View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8280_high_8 (Length: 229)

Name: NF8280_high_8
Description: NF8280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8280_high_8
NF8280_high_8
[»] chr3 (40 HSPs)
chr3 (1-216)||(40880902-40881117)
chr3 (101-206)||(37273135-37273240)
chr3 (92-203)||(2175816-2175926)
chr3 (92-203)||(36646349-36646460)
chr3 (92-187)||(41724203-41724299)
chr3 (92-206)||(43115048-43115162)
chr3 (165-206)||(25182951-25182992)
chr3 (141-206)||(34707460-34707525)
chr3 (106-206)||(1809983-1810083)
chr3 (110-186)||(2152162-2152238)
chr3 (96-199)||(24281044-24281146)
chr3 (92-206)||(14548685-14548799)
chr3 (93-191)||(39602189-39602287)
chr3 (164-205)||(21574554-21574595)
chr3 (107-191)||(1217779-1217863)
chr3 (107-206)||(30923863-30923961)
chr3 (133-191)||(3015822-3015880)
chr3 (149-206)||(11039303-11039360)
chr3 (92-188)||(22214641-22214737)
chr3 (92-204)||(29113454-29113566)
chr3 (92-192)||(38462273-38462372)
chr3 (95-201)||(2719463-2719570)
chr3 (149-207)||(30750049-30750105)
chr3 (139-206)||(36200135-36200202)
chr3 (107-206)||(41452530-41452629)
chr3 (149-200)||(42817192-42817243)
chr3 (128-203)||(47132022-47132097)
chr3 (164-202)||(2606278-2606316)
chr3 (109-195)||(34414759-34414845)
chr3 (164-206)||(50015950-50015992)
chr3 (165-206)||(20194997-20195038)
chr3 (170-203)||(50211805-50211838)
chr3 (150-206)||(659824-659880)
chr3 (164-204)||(1395703-1395743)
chr3 (165-205)||(20170918-20170958)
chr3 (107-203)||(24624217-24624313)
chr3 (139-191)||(27290880-27290932)
chr3 (139-207)||(29771877-29771945)
chr3 (166-206)||(30443960-30444000)
chr3 (95-131)||(48323816-48323852)
[»] chr4 (39 HSPs)
chr4 (92-205)||(2996565-2996678)
chr4 (139-206)||(27123316-27123383)
chr4 (147-206)||(6428065-6428124)
chr4 (92-199)||(45128281-45128388)
chr4 (92-203)||(53315318-53315429)
chr4 (100-206)||(11264301-11264407)
chr4 (92-206)||(23819081-23819195)
chr4 (92-206)||(30207535-30207649)
chr4 (86-206)||(33534133-33534253)
chr4 (139-206)||(1965980-1966046)
chr4 (168-206)||(4071946-4071984)
chr4 (168-206)||(18628517-18628555)
chr4 (92-206)||(44319941-44320055)
chr4 (133-206)||(4691881-4691954)
chr4 (149-206)||(25583641-25583698)
chr4 (93-202)||(28300267-28300376)
chr4 (92-201)||(49219131-49219240)
chr4 (110-206)||(1137722-1137818)
chr4 (92-201)||(10192276-10192388)
chr4 (165-201)||(31642258-31642294)
chr4 (94-206)||(55870306-55870417)
chr4 (139-206)||(6987705-6987772)
chr4 (164-203)||(52419585-52419624)
chr4 (149-207)||(2841675-2841733)
chr4 (164-206)||(7368018-7368060)
chr4 (93-159)||(16494816-16494882)
chr4 (164-202)||(27725278-27725316)
chr4 (100-205)||(46415756-46415862)
chr4 (101-203)||(50742803-50742905)
chr4 (166-195)||(21683504-21683533)
chr4 (169-206)||(25904186-25904223)
chr4 (114-191)||(28614787-28614864)
chr4 (149-206)||(46090778-46090835)
chr4 (98-187)||(46110201-46110290)
chr4 (168-197)||(52428733-52428762)
chr4 (165-205)||(2236945-2236985)
chr4 (130-206)||(3176068-3176144)
chr4 (138-206)||(27721755-27721823)
chr4 (166-206)||(45622307-45622347)
[»] chr2 (52 HSPs)
chr2 (72-192)||(9556209-9556331)
chr2 (100-206)||(27699493-27699599)
chr2 (92-201)||(30552612-30552722)
chr2 (92-189)||(10285852-10285949)
chr2 (95-200)||(28933819-28933923)
chr2 (92-206)||(22681149-22681263)
chr2 (97-203)||(32821806-32821912)
chr2 (103-200)||(15120186-15120283)
chr2 (138-201)||(1494415-1494478)
chr2 (100-207)||(10567057-10567164)
chr2 (85-180)||(43141856-43141951)
chr2 (164-206)||(1318300-1318342)
chr2 (92-206)||(6993688-6993802)
chr2 (139-201)||(13220472-13220534)
chr2 (95-206)||(33942145-33942258)
chr2 (106-192)||(43065428-43065514)
chr2 (104-202)||(44606078-44606176)
chr2 (93-206)||(14316109-14316222)
chr2 (109-206)||(34652000-34652097)
chr2 (93-145)||(1899934-1899986)
chr2 (139-191)||(9878661-9878713)
chr2 (169-205)||(27317449-27317485)
chr2 (100-192)||(35810771-35810863)
chr2 (133-204)||(11063521-11063592)
chr2 (95-206)||(12313137-12313248)
chr2 (110-205)||(33192212-33192306)
chr2 (166-201)||(39622017-39622052)
chr2 (164-203)||(43808622-43808661)
chr2 (164-202)||(4550811-4550849)
chr2 (93-147)||(9477945-9477999)
chr2 (141-203)||(13234547-13234609)
chr2 (164-206)||(13866942-13866984)
chr2 (164-206)||(28803494-28803536)
chr2 (103-205)||(32106764-32106866)
chr2 (93-187)||(33941902-33941996)
chr2 (149-206)||(787381-787438)
chr2 (164-205)||(1741997-1742038)
chr2 (107-200)||(1939302-1939395)
chr2 (164-205)||(7862824-7862865)
chr2 (92-197)||(8017426-8017531)
chr2 (149-202)||(9478348-9478401)
chr2 (133-206)||(9996771-9996844)
chr2 (165-198)||(12140597-12140630)
chr2 (165-206)||(16451184-16451225)
chr2 (107-192)||(35378994-35379079)
chr2 (167-203)||(3973609-3973645)
chr2 (164-204)||(4350754-4350794)
chr2 (139-183)||(14451037-14451081)
chr2 (128-192)||(31096329-31096393)
chr2 (149-205)||(37474814-37474870)
chr2 (93-125)||(43199407-43199439)
chr2 (139-203)||(43456674-43456738)
[»] chr7 (50 HSPs)
chr7 (92-205)||(46082026-46082141)
chr7 (92-205)||(34754775-34754887)
chr7 (85-206)||(48157084-48157205)
chr7 (83-206)||(25670550-25670673)
chr7 (139-206)||(33894666-33894733)
chr7 (138-196)||(30496743-30496801)
chr7 (92-206)||(38010706-38010820)
chr7 (85-206)||(44151440-44151565)
chr7 (95-206)||(33645924-33646035)
chr7 (107-206)||(12242251-12242350)
chr7 (139-206)||(27626087-27626154)
chr7 (133-204)||(28727729-28727800)
chr7 (93-187)||(3610723-3610817)
chr7 (164-206)||(22387860-22387902)
chr7 (102-187)||(34035919-34036005)
chr7 (149-206)||(36537957-36538014)
chr7 (93-154)||(39907796-39907857)
chr7 (95-192)||(44615082-44615179)
chr7 (109-198)||(47427275-47427364)
chr7 (109-205)||(3468623-3468719)
chr7 (109-201)||(5276240-5276332)
chr7 (165-205)||(23214920-23214960)
chr7 (94-206)||(28691800-28691911)
chr7 (139-207)||(39360062-39360130)
chr7 (140-199)||(6857310-6857369)
chr7 (93-204)||(30535556-30535667)
chr7 (139-206)||(36598320-36598387)
chr7 (93-204)||(39542266-39542377)
chr7 (92-123)||(39711453-39711484)
chr7 (97-187)||(9038109-9038198)
chr7 (133-187)||(15740394-15740448)
chr7 (92-130)||(21453286-21453324)
chr7 (100-170)||(24363601-24363671)
chr7 (164-206)||(28340385-28340426)
chr7 (133-203)||(44808191-44808261)
chr7 (93-159)||(44821952-44822018)
chr7 (106-144)||(47046134-47046172)
chr7 (169-206)||(4970755-4970792)
chr7 (125-194)||(17983769-17983838)
chr7 (96-145)||(20881661-20881710)
chr7 (164-205)||(25422390-25422431)
chr7 (149-206)||(28844539-28844596)
chr7 (164-205)||(31003004-31003045)
chr7 (166-206)||(420427-420467)
chr7 (170-202)||(3804405-3804437)
chr7 (107-199)||(7244687-7244779)
chr7 (85-205)||(28165076-28165196)
chr7 (165-197)||(31149705-31149737)
chr7 (165-197)||(31167997-31168029)
chr7 (97-192)||(39967917-39968013)
[»] chr8 (39 HSPs)
chr8 (92-207)||(30389091-30389206)
chr8 (96-206)||(39551173-39551283)
chr8 (133-206)||(8629489-8629562)
chr8 (109-206)||(14949875-14949972)
chr8 (107-206)||(11569421-11569520)
chr8 (85-206)||(2091746-2091869)
chr8 (106-192)||(26473730-26473816)
chr8 (99-204)||(779027-779132)
chr8 (165-206)||(30918177-30918218)
chr8 (106-204)||(7918412-7918510)
chr8 (109-199)||(9540967-9541057)
chr8 (133-203)||(11770978-11771048)
chr8 (164-206)||(30987955-30987997)
chr8 (92-206)||(40071741-40071855)
chr8 (133-206)||(9700034-9700107)
chr8 (133-206)||(31875559-31875632)
chr8 (92-200)||(6509273-6509381)
chr8 (170-206)||(7918745-7918781)
chr8 (149-205)||(9572919-9572975)
chr8 (95-203)||(12851171-12851279)
chr8 (139-206)||(6950361-6950428)
chr8 (164-203)||(30191108-30191147)
chr8 (165-204)||(32840951-32840990)
chr8 (164-206)||(2487972-2488014)
chr8 (164-206)||(4251020-4251062)
chr8 (107-201)||(8060676-8060770)
chr8 (93-203)||(31862486-31862595)
chr8 (164-206)||(41442417-41442459)
chr8 (165-202)||(10120822-10120859)
chr8 (169-206)||(11056630-11056667)
chr8 (149-202)||(26371014-26371067)
chr8 (168-197)||(27412855-27412884)
chr8 (102-191)||(35220702-35220791)
chr8 (164-208)||(5069761-5069805)
chr8 (95-206)||(21130609-21130718)
chr8 (166-206)||(26771332-26771372)
chr8 (166-206)||(31915257-31915297)
chr8 (166-206)||(35534576-35534616)
chr8 (164-192)||(45071438-45071466)
[»] chr6 (47 HSPs)
chr6 (139-206)||(2460115-2460182)
chr6 (92-208)||(4006706-4006822)
chr6 (92-206)||(281812-281926)
chr6 (113-199)||(34939526-34939612)
chr6 (92-204)||(8035114-8035226)
chr6 (149-201)||(8348275-8348327)
chr6 (133-197)||(10616514-10616578)
chr6 (149-207)||(33500443-33500501)
chr6 (92-192)||(30523652-30523751)
chr6 (95-187)||(31624085-31624177)
chr6 (139-199)||(32577957-32578017)
chr6 (133-200)||(9027611-9027678)
chr6 (100-203)||(20368147-20368250)
chr6 (95-205)||(10476087-10476196)
chr6 (166-204)||(32171349-32171387)
chr6 (164-206)||(32917261-32917303)
chr6 (92-197)||(4246402-4246507)
chr6 (106-191)||(7931705-7931790)
chr6 (165-206)||(27857423-27857464)
chr6 (158-194)||(725631-725667)
chr6 (92-180)||(2112192-2112280)
chr6 (125-205)||(33832238-33832318)
chr6 (170-205)||(7485102-7485137)
chr6 (139-206)||(10031771-10031838)
chr6 (149-192)||(20377898-20377941)
chr6 (133-187)||(1575928-1575982)
chr6 (92-130)||(2727896-2727934)
chr6 (139-197)||(4080955-4081013)
chr6 (107-201)||(4324423-4324516)
chr6 (139-197)||(5566150-5566208)
chr6 (149-191)||(30863295-30863337)
chr6 (164-206)||(33116648-33116690)
chr6 (91-191)||(781371-781472)
chr6 (164-201)||(2263256-2263293)
chr6 (108-181)||(3528811-3528884)
chr6 (149-206)||(5731618-5731675)
chr6 (93-130)||(20671905-20671942)
chr6 (164-197)||(31338040-31338073)
chr6 (149-198)||(31594356-31594405)
chr6 (92-157)||(31671087-31671152)
chr6 (164-205)||(33498683-33498724)
chr6 (164-192)||(1669776-1669804)
chr6 (164-204)||(2027764-2027804)
chr6 (170-206)||(2455683-2455719)
chr6 (164-192)||(6310228-6310256)
chr6 (165-205)||(9559503-9559543)
chr6 (139-199)||(30604935-30604995)
[»] chr1 (61 HSPs)
chr1 (46-205)||(7218039-7218199)
chr1 (92-200)||(25005765-25005875)
chr1 (92-202)||(38867799-38867909)
chr1 (92-205)||(25479573-25479686)
chr1 (139-206)||(4868439-4868505)
chr1 (92-191)||(17420195-17420294)
chr1 (87-174)||(27887114-27887201)
chr1 (100-191)||(11639395-11639486)
chr1 (111-206)||(32515405-32515500)
chr1 (92-206)||(3224415-3224529)
chr1 (138-200)||(4548759-4548821)
chr1 (109-187)||(4699598-4699676)
chr1 (139-197)||(6262777-6262835)
chr1 (92-186)||(29045896-29045990)
chr1 (92-206)||(31517704-31517818)
chr1 (97-159)||(35351036-35351098)
chr1 (166-203)||(5591933-5591970)
chr1 (85-206)||(30257668-30257789)
chr1 (100-201)||(33185927-33186027)
chr1 (94-187)||(37842338-37842431)
chr1 (149-206)||(38170654-38170711)
chr1 (149-202)||(42336664-42336717)
chr1 (93-145)||(1432508-1432560)
chr1 (93-157)||(4700079-4700143)
chr1 (164-200)||(8780394-8780430)
chr1 (94-206)||(11695855-11695967)
chr1 (151-203)||(15579533-15579585)
chr1 (92-201)||(28689421-28689532)
chr1 (139-187)||(33108605-33108653)
chr1 (93-173)||(36151502-36151582)
chr1 (92-192)||(39270403-39270503)
chr1 (170-206)||(43371855-43371891)
chr1 (167-206)||(4033981-4034020)
chr1 (138-201)||(4481968-4482031)
chr1 (93-200)||(6279392-6279499)
chr1 (107-198)||(10744308-10744399)
chr1 (91-205)||(35668963-35669075)
chr1 (107-169)||(2522636-2522698)
chr1 (96-205)||(4549506-4549616)
chr1 (92-206)||(17269242-17269356)
chr1 (99-205)||(26779891-26779996)
chr1 (164-206)||(34536222-34536264)
chr1 (154-196)||(45234247-45234289)
chr1 (164-206)||(49692016-49692058)
chr1 (165-206)||(16980868-16980909)
chr1 (92-145)||(26946472-26946525)
chr1 (106-199)||(27963341-27963434)
chr1 (149-206)||(29929585-29929642)
chr1 (151-200)||(37941955-37942004)
chr1 (149-206)||(38001645-38001702)
chr1 (133-190)||(43722308-43722365)
chr1 (92-205)||(44422691-44422804)
chr1 (164-205)||(49521770-49521811)
chr1 (166-206)||(2295163-2295203)
chr1 (170-206)||(4200304-4200340)
chr1 (164-204)||(7356504-7356544)
chr1 (107-159)||(15558224-15558276)
chr1 (139-199)||(24153320-24153380)
chr1 (85-125)||(34179917-34179957)
chr1 (93-145)||(49888760-49888812)
chr1 (166-206)||(50644218-50644258)
[»] chr5 (42 HSPs)
chr5 (93-202)||(10272399-10272508)
chr5 (85-201)||(4619692-4619808)
chr5 (107-191)||(41957430-41957514)
chr5 (103-206)||(37611179-37611282)
chr5 (103-206)||(37787909-37788012)
chr5 (92-206)||(37526163-37526277)
chr5 (92-206)||(37588324-37588438)
chr5 (133-194)||(13604825-13604886)
chr5 (92-205)||(14295498-14295611)
chr5 (93-189)||(37794679-37794774)
chr5 (103-206)||(12242674-12242777)
chr5 (93-199)||(15246826-15246933)
chr5 (149-192)||(29363057-29363100)
chr5 (92-206)||(37690600-37690715)
chr5 (93-206)||(7674641-7674754)
chr5 (92-206)||(10391333-10391448)
chr5 (25-203)||(35960338-35960516)
chr5 (168-204)||(8090004-8090040)
chr5 (154-206)||(10152388-10152440)
chr5 (92-180)||(15003504-15003592)
chr5 (93-204)||(2568651-2568762)
chr5 (92-159)||(7319398-7319465)
chr5 (99-194)||(17368675-17368770)
chr5 (119-206)||(28586730-28586817)
chr5 (164-206)||(10907442-10907484)
chr5 (93-159)||(12425564-12425630)
chr5 (164-206)||(12459965-12460007)
chr5 (150-204)||(14980559-14980613)
chr5 (139-205)||(29590594-29590660)
chr5 (164-202)||(38047847-38047885)
chr5 (149-190)||(5531083-5531124)
chr5 (169-206)||(29336699-29336736)
chr5 (139-192)||(30269711-30269764)
chr5 (133-197)||(2092518-2092582)
chr5 (150-206)||(11457148-11457204)
chr5 (96-192)||(15402807-15402903)
chr5 (166-206)||(15905364-15905404)
chr5 (166-206)||(16457942-16457982)
chr5 (166-206)||(19113083-19113123)
chr5 (92-192)||(19369305-19369405)
chr5 (138-194)||(21768173-21768229)
chr5 (92-196)||(36542256-36542360)
[»] scaffold0311 (1 HSPs)
scaffold0311 (139-206)||(10581-10648)
[»] scaffold0608 (1 HSPs)
scaffold0608 (138-201)||(9606-9669)
[»] scaffold0003 (1 HSPs)
scaffold0003 (106-205)||(306332-306431)
[»] scaffold0024 (1 HSPs)
scaffold0024 (139-205)||(27615-27681)
[»] scaffold0459 (1 HSPs)
scaffold0459 (165-206)||(6611-6652)
[»] scaffold0366 (1 HSPs)
scaffold0366 (165-206)||(6609-6650)


Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 40881117 - 40880902
Alignment:
Q  1 aataagagtttacaatataagcccttatcatttaagtacttactcataagctatttccataatgaaatataaaaataaagtcagtgtttcaatataagct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881117 aataagagtttacaatataagcccttatcatttaagtacttactcataagctatttccataatgaaatataaaaataaagtcagtgtttcaatataagct 40881018  T
Q  101 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881017 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 40880918  T
Q  201 tctcacgtatgttcat 216  Q
    ||||||||||||||||    
T  40880917 tctcacgtatgttcat 40880902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 37273135 - 37273240
Alignment:
Q  101 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    ||||| ||||||||||| ||||| | ||||| ||||  ||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||||||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacag 37273234  T
Q  201 tctcac 206  Q
    ||||||    
T  37273235 tctcac 37273240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 2175926 - 2175816
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||||||||| ||||||||| ||| ||||  ||||| ||| ||||| |||||| |||||   ||||||||||||||||||||||| || |    
T  2175926 atataagctataaattgttt-cataaactacccttgagagtttatagaaacaagttgaaaacagcttacaaacatgtcataagttgttttcataaactat 2175828  T
Q  192 ctcaaacagtct 203  Q
    |||||| |||||    
T  2175827 ctcaaatagtct 2175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 36646460 - 36646349
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||| ||||| |||||||||||| ||||||||||||  ||||| ||||||| | |||||| |||| || |||| ||||||| |||| ||||||||||    
T  36646460 atataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctct 36646361  T
Q  192 ctcaaacagtct 203  Q
    | |||| |||||    
T  36646360 cccaaatagtct 36646349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 41724203 - 41724299
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttata-aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    |||||||||||||| ||||||||| | ||||||| ||||  ||||| |||||||| | ||||||||||| || ||||||||||||||||| ||||||    
T  41724203 atataagctataaactgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagttgtttccataag 41724299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 43115048 - 43115162
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| |||||||||| ||||||| | ||||  ||||  ||||||| | ||||||| ||| || ||||||||||||||||| ||||| ||||    
T  43115048 atataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactct 43115147  T
