View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8265_high_5 (Length: 219)

Name: NF8265_high_5
Description: NF8265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8265_high_5
NF8265_high_5
[»] chr3 (39 HSPs)
chr3 (15-214)||(54685159-54685358)
chr3 (15-215)||(33342079-33342279)
chr3 (15-215)||(38168112-38168312)
chr3 (15-219)||(53771239-53771444)
chr3 (15-219)||(30153140-30153344)
chr3 (15-219)||(16261651-16261856)
chr3 (16-213)||(28558370-28558567)
chr3 (15-217)||(23492571-23492773)
chr3 (15-171)||(7854180-7854336)
chr3 (15-171)||(17955885-17956041)
chr3 (16-162)||(45581830-45581976)
chr3 (15-171)||(55513068-55513224)
chr3 (15-171)||(3992748-3992904)
chr3 (15-171)||(54038025-54038181)
chr3 (15-171)||(2844389-2844545)
chr3 (15-127)||(18970119-18970231)
chr3 (140-219)||(2050115-2050194)
chr3 (16-95)||(48421776-48421855)
chr3 (140-219)||(12030026-12030105)
chr3 (140-219)||(13839200-13839279)
chr3 (16-95)||(15550797-15550876)
chr3 (140-219)||(17912351-17912430)
chr3 (140-219)||(11986033-11986112)
chr3 (140-219)||(19260702-19260781)
chr3 (140-217)||(2449107-2449184)
chr3 (140-219)||(13954757-13954836)
chr3 (140-219)||(45861122-45861201)
chr3 (140-217)||(15615137-15615214)
chr3 (173-219)||(5240582-5240628)
chr3 (140-214)||(14285289-14285363)
chr3 (16-125)||(11402789-11402898)
chr3 (140-217)||(14842442-14842519)
chr3 (19-117)||(17393636-17393735)
chr3 (138-213)||(51960990-51961065)
chr3 (140-219)||(54651764-54651843)
chr3 (140-214)||(19947026-19947100)
chr3 (140-217)||(8268605-8268682)
chr3 (140-217)||(8275705-8275782)
chr3 (140-217)||(18896916-18896993)
[»] scaffold0465 (1 HSPs)
scaffold0465 (15-215)||(9839-10040)
[»] scaffold0032 (2 HSPs)
scaffold0032 (15-218)||(55779-55982)
scaffold0032 (69-217)||(108030-108179)
[»] scaffold0251 (1 HSPs)
scaffold0251 (15-219)||(13238-13443)
[»] chr7 (34 HSPs)
chr7 (15-219)||(42056141-42056346)
chr7 (15-215)||(2029119-2029319)
chr7 (15-215)||(3049780-3049980)
chr7 (15-219)||(2190038-2190243)
chr7 (15-171)||(126613-126769)
chr7 (15-171)||(1936918-1937074)
chr7 (15-171)||(32493947-32494103)
chr7 (15-171)||(111170-111326)
chr7 (33-213)||(15516720-15516901)
chr7 (140-219)||(16212071-16212150)
chr7 (16-124)||(13352151-13352259)
chr7 (140-219)||(11580614-11580693)
chr7 (140-219)||(36052971-36053050)
chr7 (16-124)||(39291457-39291565)
chr7 (152-217)||(13036893-13036958)
chr7 (138-219)||(25124448-25124529)
chr7 (140-217)||(7293333-7293410)
chr7 (140-217)||(11516544-11516621)
chr7 (140-217)||(15441433-15441510)
chr7 (140-217)||(30261998-30262075)
chr7 (140-219)||(15709469-15709548)
chr7 (140-217)||(14113858-14113935)
chr7 (141-217)||(25292207-25292283)
chr7 (173-219)||(17817313-17817359)
chr7 (173-219)||(19049642-19049688)
chr7 (141-214)||(10000245-10000318)
chr7 (140-217)||(13321334-13321411)
chr7 (140-219)||(36024452-36024532)
chr7 (19-93)||(15977820-15977894)
chr7 (140-214)||(47480902-47480976)
chr7 (152-217)||(14423509-14423574)
chr7 (141-214)||(48622541-48622614)
chr7 (19-117)||(18151259-18151357)
chr7 (140-217)||(13758677-13758754)
[»] chr4 (26 HSPs)
chr4 (15-219)||(15272164-15272369)
chr4 (15-215)||(14951960-14952160)
chr4 (15-171)||(5682429-5682584)
chr4 (15-171)||(25119108-25119264)
chr4 (70-219)||(15135860-15136010)
chr4 (140-219)||(13246737-13246816)
chr4 (15-147)||(19559557-19559689)
chr4 (15-124)||(49071885-49071994)
chr4 (140-219)||(122194-122273)
chr4 (140-219)||(15674962-15675041)
chr4 (140-217)||(16608968-16609045)
chr4 (140-217)||(26680517-26680594)
chr4 (140-219)||(10104123-10104202)
chr4 (21-95)||(34177617-34177691)
chr4 (140-217)||(16327795-16327872)
chr4 (143-219)||(31132628-31132704)
chr4 (140-219)||(33241011-33241090)
chr4 (141-219)||(55376447-55376525)
chr4 (141-214)||(22738577-22738650)
chr4 (152-214)||(32460561-32460623)
chr4 (140-217)||(10488879-10488956)
chr4 (149-217)||(13048090-13048158)
chr4 (140-217)||(20001030-20001107)
chr4 (156-213)||(40885418-40885475)
chr4 (20-80)||(14500208-14500268)
chr4 (141-217)||(26339327-26339403)
[»] chr8 (23 HSPs)
chr8 (15-219)||(24385605-24385809)
chr8 (15-219)||(41506662-41506866)
chr8 (15-171)||(24716763-24716919)
chr8 (15-171)||(39115473-39115629)
chr8 (16-171)||(274642-274797)
chr8 (16-171)||(641052-641207)
chr8 (16-171)||(826858-827013)
chr8 (16-124)||(17502360-17502468)
chr8 (16-171)||(21259392-21259547)
chr8 (16-124)||(4234054-4234162)
chr8 (16-124)||(23218076-23218184)
chr8 (15-81)||(22321437-22321503)
chr8 (140-219)||(43373345-43373424)
chr8 (140-219)||(16193596-16193674)
chr8 (140-219)||(24928669-24928748)
chr8 (140-217)||(5238404-5238481)
chr8 (140-217)||(22907083-22907160)
chr8 (140-217)||(24661117-24661194)
chr8 (140-217)||(43685863-43685940)
chr8 (141-219)||(7000473-7000551)
chr8 (152-214)||(21494314-21494376)
chr8 (16-94)||(18118259-18118337)
chr8 (140-214)||(22886654-22886728)
[»] chr5 (25 HSPs)
chr5 (15-219)||(21205124-21205327)
chr5 (15-219)||(21650893-21651097)
chr5 (15-219)||(2032008-2032212)
chr5 (15-213)||(11342883-11343081)
chr5 (21-213)||(16105847-16106040)
chr5 (20-213)||(25005019-25005210)
chr5 (16-94)||(22662653-22662731)
chr5 (140-219)||(27182424-27182503)
chr5 (140-219)||(108681-108760)
chr5 (152-219)||(23981358-23981425)
chr5 (142-219)||(18530941-18531018)
chr5 (140-217)||(20623286-20623363)
chr5 (140-217)||(21233397-21233474)
chr5 (140-217)||(37053061-37053138)
chr5 (140-219)||(22053706-22053785)
chr5 (140-217)||(16536514-16536591)
chr5 (140-217)||(23507270-23507347)
chr5 (140-217)||(25900275-25900352)
chr5 (152-211)||(7529240-7529299)
chr5 (140-217)||(1219392-1219469)
chr5 (152-217)||(32951024-32951089)
chr5 (141-217)||(23328865-23328941)
chr5 (141-217)||(24616469-24616545)
chr5 (141-217)||(24712845-24712921)
chr5 (141-217)||(24745863-24745939)
[»] chr2 (29 HSPs)
chr2 (15-215)||(9652753-9652953)
chr2 (15-219)||(21273902-21274106)
chr2 (15-171)||(22274920-22275076)
chr2 (15-171)||(22284153-22284309)
chr2 (21-171)||(25213252-25213403)
chr2 (21-171)||(15633418-15633568)
chr2 (140-219)||(463043-463122)
chr2 (140-219)||(22863235-22863314)
chr2 (16-171)||(7321716-7321871)
chr2 (140-219)||(8891549-8891628)
chr2 (140-219)||(24341262-24341341)
chr2 (140-219)||(36982317-36982396)
chr2 (140-217)||(14906309-14906386)
chr2 (140-217)||(23820388-23820465)
chr2 (140-217)||(19689270-19689347)
chr2 (140-219)||(17396520-17396599)
chr2 (140-215)||(20015328-20015403)
chr2 (16-94)||(20279610-20279688)
chr2 (141-219)||(32466177-32466254)
chr2 (140-214)||(33128372-33128446)
chr2 (140-217)||(12641514-12641591)
chr2 (141-214)||(21142203-21142276)
chr2 (140-217)||(25265258-25265335)
chr2 (141-214)||(5888505-5888578)
chr2 (140-217)||(8944153-8944230)
chr2 (140-217)||(12635740-12635817)
chr2 (140-217)||(12728699-12728776)
chr2 (140-217)||(34824782-34824859)
chr2 (141-217)||(23774444-23774520)
[»] scaffold0597 (1 HSPs)
scaffold0597 (15-215)||(835-1035)
[»] scaffold0706 (1 HSPs)
scaffold0706 (14-219)||(6396-6601)
[»] chr6 (20 HSPs)
chr6 (15-219)||(23995121-23995326)
chr6 (15-219)||(26089933-26090138)
chr6 (16-214)||(15742078-15742275)
chr6 (15-214)||(18002353-18002553)
chr6 (15-171)||(19983193-19983349)
chr6 (15-171)||(35015058-35015214)
chr6 (15-171)||(4991271-4991427)
chr6 (15-171)||(18583515-18583671)
chr6 (16-124)||(22585494-22585602)
chr6 (16-124)||(22590325-22590433)
chr6 (16-147)||(15889631-15889762)
chr6 (15-124)||(15004855-15004963)
chr6 (16-124)||(25640504-25640611)
chr6 (140-219)||(23148303-23148382)
chr6 (140-219)||(23153754-23153833)
chr6 (140-219)||(27751742-27751821)
chr6 (140-219)||(29666181-29666260)
chr6 (140-217)||(1649976-1650053)
chr6 (140-214)||(32276617-32276691)
chr6 (152-214)||(16299844-16299906)
[»] scaffold0234 (1 HSPs)
scaffold0234 (17-215)||(17261-17459)
[»] scaffold0039 (1 HSPs)
scaffold0039 (16-219)||(12371-12574)
[»] chr1 (14 HSPs)
chr1 (15-213)||(15861285-15861483)
chr1 (15-171)||(21860209-21860365)
chr1 (15-171)||(44034872-44035028)
chr1 (15-95)||(22367216-22367296)
chr1 (79-171)||(41218667-41218759)
chr1 (140-219)||(37844327-37844406)
chr1 (140-219)||(20445987-20446066)
chr1 (140-219)||(20893504-20893583)
chr1 (140-219)||(20913335-20913414)
chr1 (140-219)||(20931650-20931729)
chr1 (140-219)||(20531751-20531830)
chr1 (140-217)||(45051726-45051803)
chr1 (140-217)||(51452809-51452886)
chr1 (141-217)||(7640806-7640882)
[»] scaffold0004 (1 HSPs)
scaffold0004 (15-219)||(193350-193545)
[»] scaffold0034 (1 HSPs)
scaffold0034 (15-171)||(80062-80218)
[»] scaffold0686 (2 HSPs)
scaffold0686 (15-171)||(5984-6140)
scaffold0686 (26-171)||(5778-5923)
[»] scaffold0303 (2 HSPs)
scaffold0303 (15-214)||(4304-4504)
scaffold0303 (15-95)||(5-85)
[»] scaffold0016 (2 HSPs)
scaffold0016 (17-171)||(162079-162233)
scaffold0016 (17-171)||(166165-166319)
[»] scaffold0184 (1 HSPs)
scaffold0184 (15-171)||(31181-31337)
[»] scaffold0078 (2 HSPs)
scaffold0078 (15-171)||(41507-41663)
scaffold0078 (140-217)||(36935-37012)
[»] scaffold0028 (3 HSPs)
scaffold0028 (21-171)||(130760-130911)
scaffold0028 (152-219)||(89331-89398)
scaffold0028 (152-219)||(107661-107728)
[»] scaffold0132 (2 HSPs)
scaffold0132 (31-171)||(42568-42708)
scaffold0132 (140-206)||(13824-13890)
[»] scaffold0116 (1 HSPs)
scaffold0116 (15-171)||(30292-30448)
[»] scaffold0342 (1 HSPs)
scaffold0342 (15-171)||(353-508)
[»] scaffold0175 (3 HSPs)
scaffold0175 (15-104)||(15147-15236)
scaffold0175 (140-217)||(837-914)
scaffold0175 (181-215)||(15238-15272)
[»] scaffold0063 (1 HSPs)
scaffold0063 (16-147)||(44039-44170)
[»] scaffold0162 (3 HSPs)
scaffold0162 (140-219)||(26293-26372)
scaffold0162 (140-217)||(12063-12140)
scaffold0162 (140-213)||(8051-8125)
[»] scaffold0025 (2 HSPs)
scaffold0025 (140-219)||(146906-146985)
scaffold0025 (140-219)||(9160-9239)
[»] scaffold0012 (2 HSPs)
scaffold0012 (140-218)||(247320-247398)
scaffold0012 (140-217)||(34030-34107)
[»] scaffold1295 (1 HSPs)
scaffold1295 (16-95)||(305-384)
[»] scaffold0507 (1 HSPs)
scaffold0507 (16-95)||(1478-1557)
[»] scaffold0498 (1 HSPs)
scaffold0498 (140-219)||(9183-9262)
[»] scaffold0266 (2 HSPs)
scaffold0266 (140-219)||(1430-1509)
scaffold0266 (140-219)||(3461-3540)
[»] scaffold0001 (2 HSPs)
scaffold0001 (140-219)||(172210-172289)
scaffold0001 (140-219)||(177913-177992)
[»] scaffold0058 (1 HSPs)
scaffold0058 (137-219)||(57345-57427)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-219)||(272330-272409)
[»] scaffold0302 (1 HSPs)
scaffold0302 (140-219)||(12418-12497)
[»] scaffold0018 (1 HSPs)
scaffold0018 (140-219)||(51061-51140)
[»] scaffold0011 (1 HSPs)
scaffold0011 (152-219)||(123040-123107)
[»] scaffold0008 (1 HSPs)
scaffold0008 (140-219)||(128048-128127)
[»] scaffold0141 (2 HSPs)
scaffold0141 (140-217)||(22857-22934)
scaffold0141 (140-217)||(27112-27189)
[»] scaffold0124 (1 HSPs)
scaffold0124 (140-217)||(1451-1528)
[»] scaffold0106 (1 HSPs)
scaffold0106 (140-219)||(42034-42113)
[»] scaffold0079 (1 HSPs)
scaffold0079 (16-124)||(3785-3897)
[»] scaffold0160 (1 HSPs)
scaffold0160 (141-215)||(339-413)
[»] scaffold0158 (1 HSPs)
scaffold0158 (141-219)||(25532-25610)
[»] scaffold0772 (1 HSPs)
scaffold0772 (140-217)||(5846-5923)
[»] scaffold0077 (1 HSPs)
scaffold0077 (140-219)||(36787-36869)
[»] scaffold0118 (1 HSPs)
scaffold0118 (140-214)||(34266-34340)
[»] scaffold0066 (2 HSPs)
scaffold0066 (140-218)||(45338-45416)
scaffold0066 (140-218)||(54724-54802)
[»] scaffold0413 (1 HSPs)
scaffold0413 (138-217)||(5945-6024)
[»] scaffold0215 (2 HSPs)
scaffold0215 (155-214)||(9223-9282)
scaffold0215 (155-214)||(16121-16180)
[»] scaffold0023 (1 HSPs)
scaffold0023 (140-219)||(48903-48982)
[»] scaffold0207 (1 HSPs)
scaffold0207 (140-214)||(18026-18100)
[»] scaffold0125 (1 HSPs)
scaffold0125 (140-214)||(41965-42039)
[»] scaffold0516 (1 HSPs)
scaffold0516 (141-214)||(12002-12075)
[»] scaffold0467 (1 HSPs)
scaffold0467 (152-217)||(10211-10276)
[»] scaffold0057 (1 HSPs)
scaffold0057 (16-67)||(6082-6133)
[»] scaffold0335 (1 HSPs)
scaffold0335 (140-214)||(5434-5508)
[»] scaffold0173 (1 HSPs)
scaffold0173 (140-214)||(5549-5623)
[»] scaffold0029 (1 HSPs)
scaffold0029 (152-214)||(49710-49772)
[»] scaffold0892 (1 HSPs)
scaffold0892 (165-214)||(3750-3799)
[»] scaffold0017 (1 HSPs)
scaffold0017 (141-214)||(54182-54255)


Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 54685358 - 54685159
