View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8283_low_11 (Length: 344)
Name: NF8283_low_11
Description: NF8283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8283_low_11 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 18 - 302
Target Start/End: Complemental strand, 22932048 - 22931764
Alignment:
| Q |
18 |
ctagggaactaaagtctcgaacacccccaaaataatgatgcttctatggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagta |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||| ||| |||||||||| |
|
|
| T |
22932048 |
ctagggaactaaagtctcgaacacctccaaaataatgatgcttctatggagaatgctaacaagtactttaaggacattggttaaacaaccaaaataagta |
22931949 |
T |
 |
| Q |
118 |
agtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattccttaaccattgtcct |
217 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22931948 |
aattttcaataaaaagtagtgtaattattaattgggcaattgtaacaacttacatttctgagacaaaatttctacttatgaattccttaaccattgtcct |
22931849 |
T |
 |
| Q |
218 |
tagggtacggttagcaagaccttttatctagcatattgtttacttaaaacttagcaatattaatttggaatacataaccgcgaca |
302 |
Q |
| |
|
|||| |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22931848 |
taggatacggttaacaagaccctttatctagcatactgtttacttaaaacttagcaatattaatttggaatacataaccgcgaca |
22931764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 26241709 - 26241594
Alignment:
| Q |
104 |
aactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattcc |
203 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||| ||||||||| ||| ||| ||||||| |||| |||| | |||||| |||||||| || ||| | |
|
|
| T |
26241709 |
aactaaaacaagtaactttttaataaaaagtagtataattattatttgatcaaatgtaacatattacgtttccaaaacaaaacttctacttttggatttc |
26241610 |
T |
 |
| Q |
204 |
ttaaccattgtcctta |
219 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
26241609 |
ttaaccattgccctta |
26241594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 33194691 - 33194774
Alignment:
| Q |
64 |
tggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
|||||||||||||||| ||| | | || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
33194691 |
tggagaatgctaaccattgtccccaagatattggttaagcaactaaaataagtaaatttttaataaaaagtagtgtaatcatta |
33194774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 37928267 - 37928352
Alignment:
| Q |
62 |
tatggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
|||||| ||||||||| ||||| || ||||||||||||| | | |||||||||||||||||| ||||||| ||||||| |||| |
|
|
| T |
37928267 |
tatggaaaatgctaactagtgtctcaaggacattggttaaacatccaaaataagtaagtttttataaaaaagttgtgtaataatta |
37928352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 21857717 - 21857658
Alignment:
| Q |
90 |
gacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaatt |
150 |
Q |
| |
|
|||||| ||||| |||| ||||||||||| |||||| ||||| |||||||||||||||||| |
|
|
| T |
21857717 |
gacattagttaagtaacaaaaataagtaactttttattaaaa-gtagtgtaattattaatt |
21857658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 21946153 - 21946207
Alignment:
| Q |
93 |
attggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||||||| |||||||||||| |
|
|
| T |
21946153 |
attggttaaaatactaaaataagtaactttgcaataaaaagttgtgtaattatta |
21946207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 49731280 - 49731151
Alignment:
| Q |
90 |
gacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttc |
189 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |||| ||| ||||||| ||||||| | | |||||| ||| |
|
|
| T |
49731280 |
gacattggttaaacaactaaaacaagtaagtttttaataaaaagtagtataattattatttggtcaaatgtaacatcttacatcttcaagacaaaacttc |
49731181 |
T |
 |
| Q |
190 |
tacttatgaattccttaaccattgtcctta |
219 |
Q |
| |
|
||||| || ||||||||||||||||||||| |
|
|
| T |
49731180 |
tacttttggattccttaaccattgtcctta |