Q  192 ctcaaacagtctcac 206  Q
      |||||| ||||||    
T  43115148 tccaaacaatctcac 43115162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 25182992 - 25182951
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25182992 atgtcataagttgttttcataagctctctcaaacagtctcac 25182951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 34707525 - 34707460
Alignment:
Q  141 ataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| ||||||||||| || ||||||| |||||||||||| ||| ||||||||||||||||||    
T  34707525 ataagttgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcac 34707460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 1809983 - 1810083
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    |||||||||||| ||||||||   || ||||| |||||||   ||||||||| | || ||||||||||||||||| | |||||||||||||| |||||||    
T  1809983 ttgttttcataagctatcctacgaaacttatagaaataagcagaaaacaactcatggacatgtcataagttgtttccgtaagctctctcaaatagtctca 1810082  T
Q  206 c 206  Q
    |    
T  1810083 c 1810083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 2152238 - 2152162
Alignment:
Q  110 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataa 186  Q
    |||||||||||||||| ||||  ||||| ||| ||||| |||||| ||||||  |||||||||||||||||||||||    
T  2152238 tttcataaactatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttttcataa 2152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 24281044 - 24281146
Alignment:
Q  96 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 195  Q
    |||||||||| |||| |||||  ||||| | ||||  |||| ||| |||||| ||||||||||| ||  || ||||||||||||||||||||||||||||    
T  24281044 aagctataaactgttgtcatag-ctatcatggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctctca 24281142  T
Q  196 aaca 199  Q
    ||||    
T  24281143 aaca 24281146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 14548799 - 14548685
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| ||||||||||||  ||| || ||||  ||||  ||||||| | |||||| | ||     |||||||| ||||||||||||||||||    
T  14548799 atataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctct 14548700  T
Q  192 ctcaaacagtctcac 206  Q
    |||||||||||||||    
T  14548699 ctcaaacagtctcac 14548685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 39602287 - 39602189
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||| |||||  ||||||||||| ||||| | ||||| |||| |||||||||| ||||||| ||| |  ||||||||||| ||| ||||||||||||    
T  39602287 tataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctct 39602189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 21574554 - 21574595
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  21574554 catgtcataagttgttttcataagctctcccaaacagtctca 21574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 1217863 - 1217779
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||| ||||||| ||||| |||| ||| |||| | ||||||||||| || ||||||||||| ||||| | ||||||||    
T  1217863 tgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgtaagctct 1217779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 30923961 - 30923863
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| ||||||||||||  ||||| ||||||| | |||||| ||||  | ||||||||||| ||||| ||| |||||||  ||||||||||||    
T  30923961 tgttttcataacctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttccat-agctctcataaacagtctcac 30923863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 3015880 - 3015822
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||| |||||||| | |||||| |||| || ||||||||||||||||||||||||||||    
T  3015880 ttattaaaataagatgaaaacatcttatggacatgtcataagttgttttcataagctct 3015822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 11039360 - 11039303
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| || ||||||||||  ||||| |||||||||| ||||||||||||||    
T  11039360 aaaacaacttatggacatgtcataatatgtttccataagctctttcaaacagtctcac 11039303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 22214737 - 22214641
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagc 188  Q
    |||||| |||||| |||||||||||| ||||||||||||  |||   ||||||| | |||||| |||| || ||||||| | ||| |||||||||||    
T  22214737 atataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtcaaatgtttttttcataagc 22214641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 29113454 - 29113566
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||||| | ||||||| || ||||||| |  |||| |||||||  | |||| | ||||  | ||||| |||||||||||   ||||||||    
T  29113454 atataagctataaattttgttcataagctgtcctagaaagcttatgaaaataaaatgaaaatagcttataggcatgttataagttgtttctgtaagctct 29113553  T
Q  192 ctcaaacagtctc 204  Q
    |||||||||||||    
T  29113554 ctcaaacagtctc 29113566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 38462273 - 38462372
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||| |||||||| ||||||||||| |||||| ||| |  ||||  ||||||| | ||||||||||| ||||| ||||||| ||||||  |||||||||    
T  38462273 atatatgctataaactgttttcataagctatccaagatagcttatggaaataagctgaaaacaacttatggtcaagtcataa-ttgtttgtataagctct 38462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 2719463 - 2719570
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataagctctct 193  Q
    ||||||||||| ||||||||||| ||||| | ||||| |||| |||||||| | | ||||||||| || | ||    |||||||||||| |||| |||||    
T  2719463 taagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggacaatagtttaagttgttttcctaagttctct 2719562  T
Q  194 caaacagt 201  Q
    ||||||||    
T  2719563 caaacagt 2719570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 30750049 - 30750105
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 207  Q
    |||||| |||| || |||||||||||||||||||||  ||||||||||| |||||||||    
T  30750049 aaaacagcttatggacatgtcataagttgttttcat--gctctctcaaatagtctcacg 30750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 36200135 - 36200202
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| | ||||||||||| || ||||||||||||||||| || || ||||||| |||| ||||||    
T  36200135 aaataagctgaaaacaacttatggacatgtcataagttgtttacaaaaactctctccaacattctcac 36200202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 41452530 - 41452629
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| ||||||| |||||||| |  ||||||| | |||||| ||||  | ||| |||||||||||||  ||||| ||||||||| | ||||||    
T  41452530 tgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagttgtttctataaggtctctcaaatactctcac 41452629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 42817243 - 42817192
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    ||||||||||| || ||||||||| | ||||| |||||||||||||||||||    
T  42817243 aaaacaacttatggacatgtcatatgctgtttccataagctctctcaaacag 42817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 47132022 - 47132097
Alignment:
Q  128 agaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    |||| ||||||||||||| | ||||||  ||| ||  ||| ||||||||||||||||||| ||||||||| |||||    
T  47132022 agaacttataaaaataagctgaaaacagtttatggatatgacataagttgttttcataagttctctcaaatagtct 47132097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 2606316 - 2606278
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  2606316 catgtcataagttgtttccataagatctctcaaacagtc 2606278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 34414845 - 34414759
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 195  Q
    ||||||||||||||| | ||||  |||| |||||||| | ||||||||||| |  |||| ||||  |||||||||||||||| ||||    
T  34414845 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 34414759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 50015950 - 50015992
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||    
T  50015950 catgtcatacgttcttttcataagttctctcaaacagtctcac 50015992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 20195038 - 20194997
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||  ||||||||||||||||| |||||||||||||    
T  20195038 atgtcataaactgttttcataagctctcacaaacagtctcac 20194997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 50211805 - 50211838
Alignment:
Q  170 ataagttgttttcataagctctctcaaacagtct 203  Q
    |||||||||||||||||| |||||||||||||||    
T  50211805 ataagttgttttcataagttctctcaaacagtct 50211838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 659880 - 659824
Alignment:
Q  150 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||| || ||||||||||| |||||  || ||||||| |||||||||||||    
T  659880 aaacaacttatggacatgtcataagctgtttctattagctctcacaaacagtctcac 659824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 1395703 - 1395743
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    |||||| |||||||||||  |||||||||||||||||||||    
T  1395703 catgtcttaagttgtttttgtaagctctctcaaacagtctc 1395743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 20170918 - 20170958
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||| |||||||||  ||||||||||||    
T  20170918 atgtcataagttgtttttataagctcttacaaacagtctca 20170958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 24624217 - 24624313
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||||||  |||||||||| |  ||||   |||||| | ||||||  ||| || ||||||||||| ||||||||||||||||  ||||||||||    
T  24624217 tgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtct 24624313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 27290932 - 27290880
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||| | |||||| |||| || ||||||||||| ||||||||||||||||    
T  27290932 aaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctct 27290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 29771877 - 29771945
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 207  Q
    ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||  ||| |||||||||    
T  29771877 aaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagctctcataaatagtctcacg 29771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 30443960 - 30444000
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  30443960 tgtcataagctgttttcataagctctaccaaacagtctcac 30444000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 48323816 - 48323852
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaa 131  Q
    |||||||||||||||||||||||| |||| |||||||    
T  48323816 taagctataaattgttttcataaattatcatagagaa 48323852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 2996565 - 2996678
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||| ||||| |||||||||||| ||||| | ||||   ||| |||||||||| |||| | |||| || ||||||||||||||||||||||||||||    
T  2996565 atataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctct 2996664  T
Q  192 ctcaaacagtctca 205  Q
    ||||||||||||||    
T  2996665 ctcaaacagtctca 2996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 27123383 - 27123316
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||    
T  27123383 aaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcac 27123316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 6428065 - 6428124
Alignment:
Q  147 ttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||| ||||||| || ||||||||||||||||||||||| ||||||||||| |||||||    
T  6428065 ttaaatcaacttatggacatgtcataagttgttttcataatctctctcaaactgtctcac 6428124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 45128388 - 45128281
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||||||||||||||||||| ||||| | |  ||||  ||||||| | |||||| || | || ||||  || |||||||| ||||||||||    
T  45128388 atataagctataaattgttttcataaactgtcctataaagcttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctct 45128289  T
Q  192 ctcaaaca 199  Q
    ||||||||    
T  45128288 ctcaaaca 45128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 53315318 - 53315429
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  |||| ||| |||| | ||||||||  |||| |||||||||| |||| | |||| || ||||| ||| ||||||||||||||||||    
T  53315318 atataagctataagctgttctcaaaaacaaacctagagagcttatgaaaataagttaaaaatagcttatggacatgtgatatgttgttttcataagctct 53315417  T
Q  192 ctcaaacagtct 203  Q
    | |||| |||||    
T  53315418 cacaaatagtct 53315429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 11264301 - 11264407
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||| |||||||||||| | ||||||||||  ||||  ||||||||| ||||||  ||| || |||||||||||||| ||  ||| |||||| ||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaaca 11264400  T
Q  200 gtctcac 206  Q
    |||||||    
T  11264401 gtctcac 11264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 23819081 - 23819195
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||| |||||  ||||||||||| ||||| |  |||  ||||| ||||||| | ||||||||||| || ||||||||||| ||||||| ||| ||||    
T  23819081 atataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactct 23819180  T
Q  192 ctcaaacagtctcac 206  Q
      |||||||||||||    
T  23819181 tccaaacagtctcac 23819195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 30207649 - 30207535
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| |||||||||||| ||| | ||||||  ||||  ||||||| | |||||| ||||| | ||||||||| | |||| | |||||||||    
T  30207649 atataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcatatgctgttcttataagctct 30207550  T
Q  192 ctcaaacagtctcac 206  Q
    ||| | |||||||||    
T  30207549 ctcgatcagtctcac 30207535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 33534253 - 33534133
Alignment:
Q  86 gtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcata 185  Q
    ||||| |||||| ||| || |||||||| |||| |||  | ||||  |||| |||||||| | ||||||||||| ||  |||||| || |||||||||||    
T  33534253 gtttctatataatctacaagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcata 33534154  T
Q  186 agctctctcaaacagtctcac 206  Q
    |||||||||||| | ||||||    
T  33534153 agctctctcaaatactctcac 33534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 1965980 - 1966046
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||| |||| |  ||||||||||||||||||||||||||| || ||||||||||||    
T  1965980 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataagctc-ctaaaacagtctcac 1966046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 4071946 - 4071984
Alignment:
Q  168 tcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  4071946 tcataagctgttttcataagctctctcaaacagtctcac 4071984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 18628555 - 18628517
Alignment:
Q  168 tcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcac 18628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 44319941 - 44320055
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||| ||  | |||| |||| ||||||||||||| |||| ||||| |||| |||| | || | ||  |  |||||| |||||||||||||||||    
T  44319941 atataagctacaagctattttgataagctatcctagagaacttatgaaaattagttgaaaatagctaatggatacatcataatttgttttcataagctct 44320040  T
Q  192 ctcaaacagtctcac 206  Q
    | |||||||||||||    
T  44320041 cccaaacagtctcac 44320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 4691881 - 4691954
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||| |||||||| | |||||||| || || ||||||||||||||||| |||||| | ||||||| ||||||||    
T  4691881 ttatgaaaataagctgaaaacaacatatgggcatgtcataagttgtttccataagttttctcaaatagtctcac 4691954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 25583641 - 25583698
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||  || ||||||||||||||||| ||||||| ||| |||||||||||||    
T  25583641 aaaacaacttttggacatgtcataagttgtttgcataagcgctcccaaacagtctcac 25583698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 28300376 - 28300267
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||||||| | ||||||||  ||||| |  |||  |||| |||||||||| ||||||||||| |  ||||||||| | |||||||||||  ||||    
T  28300376 tataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctc 28300277  T
Q  193 tcaaacagtc 202  Q
    |||| |||||    
T  28300276 tcaatcagtc 28300267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 49219131 - 49219240
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| |||||||||||||||||| || |||  ||||  ||||||| | ||||||||||| ||  |||  || | ||||||||||||| |||    
T  49219131 atataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatggagatgctattaattgttttcataaggtct 49219230  T
Q  192 ctcaaacagt 201  Q
    |  |||||||    
T  49219231 cctaaacagt 49219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 1137722 - 1137818
Alignment:
Q  110 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||| |||||  ||||  ||||||  | ||||||||||| |  ||||||||||| |||||||||||| ||||  ||||||| ||||    
T  1137722 tttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagtgtcac 1137818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 10192276 - 10192388