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54685358 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 54685259  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  54685258 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttagacttcaatttagctcctaa 54685159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 33342079 - 33342279
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33342079 acatcaaattaacatattcaaacatatctctaccacattagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 33342178  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  33342179 gaacaagagaaaaagaattaaccaaatgattatgataaagactaaccctcttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 33342278  T
Q  215 g 215  Q
    |    
T  33342279 g 33342279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 38168112 - 38168312
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38168112 acatcaaattaacatattcaaacatatttctacaacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 38168211  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  38168212 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 38168311  T
Q  215 g 215  Q
    |    
T  38168312 g 38168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 53771239 - 53771444
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771239 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 53771338  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  53771339 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 53771438  T
Q  214 agctca 219  Q
    ||||||    
T  53771439 agctca 53771444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 30153140 - 30153344
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30153140 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 30153239  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||  |||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||||| ||||  ||||||||||||    
T  30153240 gaacaagagaaaaagaattaattaaatgattatgataaaaactaacccccttaccttagatgaagattaatcccaacttagacttctctttagctcctaa 30153339  T
Q  215 gctca 219  Q
    |||||    
T  30153340 gctca 30153344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 16261651 - 16261856
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16261651 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattacgcata 16261750  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||  |||||||||||||| |||||||||||    
T  16261751 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctccta 16261850  T
Q  214 agctca 219  Q
    ||||||    
T  16261851 agctca 16261856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 28558370 - 28558567
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  28558370 catcaaattaacatattcaaacatatctctatcacataagcacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatgg 28558469  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||| |||||||||| |||||||||||||||||| |||||||    
T  28558470 aacaagagaaaaagaattaactaaatgattatgataaaaactaaccctcttaccttagataaagattaatcccaacttaggcttcaattttgctccta 28558567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 23492571 - 23492773
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23492571 acatcaaattaacacattcaaacatatctctacaacataagcaagaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 23492670  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||| |  ||||   ||||||||| |||||||||    
T  23492671 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 23492770  T
Q  215 gct 217  Q
    |||    
T  23492771 gct 23492773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 7854180 - 7854336
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7854180 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 7854279  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| || || |||||||| ||||||||    
T  7854280 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctt 7854336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 17956041 - 17955885
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17956041 acatcaaattaacatattcagacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcgattatgcata 17955942  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  17955941 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 17955885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 45581830 - 45581976
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45581830 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatag 45581929  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaaccc 162  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  45581930 aacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 45581976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 55513068 - 55513224
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  55513068 acatcgaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcata 55513167  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  55513168 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 55513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 3992748 - 3992904
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  3992748 acatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaaggttgagttcatgataattacttattctcataatcaattatgcata 3992847  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  3992848 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 3992904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 54038181 - 54038025
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  54038181 acatcaaattaacatattcaaacatatatctacaatataagcacgaatgtcaaacattgagttcatgataatcacttattcccataatcaattatgcata 54038082  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  54038081 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 54038025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 2844389 - 2844545
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  2844389 acatcaaattaacatattaaaacaaaaatctacaacataagcacgaatttcaaagattgggttcatgataatcgcttattcccataatcaattatgcata 2844488  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||| |||||||||||||| ||| |||||||||| ||||| |||||||| ||||||||    
T  2844489 gaataagagaaaaagaatcaactaaatgattatgataaaaactaacccccttacctt 2844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 18970119 - 18970231
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||    
T  18970119 acatcaaattaacatacttaaacatatcactacaacatgagcacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcata 18970218  T
Q  115 gaacaagagaaaa 127  Q
    ||| |||||||||    
T  18970219 gaaaaagagaaaa 18970231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 2050115 - 2050194
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  2050115 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaaactca 2050194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 48421776 - 48421855
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 95  Q
    ||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||||||  ||||||||||||||    
T  48421776 catcaaattaacatactcaaacatatcactacaacatgagcatgaatttcaaagattgggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 12030105 - 12030026
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||| || |||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  12030105 atgattatgataatgattaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctca 12030026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 13839200 - 13839279
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| |||||||| ||||| | ||||||||||||||||||||||||||||||    
T  13839200 atgattatgatgaagactaacccccttaccttagatgaagagtaatccctacttaggcttcaatttagctcctaagctca 13839279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 15550797 - 15550876
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 95  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||||||||||||||    
T  15550797 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattc 15550876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 17912430 - 17912351
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| || || ||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttaccttagataaagattaatcccacctcaggcttcaatttagctcctaagctca 17912351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 11986112 - 11986033
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  |||||||||||||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcaatttagctcctaagctca 11986033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 19260781 - 19260702
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||| |||||||||||||| ||| ||||    
T  19260781 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaatctca 19260702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 2449184 - 2449107
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 2449107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 13954836 - 13954757
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctca 13954757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 45861122 - 45861201
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctca 45861201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 15615137 - 15615214
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  |  ||| |||||||||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagct 15615214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 5240628 - 5240582
Alignment:
Q  173 gatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  5240628 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctca 5240582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 14285289 - 14285363
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  |||||| |||||| ||||||||||||    
T  14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 14285363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 11402789 - 11402898
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||| | ||| ||||||||||| ||| || || ||||||||||||||  |||  |||||  ||||||||||||||  |||| || || |||||||    
T  11402789 catcaaattcatatactcaaacatatcactataatatgagcacgaatttcaacaattaagttcacaataatcacttattcaaataagcacttgtgcatag 11402888  T
Q  116 aacaagagaa 125  Q
    ||| ||||||    
T  11402889 aactagagaa 11402898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 14842519 - 14842442
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| || ||||||||| |  ||||   ||||||||| ||||||||||||    
T  14842519 atgattatgataaagactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagctcctaagct 14842442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 17393636 - 17393735
Alignment:
Q  19 caaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctca--taatcaattatgcataga 116  Q
    ||||||||||||  |||||||||| |||||||   ||||||||||||||  |||  |||||| ||||||||||| |||||  ||| ||||||||||||||    
T  17393636 caaattaacatacccaaacatatcactacaactagagcacgaatttcaacaattaagttcataataatcactta-tctcaattaagcaattatgcataga 17393734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 51961065 - 51960990
Alignment:
Q  138 aaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |||||||||| || ||||||||||| |||||||| ||| | ||||||||  ||||||| ||||| |||| ||||||    
T  51961065 aaatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcactttacctccta 51960990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 54651764 - 54651843
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||| ||||| |||||||| ||||| |||||| |  |||||  ||||||||| ||||||||||||||    
T  54651764 atgattatgatgaagacaaacccccttaccttagatgatgattaacccaaacttttgcttcaattaagctcctaagctca 54651843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 19947026 - 19947100
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||  ||||||||||||| |||| |||||||    
T  19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaa 19947100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 8268682 - 8268605
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 8268605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 8275782 - 8275705
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 8275705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 18896993 - 18896916
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| ||||||||||| ||||||||| |  ||||   ||||||||| ||||||||||||    
T  18896993 atgattatgataataactaacccccttaccttggaagaagattaacccaaactcttgcttcaattcagctcctaagct 18896916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 10040 - 9839
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaatt-atgcat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  10040 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattttcataatcaatttatgcat 9941  T
Q  114 agaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  9940 agaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctccta 9841  T
