View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8281_low_10 (Length: 260)
Name: NF8281_low_10
Description: NF8281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8281_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 38918650 - 38918409
Alignment:
| Q |
1 |
tttcttgtaagctttatatttgtgtattttgttttggagaattcttgaattattgtttcgtgctagattagacttgaccagttttataagttttcttatt |
100 |
Q |
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| T |
38918650 |
tttcttgtaagctttatatttgtgtattttgttttggagaattcttgaattattgtttcgtgctagattagacttgaccagttttataagttttcttatt |
38918551 |
T |
|
| Q |
101 |
agccacgataattaacatttggctatagcataaggaagcacagaaaattacataatttatttaatatcagcacagctgcatgcatgtacttattaccatt |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| |
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| T |
38918550 |
agccacgataattaacattaggctatagcataaggaagcacagaaaattacatattttaattaatatcagcacagctgcatgcatgtactaattaccatt |
38918451 |
T |
|
| Q |
201 |
aggattttatttgatatatttcaacgtatgtatctatcttga |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
38918450 |
aggattttatttgatatatttcaacgtatgtatctatcttga |
38918409 |
T |
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