaatcacccttccgaattgttttttcttttatcctagttgaataagtgatttcacatattttctgtt 31908861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 34963208 - 34963111
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||| ||||  |||||| ||||||| ||||||||||| ||  ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  34963208 agaggggtaattttgggtcaattttgacctaaaaatcaccc-tctgatttgtttttccttctaccctaattgaataagtgatttcacattttttctgtt 34963111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 13879157 - 13879051
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt--------cattctatcctaattgaataagtgatttcacatatt 423  Q
    |||||| ||||||| |||||| |||||||||| |||||||||||| | ||||||||        | ||||||||||||||||||||||||||||||||||    
T  13879157 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatatt 13879058  T
Q  424 ttctgtt 430  Q
    |||||||    
T  13879057 ttctgtt 13879051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 14019282 - 14019176
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt--------cattctatcctaattgaataagtgatttcacatatt 423  Q
    |||||| ||||||| |||||| |||||||||| |||||||||||| | ||||||||        | ||||||||||||||||||||||||||||||||||    
T  14019282 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatatt 14019183  T
Q  424 ttctgtt 430  Q
    |||||||    
T  14019182 ttctgtt 14019176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 430
Target Start/End: Complemental strand, 4426755 - 4426703
Alignment:
Q  378 atttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  4426755 atttgtttttccttctatcctaattgaataaatgatttcacatattttctgtt 4426703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 34470952 - 34471039
Alignment:
Q  342 tttatggtcaaatttgacccaaaaatcac--ccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||| |||||| |||||||||||||||||  |||||| | |||||| || ||||||| ||||||||| ||||||||||||||||||||    
T  34470952 tttagggtcaattttgacccaaaaatcacacccctccgaattgtttatctttctatcttaattgaatcagtgatttcacatattttct 34471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 430
Target Start/End: Complemental strand, 10287133 - 10287051
Alignment:
Q  347 ggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||  ||||||||||||||| | |||  |||| || ||||||||||||||||||||||||||||||||||||||    
T  10287133 ggtcaattttgacataaaaatcacccctccgaattgcatttcttt-tatcctaattgaataagtgatttcacatattttctgtt 10287051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 4732059 - 4732147
Alignment:
Q  342 tttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| |||||| |||||| |||||||||||| |  || |||  |||| |||||||||||||||||||||||||||||||| ||| ||||    
T  4732059 tttagggtcaattttgactcaaaaatcacccttgttagttgcatttccttctatcctaattgaataagtgatttcacatactttttgtt 4732147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 28231240 - 28231142
Alignment:
Q  332 agaggggtgatttatgg-tcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| ||| | ||| ||||||| ||| |||||| ||| | ||||||||| ||||||| |  ||||||||||||||||||||||||||||||    
T  28231240 agaggggtgatttttgggttaaaattgaccctaaa-tcacccatccgaattgtttttccttctatcttggttgaataagtgatttcacatattttctgtt 28231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 28262032 - 28261933
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatc-----ctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| |||||||      |||||||||| ||||||| ||||||||||||||    
T  28262032 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctatcataatttaattgaatatgtgattttacatattttctgtt 28261933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 32314468 - 32314518
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  32314468 ttgttttttcttctatcctaattgaataaatgatttcacatattttctgtt 32314518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 425
Target Start/End: Complemental strand, 11798653 - 11798566
Alignment:
Q  338 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt-cacatatttt 425  Q
    ||||||||||||||| |||||||| ||||||||||||||   ||| ||||| || |||||||||| ||||||| |||| ||||||||||    
T  11798653 gtgatttatggtcaattttgaccc-aaaatcacccctccatgttgcttttccttatatcctaattaaataagtaatttccacatatttt 11798566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 12891232 - 12891188
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcc 376  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  12891232 agaggggtgatttagggtcaattttgacccaaaaatcacccctcc 12891188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 426
Target Start/End: Complemental strand, 17767690 - 17767600
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt-cacatattttc 426  Q
    ||||||||||  ||||| ||||||||| || |||||||| | | ||||||||| || |||||||||| |||||||||||| |||||||||||    
T  17767690 gggtgatttagagtcaattttgacccagaa-tcaccccttcgagttgtttttccttatatcctaattaaataagtgatttccacatattttc 17767600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 8799510 - 8799548
Alignment:
Q  231 acataatttaaagtgaagcgaccaaataactcattataa 269  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  8799510 acataatttaaaatgaagtgaccaaataactcattataa 8799548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 12481513 - 12481415
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| | |||| ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  12481513 agaggggtgatttaggatcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 12481415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 15590222 - 15590124