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacg----gtcatgtcataagttgttttcataag 187  Q
    ||||||| ||||| ||||||||| || ||||||| |||| | ||| |||||||||| |||||||||||||      ||||| ||||||| |||| |||||    
T  10192276 atataagttataagttgttttcaaaagctatcctggaga-gctatgaaaataagttgaaaacaacttacgaacatgcatgttataagttatttttataag 10192374  T
Q  188 ctctctcaaacagt 201  Q
     |||||||||||||    
T  10192375 ttctctcaaacagt 10192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 31642258 - 31642294
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagt 201  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31642258 atgtcataagttgttttcataagttctctcaaacagt 31642294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 206
Target Start/End: Complemental strand, 55870417 - 55870306
Alignment:
Q  94 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 193  Q
    ||||||||||| |||||||||||| |||  | |||||  |||||| | ||| ||||||||| |||| || || |||||||  | |||||||||||| |||    
T  55870417 ataagctataagttgttttcataagctaatcaagagagcttataata-taattttaaaacagcttatggacaggtcataaacttttttcataagctatct 55870319  T
Q  194 caaacagtctcac 206  Q
    |||| ||||||||    
T  55870318 caaagagtctcac 55870306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 6987772 - 6987705
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||| |  ||| || ||||||||||||||| | ||||||||||| |||||||||||||    
T  6987772 aaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcac 6987705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 52419624 - 52419585
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  52419624 catgtaataagttgttttcataaggtctctcaaacagtct 52419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 2841675 - 2841733
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 207  Q
    |||||||||||  | |||||||||||||| |||||||| ||||| |||||| |||||||    
T  2841675 aaaacaacttattgacatgtcataagttgctttcataaactctcgcaaacaatctcacg 2841733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 7368060 - 7368018
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||    
T  7368060 catgtcataagctgttttcatgagctctcccaaacagtctcac 7368018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 16494882 - 16494816
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 159  Q
    |||||||||||| |||||||||||| ||||| | ||||  || ||||| |||||| |||||||||||    
T  16494882 tataagctataagttgttttcataagctatcttggagagcttgtaaaactaagttgaaaacaactta 16494816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 27725278 - 27725316
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  27725278 catgtcataagttatttccataagctctctcaaacagtc 27725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 205
Target Start/End: Complemental strand, 46415862 - 46415756
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc-aaac 198  Q
    ||||| || ||||||||| ||||||| ||||  |||  ||||| || | ||||||||||| || ||||||||| ||||||| ||||| ||||| | ||||    
T  46415862 tataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgtttgcataaactctcccaaaac 46415763  T
Q  199 agtctca 205  Q
    |||||||    
T  46415762 agtctca 46415756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 50742905 - 50742803
Alignment:
Q  101 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    |||| |||||||||||| ||||||| ||||  |||| ||||| |||| ||||||   || |  |||||||| |  |||||||||||| ||||||||||||    
T  50742905 ataacttgttttcataagctatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 50742806  T
Q  201 tct 203  Q
    |||    
T  50742805 tct 50742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 21683533 - 21683504
Alignment:
Q  166 tgtcataagttgttttcataagctctctca 195  Q
    ||||||||||||||||||||||||||||||    
T  21683533 tgtcataagttgttttcataagctctctca 21683504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 25904223 - 25904186
Alignment:
Q  169 cataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  25904223 cataagctgttttcataagctctcccaaacagtctcac 25904186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 28614864 - 28614787
Alignment:
Q  114 ataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||| ||||||||||||| |||| |||||||| | |||| | |||| ||  ||||||||| |||||| ||||||||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagcttatggatatgtcataaattgtttccataagctct 28614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 46090835 - 46090778
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||  |||||| |||| |||||||||||||| ||||| ||||||||||    
T  46090835 aaaacaactaacgaacatgtcttaagctgttttcataagctatctcatacagtctcac 46090778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 46110201 - 46110290
Alignment:
Q  98 gctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    |||||||| ||||||||||| ||||  | ||||  ||||| ||||||| | ||||||||||| |   || ||||||||||||||||||||    
T  46110201 gctataaactgttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagtatatcataagttgttttcataag 46110290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 52428733 - 52428762
Alignment:
Q  168 tcataagttgttttcataagctctctcaaa 197  Q
    ||||||||||||||||||||||||||||||    
T  52428733 tcataagttgttttcataagctctctcaaa 52428762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 2236985 - 2236945
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  2236985 atgtgataagttgttttcataagttatctcaaacagtctca 2236945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 3176144 - 3176068
Alignment:
Q  130 aagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||  ||||||| | |||||||||||  | |||| |||||| |||||||||||||||||  ||||||| ||||    
T  3176144 aagttatggaaataagctgaaaacaacttatagacatgacataagatgttttcataagctctcctaaacagtttcac 3176068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 27721755 - 27721823
Alignment:
Q  138 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||| | |||||| |||| ||  ||||||||||| ||||| ||||||||||| ||||| ||||||    
T  27721755 aaaataagctgaaaacagcttatggatatgtcataagtagtttttataagctctcttaaacaatctcac 27721823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 45622307 - 45622347
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||||||||||| |||| | |||||||||||    
T  45622307 tgtcataagttgttttcataagttctcccgaacagtctcac 45622347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 9556209 - 9556331
Alignment:
Q  72 aaaataaagtca--gtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtc 169  Q
    ||||||||||||  ||||||  ||| |||||||||| ||||||||||| |||||||||| |  |||| |||||||||| ||| | ||||| || ||||||    
T  9556209 aaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtc 9556308  T
Q  170 ataagttgttttcataagctctc 192  Q
    || ||||||||||||||||||||    
T  9556309 attagttgttttcataagctctc 9556331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 27699599 - 27699493
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||| |||||||||||||||||| | |||||   ||  ||||||| | |||||| | |  ||| |||||||||||||||||||||| ||||||||||||    
T  27699599 tataagttgttttcataaactatcatggagaatcgatggaaataagctgaaaacagcatgtggtgatgtcataagttgttttcataaactctctcaaaca 27699500  T
Q  200 gtctcac 206  Q
    |||||||    
T  27699499 gtctcac 27699493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 30552722 - 30552612
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaa-caacttacggtcatgtcataagttgttttcataagctc 190  Q
    |||| ||||||||||| ||||||||||||||||||||||  ||||  ||||||| | |||| |||||||  | |||||||||||||||||  |||| ||     
T  30552722 atatcagctataaattattttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgtttcgataaccta 30552623  T
Q  191 tctcaaacagt 201  Q
    |||||||||||    
T  30552622 tctcaaacagt 30552612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 10285852 - 10285949
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 189  Q
    ||||||||||||| | |||| ||||| ||| | ||||||| ||||  ||||||||| |||||| |||| || ||||||||||||| ||||||||||||    
T  10285852 atataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataagct 10285949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 28933819 - 28933923
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    |||| |||||||||||||||||| ||||||||||||  | ||| ||||||||| |||||| | || |  |||| |||||||||||||||||||||||  |    
T  28933819 taagttataaattgttttcataagctatcctagagagctgatagaaataagttgaaaacagc-tatgaacatgccataagttgttttcataagctcttcc 28933917  T
Q  195 aaacag 200  Q
    ||||||    
T  28933918 aaacag 28933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 22681263 - 22681149
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  ||||||||||| ||||||||||||| ||||  ||||||| | |||||| |||| |  ||||| ||  |||||||||||||   ||    
T  22681263 atataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcataaaaact 22681164  T
Q  192 ctcaaacagtctcac 206  Q
    |||||||| ||||||    
T  22681163 ctcaaacattctcac 22681149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 32821806 - 32821912
Alignment:
Q  97 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaa 196  Q
    ||||||||| ||||||||||| |||||||| |||  ||||| ||||||  | |||||| |||| || |||||||||||||||||  |||| ||||  |||    
T  32821806 agctataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaa 32821905  T
Q  197 acagtct 203  Q
    |||||||    
T  32821906 acagtct 32821912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 15120186 - 15120283
Alignment:
Q  103 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    ||||||||||| ||| ||||| | ||||  |||| |||||||| |||||||| || | |  ||||||||||||||||| ||||||||||| |||||||    
T  15120186 aaattgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacag 15120283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 1494478 - 1494415
Alignment:
Q  138 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    |||||||| | ||||||  ||| || ||||||||||| ||||||||||||||||||||||||||    
T  1494478 aaaataagctaaaaacagtttatggacatgtcataagctgttttcataagctctctcaaacagt 1494415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 10567057 - 10567164
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    |||||| ||||| |||||||||| || ||||  || | ||||| || | ||||||||||| | |||||||||||| ||||| || || ||||| ||||||    
T  10567057 tataaactgtttccataaactattctggagagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgtttccacaatctctcccaaaca 10567156  T
Q  200 gtctcacg 207  Q
    ||||||||    
T  10567157 gtctcacg 10567164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 43141856 - 43141951
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 180  Q
    |||||| |||||||||||||  ||||||||||| |||||||  |||  ||||  ||||||  | ||||||||||| || |||||||||||||||||    
T  43141856 tgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgttt 43141951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 1318300 - 1318342
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  1318300 catgtcataagatgttttcataagctctcacaaacagtctcac 1318342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 6993802 - 6993688
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||  |||||||||||| |||| || ||||  |||| |||||||| | ||||  ||||| || |||| |||||| | ||| |||||| |||    
T  6993802 atataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatggacatgccataagctatttacataagttct 6993703  T
Q  192 ctcaaacagtctcac 206  Q
     ||||||||||||||    
T  6993702 atcaaacagtctcac 6993688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 13220472 - 13220534
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    |||||||||||||||| |||| |  || ||||||||||||||| ||||| |||||||||||||    
T  13220472 aaataagtttaaaacagcttatgaacaagtcataagttgtttttataagttctctcaaacagt 13220534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 33942145 - 33942258
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt--cataagctctc 192  Q
    |||||||||| |||||||||||| | ||| ||||||  | || ||||| || | |||||| |||| |  ||||||||||||||| |   |||||||||||    
T  33942145 taagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcataagttgtctctccataagctctc 33942244  T
Q  193 tcaaacagtctcac 206  Q
    ||||||||||||||    
T  33942245 tcaaacagtctcac 33942258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 43065514 - 43065428
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||||||  |||| | ||||  ||||  ||||||| | ||||||| ||| || |||||||||||||||||||||||||||||    
T  43065514 ttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 44606176 - 44606078
Alignment:
Q  104 aattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||  ||| ||| |  | |||| ||||| || | ||||||||||| || |||||||||||||||||||||||| |||  |||||||||    
T  44606176 aattgttttcataagttattctaaaacacttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataagttcttccaaacagtc 44606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 14316222 - 14316109
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||||||||| ||||||||  | ||| | |||||| |||| ||||||| | |||||| ||||     |||||||||||||||| |||||||||||    
T  14316222 tataagctataaattattttcatatgcaatctttgagaagctatagaaataagctgaaaacagcttatacatatgtcataagttgtttccataagctctc 14316123  T
Q  193 tcaaacagtctcac 206  Q
      ||| ||||||||    
T  14316122 caaaatagtctcac 14316109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 206
Target Start/End: Complemental strand, 34652097 - 34652000
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| ||||| | ||||  ||||  ||||||||| |||||| |||| || |||||||||||||||||  ||||||| |||| ||| |||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataagctttctccaaccgtctcac 34652000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 1899934 - 1899986
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 145  Q
    ||||||||||||| |||||||||||||||| ||| |||  |||||||||||||    
T  1899934 tataagctataaaatgttttcataaactattctaaagagtttataaaaataag 1899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 9878713 - 9878661
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||  ||||||||||| || ||||||||||||||||| ||||||||||    
T  9878713 aaataagtcgaaaacaacttatggacatgtcataagttgtttccataagctct 9878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 27317449 - 27317485
Alignment:
Q  169 cataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctca 27317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 35810863 - 35810771
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||| ||||||||||||  ||||||||||||| |||| ||| |||| | |||| |||||| || || | ||||||||||||  ||||||||||    
T  35810863 tatatattgttttcatacgctatcctagagaacttatgaaagtaagctaaaaataacttatggccaggccataagttgtttctataagctctc 35810771  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 11063521 - 11063592
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    |||| |||||||| | ||||||||||| || ||||||||||  ||||| ||||||||||  |||||||||||    
T  11063521 ttatgaaaataagctaaaaacaacttatggacatgtcataatatgtttccataagctcttccaaacagtctc 11063592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 12313248 - 12313137
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    ||||||| ||||||||| ||||| ||||| | ||||  |||| |||||||| | ||| ||||||| |  |||| |||||| |||||||||||  |||| |    
T  12313248 taagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctccc 12313149  T
Q  195 aaacagtctcac 206  Q
    ||||| ||||||    
T  12313148 aaacaatctcac 12313137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 33192212 - 33192306
Alignment:
Q  110 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    |||||||| ||||||| ||||  ||||||| ||||| | |||||| |||| ||  |||||||||  |||||||||||| ||| |||||||||||||    
T  33192212 tttcataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataagttct-tcaaacagtctca 33192306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 39622017 - 39622052
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagt 201  Q
    |||||||||||||||||||||| |||||||||||||    
T  39622017 tgtcataagttgttttcataagttctctcaaacagt 39622052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 43808622 - 43808661
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  43808622 catgtcataagttattttcataagctctctcaaatagtct 43808661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 4550811 - 4550849
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  4550811 catgtcataagttgtttccataagctctcccaaacagtc 4550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 9477945 - 9477999
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtt 147  Q
    |||||| ||||| |||||||||||| ||||||| |||| ||||| ||||||||||    
T  9477945 tataagttataagttgttttcataagctatcctggagaggttatgaaaataagtt 9477999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 13234547 - 13234609
