View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8267_low_2 (Length: 567)

Name: NF8267_low_2
Description: NF8267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8267_low_2
NF8267_low_2
[»] chr3 (31 HSPs)
chr3 (18-195)||(42575887-42576064)
chr3 (319-548)||(42576168-42576396)
chr3 (263-318)||(42576062-42576117)
chr3 (422-497)||(10856676-10856750)
chr3 (422-493)||(51734611-51734680)
chr3 (422-497)||(53966212-53966287)
chr3 (421-493)||(15820659-15820731)
chr3 (422-497)||(10450698-10450773)
chr3 (422-497)||(48511460-48511535)
chr3 (447-497)||(5321586-5321636)
chr3 (423-497)||(9179114-9179187)
chr3 (419-497)||(48837058-48837135)
chr3 (428-497)||(9178893-9178961)
chr3 (422-497)||(10453753-10453826)
chr3 (422-494)||(24453758-24453829)
chr3 (422-497)||(9180348-9180422)
chr3 (422-493)||(10450478-10450549)
chr3 (422-497)||(11244591-11244666)
chr3 (447-497)||(22666368-22666418)
chr3 (447-497)||(48511689-48511739)
chr3 (447-497)||(54369043-54369093)
chr3 (433-495)||(2800013-2800073)
chr3 (425-496)||(16060936-16061006)
chr3 (422-493)||(42190530-42190601)
chr3 (447-497)||(27219333-27219383)
chr3 (447-497)||(41380728-41380778)
chr3 (447-497)||(43101421-43101471)
chr3 (447-497)||(44573330-44573380)
chr3 (447-497)||(47833712-47833762)
chr3 (425-494)||(16045423-16045491)
chr3 (421-476)||(10453956-10454009)
[»] chr7 (30 HSPs)
chr7 (422-497)||(39550028-39550102)
chr7 (422-497)||(34748757-34748832)
chr7 (422-497)||(36092649-36092722)
chr7 (422-497)||(36270520-36270594)
chr7 (420-497)||(36495643-36495720)
chr7 (422-497)||(33909116-33909191)
chr7 (422-497)||(36495868-36495943)
chr7 (422-497)||(37755988-37756063)
chr7 (422-497)||(37756214-37756289)
chr7 (422-497)||(37761962-37762037)
chr7 (422-497)||(44314354-44314429)
chr7 (447-497)||(43384330-43384380)
chr7 (422-494)||(27585235-27585307)
chr7 (422-498)||(19843687-19843762)
chr7 (421-497)||(36270747-36270823)
chr7 (420-497)||(37530973-37531052)
chr7 (422-497)||(20296243-20296317)
chr7 (422-497)||(22206328-22206402)
chr7 (422-497)||(22228337-22228411)
chr7 (422-497)||(22686783-22686857)
chr7 (422-497)||(47346144-47346219)
chr7 (422-497)||(47346373-47346448)
chr7 (448-497)||(43383996-43384045)
chr7 (447-497)||(257317-257367)
chr7 (447-497)||(7135293-7135343)
chr7 (422-496)||(34914971-34915045)
chr7 (447-497)||(37272095-37272145)
chr7 (426-471)||(27729554-27729598)
chr7 (448-497)||(40121989-40122038)
chr7 (422-497)||(36092442-36092515)
[»] chr1 (28 HSPs)
chr1 (422-496)||(45443200-45443273)
chr1 (421-497)||(12287827-12287902)
chr1 (422-497)||(17294957-17295032)
chr1 (421-497)||(18585017-18585092)
chr1 (422-497)||(33562177-33562252)
chr1 (422-497)||(40521543-40521617)
chr1 (422-497)||(45858635-45858709)
chr1 (430-497)||(28509437-28509506)
chr1 (422-494)||(31411613-31411685)
chr1 (422-497)||(29228654-29228729)
chr1 (422-493)||(51722232-51722303)
chr1 (431-492)||(20208137-20208196)
chr1 (431-492)||(20208436-20208495)
chr1 (447-497)||(40642826-40642876)
chr1 (421-493)||(4187567-4187639)
chr1 (421-497)||(29228426-29228502)
chr1 (422-477)||(17294846-17294901)
chr1 (422-495)||(29383675-29383747)
chr1 (447-497)||(2697381-2697431)
chr1 (447-497)||(4022175-4022225)
chr1 (447-497)||(19937093-19937143)
chr1 (447-497)||(38474287-38474337)
chr1 (422-493)||(4187336-4187407)
chr1 (422-497)||(30604510-30604585)
chr1 (447-497)||(17419791-17419841)
chr1 (423-497)||(27958097-27958170)
chr1 (447-496)||(8520144-8520193)
chr1 (422-482)||(31411423-31411483)
[»] chr2 (22 HSPs)
chr2 (421-497)||(4506090-4506165)
chr2 (422-497)||(10862108-10862182)
chr2 (422-498)||(32197182-32197257)
chr2 (422-497)||(11349843-11349918)
chr2 (422-497)||(32810926-32811001)
chr2 (422-497)||(33532786-33532860)
chr2 (421-497)||(39420675-39420751)
chr2 (422-497)||(4342308-4342382)
chr2 (422-497)||(11350237-11350312)
chr2 (422-497)||(15962207-15962282)
chr2 (422-497)||(28193625-28193699)
chr2 (423-497)||(936792-936866)
chr2 (447-497)||(18901914-18901964)
chr2 (422-497)||(14280259-14280334)
chr2 (422-494)||(28193388-28193459)
chr2 (422-497)||(10861884-10861958)
chr2 (422-497)||(10862286-10862360)
chr2 (447-497)||(3976521-3976571)
chr2 (447-497)||(3977053-3977103)
chr2 (447-497)||(7877848-7877898)
chr2 (447-497)||(43169246-43169296)
chr2 (447-496)||(30166130-30166179)
[»] chr8 (17 HSPs)
chr8 (422-497)||(15711476-15711550)
chr8 (422-497)||(38287787-38287861)
chr8 (421-498)||(35908657-35908733)
chr8 (422-498)||(18464049-18464125)
chr8 (422-497)||(39587908-39587981)
chr8 (422-497)||(9596043-9596117)
chr8 (422-497)||(14019787-14019862)
chr8 (422-497)||(20232447-20232522)
chr8 (422-497)||(17607264-17607338)
chr8 (422-498)||(9596268-9596343)
chr8 (447-497)||(8276553-8276603)
chr8 (422-497)||(8605470-8605544)
chr8 (447-497)||(18905860-18905910)
chr8 (447-497)||(21085198-21085248)
chr8 (447-497)||(32931405-32931455)
chr8 (447-497)||(34248081-34248131)
chr8 (451-497)||(35561674-35561720)
[»] chr6 (14 HSPs)
chr6 (421-497)||(33396285-33396361)
chr6 (422-497)||(26842699-26842774)
chr6 (421-498)||(25183981-25184058)
chr6 (422-497)||(33396505-33396579)
chr6 (447-497)||(25184214-25184264)
chr6 (447-497)||(8144021-8144071)
chr6 (447-497)||(21067107-21067157)
chr6 (447-497)||(21088898-21088948)
chr6 (447-497)||(26339892-26339942)
chr6 (447-496)||(24055160-24055209)
chr6 (449-497)||(1744892-1744940)
chr6 (449-497)||(12134533-12134581)
chr6 (449-497)||(27443587-27443635)
chr6 (447-495)||(30539239-30539287)
[»] chr4 (20 HSPs)
chr4 (421-497)||(33912022-33912097)
chr4 (422-494)||(4026053-4026124)
chr4 (421-497)||(37097781-37097856)
chr4 (422-497)||(11290148-11290223)
chr4 (422-497)||(46528973-46529047)
chr4 (421-494)||(37288922-37288994)
chr4 (422-497)||(26941841-26941915)
chr4 (422-497)||(50868063-50868138)
chr4 (422-497)||(52810675-52810749)
chr4 (422-497)||(52810902-52810976)
chr4 (447-497)||(51469485-51469535)
chr4 (422-497)||(2016512-2016586)
chr4 (447-497)||(15665157-15665207)
chr4 (447-497)||(22867088-22867138)
chr4 (447-497)||(29669413-29669463)
chr4 (430-491)||(43798183-43798242)
chr4 (424-494)||(47845769-47845839)
chr4 (447-497)||(48843067-48843117)
chr4 (447-493)||(51470487-51470533)
chr4 (447-497)||(53740186-53740236)
[»] chr5 (23 HSPs)
chr5 (422-497)||(22196603-22196677)
chr5 (422-497)||(30329815-30329890)
chr5 (424-497)||(22196376-22196448)
chr5 (422-496)||(14769883-14769956)
chr5 (422-497)||(83860-83935)
chr5 (422-497)||(84084-84159)
chr5 (422-497)||(32395364-32395439)
chr5 (422-489)||(33040264-33040331)
chr5 (422-497)||(19439840-19439914)
chr5 (422-491)||(33040449-33040518)
chr5 (447-497)||(38131768-38131818)
chr5 (430-497)||(39668467-39668532)
chr5 (422-497)||(2471743-2471817)
chr5 (422-497)||(5095946-5096021)
chr5 (422-477)||(18541930-18541984)
chr5 (422-497)||(29396393-29396468)
chr5 (447-497)||(873746-873796)
chr5 (447-497)||(1028143-1028193)
chr5 (447-497)||(37995684-37995734)
chr5 (447-496)||(27760079-27760128)
chr5 (422-498)||(9850449-9850528)
chr5 (422-497)||(18541703-18541776)
chr5 (422-493)||(24792320-24792392)
[»] scaffold0012 (1 HSPs)
scaffold0012 (422-497)||(165764-165838)
[»] scaffold0785 (1 HSPs)
scaffold0785 (447-497)||(3170-3220)
[»] scaffold0166 (1 HSPs)
scaffold0166 (422-493)||(34703-34775)
[»] scaffold0003 (1 HSPs)
scaffold0003 (449-497)||(43726-43774)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 1e-95; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 42575887 - 42576064
Alignment:
Q  18 ctaaccaatctaacacagacaaaaaaccacccaaggaactagagacactccaacgaaaagctgcaactccaccctgcaataaagaaagaaaagtagaacc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42575887 ctaaccaatctaacacagacaaaaaaccacccaaggaactagagacactccaacgaaaagctgcaactccaccctgcaataaagaaagaaaagtagaacc 42575986  T
