View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8289_high_1 (Length: 760)

Name: NF8289_high_1
Description: NF8289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8289_high_1
NF8289_high_1
[»] chr3 (25 HSPs)
chr3 (12-741)||(39153647-39154374)
chr3 (449-741)||(29681949-29682241)
chr3 (482-741)||(22835288-22835547)
chr3 (482-708)||(32744747-32744979)
chr3 (488-741)||(9580911-9581165)
chr3 (520-741)||(19684175-19684397)
chr3 (490-741)||(760477-760729)
chr3 (520-668)||(46859924-46860072)
chr3 (490-668)||(41820090-41820268)
chr3 (529-697)||(3323255-3323423)
chr3 (582-697)||(6794333-6794448)
chr3 (520-697)||(37466648-37466826)
chr3 (597-645)||(7762011-7762060)
chr3 (580-697)||(3327973-3328089)
chr3 (597-650)||(31340627-31340681)
chr3 (597-645)||(7764199-7764248)
chr3 (597-648)||(27986109-27986161)
chr3 (597-646)||(21711605-21711655)
chr3 (597-646)||(33386308-33386358)
chr3 (597-646)||(37408206-37408256)
chr3 (597-646)||(37726078-37726128)
chr3 (597-646)||(40734245-40734295)
chr3 (597-646)||(47923536-47923586)
chr3 (597-645)||(9636500-9636549)
chr3 (597-645)||(45094911-45094960)
[»] chr2 (17 HSPs)
chr2 (449-741)||(42361942-42362234)
chr2 (482-741)||(11690123-11690383)
chr2 (499-733)||(724038-724272)
chr2 (520-741)||(11151877-11152099)
chr2 (520-737)||(14634116-14634332)
chr2 (520-741)||(34140057-34140278)
chr2 (651-741)||(14202693-14202783)
chr2 (597-646)||(2334788-2334838)
chr2 (597-646)||(28258821-28258871)
chr2 (597-645)||(5723626-5723675)
chr2 (597-645)||(36988447-36988496)
chr2 (521-668)||(42288675-42288822)
chr2 (654-697)||(10445168-10445210)
chr2 (520-555)||(14202847-14202882)
chr2 (500-555)||(14635199-14635254)
chr2 (597-646)||(34389254-34389304)
chr2 (597-646)||(13569734-13569783)
[»] chr6 (23 HSPs)
chr6 (482-741)||(28137694-28137955)
chr6 (490-741)||(16566838-16567088)
chr6 (520-741)||(16568703-16568925)
chr6 (482-668)||(5043043-5043229)
chr6 (597-648)||(9183379-9183431)
chr6 (598-645)||(5407280-5407328)
chr6 (597-650)||(26954670-26954724)
chr6 (521-625)||(2973551-2973654)
chr6 (597-645)||(5406570-5406619)
chr6 (597-645)||(5410895-5410944)
chr6 (597-645)||(5413820-5413869)
chr6 (607-648)||(5571918-5571959)
chr6 (597-645)||(16452812-16452861)
chr6 (652-697)||(31936928-31936973)
chr6 (597-645)||(33160726-33160775)
chr6 (598-645)||(5411605-5411653)
chr6 (597-646)||(5017139-5017189)
chr6 (597-646)||(10076834-10076884)
chr6 (597-646)||(18234487-18234537)
chr6 (597-646)||(31086116-31086166)
chr6 (597-645)||(16452701-16452750)
chr6 (597-645)||(30834909-30834958)
chr6 (597-645)||(31405046-31405095)
[»] chr8 (15 HSPs)
chr8 (449-741)||(6598561-6598854)
chr8 (449-741)||(6674014-6674307)
chr8 (596-741)||(41365133-41365280)
chr8 (535-708)||(1292772-1292946)
chr8 (456-620)||(5990083-5990248)
chr8 (529-697)||(19751969-19752139)
chr8 (482-560)||(41365296-41365374)
chr8 (597-645)||(34254700-34254749)
chr8 (597-648)||(4696271-4696323)
chr8 (597-648)||(19945708-19945760)
chr8 (597-646)||(10014906-10014956)
chr8 (597-646)||(42497962-42498012)
chr8 (597-645)||(1746590-1746639)
chr8 (597-645)||(17982400-17982449)
chr8 (597-645)||(31218004-31218053)
[»] chr5 (19 HSPs)
chr5 (482-741)||(5887702-5887961)
chr5 (523-741)||(31182636-31182855)
chr5 (572-741)||(8566233-8566392)
chr5 (656-741)||(33831476-33831562)
chr5 (500-710)||(16451730-16451942)
chr5 (587-697)||(28832596-28832706)
chr5 (529-697)||(24553102-24553270)
chr5 (490-668)||(27638181-27638359)
chr5 (597-645)||(13239499-13239548)
chr5 (529-697)||(31300171-31300339)
chr5 (597-645)||(37438893-37438942)
chr5 (652-697)||(17003658-17003703)
chr5 (652-697)||(42127068-42127113)
chr5 (597-646)||(9352978-9353028)
chr5 (597-646)||(14520633-14520683)
chr5 (597-646)||(36931993-36932043)
chr5 (597-645)||(25412509-25412558)
chr5 (597-645)||(30182335-30182384)
chr5 (607-648)||(40146819-40146860)