Alignment:
Q  141 ataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||| ||||||||||| || ||||||||||  ||||||  ||||| ||||||||||||||    
T  13234547 ataagttgaaaacaacttatggacatgtcataatgtgtttttgtaagcactctcaaacagtct 13234609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 13866942 - 13866984
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||    
T  13866942 catgtcataggttgttttcttaagttctctcaaacagtctcac 13866984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 28803536 - 28803494
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||| |||| | ||||||||||||||||||    
T  28803536 catgtcataagttgtttccatatgttctctcaaacagtctcac 28803494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 32106866 - 32106764
Alignment:
Q  103 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    |||||| ||||||||  ||||||  |||  |||| || |||| || |||||| ||||| |  |||||||||| |||||||||||| |||| |||||||||    
T  32106866 aaattgctttcataagttatcctgaagagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtc 32106767  T
Q  203 tca 205  Q
    |||    
T  32106766 tca 32106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 33941902 - 33941996
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    |||||| ||||| |||||||||||| ||||| | ||||  |||| | |||||||| ||| || |||| |  | ||||||||||||||||||||||    
T  33941902 tataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataag 33941996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 787381 - 787438
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||| |||| || ||||||||||| |||||||||||| |||| |||||||| ||||    
T  787381 aaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcac 787438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 1742038 - 1741997
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  1742038 catgtcataagttgtttccataagctctcccaaatagtctca 1741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 1939395 - 1939302
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    ||||||||||| |||| || ||||  ||||  ||||||||| |||||| |||| || |||||||||||||||| | | || |||||| ||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttattacaatctctctaaaacag 1939302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 7862824 - 7862865
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||    
T  7862824 catgttataagttgttttcgtaagctctctcgaacagtctca 7862865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 8017426 - 8017531
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||| |||| ||||||||||| ||||| | ||||| |||| |||||| |   ||||||| ||| |  ||| ||||||| |||||||||||| |||    
T  8017426 atataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttct 8017525  T
Q  192 ctcaaa 197  Q
    | ||||    
T  8017526 cccaaa 8017531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 9478348 - 9478401
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    |||||| |||| || ||||| ||||||||||| ||||| |||||||||||||||    
T  9478348 aaaacagcttatggacatgtaataagttgtttgcataaactctctcaaacagtc 9478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 9996771 - 9996844
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||| |||||||||| | ||||| ||| ||  ||||||||||||||||  |||||||||| ||| |||||||||    
T  9996771 ttatgaaaataagttgagaacaatttatgggtatgtcataagttgtttctataagctctcccaagcagtctcac 9996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 12140597 - 12140630
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaac 198  Q
    ||||||||||||||||||||||| ||||||||||    
T  12140597 atgtcataagttgttttcataagttctctcaaac 12140630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 16451184 - 16451225
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  16451184 atgtcataagttgttttcataagttctcccaaacggtctcac 16451225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 35379079 - 35378994
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||||| ||||| | ||||  |||| |||||||| | ||||||||||| |  || ||||| || |||||||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctc 35378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 3973609 - 3973645
Alignment:
Q  167 gtcataagttgttttcataagctctctcaaacagtct 203  Q
    |||||||||||||| |||| |||||||||||||||||    
T  3973609 gtcataagttgtttccatatgctctctcaaacagtct 3973645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 4350754 - 4350794
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    ||||||||||| |||||||||||| ||||||||||| ||||    
T  4350754 catgtcataagctgttttcataagttctctcaaacaatctc 4350794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 14451081 - 14451037
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttca 183  Q
    ||||||| | |||||| |||| |||||||||||||||||||||||    
T  14451081 aaataagctgaaaacagcttatggtcatgtcataagttgttttca 14451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 31096329 - 31096393
Alignment:
Q  128 agaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||| |||| ||||||||||||||||| |||| || ||||| || |  |||||||||||||||||    
T  31096329 agaacttatgaaaataagtttaaaacagcttatggacatgttattaactgttttcataagctctc 31096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 37474814 - 37474870
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||| | || ||| ||| |||| ||||||||||||||||||||| |||||||    
T  37474814 aaaacaactaatggacatatcacaagtagttttcataagctctctcaaagagtctca 37474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 43199407 - 43199439
Alignment:
Q  93 tataagctataaattgttttcataaactatcct 125  Q
    |||||||||||| ||||||||||||||||||||    
T  43199407 tataagctataagttgttttcataaactatcct 43199439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 43456738 - 43456674
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||| | ||||||  ||| || |||||||| ||||||||||| ||||||| |||||||||||    
T  43456738 aaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttcaaacagtct 43456674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 46082026 - 46082141
Alignment:
Q  92 atataagctataaattgttttcataaac--tatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 189  Q
    ||||||| ||||| ||||||||||| ||  ||| || ||||  |||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  46082026 atataagttataagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagct 46082125  T
Q  190 ctctcaaacagtctca 205  Q
    |||   ||||||||||    
T  46082126 ctcattaacagtctca 46082141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 34754887 - 34754775
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||  ||| |||||||||||||||||||| ||||  | ||  ||||||| | |||||||||||  | | ||||||||| ||||||| ||||||||    
T  34754887 atataagccgtaagttgttttcataaactatcct-gagagctgatggaaataagctgaaaacaacttataggcttgtcataagatgttttcttaagctct 34754789  T
Q  192 ctcaaacagtctca 205  Q
    ||||||||||||||    
T  34754788 ctcaaacagtctca 34754775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 48157205 - 48157084
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 184  Q
    ||||| |||||||||||||| ||||||||| || |||| |  ||||  ||||  ||||||| | |||||| |||| || |||| ||||||||||||  ||    
T  48157205 tgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctat 48157106  T
Q  185 aagctctctcaaacagtctcac 206  Q
    |||||||| |||||||||||||    
T  48157105 aagctctcccaaacagtctcac 48157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 25670673 - 25670550
Alignment:
Q  83 agtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttc 182  Q
    |||||||  ||||||||||| ||||||||| ||||  |||| | ||||  || | |||||||| | ||||||| |||    |||||||||||||||||||    
T  25670673 agtgttttcatataagctatcaattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttc 25670574  T
Q  183 ataagctctctcaaacagtctcac 206  Q
    ||||| | ||||||||||||||||    
T  25670573 ataagttttctcaaacagtctcac 25670550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 33894666 - 33894733
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| | ||||||||||| || ||||||||| | ||||||||||||||||| |||||||||||||    
T  33894666 aaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcac 33894733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 30496743 - 30496801
Alignment:
Q  138 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaa 196  Q
    |||||||| | |||||||||||||| |||| |||||| |||||||||||||||||||||    
T  30496743 aaaataagctgaaaacaacttacgggcatgccataagctgttttcataagctctctcaa 30496801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 38010706 - 38010820
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  ||||||||||| ||||||||||||| ||||  ||||||| | |||||| |||| |  ||||| ||  |||||||||||||   ||    
T  38010706 atataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcataaaaact 38010805  T
Q  192 ctcaaacagtctcac 206  Q
    |||||||| ||||||    
T  38010806 ctcaaacattctcac 38010820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 44151565 - 44151440
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcctagagaag-ttataaaaataagtttaaaacaacttacggtcatgtcat----aagttgtt 179  Q
    |||||| ||||||||||||| ||||||||||||||||| || || ||| ||||  ||||||| | |||||| |||| || ||||||||    || |||||    
T  44151565 tgtttccatataagctataagttgttttcataaactat-cttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataaaaaaattgtt 44151467  T
Q  180 ttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||||||| | ||||||    
T  44151466 ttcataagctctctcaaataatctcac 44151440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 33646035 - 33645924
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct- 193  Q
    ||||||||||| ||||||||||| ||||| | ||||  ||||  ||||||  | |||||||||||  | ||||||||||||||||| ||||||||||||     
T  33646035 taagctataaactgttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctctc 33645937  T
Q  194 caaacagtctcac 206  Q
    ||| |||||||||    
T  33645936 caaccagtctcac 33645924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 12242251 - 12242350
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||| ||||| |||||| || ||  |||| ||||||| | |||||||||||  | ||| |||||||  |||| |||||||||||||||||||||||||    
T  12242251 tgttttaataaattatcctggacaacgtatagaaataagctgaaaacaacttataggcatatcataagccgtttgcataagctctctcaaacagtctcac 12242350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 27626154 - 27626087
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||  ||| || ||||||||||| ||||| |||||||| ||||||||| ||||||    
T  27626154 aaataagtttaaaacagtttatggacatgtcataagctgtttccataagctttctcaaacaatctcac 27626087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 28727800 - 28727729
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    ||||| ||||||| | |||||||| ||||  |||||||||||  |||| |||||||||||||||||||||||    
T  28727800 ttatagaaataagctgaaaacaacatacgaacatgtcataagccgtttccataagctctctcaaacagtctc 28727729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 3610817 - 3610723
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    |||||||||||| |||||||| ||||||||||||||||  ||||| ||||||| | ||||   |||| || |||||||| || ||||| ||||||    
T  3610817 tataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaaaggcttatggacatgtcattagctgtttccataag 3610723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 22387902 - 22387860
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  22387902 catgccataagttgttttcataagctctcccaaacagtctcac 22387860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 34035919 - 34036005
Alignment:
Q  102 taaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataag 187  Q
    |||||||||||||||| ||||| ||||||| ||   |||||||||| ||||||||||| |  | |||||||||||| ||||||||||    
T  34035919 taaattgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataag 34036005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 36537957 - 36538014
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| |  ||||||||||||||||| |||||| ||||||||||| ||||||    
T  36537957 aaaacaacttatgaacatgtcataagttgtttccataagttctctcaaacaatctcac 36538014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 39907796 - 39907857
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaaca 154  Q
    ||||||||||||| ||||||||||||||||| ||||||| | || |||||||| | ||||||    
T  39907796 tataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaaca 39907857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 44615179 - 44615082
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||||| |||||||||||  || ||| ||||  ||||  ||||||  | |||||| |||  || |||||||||||||||||||||||||||||    
T  44615179 taagctataaactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctc 44615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 47427364 - 47427275
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 198  Q
    |||||||||||||| || ||||  ||| ||||||||| || ||| | ||||  |  |||||||||||||||| |||||||||||||||||    
T  47427364 ttttcataaactattcttgagagtttaaaaaaataagcttgaaatagcttatagagatgtcataagttgtttccataagctctctcaaac 47427275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 3468623 - 3468719
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||| ||||||||||||| || |  |||||||||  |||||||||| || |||||||| |||||||| ||  | |||||  |||||||||||    
T  3468623 ttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacatgtcattagttgtttccaacaactctccgaaacagtctca 3468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 5276240 - 5276332
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    ||||||||| ||||||| || || | || |||||||| | ||||||||| | |   |||||||||| ||||| ||||||||||||||||||||    
T  5276240 ttttcataagctatcctggaaaactaatgaaaataaggtgaaaacaactaatgaagatgtcataagatgtttgcataagctctctcaaacagt 5276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 23214920 - 23214960
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  23214920 atgtcataagttgttttcataaattctctcaaacagtctca 23214960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 206
Target Start/End: Complemental strand, 28691911 - 28691800
Alignment:
Q  94 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 193  Q
    ||||| |||| ||||||||||||| ||||||| ||||  |||| |||||||  | | ||||| ||| || || |||||||| |||||||||||| ||||     
T  28691911 ataagttatacattgttttcataagctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatctc- 28691813  T
Q  194 caaacagtctcac 206  Q
    | |||||||||||    
T  28691812 cgaacagtctcac 28691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 39360062 - 39360130
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 207  Q
    ||||||| | ||| ||||||| ||  |||||||||||||||| ||||| |||| |||||||||||||||    
T  39360062 aaataagctgaaagcaacttatggatatgtcataagttgtttccataaactctatcaaacagtctcacg 39360130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 6857369 - 6857310
Alignment:
Q  140 aataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    |||||||| ||||||||||| || |||| |||||| ||||| ||||||||||||| ||||    
T  6857369 aataagttgaaaacaacttatggacatggcataagctgtttccataagctctctcgaaca 6857310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 30535556 - 30535667
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||| ||||||  ||||| ||||| ||||| || ||||  ||| |||||||  | |||||| ||||||  ||| |||||||||||||||||||| ||||    
T  30535556 tataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctc 30535655  T
Q  193 tcaaacagtctc 204  Q
      ||||||||||    
T  30535656 caaaacagtctc 30535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 36598387 - 36598320
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| | |||||| |||| |  ||||||||||| ||||| |||||||||||||||||| ||||||    
T  36598387 aaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcac 36598320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 39542377 - 39542266
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||||| ||||| |||||| |||||  |||||| ||||  |||| |||||||||||   | |||| || | ||||||||||||| ||| |||||||||||    
T  39542377 tataagatataagttgtttccataagttatcctggagagcttatgaaaataagtttgttaaaactgacagacatgtcataagttatttccataagctctc 39542278  T
Q  193 tcaaacagtctc 204  Q
    | |||| |||||    
T  39542277 taaaactgtctc 39542266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 123
Target Start/End: Complemental strand, 39711484 - 39711453
Alignment:
Q  92 atataagctataaattgttttcataaactatc 123  Q
    ||||||||||||||||||||||||||||||||    
T  39711484 atataagctataaattgttttcataaactatc 39711453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 9038109 - 9038198
Alignment:
Q  97 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    ||||||||| ||||||||||||||||| | ||||| || | |||||||| | ||||||| ||| |  ||||||||||| |||||| |||||    