Q  214 ag 215  Q
    ||    
T  9840 ag 9839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 172; Significance: 1e-92; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 55779 - 55982
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55779 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 55878  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||||||| ||| |||||||||||||||||||||||    
T  55879 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagataaagattaatcccaatttaggcttcaatttagctcctaa 55978  T
Q  215 gctc 218  Q
    ||||    
T  55979 gctc 55982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 108179 - 108030
Alignment:
Q  69 gattgggttcatgataatcacttattctcataatcaattatgcatagaac-aagagaaaaagaattaaccaaatgattatcataaagactaacccactta 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaatgaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 108080  T
Q  168 ccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||| |||||||||||||  ||||||||||||||||| ||||||||||||    
T  108079 ccttagatgaagattaattccaacttaggcttcaattcagctcctaagct 108030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 13443 - 13238
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13443 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 13344  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  13343 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 13244  T
Q  214 agctca 219  Q
    ||||||    
T  13243 agctca 13238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 42056346 - 42056141
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42056346 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 42056247  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  42056246 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 42056147  T
Q  214 agctca 219  Q
    ||||||    
T  42056146 agctca 42056141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 2029119 - 2029319
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2029119 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 2029218  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||||| |||||||| ||| |||||||||  |||||||||||||||||||||||||||    
T  2029219 gaacaagagaaaaaaaattaactaaatgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaa 2029318  T
Q  215 g 215  Q
    |    
T  2029319 g 2029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 3049780 - 3049980
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3049780 acatcaaattaacatattcaaacatatctctacaatataaacacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 3049879  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||| |||    
T  3049880 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcttaa 3049979  T
Q  215 g 215  Q
    |    
T  3049980 g 3049980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 2190243 - 2190038
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2190243 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtacatgataatcacttattctcataatcaattatgcata 2190144  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| ||||| |||||||  |||||||| ||| |||||||||| |||||||||||||| |||| ||||||    
T  2190143 gaatcaagagaaaaagaattaaccaaatgattatgataaaaactaaccgccttaccttagataaagattaatcccaacttaggcttcactttaactccta 2190044  T
Q  214 agctca 219  Q
    ||||||    
T  2190043 agctca 2190038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 126613 - 126769
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126613 acatcaaattaacatattcaaacatatctctgcaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 126712  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||| ||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  126713 gaacaatagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 126769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 1937074 - 1936918
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1937074 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 1936975  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||  ||||||||    
T  1936974 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacctccttacctt 1936918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 32494103 - 32493947
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32494103 acatcaaattaacatattcaaacatatctctacaacataaacacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 32494004  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  32494003 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 32493947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 111326 - 111170
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  111326 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaatattgggttcatgataatcacttattttcataatcaattatgcata 111227  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| || || |||||||| ||||||||    
T  111226 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctt 111170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 15516901 - 15516720
Alignment:
Q  33 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15516901 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaa 15516802  T
Q  132 ttaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |||||||||||||||| |||||||||||||| ||||| || || || |||||| |  ||||   ||||||||| ||||||||    
T  15516801 ttaaccaaatgattatgataaagactaacccccttacatttgaagatgattaaccctaactcttgcttcaattcagctccta 15516720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 16212071 - 16212150
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  16212071 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagctca 16212150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 13352151 - 13352259
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| | ||||||||| ||||||||| |||||||||||||| | |||||||||  ||||||||||||||  |||| || ||||||||||    
T  13352151 catcaaattaacatactgaaacatatcactacaacatgagcacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatag 13352250  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  13352251 aaaaagaga 13352259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 11580693 - 11580614
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| ||||||||||| || |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  11580693 atgattatgataaagactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaagctca 11580614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 36052971 - 36053050
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  36052971 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctca 36053050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 39291565 - 39291457
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  || ||||||  ||||||||||||||  ||||  | ||||||||||    
T  39291565 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatag 39291466  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  39291465 aaaaagaga 39291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 13036958 - 13036893
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  13036958 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 13036893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 25124448 - 25124529
Alignment:
Q  138 aaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||||    
T  25124448 aaatgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaagctca 25124529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 7293333 - 7293410
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 7293410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 11516544 - 11516621
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 11516621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 15441510 - 15441433
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 15441433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 30262075 - 30261998
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 30261998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 15709469 - 15709548
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || |||||||| || |||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||    
T  15709469 atgattatgatgaagactaatcctcttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctca 15709548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 14113935 - 14113858
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| ||||||||||||||||| |||||||    
T  14113935 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagct 14113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 25292283 - 25292207
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  25292283 tgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 25292207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 17817359 - 17817313
Alignment:
Q  173 gatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  17817359 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctca 17817313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 19049642 - 19049688
Alignment:
Q  173 gatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19049642 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctca 19049688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 10000318 - 10000245
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| || ||||| ||||| |||||||| ||||| | ||||||| ||||||||||||| ||||||||||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 10000245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 13321334 - 13321411
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  ||| ||||||||| |||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacctaggcttcactttagctcctaagct 13321411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 36024452 - 36024532
Alignment:
Q  140 atgattatcataaagactaacccac-ttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| | ||||||| ||| | |||||| |||||||||||||||| |||||||| ||||||||    
T  36024452 atgattatgatgaagactaaccccccttaccttagattatgattaacctcaacttaggcttcactttagctcataagctca 36024532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 15977894 - 15977820
Alignment:
Q  19 caaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttat 93  Q
    |||||||||||| ||||||||||| |||||||   |||| |||||||||| |||  |||||| ||||||||||||    
T  15977894 caaattaacatactcaaacatatcactacaactagagcatgaatttcaaacatttagttcataataatcacttat 15977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 47480976 - 47480902
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| |||| |||||||    
T  47480976 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttacctcctaa 47480902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 14423574 - 14423509
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||||||| |||||||| |||||||||||  |  ||| ||||||||||||||||| |||||||    
T  14423574 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagct 14423509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 48622614 - 48622541
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||| ||||||||||||| ||||||||||||    
T  48622614 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 48622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 18151357 - 18151259
Alignment:
Q  19 caaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 117  Q
    ||||||||||||   || |||||| ||||||||| |||||||||||||| | ||  |||||  ||||||||||||||  ||||  | ||||||||||||    
T  18151357 caaattaacatacctaatcatatcactacaacatgagcacgaatttcaacggttaagttcacaataatcacttattcaaataagaatttatgcatagaa 18151259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 13758677 - 13758754
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  13758677 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 13758754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 15272369 - 15272164
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272369 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 15272270  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  15272269 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 15272170  T
Q  214 agctca 219  Q
    ||||||    
T  15272169 agctca 15272164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 14951960 - 14952160
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14951960 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 14952059  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| || ||||||||| |  ||||   ||||||||| |||||||||    
T  14952060 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaa 14952159  T
Q  215 g 215  Q
    |    