[»] chr1 (19 HSPs)
chr1 (490-741)||(8551073-8551325)
chr1 (520-708)||(40122516-40122704)
chr1 (520-733)||(834461-834659)
chr1 (500-668)||(37167733-37167897)
chr1 (520-668)||(47114626-47114774)
chr1 (580-697)||(47098451-47098569)
chr1 (520-625)||(7482842-7482946)
chr1 (589-697)||(32889791-32889901)
chr1 (520-609)||(3847446-3847535)
chr1 (631-697)||(27104080-27104145)
chr1 (580-697)||(47102465-47102583)
chr1 (581-697)||(9476615-9476732)
chr1 (522-625)||(34602930-34603032)
chr1 (597-646)||(13604266-13604316)
chr1 (533-625)||(34603062-34603153)
chr1 (665-697)||(197230-197262)
chr1 (608-646)||(16455405-16455443)
chr1 (597-646)||(29652217-29652267)
chr1 (597-646)||(37070171-37070221)
[»] chr7 (18 HSPs)
chr7 (520-741)||(38671508-38671729)
chr7 (523-738)||(41649298-41649514)
chr7 (520-741)||(25615517-25615745)
chr7 (520-668)||(3258448-3258596)
chr7 (529-697)||(9189580-9189749)
chr7 (520-624)||(31518465-31518570)
chr7 (580-697)||(23402638-23402755)
chr7 (653-697)||(2580742-2580786)
chr7 (533-697)||(9184750-9184917)
chr7 (597-644)||(19495718-19495766)
chr7 (480-640)||(3050520-3050681)
chr7 (597-645)||(23554787-23554836)
chr7 (597-646)||(2647340-2647390)
chr7 (655-697)||(20284442-20284484)
chr7 (597-646)||(44847769-44847819)
chr7 (597-645)||(24515132-24515181)
chr7 (598-646)||(33332094-33332143)
chr7 (597-649)||(47676504-47676557)
[»] chr4 (24 HSPs)
chr4 (482-737)||(47038699-47038949)
chr4 (651-741)||(5871612-5871702)
chr4 (482-625)||(46702915-46703058)
chr4 (490-668)||(378802-378980)
chr4 (490-625)||(5870017-5870152)
chr4 (674-741)||(13009717-13009784)
chr4 (520-668)||(41963869-41964017)
chr4 (589-648)||(39773973-39774033)
chr4 (597-646)||(25861676-25861726)
chr4 (205-250)||(31438382-31438427)
chr4 (597-648)||(5396334-5396386)
chr4 (597-644)||(52095733-52095781)
chr4 (520-555)||(12072845-12072880)
chr4 (661-692)||(26699990-26700021)
chr4 (597-646)||(5148081-5148131)
chr4 (597-646)||(5268843-5268893)
chr4 (597-646)||(8689140-8689190)
chr4 (597-646)||(16622937-16622987)
chr4 (597-646)||(27417540-27417590)
chr4 (597-646)||(36314873-36314923)
chr4 (597-646)||(36329082-36329132)
chr4 (597-646)||(52083028-52083078)
chr4 (597-646)||(52094035-52094085)
chr4 (598-646)||(16628517-16628566)
[»] scaffold0140 (1 HSPs)
scaffold0140 (597-646)||(8061-8111)
[»] scaffold0098 (1 HSPs)
scaffold0098 (597-646)||(45602-45652)
[»] scaffold0006 (2 HSPs)
scaffold0006 (597-646)||(132923-132973)
scaffold0006 (597-646)||(2897-2947)
[»] scaffold0016 (1 HSPs)
scaffold0016 (597-645)||(114333-114382)


Alignment Details
Target: chr3 (Bit Score: 687; Significance: 0; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 687; E-Value: 0
Query Start/End: Original strand, 12 - 741
Target Start/End: Complemental strand, 39154374 - 39153647
Alignment:
Q  12 gagatgaacaagacaattaggaacctgaaacaaacaaatacaaattattttagcacgaaatagtaaaataatgagtaggagaaggaaggttctgaaaata 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39154374 gagatgaacaagacaattaggaacctgaaacaaacaaatacaaattattttagcacgaaatagtaaaataatgagtaggagaaggaaggttctgaaaata 39154275  T
Q  112 tatataccttatcagacatggtgtcttggattgtttgagcatcagaagttatggtggcaattacttggaaggttgtagaagagttagtttgcttgtcaaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39154274 tatataccttatcagacatggtgtcttggattgtttgagcatcagaagttatggtggcaattacttggaaggttgtagaagagttagtttgcttgtcaaa 39154175  T
Q  212 gaaaccaacttcttgtcttaggattgattttagatattcaatcctcatccgcgaagtttgtctttctgcagttcttgtccagcatactccaactgcaaga 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39154174 gaaaccaacttcttgtcttaggattgattttagatattcaatcctcatccgcgaagtttgtctttctgcagttcttgtccagcatactccaactgcaaga 39154075  T
Q  312 aaatatttagacactattggaatcaatattacacttgacaagttctacaaattatatgcagttacaacatgagaagttgttttactttatatctagcctc 411  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39154074 aaatatttagacactattggaatcaatattacagttgacaagttcttcaaattatatgcagttacaacatgagaagttgttttactttatatctagcctc 39153975  T