T  9038109 agctataaactgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataagctgtttttataag 9038198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 15740448 - 15740394
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    |||| |||||||||| |||||| |||| |  ||||||||||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 15740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 21453286 - 21453324
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagaga 130  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  21453286 atataagctataaactgttttcataagctatcctagaga 21453324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 24363671 - 24363601
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtca 170  Q
    ||||| |||||||||||| ||||||| |||| |||||  ||||||| | ||||||||||| || |||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 28340426 - 28340385
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  28340426 catgtcataagttgttttcataagctctc-ccaacagtctcac 28340385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 44808191 - 44808261
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    |||| |||||||| | ||||||  ||| || ||||||||||||| |||||||||| ||| |||||||||||    
T  44808191 ttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataaggtctatcaaacagtct 44808261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 44821952 - 44822018
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 159  Q
    |||||| |||||  ||||||||||| |||| || ||||| |||| |||||||||| |||||||||||    
T  44821952 tataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaactta 44822018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 47046172 - 47046134
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataa 144  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  47046172 ttgttttcataagctatcctagagaaattataaaaataa 47046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 4970792 - 4970755
Alignment:
Q  169 cataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcac 4970755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 17983769 - 17983838
Alignment:
Q  125 tagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    ||||||| ||||  |||||||||||||||||||||||| ||| |||||| | |||| ||| | |||||||    
T  17983769 tagagaacttattgaaataagtttaaaacaacttacggacatatcataaatcgtttccatcaactctctc 17983838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 20881710 - 20881661
Alignment:
Q  96 aagctataaattgttttcataaactatcctagagaagttataaaaataag 145  Q
    ||||||||| |||||||||||||||||| || |||| |||| ||||||||    
T  20881710 aagctataagttgttttcataaactatcttaaagaacttatgaaaataag 20881661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 25422390 - 25422431
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||    
T  25422390 catgtcataaggtgtttccataagctctcccaaacagtctca 25422431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 28844539 - 28844596
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| | || |||||||||||||||||||| ||||||||  ||||||| ||||    
T  28844539 aaaacaactgatggacatgtcataagttgttttcagaagctctcctaaacagtatcac 28844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 31003004 - 31003045
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    |||||||||||||||||| |||| || |||||||||||||||    
T  31003004 catgtcataagttgtttttataaactttctcaaacagtctca 31003045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 420427 - 420467
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||| ||||||||||||| |||| |||||||||||||    
T  420427 tgtcataaattgttttcataagttctcccaaacagtctcac 420467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 3804405 - 3804437
Alignment:
Q  170 ataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||||| |||||||||||||||    
T  3804405 ataagttgttttcataaactctctcaaacagtc 3804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 7244687 - 7244779
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||||||||| ||||  | ||||  |||| |||||||| | ||||||||||| |  |||||||||| |||||| ||| |||||| |||||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaaca 7244779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 28165076 - 28165196
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 184  Q
    ||||| ||||||||||||||| ||| || |||| ||||| | ||||  ||||  ||||||||| |||||| |||| |  || ||| | || ||||| |||    
T  28165076 tgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaacagcttatgaacaggtcttgagctgtttccat 28165175  T
Q  185 aagctctctcaaacagtctca 205  Q
    ||||| ||||||| |||||||    
T  28165176 aagctatctcaaagagtctca 28165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 31149705 - 31149737
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaa 197  Q
    |||||||||||| ||||||||||||||||||||    
T  31149705 atgtcataagttattttcataagctctctcaaa 31149737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 31167997 - 31168029
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaa 197  Q
    |||||||||||| ||||||||||||||||||||    
T  31167997 atgtcataagttattttcataagctctctcaaa 31168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 39967917 - 39968013
Alignment:
Q  97 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataagctctc 192  Q
    |||||||| |||||||||||| |||||  |||||| | || |||||||||| |||||| |||| |  | ||| |||||| |||||||||||| ||||    
T  39967917 agctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 30389091 - 30389206
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||   ||||||||||| || |||||||||| |||| |||||||| | ||||||||||| |  |||||||| || | |||||||| |||||    
T  30389091 atataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagctattttcatatgctct 30389190  T
Q  192 ctcaaacagtctcacg 207  Q
    |||||||||| |||||    
T  30389191 ctcaaacagtgtcacg 30389206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 39551283 - 39551173
Alignment:
Q  96 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 195  Q
    ||||||||| |||||||||||| || |||| ||||  ||||||||||||||| |||||| |||  || ||||||||||||||||| |||||  |||| ||    
T  39551283 aagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctccca 39551184  T
Q  196 aacagtctcac 206  Q
    |||||| ||||    
T  39551183 aacagtttcac 39551173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 8629489 - 8629562
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| | ||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||    
T  8629489 ttataaatagaagttgaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaacggtctcac 8629562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 14949875 - 14949972
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||| |||  ||||| ||||||| | |||||| |||| || ||||||||||||| |||||||||||||||  ||||||||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcac 14949972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 11569520 - 11569421
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| ||||| | ||||  || | |||||||| | ||||||||||| |  ||||||||||| ||||| |||||||||||| ||||||||||||    
T  11569520 tgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcac 11569421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 2091746 - 2091869
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcctagagaagt---tataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt 181  Q
    ||||| ||||||||||| || |||||||||||| ||||||| | ||||    |||| ||||||||| ||||||||||| ||  || ||||||||||||||    
T  2091746 tgttttaatataagctacaagttgttttcataagctatcct-gtgaagagcatatagaaataagttgaaaacaacttatggatatatcataagttgtttt 2091844  T
Q  182 cataagctctctcaaacagtctcac 206  Q
      | |||||||||||||| ||||||    
T  2091845 tgtgagctctctcaaacaatctcac 2091869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 26473816 - 26473730
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||||||||||| ||||||||||||  |||| |||||||||| |||  | ||||  | ||||||||||| |||||||||||||||||    
T  26473816 ttgttttcataagctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttttcataagctctc 26473730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 779132 - 779027
Alignment:
Q  99 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 198  Q
    ||||||| ||||||||||||||||| | ||||   ||  |||||||| | ||||||||||| |  ||||||||||||||||||| |||| ||| ||||||    
T  779132 ctataaactgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgttttcgtaagttctttcaaac 779033  T
Q  199 agtctc 204  Q
    | ||||    
T  779032 aatctc 779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 30918177 - 30918218
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  30918177 atgtcacaagttgttttcataagctctctcaaacagtctcac 30918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 7918510 - 7918412
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    |||||||| ||| ||||| | ||||  ||||  |||||||||  ||||| |||| |  |||||| |||||||||||||||||||||| |||||||||||    
T  7918510 ttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagtctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 9541057 - 9540967
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||||||| ||||||||||||  || | |||||||| | || |||| ||| || ||||||||||| ||||| ||||||||||| ||||||    
T  9541057 ttttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataagatgtttccataagctctcccaaaca 9540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 11771048 - 11770978
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||||||||||| |||||||| ||  | ||| |||||||||||||||||||| ||| | |||||||||    
T  11771048 ttataaaaataagttgaaaacaacgtatagacatatcataagttgttttcataagttcttttaaacagtct 11770978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 30987997 - 30987955
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  30987997 catgtcataagttgtttccataagctctctcaaacagactcac 30987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 40071741 - 40071855
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||| |||||||| |||||||| || |||||||||| |  |||| ||||| |||| ||| |   ||| |  ||||||||||||||||| ||||||||||    
T  40071741 atatatgctataaactgttttcagaagctatcctagaaagcttatgaaaattagttgaaagctgattatgaacatgtcataagttgtttccataagctct 40071840  T
Q  192 ctcaaacagtctcac 206  Q
    | |||||| ||||||    
T  40071841 cccaaacactctcac 40071855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 9700034 - 9700107
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||| |||||||| | |||||| |||| || |||||||||| ||| ||||| ||||||||||||| ||||||||    
T  9700034 ttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcac 9700107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 31875632 - 31875559
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||| |||||||||| ||||   |||| || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  31875632 ttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagctttctcaaacagtgtcac 31875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 6509381 - 6509273
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  ||||||||||| ||||||| ||||  ||||  ||||||| | |||| |  |||  | ||||||||||| |||||  |||||||||    
T  6509381 atataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctct 6509282  T
Q  192 ctcaaacag 200  Q
    |||||||||    
T  6509281 ctcaaacag 6509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 7918781 - 7918745
Alignment:
Q  170 ataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcac 7918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 9572919 - 9572975
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||| || ||||||||||||| ||||| |||| |||| ||||||||||||    
T  9572919 aaaacaacttatggacatgtcataagttattttcgtaagttctcacaaacagtctca 9572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 12851171 - 12851279
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    ||||||| ||||||||||||||| || |||| ||||  |||| ||||||||   |||||| |||| |  ||||| ||||| |||||||||||| | || |    
T  12851171 taagctagaaattgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttccc 12851270  T
Q  195 aaacagtct 203  Q
    |||||||||    
T  12851271 aaacagtct 12851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 6950361 - 6950428
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| | |||||||||||  | ||||||||| ||||||| ||||||||||| |||||| ||||||    
T  6950361 aaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcac 6950428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 30191147 - 30191108
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  30191147 catgtcataagttgtttccataagctctcccaaacagtct 30191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 32840990 - 32840951
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  32840990 atgtcataagttgttttcataagttctcccaaacagtctc 32840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 2488014 - 2487972
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  2488014 catgttataagttgttttcataagttctcccaaacagtctcac 2487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 4251020 - 4251062
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||  |||||||||| |||||||||||||||||||    
T  4251020 catgtcataagcagttttcataaactctctcaaacagtctcac 4251062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 8060676 - 8060770
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    ||||||||||| | ||||||||||  ||||  ||||||| | |||| |||||| |  | |  ||||| |||||||||||||||||||||||||||    
T  8060676 tgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaactttccataatttgttttcataagctctctcaaacagt 8060770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 31862486 - 31862595
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||||||  |||||||||||  |||||||||||  |||| |||||||| | |||||| |||| |   | ||||||||||| || | ||| |||||    
T  31862486 tataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagttgcttccgtaa-ctctc 31862584  T
Q  193 tcaaacagtct 203  Q
    |||||||||||    
T  31862585 tcaaacagtct 31862595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 41442459 - 41442417
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  41442459 catgtcataaattgttttcataagttctgtcaaacagtctcac 41442417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 10120822 - 10120859
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtc 202  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  10120822 atgtcataagctgttttcataagttctctcaaacagtc 10120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 11056667 - 11056630
Alignment:
Q  169 cataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  11056667 cataagttgttttcataaactctctcaaacaatctcac 11056630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 26371014 - 26371067
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||| |||  |||||||||||| |||| |||||| ||||||||||||||    
T  26371014 aaaacaactgacgcacatgtcataagtagtttccataagatctctcaaacagtc 26371067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 197
Target Start/End: Complemental strand, 27412884 - 27412855
Alignment:
Q  168 tcataagttgttttcataagctctctcaaa 197  Q
    ||||||||||||||||||||||||||||||    
T  27412884 tcataagttgttttcataagctctctcaaa 27412855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 35220791 - 35220702
Alignment:
Q  102 taaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||| ||||||||||| |||| || ||||  ||||||||||||| | |||| | |||| || ||||||||||  ||||||||||| ||||    
T  35220791 taaactgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgggcatgtcataaactgttttcataaactct 35220702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 5069761 - 5069805
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcacgt 208  Q
    ||||| ||||| ||||| |||||||||||||||||||||| ||||    
T  5069761 catgttataagatgtttccataagctctctcaaacagtcttacgt 5069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 21130609 - 21130718
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    |||| ||||| ||||| |||||||||||| | ||||  ||||  ||||||| | |||||| | |  || ||||||| ||| | ||| |||||||||||||    
T  21130609 taagatataagttgttctcataaactatcattgagagcttatggaaataagctcaaaacagcat--ggacatgtcaaaagctatttccataagctctctc 21130706  T
Q  195 aaacagtctcac 206  Q
    ||||||||||||    
T  21130707 aaacagtctcac 21130718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 26771332 - 26771372
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  26771332 tgtcataagctgttttcataagttctcccaaacagtctcac 26771372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 31915297 - 31915257
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  31915297 tgtcataagttgtttgtataagctttctcaaacagtctcac 31915257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 35534616 - 35534576
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||| ||| ||||||||||||||||||    