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  15590222 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgttttttcttctatcctaattgaataagtgatttcacatattttctgtt 15590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 6420001 - 6419903
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  6420001 agaggggtgatttagggtcaattttgatccaaaaatcacccctctgagttgtttttccttctatcctaattgaataagtgatttcacatattttttgtt 6419903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 21507951 - 21507853
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  21507951 agaggggtgatttagggtcaattttgacccaaacatcacccctccaaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtt 21507853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 336 - 428
Target Start/End: Complemental strand, 31937557 - 31937466
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    |||||||||| |||||  ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31937557 gggtgatttagggtcagttttgacccaaaaatcacccctccgaattgtttttc-ttctatcctaattgaataagtgatttcacatattttctg 31937466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 8693803 - 8693702
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattcta---tcctaattgaataagtgatttcacatattttctg 428  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| | ||||||||| |||||   ||||||||||||||||||||||||||||||||||    
T  8693803 agaggggtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctcctaattgaataagtgatttcacatattttctg 8693704  T
Q  429 tt 430  Q
    ||    
T  8693703 tt 8693702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 14783314 - 14783216
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||| |||||| ||||||||||||||||| ||||| | ||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  14783314 agagggctgatttagggtcaattttgacccaaaaatcacgcctccgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtt 14783216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 23654228 - 23654326
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| ||||||||| |||||| ||||||||||||||||||| ||| ||||||||||| ||||| | ||| |||||||||||||||||||||||| ||||    
T  23654228 agagaggtgatttagggtcaattttgacccaaaaatcacccatccgatttgtttttccttctaccttaactgaataagtgatttcacatattttttgtt 23654326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 333 - 430
Target Start/End: Complemental strand, 35220045 - 35219949
Alignment:
Q  333 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| |||||| |||||| |||||||||||||||| | ||| ||||| |||||||| ||| ||||||||||| ||||||||||||||||    
T  35220045 gaggggtgatttagggtcaattttgactcaaaaatcacccctccaagttg-ttttccttctatccgaatcgaataagtgatatcacatattttctgtt 35219949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 2304953 - 2304855
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| | || | |||||||||||||||| |||||  | ||||||| | |||| || |||||||||||||||||||||||||||||||||    
T  2304953 agaggggtgatttaggatcgattttgacccaaaaatcaaccctctgagttgttttcccttctgtcataattgaataagtgatttcacatattttctgtt 2304855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 29927516 - 29927447
Alignment:
Q  338 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaata 407  Q
    ||||||||||||||| ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||    
T  29927516 gtgatttatggtcaattttgacccaaaaatcactcctccaagttgtttttccttctatcctaattgaata 29927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 426
Target Start/End: Complemental strand, 4922023 - 4921930
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt--cattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||||||| |||||| |||||||||||||| |||||||| | | ||||||  | ||||||| |||||||||||||||||||||||||||||    
T  4922023 aggggtgatttagggtcaattttgacccaaaaat-acccctcccagtagtttttttccttctatcttaattgaataagtgatttcacatattttc 4921930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 430
Target Start/End: Complemental strand, 19402950 - 19402853
Alignment:
Q  333 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||  |||||  ||||| |||||||||||||||   | ||||||||| || |||| |||||||| ||||||||||||||||||||||||    
T  19402950 gaggggtgatttcgggtcacttttgatccaaaaatcacccctttgagttgtttttccttgtatcataattgaacaagtgatttcacatattttctgtt 19402853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 4393777 - 4393843
Alignment:
Q  361 caaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||||||||||||  | ||||||| | |||||||||||| ||| |||||||||||||||||||||    
T  4393777 caaaaatcacccctctgagttgttttaccttctatcctaatagaacaagtgatttcacatattttct 4393843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 430
Target Start/End: Complemental strand, 31937615 - 31937576
Alignment:
Q  391 tctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  31937615 tctatcctaattgaataagtgatttaacatattttctgtt 31937576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 4084996 - 4085060
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatc 396  Q
    |||||||||||||| |||||| ||||||| |||||||| || ||| | ||||||||| |||||||    
T  4084996 agaggggtgatttagggtcaattttgaccgaaaaatcatccttccgaattgtttttccttctatc 4085060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 6296341 - 6296297
Alignment:
Q  383 tttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||    
T  6296341 tttttccttctaccctaattgaataagtggtttcacatattttct 6296297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 6303151 - 6303107