Q  118 cataggatgggcaagatggacaaccgccccacaccccccaccgaatagcaacagaactcacaccaccacaagacttta 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42575987 cataggatgggcaagatggacaaccgccccacaccccccaccgaatagcaacagaactcacaccaccacaagacttta 42576064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 319 - 548
Target Start/End: Original strand, 42576168 - 42576396
Alignment:
Q  319 atttgataacatattcatatattgggaaaaacttgatatgtattttgcaatttaatagatccattttaaaatactgataatgcgaggactaactaatgca 418  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42576168 atttgataacatattcatatattgggaaaaacttgatatgcattttgcaatttaatagatccattttaaaatactgataatgcaaggactaactaatgca 42576267  T
Q  419 acctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagagatttataaactaatgcaacct 518  Q
    ||||||||  |||||||||| |||||  |||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  42576268 acctgttattggccaacacttggtgg-gatttagtcccacatcggattgataagattctcaagaagagtttataaagagatttataaactaatgcaacct 42576366  T
Q  519 caagtgttacatatttatcatttattttag 548  Q
    | || |||||| ||||||||||||||||||    
T  42576367 cgagcgttacagatttatcatttattttag 42576396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 42576062 - 42576117
Alignment:
Q  263 ttaggaattactttcagactaaaaacttcaccctgttcactaaatgcaagacgagg 318  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42576062 ttaggaattactttcaggctaaaaacttcaccctgttcactaaatgcaagacgagg 42576117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 10856750 - 10856676
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||| ||| |||||  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  10856750 tgttagcggccaatacttggtggg-atttagtcccacatcggatggataggattcttgaaaagagtttataaagag 10856676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 493
Target Start/End: Complemental strand, 51734680 - 51734611
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    ||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  51734680 tgttagcagccaacactcggtgg--atttagtcccacatcggatagataggattcttgagaagagtttataa 51734611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 53966212 - 53966287
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  53966212 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 53966287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 15820731 - 15820659
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    |||||||| ||||||||||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  15820731 ctgttagcagccaacactcgggtgggatttagtcccacatcggatagataggattcttgagaagagtttataa 15820659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 10450773 - 10450698
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  10450773 tgttagcagccaacactcgggtgggatttagtcccacatcggatagataggtttcttgagaagagtttataaagag 10450698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 48511535 - 48511460
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  48511535 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 48511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 5321636 - 5321586
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  5321636 atttagtcccacatcggatagataggatttttgaaaagagtttataaagag 5321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 497
Target Start/End: Original strand, 9179114 - 9179187
Alignment:
Q  423 gttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||||  ||||||||||||||||||| || | |||||  || ||||||||||||||||    
T  9179114 gttagcggccaacactcggtggg-atttagtcccacatcggatagacatgattcatgagaagagtttataaagag 9179187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 419 - 497
Target Start/End: Complemental strand, 48837135 - 48837058
Alignment:
Q  419 acctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||| ||||||||| | || |||||| |||| ||||    
T  48837135 acctgttagctgccaacactcggtggg-atttagtcccacatcggatagataggattattgagaagagtatatatagag 48837058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 497
Target Start/End: Original strand, 9178893 - 9178961
Alignment:
Q  428 cggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||  ||||||||||| ||||||| |||||||||||  | ||||||||||||||||    
T  9178893 cggccaacactcggtgga-atttagtcccatatcggatagataggattcttaagaagagtttataaagag 9178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 10453826 - 10453753
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||| |||||  ||||||||||| ||||||| ||||||||||| || ||| ||||||||||||    
T  10453826 tgttagcagccaacacttggtgg--atttagtcccagatcggatagataggattcttgagaagggtttataaagag 10453753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 24453758 - 24453829
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    |||||||||||||||||||  ||  ||||||||||||||||||| |||||| |||| || |||||||||||||    
T  24453758 tgttagcggccaacactcgagggg-atttagtcccacatcggatagatagggttcttgagaagagtttataaa 24453829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 9180348 - 9180422
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||| | |  ||||||||||||||||||| ||||||||||| || || |||||||||||||    
T  9180348 tgttagcggccaaccctcgatcgg-atttagtcccacatcggatagataggattcttgagaaaagtttataaagag 9180422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 493
Target Start/End: Complemental strand, 10450549 - 10450478
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| |||||| |||| || ||||||||||||    
T  10450549 tgttagcagccaacactcgggtgggatttagtcccacatcggatagataggtttcttgagaagagtttataa 10450478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 11244666 - 11244591
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| | ||||||||||  |  ||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  11244666 tgttagcagtcaacactcgggtgggatttagtcccacatcggatagataggtttcttgagaagagtttataaagag 11244591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 22666418 - 22666368
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||| |||||| ||||||||||| || ||||||||||||||||    
T  22666418 atttagtcccacgtcggatagataggattcttgagaagagtttataaagag 22666368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 48511739 - 48511689
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  48511739 atttagtcccacatcggatagataggaatcttgagaagagtttataaagag 48511689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 54369043 - 54369093
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  54369043 atttagtcccacatcggatagataggactcttgagaagagtttataaagag 54369093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 2800073 - 2800013
Alignment:
Q  433 aacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaag 495  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||  | | ||||||||||||    
T  2800073 aacactcggtgg--atttagtcccacatcggatagataggattcttaagatgagtttataaag 2800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 496
Target Start/End: Complemental strand, 16061006 - 16060936
Alignment:
Q  425 tagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    |||||||||||||||| |||  |||||||||||||||||||  |||  ||||| || |||||||||||||||    
T  16061006 tagcggccaacactcgatggg-atttagtcccacatcggatatataatattcttgagaagagtttataaaga 16060936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 493
Target Start/End: Complemental strand, 42190601 - 42190530
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    |||||||||||||| |||||  |  ||||| ||||||||||||| ||||||| ||| || ||||||||||||    
T  42190601 tgttagcggccaactctcgggtgggatttaatcccacatcggatagataggaatcttgagaagagtttataa 42190530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 27219333 - 27219383
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  27219333 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 27219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 41380728 - 41380778
