View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8268_low_6 (Length: 235)
Name: NF8268_low_6
Description: NF8268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8268_low_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 39062810 - 39062578
Alignment:
| Q |
1 |
agcaaaggttgtgtgtgaaacatttatatggcaattgatgagataaatatcctagaatagagagcttaaggaagttttatggatggttgctagggtccca |
100 |
Q |
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| T |
39062810 |
agcaaaggttgtgtgtgaaacatttatatggcaattgatgagataaatatcctagaatagag--cttaaggaagttttatgggtggttgctagggtccca |
39062713 |
T |
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| Q |
101 |
tggaaagaacaatgcaatgaaagcactcaattagaagactaggaaaatatgaaggatgtacctcctgtatagctctcatttcaagacagatactcaattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39062712 |
tggaaagaacaatgcaatgaaagcactcaattagaagactagaaaaatatgaaggatgtacctcctgtatagctctcatttcaagacagatactcaattg |
39062613 |
T |
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| Q |
201 |
cgacctacaagtgaaaagcatgtgtgaggtctttc |
235 |
Q |
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||||||||||||||| | |||| ||||||||||| |
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| T |
39062612 |
cgacctacaagtgaacaatatgtttgaggtctttc |
39062578 |
T |
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