Alignment:
Q  383 tttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||    
T  6303151 tttttccttctaccctaattgaataagtggtttcacatattttct 6303107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 23638195 - 23638163
Alignment:
Q  398 taattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||||||||||||||||||||||    
T  23638195 taattgaataagtgatttcacatattttctgtt 23638163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 430
Target Start/End: Original strand, 15057722 - 15057757
Alignment:
Q  395 tcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15057722 tcctaattgaatacgtgatttcacatattttctgtt 15057757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 29268920 - 29268822
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||||| |||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  29268920 agaggggtgatttaaggtcaattttgaccctaaaatcacccctccgagttgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 29268822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 43244524 - 43244430
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  43244524 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacatattttc 43244430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 428
Target Start/End: Complemental strand, 394416 - 394321
Alignment:
Q  333 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  394416 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattcaataagtgatttcacatcttttctg 394321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 334 - 428
Target Start/End: Original strand, 51152105 - 51152199
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctg 428  Q
    |||||||||||| ||||||  |||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  51152105 aggggtgatttanggtcaatattgacccaaaaatcacccctccgaattgtttttccttctatcctaatttaataagtgatttcacatattttctg 51152199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 6911658 - 6911756
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  6911658 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 6911756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 7060302 - 7060400
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||| ||||| |||||| ||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  7060302 agaggggtaatttagggtcaattttaacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacatattttatgtt 7060400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 22757072 - 22757170
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| |||||| ||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  22757072 agaggggtgatttagggtcaattttgactcaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttcacatattttatgtt 22757170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 30202016 - 30202114
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||| ||||||||||||||| ||| ||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  30202016 agaggggtgatttaaggtcaattttgatccaaaaatcaccccttctagttgtttttccttttatcttaattgaataagtgatttcacatattttctgtt 30202114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 44757185 - 44757087
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| |||||| ||||||||||||||||||| | | | ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  44757185 agaggggtgatttaaggtcaattttgacccaaaaatcacccattcgagttgtttttccttctatcctaattgaataagtgatttcacatattttatgtt 44757087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 31521962 - 31522051
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatt 423  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  31521962 aggggtgatttagggtcaattttgacctaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacatatt 31522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 8712510 - 8712606
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| |||||||||||||||||||||| || ||||||||| |||||||||| |||| |||||||||||||||||||| ||||    
T  8712510 aggggtgatttagggtcaattttgacccaaaaatcacccctcataattgtttttccttctatcctagttgagtaagtgatttcacatattttttgtt 8712606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 24825627 - 24825722
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||||||||||| | |||| ||||||| ||||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24825627 agaggggtgatttaggatcaattttgacctaaaaatcactcctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttct 24825722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 478154 - 478057
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||| | ||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  478154 agaggggtgatttatggtcaattttgacccaaaaatcacca-tccgaattgtttttccttatatcctaattgaataagtgattttacatattttctgtt 478057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 26742602 - 26742508
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| | |||| ||||||||||||||||||| ||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  26742602 gggtgatttaggatcaattttgacccaaaaatcacccatccgaattgtttttctttctatcttaattgaataagtgatttcacatattttctgtt 26742508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 339 - 423
Target Start/End: Original strand, 13965545 - 13965629
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatt 423  Q
    ||||||| |||||| ||||||||||||||||||||| | | ||||||||| ||||||||||||||||||||||||||||||||||    