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  41380728 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 41380778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 43101471 - 43101421
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||| ||| ||||||| ||| || ||||||||||||||||    
T  43101471 atttagtcccacatcagatagataggactcttgagaagagtttataaagag 43101421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 44573330 - 44573380
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  44573330 atttagtcccacatcggatagatagtactcttgagaagagtttataaagag 44573380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 47833762 - 47833712
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||| ||||||||||||    
T  47833762 atttagtcccacatcggatagataggactcttgagaagtgtttataaagag 47833712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 16045491 - 16045423
Alignment:
Q  425 tagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    |||||||||||||||| |||  |||||||||||||||||||  |||  ||||| || |||||||||||||    
T  16045491 tagcggccaacactcgatggg-atttagtcccacatcggatatataatattcttgagaagagtttataaa 16045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 476
Target Start/End: Complemental strand, 10454009 - 10453956
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattc 476  Q
    |||||||| |||||||||| ||||  |||||||||||||||||||  |||||||||    
T  10454009 ctgttagcagccaacactcagtgg--atttagtcccacatcggataaataggattc 10453956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 39550102 - 39550028
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  39550102 tgttagcggccaacactcggtggg-atttagtcccacatcggatagataggattcttgagaagagtttataaagag 39550028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 34748757 - 34748832
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  34748757 tgttagcggccaacactcgggtgggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 34748832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 36092722 - 36092649
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||| || ||||||||||| ||||    
T  36092722 tgttagccgccaacactcggtg--tatttagtcccacatcggatagataggattcttgagaagagtttatagagag 36092649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 36270594 - 36270520
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||| || | ||||||||||||||    
T  36270594 tgttagcggtcaacactcggtggg-atttagtcccacatcggatagataggattcttgagacgagtttataaagag 36270520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 497
Target Start/End: Original strand, 36495643 - 36495720
Alignment:
Q  420 cctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||| |||||  |  ||||||||||||||||||| ||||||||||| || || |||||||||||||    
T  36495643 cctgttagcggccaactctcgggtggcatttagtcccacatcggatagataggattcttgagaatagtttataaagag 36495720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 33909116 - 33909191
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||| |||||||| |||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  33909116 tgttaacggccaactctcgggtgggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 33909191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 36495868 - 36495943
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||||||| || || |||||||||||||    
T  36495868 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggattcttgagaatagtttataaagag 36495943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 37756063 - 37755988
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  37756063 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 37755988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 37756289 - 37756214
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  37756289 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 37756214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 37762037 - 37761962
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  37762037 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 37761962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 44314429 - 44314354
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||  |  ||||||||||||||||||| |||  |||||| || ||||||||||||||||    
T  44314429 tgttagcggccaacactcgggtgggatttagtcccacatcggatagatgagattcttgagaagagtttataaagag 44314354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 43384380 - 43384330
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  43384380 atttagtcccacatcggatagataggattcttgagaagagtttataaagag 43384330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 27585235 - 27585307
Alignment:
Q  422 tgttagcggccaacactc-ggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    ||||||| |||||||||| |||||  ||||||||||||||||||| ||||||||||| || |||||||||||||    
T  27585235 tgttagcagccaacactcaggtggg-atttagtcccacatcggatagataggattcttgagaagagtttataaa 27585307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 498
Target Start/End: Original strand, 19843687 - 19843762
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagaga 498  Q
    |||||||||||||||||||  ||  ||||||||||| ||| ||| ||||||||||| || |||||||||||||||||    
T  19843687 tgttagcggccaacactcgaaggg-atttagtcccaaatcagatagataggattcttgagaagagtttataaagaga 19843762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 497
Target Start/End: Complemental strand, 36270823 - 36270747
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||||  |  |||| ||||||||| |||| ||||||||||| || | ||||||||||||||    
T  36270823 ctgttagcggccaacactcgggtgggattttgtcccacattggatagataggattcttgacaggagtttataaagag 36270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 497
Target Start/End: Complemental strand, 37531052 - 37530973
Alignment:
Q  420 cctgttagcggccaacactcggtggtt--atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| ||||||||||  ||| |  |||||||||||| |||||| ||||||||||| || ||||||||||||||||    
T  37531052 cctgttagcagccaacactcactgggtggatttagtcccacgtcggatagataggattcttgagaagagtttataaagag 37530973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 20296243 - 20296317
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||  |||||||||||||| |||| || |||||||| || ||||||||||||||||    
T  20296243 tgttagcggccaacactcgagggg-atttagtcccacattggatagagaggattcttgagaagagtttataaagag 20296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 22206402 - 22206328
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||| | ||||||||||  |||||||||||||||| || ||||||||||| || || |||||||||||||    
T  22206402 tgttagcggcaatcactcggtggg-atttagtcccacatcgaatagataggattcttgagaaaagtttataaagag 22206328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 22228337 - 22228411
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||| | ||||||||||  |||||||||||||||| || ||||||||||| || || |||||||||||||    
T  22228337 tgttagcggcaatcactcggtggg-atttagtcccacatcgaatagataggattcttgagaaaagtttataaagag 22228411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 22686857 - 22686783
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| |||||||||  ||  ||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  22686857 tgttagcggtcaacactcgagggg-atttaatcccacatcggataaataggattcttgaaaagagtttataaagag 22686783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 47346219 - 47346144
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||| ||| ||||||| ||| || ||||||||||||||||    
T  47346219 tgttagcggccaactctcgggtgggatttagtcccacatcagatagataggaatcttgagaagagtttataaagag 47346144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 47346448 - 47346373
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  47346448 tgttagcggccaactctcgggtgggatttagtcccacatcggaaagataggaatcttgagaagagtttataaagag 47346373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 497
Target Start/End: Complemental strand, 43384045 - 43383996
Alignment:
Q  448 tttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||| ||||||| ||| | |||||||||||||||||    