T  35534616 tgtcataagctgttttcacaagttctctcaaacagtctcac 35534576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 45071438 - 45071466
Alignment:
Q  164 catgtcataagttgttttcataagctctc 192  Q
    |||||||||||||||||||||||||||||    
T  45071438 catgtcataagttgttttcataagctctc 45071466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 2460182 - 2460115
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||    
T  2460182 aaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcac 2460115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 4006706 - 4006822
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| |||||||||||| ||||||  |||| ||||| |||||||| | |||| |||||| || ||| || ||||||||||||| |||||||    
T  4006706 atataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacatatcgtaagttgttttcacaagctct 4006805  T
Q  192 ctcaaacagtctcacgt 208  Q
      |||| ||| ||||||    
T  4006806 tccaaagagtttcacgt 4006822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 281926 - 281812
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  ||| ||||||| ||||||||||||  | ||  ||||||| | |||||||||||  | |||||||||||||| || ||| ||||||    
T  281926 atataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctct 281827  T
Q  192 ctcaaacagtctcac 206  Q
    | |||||||||||||    
T  281826 cccaaacagtctcac 281812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 34939526 - 34939612
Alignment:
Q  113 cataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||| |||||||  ||| |||||  ||||||| | |||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaaca 34939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 8035226 - 8035114
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||| || ||||||||||||  ||||||||| |  |||  |||||||||| ||||||| ||| |  ||||||||||||||||||| |||| |||    
T  8035226 atataagctagaagttgttttcataagttatcctagaaagcttacgaaaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttct 8035127  T
Q  192 ctcaaacagtctc 204  Q
    | |||| ||||||    
T  8035126 cccaaatagtctc 8035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 8348275 - 8348327
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  8348275 aaaacaacttatggtcatgttataagttgttttcgtaagctctctcaaacagt 8348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 10616578 - 10616514
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 197  Q
    ||||||||||||| | || ||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  10616578 ttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaa 10616514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 33500501 - 33500443
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 207  Q
    ||||||||||| |  |||||||||| |||||||||||||||| ||||||||||||||||    
T  33500501 aaaacaacttatgcacatgtcataaattgttttcataagctccctcaaacagtctcacg 33500443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 30523652 - 30523751
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| || ||||||||| ||||||| |||| |||||| |||| |||| |||||| |||| |  |||| |||||||||||| |||||| |||    
T  30523652 atataagctataagtt-ttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccataagatct 30523750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 31624085 - 31624177
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    ||||||||||  ||||||||||  ||||| | ||||| |||| |||||||||| |||||| |||| |  ||||||||||| ||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataag 31624177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 32578017 - 32577957
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||||| | |||||| || | || ||||||||||||||||||||||||||||||||||||    
T  32578017 aaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaaca 32577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 9027611 - 9027678
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    |||| |||||||| | ||||||||||| || ||||||||||||| ||| |||||||||| ||||||||    
T  9027611 ttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctctttcaaacag 9027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 20368250 - 20368147
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||| |||||||||||| || || | ||||| |||| |||||||||| |||  | |||| |  |||||||||||||||||||||||| |||| |||| |    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaata 20368151  T
Q  200 gtct 203  Q
    ||||    
T  20368150 gtct 20368147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 10476196 - 10476087
Alignment:
Q  95 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    |||||| ||| |||||||||||| ||||| | |||| | |||| ||||||| | ||||||| |||||  |||||||| || ||||| |||||||||||      
T  10476196 taagctgtaagttgttttcataagctatcttggaga-gctatagaaataagctgaaaacaatttacgagcatgtcattagatgtttccataagctctcat 10476098  T
Q  195 aaacagtctca 205  Q
    |||||||||||    
T  10476097 aaacagtctca 10476087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 32171387 - 32171349
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  32171387 tgtcataagctgttttcataagctctctcaaacagtctc 32171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 32917261 - 32917303
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  32917261 catgtcataagttgtttccataagctctcccaaacagtctcac 32917303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 4246402 - 4246507
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||| ||||||  ||||||||||| ||||  | ||||   |||||||||||||| |||||| |||| || |||||||| |||||||| || ||||||     
T  4246402 atataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgtttccaaaagctca 4246501  T
Q  192 ctcaaa 197  Q
    ||||||    
T  4246502 ctcaaa 4246507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 7931790 - 7931705
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||| || |||||||| |||  |||   ||||||| | ||||||||||| |  ||||||||||||||||||||||||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctct 7931705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 27857423 - 27857464
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  27857423 atgtcataagttgttttcataagctctcccaaacagtttcac 27857464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 725667 - 725631
Alignment:
Q  158 tacggtcatgtcataagttgttttcataagctctctc 194  Q
    ||||| |||||||||||||||||||||||||||||||    
T  725667 tacggacatgtcataagttgttttcataagctctctc 725631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 2112192 - 2112280
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 180  Q
    |||||| |||||| |||||||||||||||||| |||||   ||||| ||||||    ||||||||||| |  |||||||||||||||||    
T  2112192 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 2112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 33832318 - 33832238
Alignment:
Q  125 tagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    |||||||  ||| |||||||| | |||||||||||    |||||||||||||||||||||||| ||||| |||||| ||||    
T  33832318 tagagaatatatgaaaataagctaaaaacaacttataaacatgtcataagttgttttcataagttctcttaaacagactca 33832238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 7485137 - 7485102
Alignment:
Q  170 ataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7485137 ataagttgttttcataagctctctcaaacagcctca 7485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 10031771 - 10031838
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| | ||||||||||| ||  ||||| ||||||| ||||||| ||||| ||||||||||||||    
T  10031771 aaataagatgaaaacaacttatggatatgtcgtaagttggtttcataggctctttcaaacagtctcac 10031838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 20377941 - 20377898
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||||||||||  | |||||||||||||||||||||||||||||    
T  20377941 aaaacaacttatagacatgtcataagttgttttcataagctctc 20377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 1575928 - 1575982
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    |||| |||||||||| |||||| |||| |  ||||||||||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 1575982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 2727934 - 2727896
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagaga 130  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  2727934 atataagctataagttgttttcataagctatcctagaga 2727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 4080955 - 4081013
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 197  Q
    ||||||||| ||||||||||| |  |||| ||||||||||||||||||  |||||||||    
T  4080955 aaataagttgaaaacaacttatgaacatggcataagttgttttcataaaatctctcaaa 4081013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 4324516 - 4324423
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    ||||||||||| ||||||| || || ||||  ||||||| | ||| ||  ||| || |||||||||||||||||| ||||| |||||||||||||    
T  4324516 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttgtttt-ataagttctctcaaacagt 4324423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 5566208 - 5566150
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 197  Q
    ||||||||| ||||||||||| || ||||| ||||| ||||||||| ||||||| ||||    
T  5566208 aaataagttgaaaacaacttatggacatgtaataagctgttttcattagctctcacaaa 5566150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 30863295 - 30863337
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||| |  ||||||||||||||||||||||||||||    
T  30863295 aaaacaacttatgtacatgtcataagttgttttcataagctct 30863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 33116648 - 33116690
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||||||||||||  || |||||||||||||||    
T  33116648 catgtcataagttgttttcataaattccctcaaacagtctcac 33116690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 781371 - 781472
Alignment:
Q  91 aatataagctataaattgttttcataaactatccta-gagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 189  Q
    ||||||||||||||  | |||||||||| |||| || ||||  ||||| ||||| | | ||||||  | |||| |||||||||| |||||||||||||||    
T  781371 aatataagctataagcttttttcataaattatcttaagagagcttatagaaatatgctgaaaacagttgacggacatgtcataatttgttttcataagct 781470  T
Q  190 ct 191  Q
    ||    
T  781471 ct 781472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 2263256 - 2263293
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagt 201  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  2263256 catgtcatatgttgttttcataagttctctcaaacagt 2263293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 3528811 - 3528884
Alignment:
Q  108 gttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt 181  Q
    |||||||| ||||||| | ||||  |||| |||||||| | ||||||| ||| || ||||||||||||||||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgtttt 3528884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 5731618 - 5731675
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||| ||| ||||||| | ||||||||||||||  |||||| ||||||    
T  5731618 aaaacaacttacggacatatcataagctattttcataagctctaccaaacactctcac 5731675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 20671942 - 20671905
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagaga 130  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  20671942 tataagctttaaattgttttcataaactatcatagaga 20671905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 31338040 - 31338073
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaa 197  Q
    ||||||||||||||||||||||||||||| ||||    
T  31338040 catgtcataagttgttttcataagctctcacaaa 31338073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 31594405 - 31594356
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 198  Q
    ||||||| ||| || ||||||||||||||||| ||||| |||||||||||    
T  31594405 aaaacaaattaaggacatgtcataagttgtttccataacctctctcaaac 31594356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 31671152 - 31671087
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaact 157  Q
    |||||||||||||  ||||||| |||||||||||||| |  |||| |||||||| | |||||||||    
T  31671152 atataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaacaact 31671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 33498683 - 33498724
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||||||||||||||  |||| |||||||    
T  33498683 catgtcataagttgttttcataagctctaccaaaaagtctca 33498724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 1669804 - 1669776
Alignment:
Q  164 catgtcataagttgttttcataagctctc 192  Q
    |||||||||||||||||||||||||||||    
T  1669804 catgtcataagttgttttcataagctctc 1669776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 2027804 - 2027764
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    |||||||||||||||||  |||||||||| |||||||||||    
T  2027804 catgtcataagttgtttctataagctctcccaaacagtctc 2027764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 2455683 - 2455719
Alignment:
Q  170 ataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  2455683 ataagttgtttccataagctctttcaaacagtctcac 2455719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 6310256 - 6310228
Alignment:
Q  164 catgtcataagttgttttcataagctctc 192  Q
    |||||||||||||||||||||||||||||    
T  6310256 catgtcataagttgttttcataagctctc 6310228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 9559543 - 9559503
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  9559543 atgtcataagttgttttcataagttctcccaaatagtctca 9559503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 30604935 - 30604995
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||||||| |||| |||||| |  ||| ||||| |||||||| |||||||||||||||||    
T  30604935 aaataagttgaaaagaacttatgaacatttcataggttgttttaataagctctctcaaaca 30604995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 7218199 - 7218039
Alignment:
Q  46 ataagctatttccataatgaaatataaaaataaagtcag--tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaata 143  Q
    |||| ||||||||||||| |||  ||||| ||||||||   |||||  ||||||||||||| |||||||||||| ||||||| ||||| |||| ||||||    
T  7218199 ataatctatttccataataaaaggtaaaa-taaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaata 7218101  T
Q  144 agtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    |||| |||||| |||  |  | |||||||||| ||||||| |||||| | |||||| |||||    
T  7218100 agttgaaaacagcttgtgaacgtgtcataagtcgttttcacaagctcccccaaacaatctca 7218039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 25005875 - 25005765
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggt--catgtcataagttgttttcataagct 189  Q
    ||||||||||||| |||||||||||| ||||||| ||||  ||||||||| ||| |||||| | |||||  |   | |||||||||||||||||||||||    
T  25005875 atataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatcttactatagaaagtcataagttgttttcataagct 25005776  T
Q  190 ctctcaaacag 200  Q
    ||| |||||||    
T  25005775 ctcccaaacag 25005765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 38867909 - 38867799
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||| |||| |||||||||||  |||| |  |||| |||| |||||||| | ||||||||| | || ||| ||||||||| ||| ||||||||||    
T  38867909 atataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatcataagttatttccataagctct 38867810  T
Q  192 ctcaaacagtc 202  Q
    |||||||||||    
T  38867809 ctcaaacagtc 38867799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 25479573 - 25479686
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||| ||||||| |||||||||||| ||||||||||||  |||| |||||||| | ||||||||| | |  ||||||||||  | |||||||||||||     
T  25479573 atataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataagctca 25479672  T
Q  192 ctcaaacagtctca 205  Q
    | |||| |||||||    
T  25479673 cacaaatagtctca 25479686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 4868439 - 4868505
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||  | |||||||||||||| |||||||| |||||||||||||||||||    
T  4868439 aaataagttgaaaacaacttattgacatgtcataagttg-tttcataaactctctcaaacagtctcac 4868505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 17420195 - 17420294
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||| ||||||| ||| |||||  ||| || | ||  ||||||||| ||||||| ||| || ||||| ||||||||||||||||||||||    
T  17420195 atataagctataaactgttttcgtaagctatctcagaaaactaatggaaataagttgaaaacaatttatggacatgtaataagttgttttcataagctct 17420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 27887201 - 27887114
Alignment:
Q  87 tttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataag 174  Q
    |||| ||||||||||||| |||||||||||||||||| | ||||   |||||||||||| | ||||||| ||| || |||||||||||    
T  27887201 tttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtcataag 27887114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 11639486 - 11639395