49731151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 18786540 - 18786436
Alignment:
| Q |
117 |
aagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattccttaaccattgtcc |
216 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||| |||||| || || ||| ||||| | |||||| || ||||||| |||||||||||||||||| |
|
|
| T |
18786540 |
aagtttttaataaaaaacagtgtaattattacttggtcaattgcaatagtttatatttccaagacaaaagttttacttatagattccttaaccattgtcc |
18786441 |
T |
 |
| Q |
217 |
ttagg |
221 |
Q |
| |
|
||||| |
|
|
| T |
18786440 |
ttagg |
18786436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 33148908 - 33148951
Alignment:
| Q |
104 |
aactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33148908 |
aactaaaataagtaagtttttaataaaaagtagtgtaattatta |
33148951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 36160565 - 36160681
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttcta |
191 |
Q |
| |
|
|||||||||| || ||||| ||||||||| ||||||||||||||||||||||||| || | ||| |||| |||||| |||||| | |||||| ||||| |
|
|
| T |
36160565 |
cattggttaagcaattaaaacaagtaagttcttaataaaaagtagtgtaattattactttgtcaaatgta--agcttatatttctaagacaaaacttcta |
36160662 |
T |
 |
| Q |
192 |
cttatgaattccttaacca |
210 |
Q |
| |
|
||||| |||| ||||||| |
|
|
| T |
36160663 |
tttatggattctttaacca |
36160681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 39238844 - 39238955
Alignment:
| Q |
108 |
aaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattccttaa |
207 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||| |||| ||| ||| ||||||| ||||||||| | | | ||||||| || ||||| ||||||||| |
|
|
| T |
39238844 |
aaaacaagtaagtttttaataaaaaatagtgtaatcattacttgatcaaatgtaacaacttacatttttaagagaaaatttttatttatggattccttaa |
39238943 |
T |
 |
| Q |
208 |
ccattgtcctta |
219 |
Q |
| |
|
||| || ||||| |
|
|
| T |
39238944 |
ccaatgccctta |
39238955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 48887761 - 48887851
Alignment:
| Q |
62 |
tatggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgg |
152 |
Q |
| |
|
|||||||||||||||||||||| || | |||||||||| |||||||| ||||||||||||||| ||||||| || ||| |||| |||| |
|
|
| T |
48887761 |
tatggagaatgctaaccagtgtcctggaggcattggttaagcaactaaaacaagtaagtttttaatgaaaagtaatgcaatcattatttgg |
48887851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 15398360 - 15398283
Alignment:
| Q |
94 |
ttggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacattt |
174 |
Q |
| |
|
|||||||| ||| ||||| || |||||||||||| ||||||||| ||||||| |||| ||| ||||||| ||||||||| |
|
|
| T |
15398360 |
ttggttaagtaattaaaacaaataagtttttaattaaaagtagt---attattacttggtcaaatgtaacatcttacattt |
15398283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 26829503 - 26829636
Alignment:
| Q |
106 |
ctaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattcctt |
205 |
Q |
| |
|
||||||||||||| |||| | ||||||| ||||||| |||| || ||| |||||| |||| ||||| | |||||||||||| || | |||| ||| |
|
|
| T |
26829503 |
ctaaaataagtaaattttcatgaaaaagttgtgtaatcattactttatcaaaagtaacatcttatatttccaagacaaaatttctaattgtaaatttctt |
26829602 |
T |
 |
| Q |
206 |
aaccattgtccttagggtac-ggttagcaagacc |
238 |
Q |
| |
|
|||||||| |||||||| || |||||||||||| |
|
|
| T |
26829603 |
aaccattgcccttagggcacttgttagcaagacc |
26829636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 36013063 - 36013099
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaata |
128 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
36013063 |
cattggttaaataactaaaacaagtaactttttaata |
36013099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 234
Target Start/End: Complemental strand, 1712067 - 1711897
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaaca |
164 |
Q |
| |
|