T  43384045 tttagtcccacatcggatagataggagtcttgcaaagagtttataaagag 43383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 257367 - 257317
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||  ||||| || ||||||||||||||||    
T  257367 atttagtcccacatcggatagatattattcttgagaagagtttataaagag 257317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 7135343 - 7135293
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||| |||||||||| ||||||| ||| || ||||||||||||||||    
T  7135343 atttagtcacacatcggatagataggactcttgagaagagtttataaagag 7135293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 496
Target Start/End: Complemental strand, 34915045 - 34914971
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    ||||||| |||| |||||||  |  ||||||||||||||||||| || |||||||| || ||||||||| |||||    
T  34915045 tgttagcagccagcactcgggtgggatttagtcccacatcggatagacaggattcttgagaagagtttacaaaga 34914971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 37272145 - 37272095
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||| | ||||||| ||| || ||||||||||||||||    
T  37272145 atttagtcccacatcggttagataggactcttgataagagtttataaagag 37272095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 27729598 - 27729554
Alignment:
Q  426 agcggccaacactcggtggttatttagtcccacatcggattgatag 471  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||    
T  27729598 agcggccaacactcggtggg-atttagtcccacatcggatagatag 27729554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 497
Target Start/End: Complemental strand, 40122038 - 40121989
Alignment:
Q  448 tttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  40122038 tttagtcccacatcggatagatagtactcttgagaagagtttataaagag 40121989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 36092515 - 36092442
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||  ||||||||| ||||  |||||||||||||| |||| |||| |||||| || ||||||||||| ||||    
T  36092515 tgttagcaaccaacactcagtgg--atttagtcccacattggatagatatgattcttgagaagagtttatagagag 36092442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 6e-20; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 422 - 496
Target Start/End: Original strand, 45443200 - 45443273
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  45443200 tgttagcggccaacactcggtggg-atttagtcccacatcggatagataggattcttgagaagagtttataaaga 45443273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 12287827 - 12287902
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  12287827 ctgttagtggccaacactcggtggg-atttagtcccacatcggatagataggattcttgaaaagaggttataaagag 12287902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 17294957 - 17295032
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  17294957 tgttagcggccaacactcgggtgggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 17295032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 18585017 - 18585092
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| || |||| |||||||||||    
T  18585017 ctgttagcagccaacactcggtggg-atttagtcccacatcggatagataggattcttgagaagattttataaagag 18585092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 33562252 - 33562177
Alignment:
Q  422 tgttagcggccaacactcgg-tggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  33562252 tgttagcggccaacactcgggtgggt-tttagtcccacatcggatagataggattcttgaaaagaggttataaagag 33562177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 40521617 - 40521543
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||| ||||||||||||||||||| |||| |||||| || ||||||||||||||||    
T  40521617 tgttagcggccaacactcga-ggtgatttagtcccacatcggatagataagattcttgagaagagtttataaagag 40521543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 45858635 - 45858709
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||  |||  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  45858635 tgttagcggccaacactca-tggggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 45858709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 430 - 497
Target Start/End: Complemental strand, 28509506 - 28509437
Alignment:
Q  430 gccaacactcggtggtt--atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  28509506 gccaacactcggtgggtggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 28509437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 494
Target Start/End: Complemental strand, 31411685 - 31411613
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    |||||| |||||||||||||  |  ||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  31411685 tgttagtggccaacactcgggtgggatttagtcccacatcagatagataggattcttgaaaagagtttataaa 31411613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 29228654 - 29228729
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  29228654 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 29228729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 493
Target Start/End: Original strand, 51722232 - 51722303
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  51722232 tgttagcagccaacactcgggtgggatttagtcccacatcggatagataggattcttgagaagagtttataa 51722303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 431 - 492
Target Start/End: Complemental strand, 20208196 - 20208137
Alignment:
Q  431 ccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttata 492  Q
    ||||||||||||||  ||||||||||||||||||| |||| |||||| ||||||||||||||    
T  20208196 ccaacactcggtgg--atttagtcccacatcggatagatatgattcttgaaaagagtttata 20208137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 431 - 492
Target Start/End: Complemental strand, 20208495 - 20208436
Alignment:
Q  431 ccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttata 492  Q
    ||||||||||||||  ||||||||||||||||||| |||| |||||| ||||||||||||||    
T  20208495 ccaacactcggtgg--atttagtcccacatcggatagatatgattcttgaaaagagtttata 20208436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 40642876 - 40642826
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  40642876 atttagtcccacatcggatagataggattcttgagaagagtttataaagag 40642826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 4187639 - 4187567
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    ||||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||    
T  4187639 ctgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataa 4187567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 29228426 - 29228502
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||| |||||  |  |||||| |||||||||||| ||||||| ||| || ||||||||||||||||    
T  29228426 ctgttagcggccaactctcgggtgggatttagacccacatcggatagataggaatcttgagaagagtttataaagag 29228502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 477
Target Start/End: Original strand, 17294846 - 17294901
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattct 477  Q
    ||||||||||||||||||||  |  ||||||||||||||||||| |||||||||||    
T  17294846 tgttagcggccaacactcgggtgggatttagtcccacatcggatagataggattct 17294901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 29383747 - 29383675
Alignment:
Q  422 tgttagcggccaacactcgg-tggttatttagtcccacatcggattgataggattctcgaaaagagtttataaag 495  Q
    |||||||||||||||||||| |||  ||||||||||||||||||| |||| ||| || || ||||||||||||||    
T  29383747 tgttagcggccaacactcgggtgg--atttagtcccacatcggatagataagatacttgagaagagtttataaag 29383675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 2697431 - 2697381
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  2697431 atttagtcccacatcggatagataggactcttgagaagagtttataaagag 2697381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 4022225 - 4022175
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  4022225 atttagtcccacatcggatagataggactcttgagaagagtttataaagag 4022175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 19937143 - 19937093
