View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8269_low_16 (Length: 241)
Name: NF8269_low_16
Description: NF8269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8269_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 20 - 220
Target Start/End: Original strand, 47117439 - 47117639
Alignment:
| Q |
20 |
tgttgcattctattagacagttaagagtactcaagaacaacctccaccaatgagacctcgttcacctatggtaagcttcatgcgagttgaatttactact |
119 |
Q |
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| T |
47117439 |
tgttgcattctattagacagttaagagtactcaagaacaacctccaccaatgagacctcgttcacctatggtaagcttcatgcgagttgaatttactact |
47117538 |
T |
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| Q |
120 |
aatcacattattttgaaaattagtatgaaattttgaaacatctaatttttgtgttgtttctatcagtcaattcgctccactcaggaacaacctctatctg |
219 |
Q |
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| T |
47117539 |
aatcacattattttgaaaattagtatgaaattttgaaacatctaatttttgtgttgtttctattagtcaattcgctctactcaggaacaacctctatctg |
47117638 |
T |
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| Q |
220 |
c |
220 |
Q |
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| T |
47117639 |
c |
47117639 |
T |
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