View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8268_low_3 (Length: 306)
Name: NF8268_low_3
Description: NF8268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8268_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 36 - 290
Target Start/End: Original strand, 38919346 - 38919600
Alignment:
| Q |
36 |
tactagaaaattgatttttccaaaacctatttttgattcttctaagcttttcccgcccaaaaatatttcgggatttgaccctagaagtggtatcgccaaa |
135 |
Q |
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| T |
38919346 |
tactagaaaattgatttttccaaaacctatttttgattcttctaagcttttcccgcccaaaaatatttcgggatttgaccctagaagtggtatcgccaaa |
38919445 |
T |
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| Q |
136 |
gaaaatatagtttgcaaaatttttgtttttaatgctgacgtggttgaaaatctaagagcaaaatatattaattttaatcctacacgcgttgaggctttat |
235 |
Q |
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| T |
38919446 |
gaaaatatagtttgcaaaatttttgtttttaatgctgacgtggttgaaaatctaagagcaaaatatattaattttaatcctacacgcgttgaggctttat |
38919545 |
T |
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| Q |
236 |
cggcttttatttggagtcgttatgttgatgttatttataatgatggtgtgcaaag |
290 |
Q |
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| T |
38919546 |
cggcttttatttggagtcgttatgttgatgttatttataatgatggtgtgcaaag |
38919600 |
T |
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