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||| ||||| |||||  ||| |||||||  |||| |||||||| | |||||| |||| || ||||||||||| ||||||||||||||||    
T  11639486 tataaactgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataagctct 11639395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 32515500 - 32515405
Alignment:
Q  111 ttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| ||||| | ||||  ||||| | ||||||| |||||||||||  | ||||||||| | ||||| ||||||||||| |||||||||||||    
T  32515500 ttcataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcac 32515405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 3224415 - 3224529
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||   |||||| |||| |||| |||||||| |||| |||||||| | | ||||||||| || |||||||||||| ||||  ||||  |||    
T  3224415 atataagctatagggtgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacatgtcataagtagtttgtataaattct 3224514  T
Q  192 ctcaaacagtctcac 206  Q
    |||||| ||| ||||    
T  3224515 ctcaaatagtgtcac 3224529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 4548759 - 4548821
Alignment:
Q  138 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    |||||||| | |||||||||||| | ||||||||||||||||| ||| || ||||||||||||    
T  4548759 aaaataagctaaaaacaacttacaggcatgtcataagttgtttccattaggtctctcaaacag 4548821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 4699676 - 4699598
Alignment:
Q  109 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    ||||||||||||||||  ||||  ||||| ||||||| | |||||| |||| |  ||||||||||||||||||||||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataag 4699598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 6262777 - 6262835
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 197  Q
    ||||||| ||||||||||||| || ||| ||||||||| ||||||||||||||| ||||    
T  6262777 aaataagcttaaaacaacttatggacatatcataagttattttcataagctctcccaaa 6262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 29045990 - 29045896
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataa 186  Q
    ||||||||||||| |||||||||||| || |||| ||||  | ||  || || ||| ||| ||||||| || |||||||||||||||||||||||    
T  29045990 atataagctataagttgttttcataagctgtcctggagagatgatggaagtacgttaaaagcaacttatggacatgtcataagttgttttcataa 29045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 31517818 - 31517704
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  ||| ||||||| || || | ||||  |||| |||||||| | |||||| |||| |  |||||||| ||||||||| ||||| |||    
T  31517818 atataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttct 31517719  T
Q  192 ctcaaacagtctcac 206  Q
    | |||||||||||||    
T  31517718 cccaaacagtctcac 31517704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 35351036 - 35351098
Alignment:
Q  97 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 159  Q
    |||||||| |||| ||||||||||||||||||||  ||| ||||||||| | |||||||||||    
T  35351036 agctataagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaactta 35351098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 5591970 - 5591933
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  5591970 tgtcataagctgttttcataagctctctcaaacagtct 5591933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 30257668 - 30257789
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 184  Q
    |||||| ||||||||| ||| |||||||||||||||||||| |||   ||||| ||||||| | |||||| |||| |  ||||||||||    |||| ||    
T  30257668 tgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataaaagatttttat 30257767  T
Q  185 aagctctctcaaacagtctcac 206  Q
    ||||||||  ||| ||||||||    
T  30257768 aagctctcctaaatagtctcac 30257789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 33186027 - 33185927
Alignment:
Q  100 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||| ||||||| |||| ||||||||||||  | ||  ||||||||| ||||||  ||| ||  ||||||||| |||||||||||| ||||||||||||    
T  33186027 tataagttgtttttataagctatcctagagatat-atgtaaataagttgaaaacaggttatggaaatgtcataatttgttttcataaactctctcaaaca 33185929  T
Q  200 gt 201  Q
    ||    
T  33185928 gt 33185927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 37842431 - 37842338
Alignment:
Q  94 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    ||||||||||| |||||||||||| ||||| |  |||| ||||||||||||| | |||||  |||| |  |||||||| || ||||||||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttttcataag 37842338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 38170711 - 38170654
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| |  ||||||||||| ||||||||||||||||| ||| |||||||||    
T  38170711 aaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtctcac 38170654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 42336664 - 42336717
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||  || |||||||||||||||||||||||| | ||||||||||||    
T  42336664 aaaacaacttttggacatgtcataagttgttttcataagttatctcaaacagtc 42336717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 1432508 - 1432560
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 145  Q
    ||||||||||||||||||||||||||||||| | ||||| |||| ||| ||||    
T  1432508 tataagctataaattgttttcataaactatcttggagaacttatgaaagtaag 1432560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 4700143 - 4700079
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaact 157  Q
    ||||||||||||| |||||| |||||||||||| ||||  |||| |||||||| | |||||||||    
T  4700143 tataagctataaactgtttttataaactatcctggagagcttatgaaaataagctgaaaacaact 4700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 8780430 - 8780394
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacag 200  Q
    |||||||||||||||||| ||||||||||||||||||    
T  8780430 catgtcataagttgtttttataagctctctcaaacag 8780394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 11695855 - 11695967
Alignment:
Q  94 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 193  Q
    |||||||||||| |||||| ||| ||||| || || |  |||| |||||||||| |||||| |||| || ||||||||||  ||||| |||| ||| ||     
T  11695855 ataagctataaaatgtttttatagactattctggaaagcttatgaaaataagttgaaaacagcttatggacatgtcataaactgtttccatatgctttcc 11695954  T
Q  194 caaacagtctcac 206  Q
    |||||| ||||||    
T  11695955 caaacaatctcac 11695967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 15579533 - 15579585
Alignment:
Q  151 aacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||||||||| || ||||||||||||||||| || |||||||| ||||||||||    
T  15579533 aacaacttatggacatgtcataagttgtttccacaagctctcccaaacagtct 15579585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 28689532 - 28689421
Alignment:
Q  92 atataagctataaattgttttcataaa--ctatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 189  Q
    ||||||||||||| ||||||||||| |  ||||| | || |  |||| |||||||| | ||||||||||| || ||||||||||| ||||| | |||| |    
T  28689532 atataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagtt 28689433  T
Q  190 ctctcaaacagt 201  Q
    |||| |||||||    
T  28689432 ctctaaaacagt 28689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 33108653 - 33108605
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 187  Q
    ||||||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  33108653 aaataagttgaaaacaacttatggtcatggcatgagttgttttcataag 33108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 36151582 - 36151502
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataa 173  Q
    |||||| |||||||||||||| ||||| ||||||| ||  |||| |||||||||| ||||||  ||| || ||||||||||    
T  36151582 tataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaataagttgaaaacaggttatggacatgtcataa 36151502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 39270503 - 39270403
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||| |||||  ||||||||||| ||| | ||||||   ||| |||||||||| |||||| |||| || |||| || ||| ||||||||||||||||    
T  39270503 atataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataagctct 39270404  T
Q  192 c 192  Q
    |    
T  39270403 c 39270403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 43371891 - 43371855
Alignment:
Q  170 ataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||| |||||||||||||||||||||||||||||||    
T  43371891 ataagctgttttcataagctctctcaaacagtctcac 43371855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 4034020 - 4033981
Alignment:
Q  167 gtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4034020 gtcataagttattttcataagctctctcaaacaatctcac 4033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 4481968 - 4482031
Alignment:
Q  138 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    |||||||| | |||||| |||| |  ||||| |||||||||||||||||| |||||||||||||    
T  4481968 aaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 4482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 6279392 - 6279499
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||||||| |||| | ||||||||| ||||||||||||  ||||  ||||| | | ||||||||||| || |||||  | |  ||||| |||||||||||    
T  6279392 tataagctttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgtggttaactgtttccataagctctc 6279491  T
Q  193 tcaaacag 200  Q
    ||||||||    
T  6279492 tcaaacag 6279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 10744308 - 10744399
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 198  Q
    ||||||||||| || || ||||||| ||||||||||||| | |||||| |||| |  |||| |||||| |||||||| ||| |||| |||||    
T  10744308 tgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttcacaagttctcccaaac 10744399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 35668963 - 35669075
Alignment:
Q  91 aatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 190  Q
    ||||||| ||||||| |||||||||||  ||||||  | || ||||  ||||||||| ||||||| ||| || ||| ||||||| || |||||||||       
T  35668963 aatataaactataaactgttttcataacttatcctgtaaaatttatggaaataagttgaaaacaatttatggacatatcataagctgctttcataag--t 35669060  T
Q  191 tctcaaacagtctca 205  Q
    |||||||||||||||    
T  35669061 tctcaaacagtctca 35669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 2522636 - 2522698
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtc 169  Q
    |||||||||||||||| || ||||| ||||  ||||||||| ||||||| |||||| ||||||    
T  2522636 tgttttcataaactattctggagaatttatggaaataagttgaaaacaaattacggacatgtc 2522698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 4549616 - 4549506
Alignment:
Q  96 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactt-acggtcatgtcataagttgttttcataagctctctc 194  Q
    |||||||||  ||||||||||| | ||||| ||||  ||||  ||||  ||| |||||||||| |  | |||||||||||||||||  |||||||||| |    
T  4549616 aagctataagatgttttcataagcaatcctggagagcttattgaaatttgttgaaaacaactttatagacatgtcataagttgtttctataagctctccc 4549517  T
Q  195 aaacagtctca 205  Q
    |||||||||||    
T  4549516 aaacagtctca 4549506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 17269242 - 17269356
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||| |||| |||||||||||| ||||||| ||||  |||    |||||||| ||||||||| | |  ||||||||||| | ||||||||||| ||    
T  17269242 atataagcaataagttgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtcataaggtattttcataagcact 17269341  T
Q  192 ctcaaacagtctcac 206  Q
      |||||| ||||||    
T  17269342 accaaacaatctcac 17269356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 26779996 - 26779891
Alignment:
Q  99 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 198  Q
    |||||| |||||||||||| ||||| |  |||| |||| |||||||||| |||||||||||  ||   |||||||| |||||||| ||  |||| |||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaactta-tgtacggtcataaggtgttttcagaaattctcccaaac 26779898  T
Q  199 agtctca 205  Q
    |||||||    
T  26779897 agtctca 26779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 34536222 - 34536264
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| |||||||||||||  ||||||||||||||||    
T  34536222 catgtcataagctgttttcataagccatctcaaacagtctcac 34536264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 45234247 - 45234289
Alignment:
Q  154 aacttacggtcatgtcataagttgttttcataagctctctcaa 196  Q
    |||||| || ||||||||||||||||||||||| |||||||||    
T  45234247 aacttaagggcatgtcataagttgttttcataaactctctcaa 45234289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 49692058 - 49692016
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| | |||||||||| ||||||||||||||||||    
T  49692058 catgtcataagctattttcataagttctctcaaacagtctcac 49692016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 16980868 - 16980909
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||| |||||||||| |||||||||||||||| ||||||||    
T  16980868 atgtcgtaagttgtttccataagctctctcaaatagtctcac 16980909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 26946525 - 26946472
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataag 145  Q
    ||||||||||||| | |||||||||| ||||| ||||||||| || ||||||||    
T  26946525 atataagctataagtcgttttcataagctatcttagagaagtcatgaaaataag 26946472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 27963434 - 27963341
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    |||||||||||| ||||  | ||||  ||||| ||||||| | ||||||||||| || ||||||||||| ||||   ||||||| |||||||||    
T  27963434 ttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgttaatataagctttctcaaaca 27963341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 29929642 - 29929585
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| |  |||||||| ||||||||||||||||||||  ||||||| ||||    
T  29929642 aaaacaacttatgcacatgtcatgagttgttttcataagctctccaaaacagtatcac 29929585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 37942004 - 37941955
Alignment:
Q  151 aacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 200  Q
    ||||||||| || |||||||||| ||||||  ||||||||||||||||||    
T  37942004 aacaacttatggacatgtcataaattgtttctataagctctctcaaacag 37941955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 38001645 - 38001702
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| |  || |||||||| |||||||||||| |||| |||||||||||||    
T  38001645 aaaacaacttatgaacaggtcataagctgttttcataagttctcccaaacagtctcac 38001702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 43722365 - 43722308
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 190  Q
    ||||||||||||| | |||||||| || |  ||||||||||||| |||||||||||||    
T  43722365 ttataaaaataagctgaaaacaacataagaacatgtcataagtttttttcataagctc 43722308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 44422691 - 44422804
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  | |||| |||| ||||||| ||||  |||| |||||||| |  |  || |||| || ||||||||||| | ||||||||||||||    
T  44422691 atataagctataagctatttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataagctct 44422790  T
Q  192 ctcaaacagtctca 205  Q
    | || |||||||||    
T  44422791 cccagacagtctca 44422804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 49521811 - 49521770
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||||||||||| || ||||||||||||||| |||||    
T  49521811 catgtcataagttgtttccacaagctctctcaaacaatctca 49521770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 2295163 - 2295203
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  2295163 tgtcataagctgttttcataagttctcccaaacagtctcac 2295203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 4200304 - 4200340
Alignment:
Q  170 ataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  4200304 ataagttgttttcattagctctcacaaacagtctcac 4200340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 7356544 - 7356504
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    |||||||||||||||||| |||| |||||||||||| ||||    
T  7356544 catgtcataagttgtttttataaactctctcaaacaatctc 7356504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 15558224 - 15558276
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 159  Q
    |||||||||||  |||||||||||| ||||| ||||||| | |||||||||||    
T  15558224 tgttttcataagatatcctagagaacttatagaaataagctgaaaacaactta 15558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 24153320 - 24153380
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 199  Q
    ||||||||| ||||||||| | ||  ||||||||||||||||  |||||||||| ||||||    
T  24153320 aaataagttaaaaacaactcatggatatgtcataagttgtttctataagctctcacaaaca 24153380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 34179957 - 34179917
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcct 125  Q
    ||||| ||| ||||||||||| |||||||||||||||||||    
T  34179957 tgttttaatctaagctataaactgttttcataaactatcct 34179917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 49888760 - 49888812