Q  412 cttagcaaggcgcaaattggcaaaggtgatacatgcatgttgtaatttgccttcaaattagtgttgctggaaactcataatcgtgacacgattttgagtg 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39153974 cttagcaaggcgcaaattggcaaaggtgatacatgcatgttgtaatttgccttcaaattcgtgttgctggaaactcataatcgtgacacgattttgagtg 39153875  T
Q  512 gcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgt 611  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39153874 gcgcgtcacgattttgatggcagaatggatggtttctgctgaaggcaaaacgtgacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgt 39153775  T
Q  612 accttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaa 711  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  39153774 accttgggtcgtactcatcaatcgtgacacgattttggatggcgcgacgcgattttg--tgtcactgtgtactatttaagtgtttcagctcatttttgaa 39153677  T
Q  712 ggaagtggagagagaacttcaagagaggaa 741  Q
    ||||||||||||| ||||||||||||||||    
T  39153676 ggaagtggagagaaaacttcaagagaggaa 39153647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 449 - 741
Target Start/End: Original strand, 29681949 - 29682241
Alignment:
Q  449 tgttgtaatttgccttcaaattagtgttgctggaaactcataatcgtgacacgatttt-gagtggcgcgtcacgattttggtggcagaatggatggtttc 547  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  29681949 tgttgtaatttgccttcaaattagtgttgctgaagactcataatcgtgacacgatttttgagtggcgcgtcacgattttgctggcagaatggatggtttc 29682048  T
Q  548 tgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgatttt 647  Q
    |||||||| |||| ||| |||||||| ||| ||| |||||||||||  |||||||||||||||||||||||||||||| | |||| ||||||  ||||||    
T  29682049 tgctgaag-caaatcgtgacgcgattggtgaaggtgtgacgcgattggtggataaggttgtcgtaccttgggtcgtacacttcaaccgtgacgtgatttt 29682147  T
Q  648 gggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    || |||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||| |  |||||||||||||| ||||||||    
T  29682148 ggatggcgcggcgcgattttgtctgtcaccgtgtactatttaagtgtttcagccattttttgaaggaggaagagagagaacttcacgagaggaa 29682241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 482 - 741
Target Start/End: Complemental strand, 22835547 - 22835288
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcagg 581  Q
    ||||||||||||||||||||||| ||| ||| | | ||| |||||| |||||||| | ||||||||||||||||| ||| |||  ||||||||||||| |    
T  22835547 aaactcataatcgtgacacgattatgaatggtgtgacacaattttgttggcagaacgtatggtttctgctgaaggaaaatcgtggcgcgatttgtgcatg 22835448  T
Q  582 cgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgt 681  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||| |    
T  22835447 cgtgacgcgatttatggataaggttgtcgtaccttaggtcgtacttatcaatcgtgacacgattttgggtggcgcggcgcgattttgt---tcactgtat 22835351  T
Q  682 actatttaagtgtttcagctcatttttgaagg---aagtggagagagaacttcaagagaggaa 741  Q
    ||||||||||||||||||||||||||||||||   ||   |||||||||||||||||||||||    
T  22835350 actatttaagtgtttcagctcatttttgaaggaaaaaagagagagagaacttcaagagaggaa 22835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 482 - 708
Target Start/End: Complemental strand, 32744979 - 32744747
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtgg-----cgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaa-cgtcacgcgatttg 575  Q
    ||||||||||||||||||||||| |||||||     || | |||||||||| |||||||| | |||||| ||||||||||||||| |||  | |||||||    
T  32744979 aaactcataatcgtgacacgattatgagtggtgtgacgtgacacgattttgttggcagaacgtatggttcctgctgaaggcaaaatcgtggcacgatttg 32744880  T
Q  576 tgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtca 675  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||    
T  32744879 tgcaggcgtaacgcgatttctggataaggttgtcgtacctttggtcgtactcatcaatcgtgacacgattttggatggcgtgacacgattttgtctgtca 32744780  T
Q  676 ctgtgtactatttaagtgtttcagctcattttt 708  Q
    |||||||||||||||||||||||||||||||||    
