View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8274_high_12 (Length: 222)
Name: NF8274_high_12
Description: NF8274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8274_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 12433994 - 12433810
Alignment:
| Q |
23 |
tggaacataaccgagtctcaactaagacgtatacctacaattcctttcatttgaactggctttgaacatgcaggactgcctgtaactacctgaaatgtaa |
122 |
Q |
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| T |
12433994 |
tggaacataaccgagtctcaactaagacgtatacctacaattcctttcatttgaactggctttgaacatgcaggactgcctgtaactacctgaaatgtaa |
12433895 |
T |
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| Q |
123 |
cctgtgtgtagacatgttaagatttacttgtaacgtttttgtattaagtatttaaaacgcagtagttatctaccccttgaagaat |
207 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12433894 |
cctgtgtgtagacatgttaagatttatttgtaacgtttttgtattaagtatttaaaacgcagtagttatctaccccttgaagaat |
12433810 |
T |
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