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| ||||| || ||||||||||||||||    
T  19937143 atttagtcccacatcggatagatagaattcttgagaagagtttataaagag 19937093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 38474287 - 38474337
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  38474287 atttagtcctacatcggatagataggattcttgacaagagtttataaagag 38474337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 493
Target Start/End: Complemental strand, 4187407 - 4187336
Alignment:
Q  422 tgttagcggccaacactcg-gtggttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||| ||||||| ||| || ||||||||||||    
T  4187407 tgttagcggccaactctcgagtggg-atttagtcccacatcggatagataggaatcttgagaagagtttataa 4187336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 30604585 - 30604510
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| |||| |||||  |  ||||||||||||||||||| ||||||| ||| || || |||||||||||||    
T  30604585 tgttagcggtcaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaatagtttataaagag 30604510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 17419791 - 17419841
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  17419791 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 17419841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 497
Target Start/End: Complemental strand, 27958170 - 27958097
Alignment:
Q  423 gttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||| |||||||||||| ||  |||||||||| |||  ||| ||||||||||| || ||||||||||||||||    
T  27958170 gttagcagccaacactcggaggg-atttagtcccgcattagatagataggattcttgagaagagtttataaagag 27958097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 496
Target Start/End: Complemental strand, 8520193 - 8520144
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    ||||||||||||||||||| ||||| | ||| || |||||||||||||||    
T  8520193 atttagtcccacatcggatagatagcactcttgagaagagtttataaaga 8520144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 31411483 - 31411423
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaa 482  Q
    |||||||| |||||||||||  |  |||||||| |||||||||| ||||||||||| ||||    
T  31411483 tgttagcgaccaacactcgggtgggatttagtctcacatcggatagataggattcttgaaa 31411423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 9e-19; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 421 - 497
Target Start/End: Complemental strand, 4506165 - 4506090
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  4506165 ctgttagctgccaacactcggtggg-atttagtcccacatcggatagataggattcttgagaagagtttataaagag 4506090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 10862182 - 10862108
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  10862182 tgttagcggccaacactcgagggg-atttagtcccacatcggatagataggattcttgagaagagtttataaagag 10862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 498
Target Start/End: Original strand, 32197182 - 32197257
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagaga 498  Q
    ||||||||||||||||||| |||  |||||||||||||||  ||  |||||||||||||||||| ||||||||||||    
T  32197182 tgttagcggccaacactcgatggg-atttagtcccacatcttatatataggattctcgaaaagaatttataaagaga 32197257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 11349918 - 11349843
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  11349918 tgttagcagccaacactcgggtgggatttagtcccacatcggatagataggtttcttgagaagagtttataaagag 11349843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 32811001 - 32810926
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||  |  |||||||||| |||||||| ||||||||||| || ||||||||||||||||    
T  32811001 tgttagcagccaacactcgggtgggatttagtcccgcatcggatagataggattcttgataagagtttataaagag 32810926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 33532860 - 33532786
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||| ||||||||||||  ||  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  33532860 tgttagtggccaacactcgagggg-atttagtcccacatcggatagataggattcttgagaagagtttataaagag 33532786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 39420675 - 39420751
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||| |||||  |  ||||||||||||||||||| ||||||| | | || ||||||||||||||||    
T  39420675 ctgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaattttgagaagagtttataaagag 39420751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 4342382 - 4342308
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| ||||| ||||| ||  |||||| ||||||||    
T  4342382 tgttagcggccaacactcagtggg-atttagtcccacatcggatagatagaattcttgaggagagttaataaagag 4342308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 11350312 - 11350237
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||  |  ||||||||||| ||||||| |||||| |||| || ||||||||||||||||    
T  11350312 tgttagcagccaacactcgggtgggatttagtcccatatcggatagataggtttcttgagaagagtttataaagag 11350237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 15962282 - 15962207
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || || |||||||||||||    
T  15962282 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaatagtttataaagag 15962207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 28193699 - 28193625
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||  ||||||||||||||| ||| ||||||||||| || |||| |||||||||||    
T  28193699 tgttagcggccaacactcgagggg-atttagtcccacatcagatagataggattcttgagaagattttataaagag 28193625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 497
Target Start/End: Original strand, 936792 - 936866
Alignment:
Q  423 gttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||| |||||  |  |||||||| |||||||||| ||||||| ||| || ||||||||||||||||    
T  936792 gttagcggccaactctcgggtgggatttagtctcacatcggatagataggaatcttgagaagagtttataaagag 936866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 18901964 - 18901914
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| |||| || ||| |||||||||||||||||||    
T  18901964 atttagtcccacatcggatagataagactcttgaaaagagtttataaagag 18901914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 14280259 - 14280334
Alignment:
Q  422 tgttagcggccaacactc-ggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| |||||||||| |||||  |||||||||||||| |||| ||||||||||  || ||||||||||||||||    
T  14280259 tgttagcagccaacactcaggtggg-atttagtcccacattggatagataggattcatgagaagagtttataaagag 14280334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 494
Target Start/End: Complemental strand, 28193459 - 28193388
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    ||||| |||||||||||||  ||  |||||||| |||||||||| ||||||||||| || |||||||||||||    
T  28193459 tgttatcggccaacactcgagggg-atttagtctcacatcggatagataggattcttgagaagagtttataaa 28193388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 10861958 - 10861884
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||  ||||||||||| || ||||  |||||||||| || ||||||||||||||||    
T  10861958 tgttagcggccaacactcgagggg-atttagtcccatattggatatataggattcttgagaagagtttataaagag 10861884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 10862286 - 10862360
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||  ||||||||||||||||||| |||| |||| |  | ||||||||||||||||    
T  10862286 tgttagcggccaacactcgagggg-atttagtcccacatcggatagataagattttttagaagagtttataaagag 10862360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 3976571 - 3976521
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||  ||||| || ||||||||||||||||    
T  3976571 atttagtcccacatcggatagataatattcttgagaagagtttataaagag 3976521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 3977103 - 3977053
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  3977103 atttagtcccacatcggatagatagtactcttgagaagagtttataaagag 3977053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 7877848 - 7877898