T  32744779 ctgtgtactatttaagtgtttcagctcattttt 32744747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 488 - 741
Target Start/End: Original strand, 9580911 - 9581165
Alignment:
Q  488 ataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtga 586  Q
    ||||||||| | ||||||| || |||| | |  ||||||| ||||||||||||||||||||||||||| |||| |||  |||||||| | ||||||||||    
T  9580911 ataatcgtggcgcgattttcagaggcgtggcgtgattttgctggcagaatggatggtttctgctgaag-caaatcgtggcgcgattttgggcaggcgtga 9581009  T
Q  587 cgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcga-ttttgtctgtcactgtgtacta 685  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||||  |||||||   |||||||| |||| ||||||||||||||||||||||    
T  9581010 cgcgatttatggataaggttgtcgtaccttgggtcgtacgcttcaaccgtgatgcgattttcactggcgcggtgcgatttttgtctgtcactgtgtacta 9581109  T
Q  686 tttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    ||||||||||| ||||||||||||| ||     |||||||||||||||||||||||    
T  9581110 tttaagtgtttaagctcatttttgatggggaaagagagagaacttcaagagaggaa 9581165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 520 - 741
Target Start/End: Complemental strand, 19684397 - 19684175
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| | |||||| ||||||||| |||||||| |||| |||  | |||||| | ||||||||||||| ||||||| ||||||||||||||||||||    
T  19684397 cgattttgcttgcagaacggatggtttttgctgaag-caaatcgtggcacgattttgggcaggcgtgacgcaatttatgaataaggttgtcgtaccttgg 19684299  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgatttt-gtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagt 717  Q
    ||||||| | |||| ||||||||||||||   |||||| | |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||     
T  19684298 gtcgtacgcttcaaccgtgacacgattttcactggcgcagtgcgatttttgtctgtcactgtgtactatttaagtgtttcggctcatttttgaaggaaga 19684199  T
Q  718 ggagagagaacttcaagagaggaa 741  Q
    ||||||||||||||||||||||||    
T  19684198 ggagagagaacttcaagagaggaa 19684175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 490 - 741
Target Start/End: Original strand, 760477 - 760729
Alignment:
Q  490 aatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacg 588  Q
    ||||||| | ||||||| || |||| | | |||||||| |||||||||||||||||| |||||||| |||| ||| | ||||||| |||||  |||||||    
T  760477 aatcgtggcgcgattttcagaggcgtggcgcgattttgctggcagaatggatggtttttgctgaag-caaatcgtgatgcgattttgtgcaaccgtgacg 760575  T
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgatttt-gtctgtcactgtgtactatt 687  Q
    |||||| |||||||||||||||||||||||||||||| | |||| ||| ||||||||||    ||| |   | |||||| ||||||||||||||||||||    
T  760576 cgatttgtggataaggttgtcgtaccttgggtcgtacgcttcaaccgtaacacgattttcacaggcacaatgagatttttgtctgtcactgtgtactatt 760675  T
Q  688 taagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  760676 taagtgtttcagctcatttttgaaggaagaggagagagaacttcaagagaggaa 760729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 520 - 668
Target Start/End: Original strand, 46859924 - 46860072
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcga-tttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| ||||| |||||||||||||||||||| ||||| |||  ||||| |||||||| ||||||| |||||| |||||||||| || |||||||||    
T  46859924 cgattttgctggcaaaatggatggtttctgctgaa-gcaaatcgtggcgcgattttgtgca-gcgtgacacgatttctggataaggtcgttgtaccttgg 46860021  T
Q  619 gtcgtactc-atcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
     |||||| | || || |||| | ||||||||| ||||||||| ||||||||    
T  46860022 atcgtacacaataaaccgtggcgcgattttggctggcgcggcacgattttg 46860072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 668
Target Start/End: Complemental strand, 41820268 - 41820090
Alignment:
Q  490 aatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacg 588  Q
    ||||||| | ||||||| || |||| | | |||||||| ||||||||||||||||||||||||||| |||| |||  | |||||| ||||||  |||||     