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 145  Q
    |||||||||| | |||||||||||| ||||| ||||||| |||| ||||||||    
T  49888760 tataagctattagttgttttcataagctatcttagagaacttatgaaaataag 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 50644258 - 50644218
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  50644258 tgtcgtaagttgttttcataagttctcccaaacagtctcac 50644218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 10272508 - 10272399
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||||||||||| |||||||||||| | ||| | ||||  |||| |||||||| | |||||||||||| | |||||||||||||||||  |||||| |||    
T  10272508 tataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgtttctataagcactc 10272409  T
Q  193 tcaaacagtc 202  Q
     |||| ||||    
T  10272408 ccaaatagtc 10272399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 4619692 - 4619808
Alignment:
Q  85 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 184  Q
    |||||| |||||| ||||||| ||| ||||||| ||||| | ||||| ||||  ||||||| | ||| || |||| |  |||||||| ||||||||||||    
T  4619692 tgtttctatataatctataaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcat 4619791  T
Q  185 aagctctctcaaacagt 201  Q
    |||||||| ||||||||    
T  4619792 aagctctcccaaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 41957514 - 41957430
Alignment:
Q  107 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||| ||||||| ||||| |||| |||||||| | ||||||||||| || ||||||||||| ||||| | ||||||||    
T  41957514 tgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctct 41957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 37611282 - 37611179
Alignment:
Q  103 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||| ||||| | ||||  ||||  ||||||  | |||||| |||| |  ||||||| |||||||||||||||||||||||||||| ||    
T  37611282 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37611183  T
Q  203 tcac 206  Q
    ||||    
T  37611182 tcac 37611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 37788012 - 37787909
Alignment:
Q  103 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||| ||||| | ||||  ||||  ||||||  | |||||| |||| |  ||||||| |||||||||||||||||||||||||||| ||    
T  37788012 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37787913  T
Q  203 tcac 206  Q
    ||||    
T  37787912 tcac 37787909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 37526277 - 37526163
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| ||||||||||||  | | || ||||  ||||  ||||||| | |||||| ||||    ||||||||| ||||| ||||||||||||    
T  37526277 atataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctct 37526178  T
Q  192 ctcaaacagtctcac 206  Q
    |||||||||||||||    
T  37526177 ctcaaacagtctcac 37526163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 37588438 - 37588324
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    ||||||||||||| ||||||||||||  ||| || ||||  ||||  ||||||| | |||||| ||||    ||| ||||| ||||| ||||||||||||    
T  37588438 atataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcataggttgtattcataagctct 37588339  T
Q  192 ctcaaacagtctcac 206  Q
    |||||||||||||||    
T  37588338 ctcaaacagtctcac 37588324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 13604886 - 13604825
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    |||| |||||||||| |||||||| || || ||||||||||| |||||||||||||||||||    
T  13604886 ttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctctctc 13604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 14295498 - 14295611
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  ||||||| ||| ||||||| ||||  || || || |||| | |||||| ||||  | ||| ||||||| ||||||||||||||||    
T  14295498 atataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttatcgacatatcataagctgttttcataagctct 14295597  T
Q  192 ctcaaacagtctca 205  Q
    |||| |||||||||    
T  14295598 ctcagacagtctca 14295611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 37794774 - 37794679
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 189  Q
    ||||||||||| ||| ||||||| | |||||||| ||| |||||  ||||||| | |||||| |||| |  ||||||||||||||||||||||||||    
T  37794774 tataagctatagattattttcatgagctatcctataga-gttatcgaaataagctcaaaacagcttatgaacatgtcataagttgttttcataagct 37794679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 12242777 - 12242674
Alignment:
Q  103 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||| ||||| | ||||  ||||  || |||| | ||||||||| | | |||||||||||||| ||| |||||||||||||||| | ||    
T  12242777 aaattgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaataatc 12242678  T
Q  203 tcac 206  Q
    ||||    
T  12242677 tcac 12242674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 15246826 - 15246933
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacg-gtcatgtcataagttgttttcataagctct 191  Q
    |||||||||| |  ||||||||||| ||||| ||||||| | |||||||||||||  ||| |||||| |  | ||||||||||||| ||||||||| |||    
T  15246826 tataagctatgagctgttttcataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttgctttcataagttct 15246925  T
Q  192 ctcaaaca 199  Q
    | ||||||    
T  15246926 cccaaaca 15246933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 29363057 - 29363100
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  29363057 aaaacaacttatgggcatgtcataagttgttttcataagctctc 29363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 37690715 - 37690600
Alignment:
Q  92 atataagctataaattgttttcataaact-atcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 190  Q
    ||||||||||||| ||||||||||||| | ||  | ||||  ||||  ||||||| | |||||| ||||    ||||||||| ||||| |||||||||||    
T  37690715 atataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctc 37690616  T
Q  191 tctcaaacagtctcac 206  Q
    ||||||||||||||||    
T  37690615 tctcaaacagtctcac 37690600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 7674641 - 7674754
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||| ||||| ||||||||||| ||||| | ||||| || | |||||||| | |||||| ||||    ||||||||||||||||| |||||| |||     
T  7674641 tataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttctt 7674740  T
Q  193 tcaaacagtctcac 206  Q
     ||| |||||||||    
T  7674741 ccaagcagtctcac 7674754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 10391333 - 10391448
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataa--aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 189  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||| |||  ||||||||| ||||||||| |  | ||||||||||  |||||| |||| ||    
T  10391333 atataagctataatttgtttttataagctatcctagag-agttttaaggaaataagttgaaaacaactaatagacatgtcataaagtgtttttataaact 10391431  T
Q  190 ctctcaaacagtctcac 206  Q
    ||  |||||| ||||||    
T  10391432 cttccaaacaatctcac 10391448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 35960338 - 35960516
Alignment:
Q  25 ttatcatttaagtacttactcataagctatttccataatgaaatataaaaataaagtcag--tgtttcaatataagctataaattgttttcataaactat 122  Q
    ||||||| |||||| |||  ||||| ||||||| ||||| ||| |||||| ||||||||   | ||||| ||||| |||||| ||| |||||||| ||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaa-taaagtcaaactatttca-tataaactataagttgatttcataagctat 35960435  T
Q  123 cctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 203  Q
    ||| || |   || | ||||||| | |||||| |||| || |||||| ||||||| || |||||||||||||||| |||||    
T  35960436 cctggaaagcgtaaagaaataagctaaaaacatcttatggacatgtcgtaagttgcttccataagctctctcaaatagtct 35960516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 8090004 - 8090040
Alignment:
Q  168 tcataagttgttttcataagctctctcaaacagtctc 204  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8090004 tcataagttgttttcataagctctctcaaatagtctc 8090040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 10152388 - 10152440
Alignment:
Q  154 aacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||| || |||||||||||||||||||||||||||||  ||| ||||||||    
T  10152388 aacttatggacatgtcataagttgttttcataagctctccaaaatagtctcac 10152440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 15003592 - 15003504
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 180  Q
    ||||||||||||| | |||||||||| |||||| |||||  ||||  |||||| |  |||||||||||||  |||||| ||||||||||    
T  15003592 atataagctataagtggttttcataagctatccaagagagcttatggaaataaatcgaaaacaacttacgaacatgtcgtaagttgttt 15003504  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 2568651 - 2568762
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    |||||||||||| |||||||||||| ||||| | ||||  | || |||||||| | |||| |||||| |   |||||||||| |||||||||||| |||     
T  2568651 tataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttctt 2568750  T
Q  193 tcaaacagtctc 204  Q
      ||||||||||    
T  2568751 ctaaacagtctc 2568762  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 7319398 - 7319465
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 159  Q
    |||||||||||||| ||||||| ||| ||||| | ||||| ||||||||||||| | ||| |||||||    
T  7319398 atataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaagcaactta 7319465  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 17368675 - 17368770
Alignment:
Q  99 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    |||||| |||||||||||| ||||| | |||| |||||  ||||||| | |||||  | || |  |||||||||||||||||||||||| ||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctctc 17368770  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 28586817 - 28586730
Alignment:
Q  119 ctatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||||  ||||  ||||||| | |||||| |||||||  |||||||||| | ||| ||||||||||| |||||||| ||||    
T  28586817 ctatcctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaacagtttcac 28586730  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 10907442 - 10907484
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||| |||||||||||||||||||||||  |||||||||||||    
T  10907442 catgacataagttgttttcataagctcttccaaacagtctcac 10907484  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 12425564 - 12425630
Alignment:
Q  93 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 159  Q
    ||||||||||||  |||||||| || ||||| | ||||| |||| |||||||||| |||||||||||    
T  12425564 tataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaactta 12425630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 12460007 - 12459965
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  12460007 catgtcataagttgttttcataggttctcccaaacagtctcac 12459965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 14980559 - 14980613
Alignment:
Q  150 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 204  Q
    |||||||||| |  ||||||||||||  |||| ||||||||||||||||||||||    
T  14980559 aaacaacttatgtacatgtcataagtcatttttataagctctctcaaacagtctc 14980613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 29590660 - 29590594
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||||| ||||||||||| || || |||||||||| | | ||||||||  ||||||||||||||    
T  29590660 aaataagttgaaaacaacttatggacaagtcataagttttgtccataagctaactcaaacagtctca 29590594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 38047885 - 38047847
Alignment:
Q  164 catgtcataagttgttttcataagctctctcaaacagtc 202  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  38047885 catgtcataagttgtttccataagctctcccaaacagtc 38047847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 5531083 - 5531124
Alignment:
Q  149 aaaacaacttacggtcatgtcataagttgttttcataagctc 190  Q
    ||||||||||| || ||| |||||||||||||||||||||||    
T  5531083 aaaacaacttatggacatatcataagttgttttcataagctc 5531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 29336699 - 29336736
Alignment:
Q  169 cataagttgttttcataagctctctcaaacagtctcac 206  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  29336699 cataagttgtttccataagctctctcaatcagtctcac 29336736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 30269764 - 30269711
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||| | ||||||||||| || ||||| |||||||||||| ||||||||||    
T  30269764 aaataagctaaaaacaacttatgggcatgttataagttgttttaataagctctc 30269711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 2092582 - 2092518
Alignment:
Q  133 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 197  Q
    |||| |||| ||||| ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  2092582 ttatgaaaaaaagttgaaaacaacttatggacatgccataagttgtttcaataagctctcccaaa 2092518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 11457148 - 11457204
Alignment:
Q  150 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||| |||| || ||||||||||||||||| ||||||||||   ||||||||||||    
T  11457148 aaacagcttatggacatgtcataagttgtttccataagctcttcaaaacagtctcac 11457204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 15402903 - 15402807
Alignment:
Q  96 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 192  Q
    ||||||||| |||||||||||| ||||  |||||||  |||| |||| || | ||||||||||| |  ||| |||||| |||||||| |||| ||||    
T  15402903 aagctataagttgttttcataacctattttagagaacgtatagaaattagctgaaaacaacttatgaacatatcataatttgttttcgtaagttctc 15402807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 15905404 - 15905364
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||||||||||||| | ||||||    
T  15905404 tgtcataagctgttttcataagctctctcaaagactctcac 15905364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 16457982 - 16457942
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  16457982 tgtcataagctgttttcataagttctcccaaacagtctcac 16457942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 19113123 - 19113083
Alignment:
Q  166 tgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  19113123 tgtcataagttattttcgtaagctctcccaaacagtctcac 19113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 19369305 - 19369405
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||| ||||||  || ||||||||||| ||| |||||  ||||| |||||| || |||||| ||||| | |||||||| || || || ||||||||||    
T  19369305 atataaactataagctggtttcataaactttcccagagagcttatagaaataaattgaaaacagcttacagacatgtcatgagctgcttccataagctct 19369404  T
Q  192 c 192  Q
    |    
T  19369405 c 19369405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 21768229 - 21768173
Alignment:
Q  138 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 194  Q
    |||||||||| |||||| | || || ||||||||||| ||||||||||||| |||||    
T  21768229 aaaataagttgaaaacagcgtatggacatgtcataagctgttttcataagcactctc 21768173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 36542360 - 36542256
Alignment:
Q  92 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 191  Q
    |||||||||||||  || || ||||| ||||||||||||  || |  ||||||||| |||||| |||  || ||||||||||| ||||| |||||  |||    
T  36542360 atataagctataagctgattccataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgtttccataaaatct 36542261  T
Q  192 ctcaa 196  Q
    |||||    
T  36542260 ctcaa 36542256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 10648 - 10581
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||| | ||||||||||| || |||||||| |||||||| |||||||| | ||||||||||||||    
T  10648 aaataagctgaaaacaacttatggacatgtcattagttgtttacataagctttgtcaaacagtctcac 10581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 9669 - 9606
Alignment:
Q  138 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 201  Q
    |||||||| | |||||| |||| |  ||||| |||||||||||||||||| |||||||||||||    
T  9669 aaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 306332 - 306431
Alignment:
Q  106 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    |||||||||||| ||||||||||||  ||||  || |||| | |||||| |||| || ||||||||||| ||||| ||||||| | ||| || |||||||    
T  306332 ttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccataagcgcactcgaagagtctca 306431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 27615 - 27681
Alignment:
Q  139 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 205  Q
    ||||||| | |||||||||||  | ||||||||||| | ||| ||||||||||| ||||||||||||    
T  27615 aaataagctgaaaacaacttatagccatgtcataagctatttccataagctctcccaaacagtctca 27681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 6611 - 6652
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  6611 atgtcataacttgttttcataatctctctcaaactgtctcac 6652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 6609 - 6650
Alignment:
Q  165 atgtcataagttgttttcataagctctctcaaacagtctcac 206  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  6609 atgtcataacttgttttcataatctctctcaaactgtctcac 6650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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