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| ||||||||| ||||| | |||||| ||||||||||||||||    
T  7877848 atttagtcctacatcggatagatagcactctcgagaagagtttataaagag 7877898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 43169246 - 43169296
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  43169246 atttagtcccacatcggatagatagtactcttgagaagagtttataaagag 43169296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 496
Target Start/End: Complemental strand, 30166179 - 30166130
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    ||||||||||||||||||| ||||| | ||| || |||||||||||||||    
T  30166179 atttagtcccacatcggatagatagcactcttgagaagagtttataaaga 30166130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 15711476 - 15711550
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  15711476 tgttagcagccaacactcggtggg-atttagtcccacatcggatagataggattcttgagaagagtttataaagag 15711550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 38287861 - 38287787
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  38287861 tgttaggggccaacactcggtggg-atttagtcccacatcggatagataggattcttgataagagtttataaagag 38287787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 498
Target Start/End: Original strand, 35908657 - 35908733
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagaga 498  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | |||||||| || || |||||||||||||||||    
T  35908657 ctgttagcggccaacactcggtggg-atttagtcccacatcgggtagataggatacttgagaagagtttataaagaga 35908733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 498
Target Start/End: Original strand, 18464049 - 18464125
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagaga 498  Q
    ||||||||||||||||||||  |  ||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  18464049 tgttagcggccaacactcgggtgggatttagtcccacatcagatagataggattcttgagaagagtttataaagaga 18464125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 39587981 - 39587908
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| |||||||||| ||||  ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  39587981 tgttagcagccaacactcagtgg--atttagtcccacatcagatggataggattctagagaagagtttataaagag 39587908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 9596117 - 9596043
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||| || || | |||||||||||    
T  9596117 tgttagcggccaacactcggtggg-atttagttccacatcggatagataggattcttgagaatattttataaagag 9596043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 14019787 - 14019862
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  14019787 tgttagcagccaacactcgggtgggatttagtcccacatcggatagataggtttcttgagaagagtttataaagag 14019862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 20232522 - 20232447
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||  |  ||||||||||||||||||| |||  |||||| || ||||||||||||||||    
T  20232522 tgttagcggccaacactcgggtgggatttagtcccacatcggatagatgagattcttgagaagagtttataaagag 20232447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 17607338 - 17607264
Alignment:
Q  422 tgttagcggccaacactcg-gtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||  |||||||| |||||||||| ||||||||||| |  ||||||||||||||||    
T  17607338 tgttagcggccaacactcgagtgg--atttagtctcacatcggatagataggattcttgtgaagagtttataaagag 17607264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 498
Target Start/End: Complemental strand, 9596343 - 9596268
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagaga 498  Q
    |||||| ||||||||||||||||  |||||||| || ||||||| |||| |||||| || |||||||||||||||||    
T  9596343 tgttagtggccaacactcggtggg-atttagtctcatatcggatagataagattcttgagaagagtttataaagaga 9596268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 8276553 - 8276603
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||| ||||||||||| || ||||||||||||||||    
T  8276553 atttagtcccacattggatagataggattcttgagaagagtttataaagag 8276603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 8605470 - 8605544
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||||   |||||||| ||| ||||||  |||||||||| || ||||||||||| ||||    
T  8605470 tgttagcggccaacactcggtgac-atttagtctcacgtcggataaataggattcttgagaagagtttatatagag 8605544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 18905860 - 18905910
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  18905860 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 18905910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 21085248 - 21085198
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  21085248 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 21085198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 32931405 - 32931455
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||  ||||| || ||||||||||||||||    
T  32931405 atttagtcccacatcggatagatatcattcttgagaagagtttataaagag 32931455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 34248081 - 34248131
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||| | ||||||| ||| || ||||||||||||||||    
T  34248081 atttagtcccacatcggttagataggactcttgataagagtttataaagag 34248131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 497
Target Start/End: Original strand, 35561674 - 35561720
Alignment:
Q  451 agtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||| |||| |||||| || ||||||||||||||||    
T  35561674 agtcccacatcggatagataagattcttgagaagagtttataaagag 35561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 33396285 - 33396361
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||| ||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  33396285 ctgttagcggccaacactagggtgggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 33396361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 26842699 - 26842774
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  26842699 tgttagcagccaacactcgggtgggatttagtcccacatcggatagataggtttcttgagaagagtttataaagag 26842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 498
Target Start/End: Original strand, 25183981 - 25184058
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagaga 498  Q
    |||||||| ||||||||||||  |  |||||||||| |||||||| |||| |||||| || |||||||||||||||||    
T  25183981 ctgttagcagccaacactcgggtgggatttagtcccgcatcggatagataagattcttgataagagtttataaagaga 25184058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 33396505 - 33396579
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||  |  ||||||||| ||||||||| ||||||||| | || ||||||||||||||||    
T  33396505 tgttagcggccaacactcgggtgggatttagtcc-acatcggatagataggatttttgagaagagtttataaagag 33396579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 25184214 - 25184264
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||| |||||||| ||||||||||| || ||||||||||||||||    
T  25184214 atttagtcccgcatcggatagataggattcttgataagagtttataaagag 25184264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 8144021 - 8144071
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  8144021 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 8144071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 21067157 - 21067107
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||| ||||||| ||||| ||||| || ||||||||||||||||    
T  21067157 atttagtcccatatcggatagatagcattcttgagaagagtttataaagag 21067107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 21088948 - 21088898
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||| ||||||| ||||| ||||| || ||||||||||||||||    
T  21088948 atttagtcccatatcggatagatagcattcttgagaagagtttataaagag 21088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 26339942 - 26339892
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| |||| || ||| || ||||||||||||||||    
T  26339942 atttagtcccacatcggatagataagaatcttgagaagagtttataaagag 26339892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 496