T  13965545 tgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcctaattgaataagtgatttcacatatt 13965629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 332 - 427
Target Start/End: Complemental strand, 24611942 - 24611847
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    ||||||||||||||||||||| || |||||||||||||||||||  | |  |||| | ||||||||||||||||||||||||||||||||||||||    
T  24611942 agaggggtgatttatggtcaatttagacccaaaaatcacccctctaagtcattttcccttctatcctaattgaataagtgatttcacatattttct 24611847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 39837572 - 39837671
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttca-ttctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| | |||| ||||||  || ||||||||||||||||||||||||||||||||||||||    
T  39837572 agaggggtgatttagcgtcaattttgacccaaaaatcaccccttcgatttttttttcccttttatcctaattgaataagtgatttcacatattttctgtt 39837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 24568856 - 24568758
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| ||| || ||||||||||||||||||| ||| | || |||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  24568856 agaggggtgatttagggtgaattttgacccaaaaatcacccttccgaattatttttccttctatcctaattgaataagtgattttacatattatctgtt 24568758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 25658145 - 25658243
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| ||| || |||||| ||||||||||| |||| | ||||||||| |||| |||||||| |||||||||||||||||||||||||||    
T  25658145 agaggggtgatttagggttaattttgactcaaaaatcacctctccaaattgtttttccttctttcctaatttaataagtgatttcacatattttctgtt 25658243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 24100117 - 24100212
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||||||||||||| | |||| ||||| |||||||| |||| ||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  24100117 agaggggtgatttaggatcaattttgaaccaaaaattacccatccgaattgtttttccttctatcgtaattgaataagtgatttcacatattttct 24100212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 26674354 - 26674448
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||| | |||| ||||||| ||||||||||||||| | ||| ||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  26674354 gggtgatttaggatcaattttgacctaaaaatcacccctccaaattgcttttccttctatcataattgaataagtgatttcacatattttttgtt 26674448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 29922812 - 29922910
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt---cattctatcctaattgaataagtgatttcacatattttct 427  Q
    |||| ||||||||| |||||| ||||||| || |||||||||||| | ||||||||   | ||||||||||||||||||||||||||||||||||||||    
T  29922812 agagaggtgatttagggtcaattttgacctaataatcacccctccaagttgttttttttctttctatcctaattgaataagtgatttcacatattttct 29922910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 6881958 - 6882032
Alignment:
Q  356 tgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||||||||| | | || |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  6881958 tgacccaaaaatcaccccttcgagttatttttccttctatcctaattaaataagtgatttcacatattttctgtt 6882032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 7083950 - 7083864
Alignment:
Q  341 atttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttct 427  Q
    ||||| |||||| ||||| |||||||||||||||   | ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7083950 atttagggtcaattttgatccaaaaatcacccctatgaattgtttttccttctatcataattgaataagtgatttcacatattttct 7083864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 7861344 - 7861250
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||   |||| |||||||||||||||||| |||  | || |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  7861344 gggtgatttagaatcaattttgacccaaaaatcaccactctgaattatttttccttctatcctaattaaataagtgatttcacatattttctgtt 7861250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 340 - 430
Target Start/End: Complemental strand, 20400038 - 20399948
Alignment:
Q  340 gatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| |||||| |||||||||||||||||||  || | ||| ||||  |||||||||||||||||||||||||||| ||||||||||||    
T  20400038 gatttagggtcaattttgacccaaaaatcacccacccgaattgctttttcttctatcctaattgaataagtgatttcatatattttctgtt 20399948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 347 - 425
Target Start/End: Complemental strand, 38944275 - 38944197
Alignment:
Q  347 ggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    |||||| |||| |||||||||||||||||| | ||||||||| ||||||| || |||||||||||||||||||||||||    
T  38944275 ggtcaattttggcccaaaaatcacccctccaaattgtttttccttctatcgtagttgaataagtgatttcacatatttt 38944197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 337 - 425
Target Start/End: Original strand, 5814330 - 5814418
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    ||||||||| |||||| ||||| |||||||||| |||||| | ||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  5814330 ggtgatttagggtcaattttgatccaaaaatcatccctccaagttgttttcccttctatcttaattgaataagttatttcacatatttt 5814418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 424
Target Start/End: Complemental strand, 11210456 - 11210364
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattt 424  Q
    |||||||||||||| |||||| |||| || ||||||||||||||| | || |||||| | | ||| |||||||||||||||||||||||||||    
T  11210456 agaggggtgatttagggtcaattttgccctaaaaatcacccctccgaattatttttcctcccatcataattgaataagtgatttcacatattt 11210364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 19745369 - 19745465