||||||||||||||||||| |||| | |||||||||| ||||||||||||||| ||||||||||||| |||| ||||||||| || | ||| ||||||| |
|
|
| T |
1712067 |
ggagaatgctaaccagtgtactaagggtattggttaaacaactaaaataagtaaatttttaataaaaaatagtataattattacttagtcaaatgtaaca |
1711968 |
T |
 |
| Q |
165 |
gcttacatttctgatacaaaatttctacttatgaattccttaaccattgtccttagggtac-ggttagcaa |
234 |
Q |
| |
|
|||| |||| | ||||||||| || || | ||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
1711967 |
tcttatattttcaagacaaaatttataattttagattccttaaccattgtctttagagtactggttagcaa |
1711897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 20406582 - 20406711
Alignment:
| Q |
109 |
aaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattccttaac |
208 |
Q |
| |
|
|||||||||||||||||||||||||| ||| || |||| |||| ||| |||| |||||| |||||| | | |||| ||||||||||| ||||||||| |
|
|
| T |
20406582 |
aaataagtaagtttttaataaaaagttatgt-atcattacttggtcaaatgtagcagcttgcatttccaagataaaacttctacttatggattccttaat |
20406680 |
T |
 |
| Q |
209 |
cattgtccttagggtac-ggttagcaagacc |
238 |
Q |
| |
|
||||| ||||||| || | ||||||||||| |
|
|
| T |
20406681 |
cattgctcttagggcactgattagcaagacc |
20406711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 31069660 - 31069611
Alignment:
| Q |
108 |
aaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaat |
157 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
31069660 |
aaaataagtacgtttttaataaaaagtagtgtaattattacttggtcaat |
31069611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 46647454 - 46647530
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaat |
142 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| ||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
46647454 |
ggagaatgctaaccagtgcctcaaggacattggttaag-aactataacaagtaagtttttaataaaaagtagtgtaat |
46647530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 40843060 - 40843114
Alignment:
| Q |
93 |
attggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||| | ||||||||| |
|
|
| T |
40843060 |
attggttaaacaactaaaataaataaatttttaataaaaagtaatataattatta |
40843114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 37043099 - 37043030
Alignment:
| Q |
95 |
tggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaaca |
164 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||| |||| |||| ||| ||| ||||||| |
|
|
| T |
37043099 |
tggttaaacaactaaatcaagtaagtttttaataaaaagtagtataatcattacttgatcaaatgtaaca |
37043030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 45054384 - 45054500
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttcta |
191 |
Q |
| |
|
||||||||||| | ||||| ||||||| ||||| |||||| ||||||||| |||| || | ||| ||||||| ||| |||||| | |||| |||||| |
|
|
| T |
45054384 |
cattggttaaacagttaaaagaagtaagattttattaaaaaatagtgtaataattagttagtcaaaagtaacagtttatatttctaacacaatttttcta |
45054483 |
T |
 |
| Q |
192 |
cttatgaattccttaac |
208 |
Q |
| |
|
||| |||||| |||||| |
|
|
| T |
45054484 |
cttttgaatttcttaac |
45054500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 143
Target Start/End: Complemental strand, 2379704 - 2379669
Alignment:
| Q |
108 |
aaaataagtaagtttttaataaaaagtagtgtaatt |
143 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2379704 |
aaaataagtaagtttttattaaaaagtagtgtaatt |
2379669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 37822676 - 37822786
Alignment:
| Q |
64 |
tggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaac |
163 |
Q |
| |
|
|||||||||||||| | || ||| ||||||||||||| || ||||| | |||||||||||||||||| |||| | || |||| || ||| |||||| |
|
|
| T |
37822676 |
tggagaatgctaactaatgcgctatagacattggttaaacaattaaaacatgtaagtttttaataaaaactagtattatcattacctgatcaaatgtaac |
37822775 |
T |
 |
| Q |
164 |
agcttacattt |
174 |
Q |
| |
|
| ||||||||| |
|
|
| T |
37822776 |
atcttacattt |