T  14952160 g 14952160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 5682584 - 5682429
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682584 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 5682485  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||||||| |||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  5682484 gaacaagaggaaaa-aattaactaaatgattatgataaaaactaacccacttacctt 5682429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 25119264 - 25119108
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25119264 acatcaaattaacatattcaaacatatctctaccacataagcacgaattttcaagattgggttcatgataatcacttattcccataatcaattatgcata 25119165  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| | ||||||||    
T  25119164 gaacaagagaaaaagaattaaccaaatgattatgataaaaactaactcccttacctt 25119108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 15136010 - 15135860
Alignment:
Q  70 attgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttac 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  169 cttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  15135910 cttagataaagattaatcccaacttaggcttcactttagctcctaagctca 15135860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 13246737 - 13246816
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  13246737 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctca 13246816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 19559557 - 19559689
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||  ||||||||||| ||||||||| |||| ||||||||||  |||||| ||| ||||||||||||||  |||| || |||||||||    
T  19559557 acatcaaattaacatgctcaaacatatcactacaacatgagcaggaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcata 19559656  T
Q  115 gaacaagagaaaaagaattaaccaaatgattat 147  Q
    ||| |||||| ||  ||||||| || |||||||    
T  19559657 gaaaaagagagaagaaattaactaattgattat 19559689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 49071885 - 49071994
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||| ||||||||||| |||||| || |||||||||||||| | |||||||||  || |||||||||||  |||| || |||||||||    
T  49071885 acatcaaattaacatactcaaacatatcactacaatatgagcacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcata 49071984  T
Q  115 gaacaagaga 124  Q
    ||| ||||||    
T  49071985 gaaaaagaga 49071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 122194 - 122273
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| ||||||||||| || |||||||| ||| |||||||||| |||||||| |||||||||||||| ||||||||    
T  122194 atgattatgataaagactaatccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaagctca 122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 15675041 - 15674962
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||    
T  15675041 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctca 15674962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 16609045 - 16608968
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 16608968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 26680517 - 26680594
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 26680594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 10104202 - 10104123
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| |||||||||||||| | |||||||||||||||||    
T  10104202 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctttactttagctcctaagctca 10104123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 34177691 - 34177617
Alignment:
Q  21 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 95  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||  |||||||| ||||  ||||||||||||||    
T  34177691 aattaacatactcaaacatatcactacaacatgagcacgaattttcaagattggattcacaataatcacttattc 34177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 16327872 - 16327795
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  |  ||| |||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttaccttatatgaagattaggccaaacctaggcttcaatttagctcctaagct 16327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 31132628 - 31132704
Alignment:
Q  143 attatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||| || ||||||||||| |||||||| ||| | |||||| ||||||||||||| || |||||||||||||||||    
T  31132628 attatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctccactttagctcctaagctca 31132704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 33241011 - 33241090
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| |||||||||||||||  |||| ||||||||||||    
T  33241011 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcgctttaactcctaagctca 33241090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 55376525 - 55376447
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||| || ||||||||||| |||||||| ||| | ||| || |  |||||||||||||||||||||||||||||||    
T  55376525 tgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctca 55376447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 22738577 - 22738650
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| || ||||| ||||| |||||||| ||||| | ||||||| ||||||||||||| ||||||||||||    
T  22738577 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 22738650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 32460623 - 32460561
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| ||||||||||||    
T  32460623 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 32460561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 10488879 - 10488956
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||  |||||||| ||||  |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  10488879 atgattaagataaagaccaaccaccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 10488956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 13048158 - 13048090
Alignment:
Q  149 ataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||||||||| |||| ||| |||||||||||  |  ||| |||||||||||||| ||||||||||    
T  13048158 ataaagactaacccccttaacttagatgaagattagaccaaacctaggcttcaatttaactcctaagct 13048090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 20001030 - 20001107
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  20001030 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 20001107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 40885475 - 40885418
Alignment:
Q  156 ctaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||||||| |||||||| ||| | ||||||||  ||||||||||||| |||||||||||    
T  40885475 ctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctccta 40885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 14500268 - 14500208
Alignment:
Q  20 aaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcat 80  Q
    ||||||||||| |||||| |||| | | ||||  |||||||| ||||||||||||||||||    
T  14500268 aaattaacatactcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 14500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 26339327 - 26339403
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  26339327 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 26339403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 8e-91; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 24385809 - 24385605
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24385809 acatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcataataatcacttattctcataatcaattatgcata 24385710  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  24385709 gaacaagagaaaaggaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaa 24385610  T
Q  215 gctca 219  Q
    |||||    
T  24385609 gctca 24385605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 41506866 - 41506662
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41506866 acatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 41506767  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||| |||||||||| || || |||||||| |||||||| ||| | |||||| |  |||||||||||||||||||||| |||    
T  41506766 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcttaa 41506667  T
Q  215 gctca 219  Q
    |||||    
T  41506666 gctca 41506662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 24716919 - 24716763
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24716919 acatcaaattaacatattcaaacatatctctaccatataaccacgaatttcaaagatcgggttcatgataatcacttattctcataatcaattatgcata 24716820  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  24716819 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 24716763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 39115473 - 39115629
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39115473 acatcaaattaacatattcaaacatatctttacaacataagcacgaatgtcaaagattgggttcatgataatcacttattcccataatcaattatgcata 39115572  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| || || |||||| | ||||||||    
T  39115573 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacacccttacctt 39115629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 274642 - 274797
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  274642 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 274741  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
     ||||||||||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  274742 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttacctt 274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 641207 - 641052
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  641207 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 641108  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
     ||||||||||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  641107 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttacctt 641052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 827013 - 826858
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  827013 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 826914  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
     ||||||||||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  826913 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttacctt 826858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 17502360 - 17502468
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||  |||| || ||||||||||    
T  17502360 catcaaattaacatactcaaacatatcactacaacatgagcacaaatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatag 17502459  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  17502460 aaaaagaga 17502468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 21259547 - 21259392
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||||||||||||||  |||| || ||||||||||    
T  21259547 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 21259448  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    || ||||||  |  ||||||| || ||||||| || ||  ||||||| ||||||||    
T  21259447 aaaaagagagtagaaattaactaagtgattatgatgaattctaacccccttacctt 21259392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 4234054 - 4234162
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| || |||||| ||||| ||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||    
T  4234054 catcaaattaacatactcaaacatatcactgcaacatgagcacaaatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatag 4234153  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  4234154 aaaaagaga 4234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 23218076 - 23218184
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||  |||||||||  ||||||||||||||  |||| || ||||||||||    
T  23218076 catcaaattaacatactcaaacatatcactaccacataagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 23218175  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  23218176 aaaaagaga 23218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 22321503 - 22321437
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatg 81  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  22321503 acatcaaattaacatattcaaacatatctctacaacctgagcacgaatttcaaagattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 43373424 - 43373345
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  43373424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctca 43373345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 16193674 - 16193596
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  16193674 atgattatgataaagactaaccc-cttaccttagataaagatgaatcccaacttaggcttcaatttagctcctaagctca 16193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 24928748 - 24928669
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| ||||||||||||||  ||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||    