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| | |||| ||||||||||||||||  | ||| | ||||||||  || |||||||||||||||| |||||||||||||||||||||    
T  19745369 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacatattttctgtt 19745465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 430
Target Start/End: Complemental strand, 19794437 - 19794341
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| | |||| ||||||||||||||||  | ||| | ||||||||  || |||||||||||||||| |||||||||||||||||||||    
T  19794437 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacatattttctgtt 19794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 27394810 - 27394906
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||| ||||||||||||||||||| |||   || |||||| ||||||||||||||||||||| |||| | ||||||| ||||    
T  27394810 aggggtgatttagggtcaattttgacccaaaaatcacccttccggattatttttccttctatcctaattgaataagtaatttaaaatattttatgtt 27394906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 424
Target Start/End: Original strand, 7084184 - 7084276
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattt 424  Q
    |||||||||||||| | |||| |||||||||||||| |  | ||| ||||||||||| ||||| | ||||||||||||||||| |||||||||    
T  7084184 agaggggtgatttaggttcaattttgacccaaaaattatgcttccgatttgtttttccttctaccttaattgaataagtgattgcacatattt 7084276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 426
Target Start/End: Complemental strand, 22049543 - 22049453
Alignment:
Q  336 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt-cacatattttc 426  Q
    |||||||||| ||| || |||||||||||| |||||| | | | ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  22049543 gggtgatttagggttaattttgacccaaaa-tcaccctttcgaattgtttttccttctatcctaattgaataagtgatttccacatattttc 22049453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 626690 - 626594
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||||| ||  || ||||||||||||||||||| ||  | || |||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  626690 agaggggtgatttagggctaattttgacccaaaaatcacccatctgaattatttttc-ttctatcataattgaataagtga-ttcacatattttctgtt 626594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 430
Target Start/End: Complemental strand, 43493394 - 43493332
Alignment:
Q  368 cacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  43493394 cacccctccgaattgtttttccttctatcttaattgaataagtgatttcacatattttttgtt 43493332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 45351205 - 45351115
Alignment:
Q  342 tttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaatt-gaataagtgatttcacatattttctgtt 430  Q
    |||| |||||| ||||| ||||||||||||||||| | |||||||| | || ||| |||||| ||||||||||||||||||||||||||||    
T  45351205 tttagggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacatattttctgtt 45351115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 45360684 - 45360594
Alignment:
Q  342 tttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaatt-gaataagtgatttcacatattttctgtt 430  Q
    |||| |||||| ||||| ||||||||||||||||| | |||||||| | || ||| |||||| ||||||||||||||||||||||||||||    
T  45360684 tttagggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacatattttctgtt 45360594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 430
Target Start/End: Original strand, 50801225 - 50801293
Alignment:
Q  362 aaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| || ||||| | || |||||| || ||||||||||||||||||||||||||||||||||||||    
T  50801225 aaaaataactcctccgaattatttttccttttatcctaattgaataagtgatttcacatattttctgtt 50801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 39523435 - 39523485
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||||||    
T  39523435 ttgtttttccttttatcctaattgaataagtgatttcacatgttttctgtt 39523485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 430
Target Start/End: Original strand, 2447809 - 2447876
Alignment:
Q  363 aaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| | | || |||||  |||||||||||||||||||||||||||||||| ||| ||||    
T  2447809 aaaatcaccccttcgaattatttttttttctatcctaattgaataagtgatttcacataatttatgtt 2447876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 430
Target Start/End: Complemental strand, 13586370 - 13586286
Alignment:
Q  340 gatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||||||| |||||| |||||||      ||| | ||||||||  || |||| |||||||||||||||||||||||||||||||||    
T  13586370 gatttatggtcaattttgactcaaaaat------tccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtt 13586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 420
Target Start/End: Complemental strand, 20887889 - 20887810
Alignment:
Q  341 atttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 420  Q
    ||||| |||||| ||||||||||||||||||| ||| | || || ||  ||||||| ||||| |||||||||||||||||    
T  20887889 atttaaggtcaattttgacccaaaaatcacccatccgaattattattttttctatcttaattcaataagtgatttcacat 20887810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 426
Target Start/End: Complemental strand, 12717255 - 12717166
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt-cacatattttc 426  Q
    |||||||||  ||||| |||||||||||| ||| || ||| | ||||||||  ||||||||||||| |||||||||||| |||||||||||    
T  12717255 ggtgatttagagtcaattttgacccaaaa-tcatccgtccgacttgttttttcttctatcctaattaaataagtgatttccacatattttc 12717166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 8517541 - 8517501