37822786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 4195476 - 4195416
Alignment:
| Q |
62 |
tatggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagttt |
122 |
Q |
| |
|
|||||||||||||||||| || ||| | ||||||||||| |||||||||||||||||| |
|
|
| T |
4195476 |
tatggagaatgctaaccattgctcttggggcattggttaaagtactaaaataagtaagttt |
4195416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 1447670 - 1447549
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttcta |
191 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||| ||||| | | |||||||||| |
|
|
| T |
1447670 |
cattggttaagcaacaaaaataagtaagtttttaatgaaaagtagtgtaattattacttggtcaactgtaacagcttatatttccaaaataaaatttcta |
1447571 |
T |
 |
| Q |
192 |
cttatgaattccttaaccattg |
213 |
Q |
| |
|
|||||| ||| ||||| ||||| |
|
|
| T |
1447570 |
cttatggatttcttaatcattg |
1447549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 221
Target Start/End: Complemental strand, 26402123 - 26401994
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttcta |
191 |
Q |
| |
|
||||||||| | |||||||||||||| |||| |||||||||| ||||||| ||| | | ||| || | ||||| |||||| |||||||||||||| |
|
|
| T |
26402123 |
cattggttagagtactaaaataagtaatttttcaataaaaagttgtgtaatcattgttaagacaaaagtgaaagcttgcatttccaatacaaaatttcta |
26402024 |
T |
 |
| Q |
192 |
cttatgaattccttaaccattgtccttagg |
221 |
Q |
| |
|
|| ||| |||||||||||||||| |||||| |
|
|
| T |
26402023 |
ctaatggattccttaaccattgttcttagg |
26401994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 35626673 - 35626732
Alignment:
| Q |
180 |
acaaaatttctacttatgaattccttaaccattgtccttagggtac-ggttagcaagacc |
238 |
Q |
| |
|
|||||||||||| | ||| |||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
35626673 |
acaaaatttctattaatggattccttaaccattgtccttagggcactagttagcaagacc |
35626732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 14152587 - 14152533
Alignment:
| Q |
93 |
attggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
||||||||| |||| |||| |||||| ||||| ||||||||| |||||||||||| |
|
|
| T |
14152587 |
attggttaagtaaccaaaacaagtaacttttttataaaaagtggtgtaattatta |
14152533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 12677829 - 12677945
Alignment:
| Q |
104 |
aactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattcc |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||| ||| |||||||| | | |||||||||||||||| ||| | |
|
|
| T |
12677829 |
aactaaaacaagtaagtttttaataaaaagtagtgtaatcattacttggtcaaatgtaatcgctcacatttctaagagaaaatttctacttatggatttc |
12677928 |
T |
 |
| Q |
204 |
ttaaccattgtccttag |
220 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
12677929 |
ttaaccaatgtccttag |
12677945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 2911583 - 2911462
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttcta |
191 |
Q |
| |
|
|||||||||| || ||||| || ||||||||||| |||||||||| |||| |||| ||| ||| ||||||| ||||||||| | |||||| ||||| |
|
|
| T |
2911583 |
cattggttaagcaattaaaacaaataagtttttaaaaaaaagtagtataatcattacttgatcaaatgtaacatcttacattttcaagacaaaacttcta |
2911484 |
T |
 |
| Q |
192 |
cttatgaattccttaaccattg |
213 |
Q |
| |
|
||| | ||||| |||||||||| |
|
|
| T |
2911483 |
cttttaaattctttaaccattg |
2911462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 30929465 - 30929575
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttt-taataaaaagtagtgtaattattaattgggcaattgtaac |
163 |
Q |
| |
|
||||||||||||| |||| || || | |||||||||| ||||||| |||||| |||| |||||||||||||| ||||||||| ||| ||| |||||| |
|
|
| T |
30929465 |
ggagaatgctaactagtgctccaagggcattggttaagcgactaaaacaagtaaattttttaataaaaagtagtataattattatttgatcaaatgtaac |
30929564 |
T |
 |
| Q |
164 |
agcttacattt |
174 |
Q |
| |
|
| |||| |||| |
|
|
| T |
30929565 |
atcttaaattt |