T  41820268 aatcgtggcgcgattttcagaggcgtggcgcgattttgctggcagaatggatggtttctgctgaag-caaatcgtggcacgattttgtgcagt-gtgaca 41820171  T
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtactca-tcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    |||||| | |||||||  || |||||||||||||||| || | || |||| ||||||||||| ||||||| ||||||||||    
T  41820170 cgatttctagataaggacgttgtaccttgggtcgtacacaatgaaccgtggcacgattttggctggcgcgacgcgattttg 41820090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 697
Target Start/End: Original strand, 3323255 - 3323423
Alignment:
Q  529 tggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactc 627  Q
    |||||||||||||| ||| |||||||||||||  |   |||||||| || | |||||| |||||||| |||||||||  || ||||||||||||||||      
T  3323255 tggcagaatggatgtttt-tgctgaaggcaaattgcggcgcgatttagtactggcgtggcgcgatttgtggataaggacgttgtaccttgggtcgtacgt 3323353  T
Q  628 atcaa-tcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
     | || || || ||||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||    
T  3323354 ttaaaatcatggcacgattctgacaggcgcggcgcgattt-gtctgtcactgtgtactatttaagtgtttc 3323423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 582 - 697
Target Start/End: Original strand, 6794333 - 6794448
Alignment:
Q  582 cgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgt 681  Q
    |||| |||||||| ||||||||||  | ||||||||||||||||   | ||||||| || ||||||    |||| | |||||||||||||||||||||||    
T  6794333 cgtggcgcgatttttggataaggtcattgtaccttgggtcgtacatttaaatcgtggcatgattttaacaggcgtgacgcgattttgtctgtcactgtgt 6794432  T
Q  682 actatttaagtgtttc 697  Q
    ||||| ||||||||||    
T  6794433 actatataagtgtttc 6794448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 520 - 697
Target Start/End: Complemental strand, 37466826 - 37466648
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||  |||||||||||||||||||||||||||||||| ||   | |||||| || | |||||| |||||||| ||||||| || || ||||||||     
T  37466826 cgattttcatggcagaatggatggtttctgctgaaggcaaaccgcggcacgatttagtactggcgtggcgcgatttgtggataaagtcgttgtaccttga 37466727  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    ||||||    |  | |||| | ||||| ||   |||||  | |||||||||||||||||||||||||| ||||||||||    
T  37466726 gtcgtatgtttataccgtggcgcgattctgacaggcgcaacacgattttgtctgtcactgtgtactatgtaagtgtttc 37466648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 7762011 - 7762060
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  7762011 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatt 7762060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 697
Target Start/End: Original strand, 3327973 - 3328089
Alignment:
Q  580 ggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaa-tcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactg 678  Q
    |||||| |||||||| |||||||||  || |||||||||||| |||   | || ||||| ||||||| ||   ||||||||||||||| |||||||||||    
T  3327973 ggcgtggcgcgatttgtggataaggacgttgtaccttgggtcatacgtttaaaatcgtggcacgattctgacaggcgcggcgcgattt-gtctgtcactg 3328071  T
Q  679 tgtactatttaagtgtttc 697  Q
     ||||||||||||||||||    
T  3328072 -gtactatttaagtgtttc 3328089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 650
Target Start/End: Complemental strand, 31340681 - 31340627
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttggg 650  Q
    ||||||||||| |||||||||||||||||| || ||| |||||||||||||||||    
T  31340681 ggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattttggg 31340627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 7764199 - 7764248
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  7764199 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacatgatt 7764248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 648
Target Start/End: Original strand, 27986109 - 27986161
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||||    