T  24928748 atgattatgataaagactaaccccattaccttagataaagattaatcccaacttagacttcaatttagctcctaagctca 24928669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 5238404 - 5238481
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 5238481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 22907160 - 22907083
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 22907083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 24661194 - 24661117
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 24661117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 43685863 - 43685940
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 43685940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 7000551 - 7000473
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||| || || |||||||| ||||| || ||| | |||||| |  |||||||||||||||||||||||||||||||    
T  7000551 tgattatgatgaaaactaacccccttactttagataaggattaacccaaacttaggcttcaatttagctcctaagctca 7000473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 21494376 - 21494314
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| ||||||||||||    
T  21494376 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 21494314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 18118337 - 18118259
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 94  Q
    ||||||||| | |||  |||||||||||||| ||||  |||||||||||||| ||||  |||||  |||||||||||||    
T  18118337 catcaaatttatatacgcaaacatatctctataacacgagcacgaatttcaacgattaagttcacaataatcacttatt 18118259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 22886654 - 22886728
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||  |||||| |||||| ||||||||||||    
T  22886654 atgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaa 22886728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21205124 - 21205327
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21205124 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 21205223  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || |||| ||| |||||||||||||  |||||||||||||||||||||||||||    
T  21205224 gaacaagagaaaaagaattaaccaaatgattatgataaagactaatcc-cttatcttagatgaagattaattccaacttaggcttcaatttagctcctaa 21205322  T
Q  215 gctca 219  Q
    |||||    
T  21205323 gctca 21205327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21650893 - 21651097
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |    
T  21650893 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaactatgcaca 21650992  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  21650993 gaacaagagaaaaagaattaaccaaatgattatgataaatattaacccccttaccttagatgaagattaatcccaacttagacttcaatttagctcctaa 21651092  T
Q  215 gctca 219  Q
    |||||    
T  21651093 gctca 21651097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 2032008 - 2032212
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2032008 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 2032107  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||| ||| |||||| || || |||||||| |||||||| ||| | |||||| |  ||||||||||||||||||||||||||    
T  2032108 gaacaagagaaaaagaattaactaaacgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 2032207  T
Q  215 gctca 219  Q
    |||||    
T  2032208 gctca 2032212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 11342883 - 11343081
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342883 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 11342982  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| || ||||||||| |  ||| |  ||||||||| ||||||||    
T  11342983 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctccta 11343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 16105847 - 16106040
Alignment:
Q  21 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-ca 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16105847 aattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 16105946  T
Q  120 agagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||||||| || ||||   ||||||||| ||||||||    
T  16105947 agagaaaaagaattaatcaaatgattatgataaagactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctccta 16106040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 25005019 - 25005210
Alignment:
Q  20 aaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaaca 119  Q
    ||||||||| | ||||||||||| || |||||| ||||||||||||||||||||||||||  ||||||||||||||   | | || |||| |||| ||||    
T  25005019 aaattaacacactcaaacatatcacttcaacatgagcacgaatttcaaagattgggttcacaataatcacttattcaattgagcacttattcatacaaca 25005118  T
Q  120 agagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |  |||||  | | ||| |||||||||| || ||||||||||| ||||| || ||| | ||||||||  ||||||||||||| |||||||||||    
T  25005119 attgaaaa--actaaactaaatgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctccta 25005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 22662731 - 22662653
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 94  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22662731 catcaaattaacatattcaaatatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 27182503 - 27182424
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||||||||    
T  27182503 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctca 27182424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 108760 - 108681
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||| ||||||||||||    
T  108760 atgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttacctcctaagctca 108681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 23981425 - 23981358
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||||| |||||||  ||||||||||||||  |||||||||||||||||||||||||||||||    
T  23981425 aagactaacccccttacctaagatgaagattaatccaaacttaggcttcaatttagctcctaagctca 23981358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 18531018 - 18530941
Alignment:
Q  142 gattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||| || ||||||||||| |||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||    
T  18531018 gattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctca 18530941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 20623286 - 20623363
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 20623363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 21233474 - 21233397
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 21233397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 37053061 - 37053138
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 37053138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 22053785 - 22053706
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| |||||||||| ||||| |||||||||||||||||    
T  22053785 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttagacttcactttagctcctaagctca 22053706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 16536514 - 16536591
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||| ||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  16536514 atgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 16536591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 23507270 - 23507347
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||  ||||||| |||||| |||| ||||||||||    
T  23507270 atgattatgataaagactaacccccttaccttagataaagattaattccaacttatgcttcactttaactcctaagct 23507347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 25900352 - 25900275
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| ||||||| |||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagct 25900275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 7529240 - 7529299
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcc 211  Q
    ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| |||||||||    
T  7529240 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcc 7529299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 1219469 - 1219392
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  1219469 atgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 1219392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 32951024 - 32951089
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||||||| ||||||||  || | |||||||   ||||||| |||||||||||||||||||||    
T  32951024 aagactaacccccttaccttaaataatgattaattcaaacttagacttcaatttagctcctaagct 32951089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 23328865 - 23328941
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  23328865 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 23328941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 24616469 - 24616545
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  24616469 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 24616545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 24712845 - 24712921
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  24712845 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 24712921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 24745863 - 24745939
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  24745863 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 24745939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 9652953 - 9652753
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9652953 acatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 9652854  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  9652853 gaacaagaaaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggtttcaatttagctcctaa 9652754  T
Q  215 g 215  Q
    |    
T  9652753 g 9652753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 21274106 - 21273902
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21274106 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 21274007  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||| ||    
T  21274006 gaatcaagagaaaaagaattaatcaaatgattatgataaagactaaccc-cttaccttagataaagattaatcccaacttaggcttcactttagctcata 21273908  T
Q  214 agctca 219  Q
    ||||||    
T  21273907 agctca 21273902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 22274920 - 22275076
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22274920 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 22275019  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||    
T  22275020 gaacaagagaaaaagaattaactaaatgattatgataaaggctaacccccttacctt 22275076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 22284153 - 22284309
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  22284153 acattaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgagttcatgataatcacttattctcataatcaaatatgcata 22284252  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  22284253 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 22284309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 25213252 - 25213403
Alignment:
Q  21 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-ca 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25213252 aattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 25213351  T
Q  120 agagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  25213352 agagaaaaagaattaatcaaatgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 15633418 - 15633568
Alignment:
Q  21 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaa 120  Q
    |||||||||| |||||| |||| | | ||||  |||||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15633418 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaa 15633517  T
Q  121 gagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||| || ||||||| |||||||||||||  ||||||||    
T  15633518 gagaaaaagaattaactaagtgattatgataaagactaacctccttacctt 15633568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 463043 - 463122
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctca 463122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 22863235 - 22863314
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  22863235 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggctgcaatttagctcctaagctca 22863314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 7321716 - 7321871
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||| ||||||||||  |||| ||  |||||||||    
T  7321716 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaatagtcacttattcaaataagcacgtatgcatag 7321815  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
     | ||||||  |  ||||||| || ||||||| || ||  ||||||| ||||||||    
T  7321816 gaaaagagagtagaaattaactaagtgattataatgaattctaacccccttacctt 7321871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 8891549 - 8891628