30929575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 10008188 - 10008245
Alignment:
| Q |
90 |
gacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
|||||||||||| ||| |||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
10008188 |
gacattggttaagcaaccaaaagaagtaagtttttattaaaaagtggtgtaattatta |
10008245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 5611272 - 5611129
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaaca |
164 |
Q |
| |
|
||||||||||||||||| | ||| | |||||||||| | | |||| ||||||||||||| || |||| || ||||||||| ||| || |||||| |
|
|
| T |
5611272 |
ggagaatgctaaccagtatcataaaggtattggttaaacatccaaaacaagtaagtttttatgaataagttgtataattattatttgattaaaagtaaca |
5611173 |
T |
 |
| Q |
165 |
gcttacatttctgatacaaaatttctacttatgaattccttaac |
208 |
Q |
| |
|
|||| |||||| | |||||||||||| |||| |||||||||| |
|
|
| T |
5611172 |
tcttatatttctaagacaaaatttctatttatagattccttaac |
5611129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 2470455 - 2470495
Alignment:
| Q |
199 |
attccttaaccattgtccttagggtac-ggttagcaagacc |
238 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
2470455 |
attccttaaccattgtcctgagggtactggttagcaagacc |
2470495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 52370508 - 52370376
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaaca |
164 |
Q |
| |
|
|||||||| |||||| || | ||| || ||||||||| || |||||||| ||||||||||||||| |||||||||||||||| |||| ||||||||||| |
|
|
| T |
52370508 |
ggagaatgttaaccactgatataaggatattggttaagcaattaaaataaataagtttttaataaatagtagtgtaattattacttggtcaattgtaaca |
52370409 |
T |
 |
| Q |
165 |
gcttacatttctgatacaaaatttctacttatg |
197 |
Q |
| |
|
||||||||||| | ||||||||| || ||||| |
|
|
| T |
52370408 |
gcttacatttccaaaacaaaatttttatttatg |
52370376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 36752762 - 36752655
Alignment:
| Q |
98 |
ttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatg |
197 |
Q |
| |
|
||||| |||||||| |||||| ||||||||||||| | |||||||||||| |||| ||| || ||||||||||||||| | | |||| ||||||||||| |
|
|
| T |
36752762 |
ttaaacaactaaaacaagtaaatttttaataaaaaattgtgtaattattacttggtcaaatggaacagcttacatttccaaca-aaaacttctacttatg |
36752664 |
T |
 |
| Q |
198 |
aattcctta |
206 |
Q |
| |
|
||||||||| |
|
|
| T |
36752663 |
aattcctta |
36752655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 34341395 - 34341473
Alignment:
| Q |
68 |
gaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatt |
146 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| |
|
|
| T |
34341395 |
gaatgctaacgagtgttcttgagacattggttaaagttctcaaatatgtaagtttgtattaaaaagttgtgtaattatt |
34341473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 35808648 - 35808568
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatt |
146 |
Q |
| |
|
|||||||| ||| |||||| || | | |||||||||| ||| ||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
35808648 |
ggagaatgttaaacagtgtcctcaagtcattggttaagcaaccaaaataagtaacttttt-ataaaaagttgtgtaattatt |
35808568 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 27133653 - 27133693
Alignment:
| Q |
199 |
attccttaaccattgtccttagggtac-ggttagcaagacc |
238 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
27133653 |
attccttaaccattgtcctgagggtactggttagcaagacc |
27133693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 37461882 - 37461827
Alignment:
| Q |
91 |
acattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
||||||||||| || |||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
37461882 |
acattggttaagcaattaaaataagtaacttttta-taaaaagtggtgtaattatta |
37461827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 44655356 - 44655252
Alignment:
| Q |
86 |
taatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaa |
