View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8266_high_11 (Length: 301)
Name: NF8266_high_11
Description: NF8266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8266_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 18319898 - 18319615
Alignment:
| Q |
1 |
caaccctaaaacctaacaaaggagttttgttaaacctagaattaacaatctcttgaacgagatttggagttaaatgtttgctaaaataaaaaatgaaacg |
100 |
Q |
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| T |
18319898 |
caaccctaaaacctaacaaaggagttttgttaaacctagaattaacaatctcttgaacgagatttggagttaaatgtttactaaaataaaaaatgaaacg |
18319799 |
T |
|
| Q |
101 |
gtcgaatgaagtgtaacgaacgaaaacggttgaagcgagtttgacgaaccaggcgtcagctcttctgatggtacccattgtgggaacggcggcatcggag |
200 |
Q |
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| T |
18319798 |
gtcgaatgaagtgtaacgaacgaaaacggttgaagcgagtttgacgaaccaggcgtcagctcttctaatgggacccattgtgggaagggcggcatcggag |
18319699 |
T |
|
| Q |
201 |
agtgtcacgtgccgaggaacagcattggtggtggaagcacgtgcgggatggttgagatttgagtcacgaggttgatgatccatt |
284 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
18319698 |
agtgtcacgtgccgaggaacagcattcgtggtggaagcacgtgcgggatggttgagatttgaatcacgaggttgatgatccatt |
18319615 |
T |
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