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| ||||||||||||||  ||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||    
T  8891549 atgattatgataaagactaacccctttaccttagataaagattaatcccaacttaggcttcaatttagttcctaagctca 8891628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 24341341 - 24341262
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||    
T  24341341 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcattttagctcctaagctca 24341262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 36982396 - 36982317
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||| ||||  ||||||||||||||||||||||||| ||||||    
T  36982396 atgattatgataaagactaacccccttaccttagataaagactaataccaacttaggcttcaatttagctcctcagctca 36982317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 14906386 - 14906309
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 14906309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 23820388 - 23820465
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 23820465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 19689347 - 19689270
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  |  ||| |||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagct 19689270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 17396599 - 17396520
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  |  ||| ||||||| |||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctca 17396520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 20015328 - 20015403
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaag 215  Q
    ||||| || |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 20015403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 20279610 - 20279688
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 94  Q
    ||||||||| | |||  |||||||||||||| ||||| |||||||||||||| ||||  |||||  |||||||||||||    
T  20279610 catcaaattcatatacccaaacatatctctataacatgagcacgaatttcaacgattaagttcaccataatcacttatt 20279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 32466177 - 32466254
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||| || ||||||||||| |||||||| ||| | ||| || |  |||||||||||||||||||||||||||||||    
T  32466177 tgattatgatgaagactaaccc-cttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctca 32466254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 33128372 - 33128446
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||  ||||||||||||| ||||||||||||    
T  33128372 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttagctcctaa 33128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 12641591 - 12641514
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| |||||||||||| |  ||||   ||||||||||||||||||||||    
T  12641591 atgattatgataataactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaagct 12641514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 21142203 - 21142276
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||| ||||||||||||| ||||||||||||    
T  21142203 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 21142276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 25265335 - 25265258
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| || ||||||||||| ||||| || ||| | ||||||||  ||| ||||||||| |||||||||||||||    
T  25265335 atgattatgatgaagactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcctaagct 25265258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 5888578 - 5888505
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||| |||||| |||||| ||||||||||||    
T  5888578 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaagcttcactttagctcctaa 5888505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 8944153 - 8944230
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 8944230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 12635817 - 12635740
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  12635817 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 12635740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 12728699 - 12728776
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  12728699 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 12728776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 34824782 - 34824859
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  34824782 atgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 34824859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 23774444 - 23774520
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  23774444 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 23774520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 1035 - 835
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1035 acatcaaattaacatattaaaacaaacctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 936  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  935 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 836  T
Q  215 g 215  Q
    |    
T  835 g 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 6601 - 6396
Alignment:
Q  14 gacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  6601 gacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataagcacctattatcataatcaattatgcat 6502  T
Q  114 agaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| | || ||||| ||||||||||||||||||||||||||    
T  6501 agaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagataaggaataatcccaacttaggcttcaatttagctccta 6402  T
Q  214 agctca 219  Q
    ||||||    
T  6401 agctca 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 23995121 - 23995326
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23995121 acatcaaattaacatatccaaacatatctctacaacataagcacgaattccaaatattgggttcatgataatcacttattctcataatcaattatgcata 23995220  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  23995221 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 23995320  T
Q  214 agctca 219  Q
    ||||||    
T  23995321 agctca 23995326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 26089933 - 26090138
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26089933 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 26090032  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | | | | | ||||| ||||||||||||| |||||||||||    
T  26090033 gaatcaagagaaaaagaattaatcaaatgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggcttcactttagctccta 26090132  T
Q  214 agctca 219  Q
    | ||||    
T  26090133 acctca 26090138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 15742275 - 15742078
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15742275 catcaaattaacataatcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcat-g 15742177  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| | | | ||||||||  ||||||||||||| ||||||||||||    
T  15742176 aacaagagaaaaagaattaaccaaaggattatgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 15742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 18002553 - 18002353
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  18002553 acatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatgcccataatcaattatgcata 18002454  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| | | | ||||||||| ||||||| ||||| |||||||||||    
T  18002453 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaggttatgattaatctaaacttagccttcactttagctccta 18002354  T
Q  214 a 214  Q
    |    
T  18002353 a 18002353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 19983349 - 19983193
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19983349 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcata 19983250  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  19983249 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 19983193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 35015214 - 35015058
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35015214 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 35015115  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  35015114 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 35015058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 4991271 - 4991427
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4991271 acatcaaat-aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 4991369  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
     || |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  4991370 aaatcaagagaaaaagaattaaacaaatgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 18583515 - 18583671
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  18583515 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaatgatgcata 18583614  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||| |||||||||||||||| |||||||||| || || |||||||| ||||||||    
T  18583615 gaacaggagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctt 18583671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 22585602 - 22585494
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||    
T  22585602 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatag 22585503  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  22585502 aaaaagaga 22585494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 22590433 - 22590325
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||    
T  22590433 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatag 22590334  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  22590333 aaaaagaga 22590325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 15889762 - 15889631
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||  |||||||| |||||  |||| || ||||||||||    
T  15889762 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacacttatgcatag 15889663  T
Q  116 aacaagagaaaaagaattaaccaaatgattat 147  Q
    || |||||| ||  ||||||| || |||||||    
T  15889662 aaaaagagagaagaaattaactaagtgattat 15889631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 15004963 - 15004855
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||    
T  15004963 acatcaaatta-catactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 15004865  T
Q  115 gaacaagaga 124  Q
    ||| ||||||    
T  15004864 gaaaaagaga 15004855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 25640611 - 25640504
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||||||||||||||  |||| || ||||||||||    
T  25640611 catcaaattaacatactcaaacatatc-ctacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 25640513  T
Q  116 aacaagaga 124  Q
    || ||||||    
T  25640512 aaaaagaga 25640504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 23148303 - 23148382
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||||||||    
T  23148303 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctca 23148382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 23153754 - 23153833
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||||||||    
T  23153754 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctca 23153833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 27751742 - 27751821
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttcaatttagctcctaagctca 27751821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 29666181 - 29666260
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||||||||  || ||| | ||||||||  |||||||||||||||||||||||||||||||    
T  29666181 atgattatgatgaagactaacccacttatgttagataatgattaatccaaacttaggcttcaatttagctcctaagctca 29666260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 1650053 - 1649976
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  |  ||| |||||||||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagct 1649976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 32276691 - 32276617
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  |||||| |||||| ||||||||||||    
T  32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 32276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 16299906 - 16299844
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||| |||||||| | | | ||||||||  ||||||||||||| ||||||||||||    
T  16299906 aagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 16299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 17459 - 17261
Alignment:
Q  17 atcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 116  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17459 atcaaattaacatattcaaacatatctctaccacataagcactaatttcaaagattgggttcatgataatcaattattctcataatcaattatgcataga 17360  T