185 |
Q |
| |
|
||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||| |||| | |||||| |
|
|
| T |
44655356 |
taatgacattgattaaacaaccaaaataaataagtttttaataaaaagtagtgtaattattacttggtcaattgtaacaacttatttttccaagacaaaa |
44655257 |
T |
 |
| Q |
186 |
tttct |
190 |
Q |
| |
|
||||| |
|
|
| T |
44655256 |
tttct |
44655252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 12981554 - 12981685
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaataaaaagta----gtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatt |
187 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||||| || |||| |||| |||| ||| ||||||| ||||||||| | |||||||| |
|
|
| T |
12981554 |
cattggttaagcacctaaaataagtaagtttttaataaaaagtactccgtataatcattacttggtcaaatgtaacatcttacattttcaagacaaaatt |
12981653 |
T |
 |
| Q |
188 |
tctacttatgaattccttaaccattgtcctta |
219 |
Q |
| |
|
|||| || |||||||||||||||||||||||| |
|
|
| T |
12981654 |
tctaattttgaattccttaaccattgtcctta |
12981685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 238
Target Start/End: Original strand, 3137368 - 3137544
Alignment:
| Q |
63 |
atggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaa |
162 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| | | |||| || ||||||| || ||||||| ||||||| |||| ||| ||| |||| |
|
|
| T |
3137368 |
atggagaatgctaaccagtgccctaagaacattggttaggcatccaaaacaaataagtttatatgaaaaagttgtgtaataattacttgatcaaaagtaa |
3137467 |
T |
 |
| Q |
163 |
cagcttacatttctgatacaaaatttctacttatgaattccttaaccattgtccttagggtac-ggttagcaagacc |
238 |
Q |
| |
|
|| ||||||||| | |||||||||||| || |||||| ||||||||||| ||| |||| || ||||||||||||| |
|
|
| T |
3137468 |
catcttacattttcaagacaaaatttctatttctgaatttcttaaccattgccctgagggcactggttagcaagacc |
3137544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 13462027 - 13461983
Alignment:
| Q |
98 |
ttaaataactaaaataagtaagtttttaataaaaagtagtgtaat |
142 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13462027 |
ttaaatatctaaaataagtaagtttttaataaaaagttgtgtaat |
13461983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 3670555 - 3670593
Alignment:
| Q |
108 |
aaaataagtaagtttttaataaaaagtagtgtaattatt |
146 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
3670555 |
aaaataagtaagtttttattaaaaagttgtgtaattatt |
3670593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 238
Target Start/End: Original strand, 11150890 - 11151066
Alignment:
| Q |
62 |
tatggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgta |
161 |
Q |
| |
|
|||||||||||||||||| || |||| | |||||||||| | ||||||||||||||||||| ||||| | ||||||| |||| ||| ||| ||| |
|
|
| T |
11150890 |
tatggagaatgctaaccactgccctaagggcattggttaagcattcaaaataagtaagtttttaa-aaaaaattgtgtaatcattatttgatcaaaagta |
11150988 |
T |
 |
| Q |
162 |
acagcttacatttctgatacaaaatttctacttatgaattccttaaccattgtccttagggta-cggttagcaagacc |
238 |
Q |
| |
|
||| |||| |||||| | |||||| || || || | ||||||||| ||||| ||| |||| | ||||||| |||||| |
|
|
| T |
11150989 |
acatcttatatttctaagacaaaaattttatttgtagattccttaatcattgccctgagggcaccggttaggaagacc |
11151066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 24334531 - 24334572
Alignment:
| Q |
180 |
acaaaatttctacttatgaattccttaaccattgtccttagg |
221 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| | |||||| |
|
|
| T |
24334531 |
acaaaatttctactaatgaattccttaaccattattcttagg |
24334572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 32881111 - 32881160
Alignment:
| Q |
93 |
attggttaaataactaaaataagtaagtttttaataaaaagtagtgtaat |
142 |
Q |
| |
|
|||||||||| | | |||||||||||||||||||||||| || ||||||| |
|
|
| T |
32881111 |
attggttaaacatccaaaataagtaagtttttaataaaatgttgtgtaat |
32881160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 547034 - 547114
