View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8272_high_7 (Length: 277)
Name: NF8272_high_7
Description: NF8272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8272_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 42227134 - 42226898
Alignment:
| Q |
23 |
atatttttctgtcaaatgatttgcattgatgatttctaccattagcttcctccctgaaccttccgccatatagtatctacataaattaattaacatgagt |
122 |
Q |
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| T |
42227134 |
atatttttctgtcaaatgatttgcattgatgatttctaccattagcttcctccctgaaccttccgccatatagtatctacataaattaattaacatgagt |
42227035 |
T |
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| Q |
123 |
ttatagtttcgatcaaaacaaagattttgtgttaagatttcgccacctttgataaatttgtcaggttatgtctcttgatccttgactgatgtgtatggac |
222 |
Q |
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| T |
42227034 |
ttatagtttcgatcaaaacaaagattttgtgttaagatttcgccacctttgataaatttgtcaggttatgtctcttgatccttgactgatgtgtatggac |
42226935 |
T |
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| Q |
223 |
aaatatttgttcgaatacctctcgttatatgcgtgtgt |
260 |
Q |
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| T |
42226934 |
aaatatttgttcgaatacctct-gttatatgcgtgtgt |
42226898 |
T |
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