Q  117 acaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaag 215  Q
    |||||||||||||||||| | |||||||||| |||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  17359 acaagagaaaaagaattacctaaatgattatgataaagactaacccgcttaccttagatggagattaatcccaacttaggcttcaatttagctcctaag 17261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 12574 - 12371
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  12574 catcaaattaacatattcaaacatatctctacaacataagcacaaatttcaaagattgggttcatgataataacttattcccataatcaattatgcatag 12475  T
Q  116 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaag 215  Q
    ||||| ||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||| |||||| ||| |||||||| |||||||||||||||||||    
T  12474 aacaaaagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttagataaagattcatcccaacttagacttcaatttagctcctaag 12375  T
Q  216 ctca 219  Q
    ||||    
T  12374 ctca 12371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 15861483 - 15861285
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15861483 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 15861384  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| || || |||||| |  ||||   ||||||||| ||||||||    
T  15861383 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctccta 15861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 21860209 - 21860365
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21860209 acatcaaattaacatattcaaacatatctctaccacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 21860308  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  21860309 gaacaagagaaaaagaattaaccaaatgattatgataaaaactaacccccttacctt 21860365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 44035028 - 44034872
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44035028 acatcaaattaacatattcaaacatatatctacaacataaacaagaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 44034929  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  44034928 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 44034872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22367216 - 22367296
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22367216 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 41218667 - 41218759
Alignment:
Q  79 atgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || || || |||||||| ||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttacctt 41218759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 37844406 - 37844327
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||    
T  37844406 atgattatgataaagactaacccccttaccttagataaaaattaatcccaacttaggcttcaatttagctcctaagctca 37844327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20445987 - 20446066
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  20445987 atgattatgataaagactaactcccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctca 20446066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 20893583 - 20893504
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||||||||    
T  20893583 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctca 20893504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20913335 - 20913414
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||  |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  20913335 atgattacgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctca 20913414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20931650 - 20931729
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||| ||||||| |||||||| ||| |||||||||| |||||||||||||| ||||||| |||||||||    
T  20931650 atgattatgataaaggctaacccccttaccttagataaagattaatcccaacttaggcttcactttagctgctaagctca 20931729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20531751 - 20531830
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||    |||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  20531751 atgattatgataaagactaatttccttaccttagataaagattaatcccaacttaggcttcaatttatctcctaagctca 20531830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 45051726 - 45051803
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  |  ||| |||||||||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagct 45051803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 51452809 - 51452886
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||  |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 51452886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 7640882 - 7640806
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| |  ||||   ||||||||||||||||||||||    
T  7640882 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagct 7640806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 193545 - 193350
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  193545 acatcaaattaacatattcaaacatatctct---------gcacgaatttcaatgattgggttcatgataatcacttattctcataatcaattatgcata 193455  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||| |||||||||||||| ||||||||||||    
T  193454 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaa 193355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 80062 - 80218
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  80062 acatcaaattaacatattcaaacatatctctaccacataagcacaaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 80161  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  80162 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 80218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 129; Significance: 6e-67; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 6140 - 5984
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6140 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 6041  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||||| | |||||||| || || |||||||| ||||||||    
T  6040 gaacaagagaaaaagaattaactatatgattatgatgaaaactaacccccttacctt 5984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 5923 - 5778
Alignment:
Q  26 acatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 125  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  126 aaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||||||||| | |||||||| || || |||||||| ||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttacctt 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 129; Significance: 6e-67; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 4504 - 4304
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4504 acatcaaattaacatatttaaacatatctctacaacataagcactaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 4405  T
Q  115 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |||  ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| | | | ||||||||  |||||  |||||| |||||||||||    
T  4404 gaatgaagagaaaaagaattaaccaaatgattatgataaagtctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctccta 4305  T
Q  214 a 214  Q
    |    
T  4304 a 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 85 - 5
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  85 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 162233 - 162079
Alignment:
Q  17 atcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 116  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162233 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 162134  T
Q  117 acaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||| | |||||||| || || |||||||| ||||||||    
T  162133 acaagagaaaaagaattaactagatgattatgatgaaaactaacccccttacctt 162079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 166319 - 166165
Alignment:
Q  17 atcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 116  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  166319 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 166220  T
Q  117 acaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||||||| | |||||||| || || |||||||| ||||||||    
T  166219 acaagagaaaaagaattaactagatgattatgatgaaaactaacccccttacctt 166165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 31337 - 31181
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31337 acatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 31238  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||||||||||| |||||||| |||||||| | ||||| |||||||| ||||||||    
T  31237 gaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttacctt 31181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 125; Significance: 1e-64; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 41507 - 41663
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41507 acatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 41606  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||||||||||| |||||||| |||||||| | ||||| |||||||| ||||||||    
T  41607 gaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttacctt 41663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 37012 - 36935
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 36935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 120; Significance: 1e-61; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 130760 - 130911
Alignment:
Q  21 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-ca 119  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  130760 aattaacgtatccaaacatatctctacaacatgagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 130859  T
Q  120 agagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  130860 agagaaaaagaattaatcaaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 89398 - 89331
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  89398 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctca 89331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 107728 - 107661
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  107728 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctca 107661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 117; Significance: 9e-60; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 42568 - 42708
Alignment:
Q  31 ttcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 130  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42568 ttcaaccatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 42667  T
Q  131 attaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||| |||||||||| ||||| |||||||| ||||||||    
T  42668 attaactaaatgattatgataaaaactaacccccttacctt 42708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 13824 - 13890
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaattta 206  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| ||||    
T  13824 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcacttta 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 30292 - 30448
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  30292 acatcaaattaacatattcaaacatatctctacaacataagcatgaatttcaaagatagggttcatgataatcacttattcccataatcaattatgcata 30391  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    |||||||||||||| ||||||| |||||||||| || || | |||||| ||||||||    
T  30392 gaacaagagaaaaataattaactaaatgattatgatgaaaaataacccccttacctt 30448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 508 - 353
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 114  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  508 acatcaaattaacatattcaaatatatctctacaacataagcacaaatttcaaatattgggttcatgataatcacttattctcataatcaattatgcata 409  T
Q  115 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 171  Q
    ||||||||| |||||||||||| | |||||||| ||||||| ||||||  |||||||    
T  408 gaacaagag-aaaagaattaactagatgattatgataaagaataaccccgttacctt 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 15147 - 15236
Alignment:
Q  15 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15147 acatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatca 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 914 - 837
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| || ||||||||| | |||||   | ||||||| ||||||||||||    
T  914 atgattatgataaagactaacccccttaccttagaagaagattaaccccaactcttgattcaattcagctcctaagct 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 15238 - 15272
Alignment:
Q  181 ttaatctcaacttaggcttcaatttagctcctaag 215  Q
    |||||| ||||||||||||||||||||||||||||    
T  15238 ttaatcccaacttaggcttcaatttagctcctaag 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 44170 - 44039
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 115  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||  ||||||||||||||  ||||||| ||||||||||    
T  44170 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcacttattcaaataatcacttatgcatag 44071  T