Target Start/End: Complemental strand, 24055209 - 24055160
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    ||||||||||||||||||| ||||| | ||| || |||||||||||||||    
T  24055209 atttagtcccacatcggatagatagcactcttgagaagagtttataaaga 24055160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 497
Target Start/End: Complemental strand, 1744940 - 1744892
Alignment:
Q  449 ttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||| |||| ||||| | ||| |||||||||||||||||||    
T  1744940 ttagtcccacattggatagatagtactcttgaaaagagtttataaagag 1744892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 497
Target Start/End: Complemental strand, 12134581 - 12134533
Alignment:
Q  449 ttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  12134581 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 12134533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 497
Target Start/End: Complemental strand, 27443635 - 27443587
Alignment:
Q  449 ttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||| ||||||| ||| ||||||||||| || ||||||||||||||||    
T  27443635 ttagtaccacatcagatagataggattcttgagaagagtttataaagag 27443587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 495
Target Start/End: Original strand, 30539239 - 30539287
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaag 495  Q
    ||||||||||||||||||| |||| || ||| || ||||||||||||||    
T  30539239 atttagtcccacatcggatagataagactcttgataagagtttataaag 30539287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 33912022 - 33912097
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | |||||||| || || ||||||||||||||||    
T  33912022 ctgttagcggccaacactcggtggg-atttagtcccacatcgggtagataggatacttgagaagagtttataaagag 33912097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 4026053 - 4026124
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||| ||||||||||| || |||||||||||||    
T  4026053 tgttggcggccaacactcagtggg-atttagtcccacatcggatagataggattcttgagaagagtttataaa 4026124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 497
Target Start/End: Complemental strand, 37097856 - 37097781
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| ||||||||||||||  ||||||||||||||| ||| ||||||||||| || |||| |||||||||||    
T  37097856 ctgttagcgaccaacactcggtggg-atttagtcccacatcagatagataggattcttgagaagattttataaagag 37097781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 11290148 - 11290223
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  11290148 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 11290223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 46529047 - 46528973
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| |||||||||||||||  |||||||| |||||||||| ||| ||||||| || ||||||||||||||||    
T  46529047 tgttagcagccaacactcggtggg-atttagtctcacatcggatagattggattcttgagaagagtttataaagag 46528973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 37288994 - 37288922
Alignment:
Q  421 ctgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    |||||||| ||||||| |||||||  ||||||||||||||||||| |||| |||||| || |||||||||||||    
T  37288994 ctgttagctgccaacaatcggtggg-atttagtcccacatcggatagatatgattcttgagaagagtttataaa 37288922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 26941841 - 26941915
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||||||  |||||||||||||||| || ||||| || || || ||||||||||| ||||    
T  26941841 tgttagcggccaacactcggtgg-gatttagtcccacatcgaatagatagtatccttgagaagagtttatatagag 26941915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 50868138 - 50868063
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||| ||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  50868138 tgttagcgaccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 50868063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 52810749 - 52810675
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||  |||  ||||||||| ||||||||| |||| |||||| || ||||||||||||||||    
T  52810749 tgttagcggccaacactcaatgga-atttagtcctacatcggatagataagattcttgagaagagtttataaagag 52810675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 52810976 - 52810902
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||||||  ||||||||||||||||||| || | |||||| || ||||||| | ||||||    
T  52810976 tgttagcggccaacactcggtggg-atttagtcccacatcggatagaaaagattcttgagaagagttcaaaaagag 52810902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 51469485 - 51469535
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  51469485 atttagtcccacatcggatagataggactcttgagaagagtttataaagag 51469535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 2016512 - 2016586
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||| ||||||||||||  ||  |||||||| |||||| ||| ||||||||||| || ||||||||||||||||    
T  2016512 tgttagtggccaacactcgagggg-atttagtctcacatcagatagataggattcttgagaagagtttataaagag 2016586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 15665157 - 15665207
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||| ||||    
T  15665157 atttagtcccacatcggatagataggactcttgagaagagtttatatagag 15665207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 22867088 - 22867138
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||| |||||| ||||||| ||| || ||||||||||||||||    
T  22867088 atttagtcccacgtcggatagataggactcttgagaagagtttataaagag 22867138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 29669463 - 29669413
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  29669463 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 29669413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 491
Target Start/End: Complemental strand, 43798242 - 43798183
Alignment:
Q  430 gccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttat 491  Q
    |||||||||| ||||  |||||||||||||||||||  |||||||||| || ||||||||||    
T  43798242 gccaacactcagtgg--atttagtcccacatcggatatataggattcttgagaagagtttat 43798183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 47845769 - 47845839
Alignment:
Q  424 ttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaa 494  Q
    ||||| ||||||||||||  |  |||||||||||| |||||| |||||| |||| || |||||||||||||    
T  47845769 ttagcagccaacactcgggtgggatttagtcccacgtcggatagataggtttcttgagaagagtttataaa 47845839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 48843117 - 48843067
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||| |||| ||| ||||||| ||| |||||||||||||||||||    
T  48843117 atttagtcccgcatcagatagataggactcttgaaaagagtttataaagag 48843067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 493
Target Start/End: Original strand, 51470487 - 51470533
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||    
T  51470487 atttagtcccacatcggatagataggactcttgagaagagtttataa 51470533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 53740186 - 53740236
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  53740186 atttagtcccacatcggatagatagtactcttgagaagagtttataaagag 53740236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 22196677 - 22196603
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||| || ||| || ||||||||||||||||    
T  22196677 tgttagcggccaacactcggtggg-atttagtcccacatcggatagatatgactcttgagaagagtttataaagag 22196603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 30329815 - 30329890
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  30329815 tgttagcggccaactctcgggagggatttagtcccacatcggatagataggattcttgagaagagtttataaagag 30329890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 497
Target Start/End: Complemental strand, 22196448 - 22196376
Alignment:
Q  424 ttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  22196448 ttagcggccaacactcggtggg-atttagtcccacatcggatagatagtactcttgagaagagtttataaagag 22196376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 496
