View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8274_high_4 (Length: 461)
Name: NF8274_high_4
Description: NF8274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8274_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 16 - 446
Target Start/End: Original strand, 40985365 - 40985795
Alignment:
| Q |
16 |
atgaacaaactcacagaaatacaagaaataagacagacaaacaagaagcatgggaccacaaaaggtaatcacctgaaataatatgatcactcttagctta |
115 |
Q |
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| T |
40985365 |
atgaacaaactcacagaaatacaagaaataagacagacaaacaagaagcatgggaccacaaaaggtaatcacctgaaataatatgatcactcttagctta |
40985464 |
T |
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| Q |
116 |
cgactttgagcttcaaaaaggatcttttcaagaagtttcaattttccacttgcttttattccaatattaaaatgctcttcgacaggcagacctctagtga |
215 |
Q |
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| T |
40985465 |
cgacttttagcttcaaaaaggatcttttcaagaagttgcaattttccacttgcttttattccaatattaaaatgctcttcgacaggcagacctctagtga |
40985564 |
T |
|
| Q |
216 |
ctaaattattcagtgacgggttgaggagataaggatggttgcagcactgtaaacaacaacacatgtgcaatgatcattatgaagtcctgttgacaattca |
315 |
Q |
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| T |
40985565 |
ctaaattattcagtgacgggttgaggagataaggatggttgcagcactgtaaacaacaacacatgtgcaatgatcattatgaagccctattgacaattca |
40985664 |
T |
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| Q |
316 |
tttagagctattgcttttataaaagttgagtaagtattaatcatgaaaggaaggtttaactaaaaattggttgacagccaaacttattcagcttatctgc |
415 |
Q |
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| T |
40985665 |
tttagagctattgcttttataaaagttgagtaagtattaatcatgaaaggaaggtttaactaaaaattggtggacagccaaacttattcagcttatctgc |
40985764 |
T |
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| Q |
416 |
ttcttatcgtgcctaccttccttgttgagat |
446 |
Q |
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| T |
40985765 |
ttcttatcgtgcctaccttctttgttgagat |
40985795 |
T |
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