Alignment:
| Q |
67 |
agaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||| || |||||| ||||| ||||| | ||||||| |||||||||||| |
|
|
| T |
547034 |
agaatgctaacgagtgccataatgacattgattaagtatctaaaacaagtacgttttaatgaaaaagttgtgtaattatta |
547114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 31330970 - 31331006
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaa |
101 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
31330970 |
ggagaatgttaaccagtgttctaaggacattggttaa |
31331006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 33609292 - 33609169
Alignment:
| Q |
90 |
gacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttc |
189 |
Q |
| |
|
|||||||||||| || |||||||| ||||||||||||||||| ||||||| |||||| ||| ||| ||||||| ||||||||||| | | ||||||| |
|
|
| T |
33609292 |
gacattggttaagcaattaaaataaataagtttttaataaaaaatagtgtacttattatttgatcaaatgtaacatcttacatttctaagatcaaatttc |
33609193 |
T |
 |
| Q |
190 |
tacttatgaattccttaaccattg |
213 |
Q |
| |
|
||||| |||||||||||| ||||| |
|
|
| T |
33609192 |
tacttttgaattccttaatcattg |
33609169 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 5525424 - 5525323
Alignment:
| Q |
68 |
gaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagct |
167 |
Q |
| |
|
|||||||||| ||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||| ||| ||||||| || |
|
|
| T |
5525424 |
gaatgctaactagtgt-ctaaaggcattggttaagcaactaaaataagtaagtttttaataaaaagtagtataatcattatttggtcaaatgtaacatct |
5525326 |
T |
 |
| Q |
168 |
tac |
170 |
Q |
| |
|
||| |
|
|
| T |
5525325 |
tac |
5525323 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 604755 - 604853
Alignment:
| Q |
114 |
agtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttctacttatgaattccttaaccatt |
212 |
Q |
| |
|
||||| |||||||||||||||||| |||| |||| |||| ||| ||||||| |||||||||| | | |||||||||||||||| |||| |||||||| |
|
|
| T |
604755 |
agtaaatttttaataaaaagtagtataatcattacttggtcaaatgtaacatcttacatttccaaaagaaaatttctacttatgggttccctaaccatt |
604853 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 4652179 - 4652023
Alignment:
| Q |
65 |
ggagaatgctaaccagtgttctaatgacattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaaca |
164 |
Q |
| |
|
|||||||||||| |||||| || | ||||| |||| || |||||||||||||||||| ||||||| ||||||| |||| |||| || ||||||| |
|
|
| T |
4652179 |
ggagaatgctaattagtgttttagaggcattgattaagcaaataaaataagtaagttttttataaaaatatgtgtaatcattacttggttaaatgtaaca |
4652080 |
T |
 |
| Q |
165 |
gcttacatttctgatacaaaatttctacttatgaattccttaaccattgtccttagg |
221 |
Q |
| |
|
|||||||||| | |||||| ||| ||||||| |||| |||| || |||||||||| |
|
|
| T |
4652079 |
gcttacattttcaagacaaaacttcaacttatggattctttaatcaatgtccttagg |
4652023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 27896463 - 27896515
Alignment:
| Q |
95 |
tggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattatta |
147 |
Q |
| |
|
|||||||| ||| |||||||||||||||| | |||||||| |||||||||||| |
|
|
| T |
27896463 |
tggttaaacaaccaaaataagtaagttttaattaaaaagttgtgtaattatta |
27896515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 9021470 - 9021588
Alignment:
| Q |
92 |
cattggttaaataactaaaataagtaagtttttaataaaaagtagtgtaattattaattgggcaattgtaacagcttacatttctgatacaaaatttcta |
191 |
Q |
| |
|
|||||||||| || | |||||||| ||||||| | ||||| ||||||||| |||| || | ||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
9021470 |
cattggttaagtatccaaaataagaaagttttcacaaaaaaatagtgtaatcattatttagtcaaaaataacatcttacatttccaagacaaaatttcta |
9021569 |
T |
 |
| Q |
192 |
cttatgaattccttaacca |
210 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
9021570 |
gttatgggttccttaacca |
9021588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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