Target Start/End: Complemental strand, 14769956 - 14769883
Alignment:
Q  422 tgttagcggccaacactcg-gtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    ||||||||||||||||||| ||||  |||||||| |||||||||| ||||||||||| || |||||||||||||||    
T  14769956 tgttagcggccaacactcgagtgg--atttagtctcacatcggatagataggattcttgagaagagtttataaaga 14769883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 83935 - 83860
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||  |  |||||||||||||||||||  |||||||||| || || |||||||||||||    
T  83935 tgttagcggccaacactcgggtgggatttagtcccacatcggatatataggattcttgagaaaagtttataaagag 83860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 84159 - 84084
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||| |||||||||||||  |  |||||||||||||||||||  |||||||||| || ||||||||||||||||    
T  84159 tgttagtggccaacactcgggtgggatttagtcccacatcggatatataggattcttgagaagagtttataaagag 84084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 32395439 - 32395364
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  32395439 tgttagcggccaactctcgggtgggatttagtcccacatcggatagataggaatcttgagaagagtttataaagag 32395364  T

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Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 489
Target Start/End: Original strand, 33040264 - 33040331
Alignment:
Q  422 tgttagcggccaacactcg-gtggttatttagtcccacatcggattgataggattctcgaaaagagttt 489  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||| || ||||||||    
T  33040264 tgttagcggccaacactcgcgtggg-atttagtcccacatcggatagataggattcttgagaagagttt 33040331  T

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Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 19439840 - 19439914
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||  ||||||||||||||| ||| ||||||||||| || |||| |||||||||||    
T  19439840 tgttagcggccaacactcgagggg-atttagtcccacatcagatagataggattcttgagaagaatttataaagag 19439914  T

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Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 491
Target Start/End: Original strand, 33040449 - 33040518
Alignment:
Q  422 tgttagcggccaacactcg-gtggttatttagtcccacatcggattgataggattctcgaaaagagtttat 491  Q
    ||||||||||||||||||| ||||  ||||||||||||||| ||| ||||||||||| || ||||||||||    
T  33040449 tgttagcggccaacactcgcgtggg-atttagtcccacatcagatagataggattcttgagaagagtttat 33040518  T

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Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 38131768 - 38131818
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  38131768 atttagtcccacatcggatagataggactcttgagaagagtttataaagag 38131818  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 497
Target Start/End: Complemental strand, 39668532 - 39668467
Alignment:
Q  430 gccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||| ||||  ||||||||||||||||||| |||| |||||| || |||| |||||||||||    
T  39668532 gccaacactcagtgg--atttagtcccacatcggatagatatgattcttgagaagaatttataaagag 39668467  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 2471817 - 2471743
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||| |||||||||||  ||  ||||||||||||||||||| |||||| || | || ||||||||||||||||    
T  2471817 tgttagcagccaacactcgagggg-atttagtcccacatcggatagatagggtttttgagaagagtttataaagag 2471743  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 5096021 - 5095946
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||| ||||||||||  |  ||||| ||||||||||||| ||||||||| |  | ||||||||||||||||    
T  5096021 tgttagcggtcaacactcgggtgggatttactcccacatcggatagataggattttttagaagagtttataaagag 5095946  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 477
Target Start/End: Original strand, 18541930 - 18541984
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattct 477  Q
    ||||||||||||||||| |||||  |||||||| |||||||||| |||||||||||    
T  18541930 tgttagcggccaacacttggtggg-atttagtctcacatcggatagataggattct 18541984  T

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Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 29396468 - 29396393
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||| |||||  |  ||||||||||||||| ||| ||||||| ||| || || |||||||||||||    
T  29396468 tgttagcggccaactctcgggtgggatttagtcccacatcagatagataggaatcttgagaaaagtttataaagag 29396393  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 873796 - 873746
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||| ||||    
T  873796 atttagtcccacatcggatagataggactcttgagaagagtttatagagag 873746  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 1028193 - 1028143
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  1028193 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 1028143  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 37995734 - 37995684
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| | ||| || ||||||||||||||||    
T  37995734 atttagtcccacatcggatagatagcactcttgagaagagtttataaagag 37995684  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 496
Target Start/End: Original strand, 27760079 - 27760128
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaaga 496  Q
    ||||||||||||||||||| ||||||| ||| || |||||||| ||||||    
T  27760079 atttagtcccacatcggatagataggactcttgagaagagtttctaaaga 27760128  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 498
Target Start/End: Original strand, 9850449 - 9850528
Alignment:
Q  422 tgttagcggccaacactcgg-tggtt--atttagtcccacatcggattgataggattctcgaaaagagtttataaagaga 498  Q
    ||||||| |||||||||||| ||| |  ||||| |||||||| |||| ||||||||||| || ||||||||||| |||||    
T  9850449 tgttagcagccaacactcgggtgggtggatttattcccacattggatagataggattcttgataagagtttatatagaga 9850528  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 18541703 - 18541776
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||||| |  ||||||||  | ||||||| |||| |||||| || || |||||||||||||    
T  18541703 tgttagcggccaacactcggtag--atttagtctaagatcggatagataagattcttgagaatagtttataaagag 18541776  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 493
Target Start/End: Complemental strand, 24792392 - 24792320
Alignment:
Q  422 tgttagcggccaacactcggtg-gttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    |||||||||||||| ||||| | |  ||||||||||| ||||||| ||||||| ||| || ||||||||||||    
T  24792392 tgttagcggccaactctcggggtgagatttagtcccatatcggatagataggaatcttgagaagagtttataa 24792320  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 165764 - 165838
Alignment:
Q  422 tgttagcggccaacactcggtggttatttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    |||||||||||||||||||  ||  ||||||||| ||||||||| ||||| ||||| || ||||||||||||||||    
T  165764 tgttagcggccaacactcgagggg-atttagtcctacatcggatagatagaattcttgagaagagtttataaagag 165838  T

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Target: scaffold0785 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 3220 - 3170
Alignment:
Q  447 atttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  3220 atttagtcccacatcggatagatagaatttttgagaagagtttataaagag 3170  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 493
Target Start/End: Complemental strand, 34775 - 34703
Alignment:
Q  422 tgttagcggccaacactcggtg-gttatttagtcccacatcggattgataggattctcgaaaagagtttataa 493  Q
    |||||||||||||| ||||| | |  ||||||||||| ||||||| ||||||| ||| || ||||||||||||    
T  34775 tgttagcggccaactctcggggtgagatttagtcccatatcggatagataggaatcttgagaagagtttataa 34703  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 43726 - 43774
Alignment:
Q  449 ttagtcccacatcggattgataggattctcgaaaagagtttataaagag 497  Q
    ||||| ||||||| ||| ||||||||||| || ||||||||||||||||    
T  43726 ttagtaccacatcagatagataggattcttgagaagagtttataaagag 43774  T

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