Alignment:
Q  390 ttctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  8517541 ttctattctaattgaataagtgattttacatattttctgtt 8517501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 426
Target Start/End: Original strand, 3159021 - 3159115
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtga-tttcacatattttc 426  Q
    |||||| ||||||| |||||| ||| |||||||| ||||   ||| | ||||||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  3159021 agagggatgatttagggtcaacttttacccaaaa-tcactattccgagttgtttttccttctatcataattaaataagtgattttcacatattttc 3159115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 425
Target Start/End: Complemental strand, 36124468 - 36124397
Alignment:
Q  354 tttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatatttt 425  Q
    ||||| ||||||||||| | ||| | ||||||||| | ||||| ||||||||| | ||||||||||||||||    
T  36124468 tttgatccaaaaatcactcatcccaattgtttttcctcctatcttaattgaatgattgatttcacatatttt 36124397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 42197533 - 42197628
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| ||| || ||||||  |||||||||   ||| | || |||||| ||||||||||||| ||||||||| ||||| |||||| ||||    
T  42197533 aggggtgatttagggttaattttgacaaaaaaatcactt-tccgaattatttttccttctatcctaatttaataagtgacttcacgtattttttgtt 42197628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 1229 - 1135
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttc 426  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  1229 agaggggtgatttaaggtcaattttgacccaaaaatcacccctgcgaattgtttttccttctaccctaattgaataagtgatttcacatattttc 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 1 - 51
Alignment:
Q  380 ttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  1 ttgtttttccttctatcttaattgaataagtgatttcacatattttttgtt 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 2878 - 2978
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt--cattctatcctaattgaataagtgatttcacatattttctgt 429  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| | ||||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  2878 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttccttctatcctaattgaataagtgatttcacatattttctgt 2977  T
Q  430 t 430  Q
    |    
T  2978 t 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 347 - 430
Target Start/End: Complemental strand, 7252 - 7169
Alignment:
Q  347 ggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  7252 ggtccaatttgacccaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 7169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 74142 - 74240
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||| ||||||||   |||| ||||||||||||||||||| ||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  74142 agaggagtgatttagaatcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 74240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 422
Target Start/End: Original strand, 35065 - 35150
Alignment:
Q  337 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatat 422  Q
    ||||||||| |||||| ||||||||||||||||||| ||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  35065 ggtgatttagggtcaattttgacccaaaaatcacccatccgagttgtttttccttctatcctaattgaataagtgatttcacatat 35150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 404401 - 404303
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||| |||||| |||||| ||||| ||||||||||||| ||| | | ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  404401 agaggggcgatttaaggtcaattttgatccaaaaatcacccatccgaatagtttttcttgctatcctaattgaataagtgatttcacatattttctgtt 404303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 430
Target Start/End: Complemental strand, 2557 - 2462
Alignment:
Q  334 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||||||| |||||  ||||||||||||||||||| ||  | ||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  2557 aggggtgatttagggtcatttttgacccaaaaatcaccc-tctgagttgtttttccttctatcataatcgaataagtgatttcacatattttctgtt 2462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 13392 - 13290
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattct----atcctaattgaataagtgatttcacatattttct 427  Q
    |||| ||||||||| |||||| ||||| ||||||||||||||||| | ||||||||  || |    ||||||||||||||||||||||||||| ||||||    
T  13392 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttttttttttttatcctaattgaataagtgatttcacatcttttct 13293  T
Q  428 gtt 430  Q
    |||    
T  13292 gtt 13290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 1553 - 1650
Alignment:
Q  332 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    |||||||| ||||| | || | |||||||||||||||||| |||  |||| | |||| ||||| | |||||||||||||||||||||||||||| ||||    
T  1553 agaggggtaatttaggttccattttgacccaaaaatcacctctctgattt-tgtttccttctaccataattgaataagtgatttcacatattttatgtt 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 430
Target Start/End: Complemental strand, 4202 - 4112
Alignment:
Q  339 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacatattttctgtt 430  Q
    ||||||| |||||| |||||| |||||||||| |||   | |||| || | ||||||||||||| |||||||||||||||||||||| ||||    
T  4202 tgatttagggtcaattttgacacaaaaatcactcctttgagttgtcttcc-ttctatcctaattaaataagtgatttcacatattttatgtt 4112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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