Q  116 aacaagagaaaaagaattaaccaaatgattat 147  Q
     | |||||| ||  ||||||| || |||||||    
T  44070 caaaagagagaagaaattaactaagtgattat 44039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 26372 - 26293
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  26372 atgattatgataaagactaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaagctca 26293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 12063 - 12140
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| || ||||||||||| |||| ||| ||| | ||||||||  ||||| |||||||||||||||||||||||    
T  12063 atgattatgatgaagactaacccccttatcttagataatgattaatccaaactttggcttcaatttagctcctaagct 12140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 8125 - 8051
Alignment:
Q  140 atgattatcataaagactaacccac-ttaccttggatgaagattaatctcaacttaggcttcaatttagctccta 213  Q
    |||||||| || ||||||||||| | ||||||| ||| | ||||||||  ||||||||||||| |||||||||||    
T  8125 atgattatgatgaagactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctccta 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 146906 - 146985
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  146906 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctca 146985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 9160 - 9239
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| || ||||||||| |||||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||    
T  9160 atgattatgatgaagactaacacacttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctca 9239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 247398 - 247320
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctc 218  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  247398 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctc 247320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 34107 - 34030
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| || ||||||||||| |||||||| |||||||||||| |  ||||   ||||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaagct 34030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 305 - 384
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 95  Q
    ||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||||||  ||||||||||||||    
T  305 catcaaattaacatactcaaacatatcactacaacatgagcaagaatttcaaagattgggttcacaataatcacttattc 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 1557 - 1478
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 95  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||| ||||||    
T  1557 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcatttattc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 9183 - 9262
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  9183 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctca 9262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 1430 - 1509
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  1430 atgattatgataaagactaacccccttaccttagataaagattaatcacaacttaggcttcactttagctcctaagctca 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 3540 - 3461
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| | |||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  3540 atgattatgacaaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctca 3461  T

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Target: scaffold0001 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 172210 - 172289
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  172210 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctca 172289  T

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Target: scaffold0001; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 177913 - 177992
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  177913 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctca 177992  T

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Target: scaffold0058 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 57427 - 57345
Alignment:
Q  137 caaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||||| |||||||||    
T  57427 caaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaagctca 57345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 272330 - 272409
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||||||||| ||||||    
T  272330 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctgagctca 272409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12418 - 12497
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| |||  |||||||||  ||||||||||||| |||||||||||||||||    
T  12418 atgattatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaagctca 12497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 51140 - 51061
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| ||||||||||| |  |||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  51140 atgattatgataaagactaatctccttacctaagataaagattaatcccaacttaggcttcaatttagctcctaagctca 51061  T

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Target: scaffold0011 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 123107 - 123040
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||||||||    
T  123107 aagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctca 123040  T

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Target: scaffold0008 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 128127 - 128048
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| |||| ||||||| ||||    
T  128127 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcattttatctcctaatctca 128048  T

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Target: scaffold0141 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 22857 - 22934
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 22934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 27112 - 27189
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 27189  T

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Target: scaffold0124 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 1528 - 1451
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 42034 - 42113
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||| ||||| |||||||| ||| || ||||||| |||||||| |||||||||| ||||||||||||    
T  42034 atgattatgataaagaccaacccccttaccttagataaatattaatcccaacttagacttcaatttacctcctaagctca 42113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 3897 - 3785
Alignment:
Q  16 catcaaattaacatattcaaacatatct----ctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgc 111  Q
    ||||||||||||||| |||||||||| |    ||||||||| |||||||||||||||  |||| ||||  ||||||||||||||  |||| || ||||||    
T  3897 catcaaattaacatactcaaacatatatatcactacaacatgagcacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgc 3798  T
Q  112 atagaacaagaga 124  Q
    |||||| ||||||    
T  3797 atagaaaaagaga 3785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 339 - 413
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaag 215  Q
    ||||||| || ||||||||||| |||||||| ||| | ||||||||  |||||||||||||||||||||||||||    
T  339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaag 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 25532 - 25610
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    ||||||| || ||||||||||| |||||||| ||| | |||||| |  |||||||||||||||||||||||||||||||    
T  25532 tgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagctca 25610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 5846 - 5923
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 36869 - 36787
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttca---atttagctcctaagctca 219  Q
    |||||||| |||||||||||||| ||||||||  || |||||||||| ||||||||||||||    |||||||||||||||||    
T  36869 atgattatgataaagactaacccccttaccttaaataaagattaatcccaacttaggcttcacttctttagctcctaagctca 36787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 34340 - 34266
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| ||||||||||||    
T  34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaa 34266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 45338 - 45416
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctc 218  Q
    |||||||| || ||||||||||| |||||||| ||| | | ||||||  |||||||||||||||| |||||||||||||    
T  45338 atgattatgatgaagactaacccccttaccttagataatggttaatccaaacttaggcttcaattaagctcctaagctc 45416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 54724 - 54802
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctc 218  Q
    |||||||| || ||||||||||  |||||||| ||| | | ||||||  |||||| ||||||||| |||||||||||||    
T  54724 atgattatgatgaagactaaccaccttaccttagataatggttaatccaaacttaagcttcaattaagctcctaagctc 54802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 6024 - 5945
Alignment:
Q  138 aaatgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    |||||||||| |||||||||||||| |||||||| |||  |||||||||  ||||   ||||||||| ||||||||||||    
T  6024 aaatgattatgataaagactaacccccttaccttagatagagattaatcctaactcttgcttcaattcagctcctaagct 5945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 9282 - 9223
Alignment:
Q  155 actaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| |||||||| ||||| | ||||||| ||||||||||||| ||||||||||||    
T  9282 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 9223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 16180 - 16121
Alignment:
Q  155 actaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| |||||||| ||||| | ||||||| ||||||||||||| ||||||||||||    
T  16180 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 48903 - 48982
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagctca 219  Q
    |||||||| |||||||||||||| |||||||| | | | | | ||||| ||||||||||| | |||||||||||||||||    
T  48903 atgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggctttactttagctcctaagctca 48982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 18026 - 18100
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| |||| |||||||    
T  18026 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttaactcctaa 18100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 41965 - 42039
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||  ||||||||||||| ||||||||||||    
T  41965 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 42039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 12075 - 12002
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| ||||  |||||||| |||||||| ||||| | ||||| | ||||||||||||| ||||||||||||    
T  12075 tgattatgataataactaacccccttaccttagatgatgtttaattttaacttaggcttcactttagctcctaa 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 10276 - 10211
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaagct 217  Q
    ||||| ||||| |||||||| ||||| |||||| | |||||||||||||| |||||||| ||||||    
T  10276 aagacaaacccccttaccttagatgatgattaaccccaacttaggcttcactttagctcataagct 10211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 6082 - 6133
Alignment:
Q  16 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 67  Q
    |||||| |||||||| ||||||||||| ||||||||| ||||| ||||||||    
T  6082 catcaatttaacatactcaaacatatcactacaacatgagcacaaatttcaa 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 5508 - 5434
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||  | ||||||||||| ||||||||||||    
T  5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 5549 - 5623
Alignment:
Q  140 atgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||  ||||| ||||||| ||||||||||||    
T  5549 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaa 5623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 49772 - 49710
Alignment:
Q  152 aagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||||||| |||||||| | | | ||||||||  ||||||||||||| ||||||||||||    
T  49772 aagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 49710  T

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Target: scaffold0892 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 3750 - 3799
Alignment:
Q  165 ttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| ||||| | ||||||| ||||||||||||| ||||||||||||    
T  3750 ttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 3799  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 54182 - 54255
Alignment:
Q  141 tgattatcataaagactaacccacttaccttggatgaagattaatctcaacttaggcttcaatttagctcctaa 214  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||| ||||||||||||| | ||||||||||    
T  54182 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactatagctcctaa 54255  T

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