View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8284_low_6 (Length: 372)
Name: NF8284_low_6
Description: NF8284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8284_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 2 - 353
Target Start/End: Complemental strand, 4956772 - 4956421
Alignment:
| Q |
2 |
tagattattctccatcagacgatgattttgaggatattcatggttttggatttctaatggatttgcgtaatcgttttgaactttcaatcccttccacata |
101 |
Q |
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| T |
4956772 |
tagataattctccaacagacgatgattatgaggatattcatggttttggatttctaatggatttgcgtaatcgttttgaactttcaattccttccacata |
4956673 |
T |
|
| Q |
102 |
ttttggaaattgtttatcattttgtcttgcaacactaccaaagaggaagttagtgggagaaaatggtatatgtgaagcagcaaatattattggaagagaa |
201 |
Q |
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| T |
4956672 |
ttttggaaattgtttatcattttgtcttgcaacactaccaaagaggaagttagtgggagaaaatggtatatgtgaagcagcaaatattattggaagagaa |
4956573 |
T |
|
| Q |
202 |
ataagtttgaaagatcctttaaaagaagataaagagtttaacaagtctttgaatatgattcgtgtaatagggtcaccaaagtttgatgtgtatgaaactg |
301 |
Q |
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| T |
4956572 |
ataagtttgaaagatcctttaaaagaagataaagagtttaacaagtctttgaatatgattcgtgtaatagggtcaccaaagtttgatgtgtatgaaactg |
4956473 |
T |
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| Q |
302 |
actttggattggggaagcctattttaaccgatgttatcaataatgatgaatc |
353 |
Q |
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| T |
4956472 |
actttggattggggaagcctattttaaccgatgttatcaataatgatgaatc |
4956421 |
T |
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