T  27986109 ggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgattttg 27986161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 21711655 - 21711605
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  21711655 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 21711605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 33386308 - 33386358
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||    
T  33386308 ggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgattt 33386358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 37408206 - 37408256
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||| ||||||||    
T  37408206 ggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgattt 37408256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 37726128 - 37726078
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||| |||||||||||  |||||||||||||||||||    
T  37726128 ggataaggttggtcgtacattgggtcgtacgtatcaatcgtgacacgattt 37726078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 40734245 - 40734295
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||    
T  40734245 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtgtcacgattt 40734295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 47923536 - 47923586
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||| |||| ||||||||||| ||||||||    
T  47923536 ggataaggttggtcgtaccttgggttgtacgcatcaatcgtgtcacgattt 47923586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 9636549 - 9636500
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  9636549 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 9636500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 45094911 - 45094960
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  45094911 ggataaggttggtcgtaccttggaacgtacgcatcaatcgtgacacgatt 45094960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 449 - 741
Target Start/End: Original strand, 42361942 - 42362234
Alignment:
Q  449 tgttgtaatttgccttcaaattagtgttgctggaaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttct 548  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42361942 tgttgtaatttgccttcaaattagtgttgctgaaaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttct 42362041  T
Q  549 gctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    |||||||||||||| | ||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42362042 gctgaaggcaaaacatgacgagattggtgcaggcgtgacgcgatttgtggataacgttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttg 42362141  T
Q  649 ggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  42362142 ggtagcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagatgagagagaacttcaagagaggaa 42362234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 482 - 741
Target Start/End: Original strand, 11690123 - 11690383
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcagg 581  Q
    |||||||||||| |||||||||| ||| ||||  | ||||||||||  |||| || | ||||||||||  ||||| ||| |||   | ||||||||||||    
T  11690123 aaactcataatcatgacacgattatgaatggcatgacacgattttgtcggcataacgtatggtttctgtcgaaggaaaatcgtggtgggatttgtgcagg 11690222  T
Q  582 cgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgt 681  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  11690223 cgtgacacgatttattgataaggttgtcgtaccttggatcgtactcatcaatcgtgacacgattttgggtggcgtggtgcga-tttgtctgtcattgtgt 11690321  T
Q  682 actatttaagtgtttcagctcatttttgaaggaagtg--gagagagaacttcaagagaggaa 741  Q
    ||||||||||||||||| ||||||||| || | || |  |||||||||||||||||||||||    
T  11690322 actatttaagtgtttcaactcattttttaaaggagagaagagagagaacttcaagagaggaa 11690383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 499 - 733
Target Start/End: Complemental strand, 724272 - 724038
Alignment:
Q  499 acgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatg 597  Q
    |||||||| ||||||| | | |||||||| ||| ||||||||||||||||| ||||| |||| |||  |||||||| ||| ||| ||||| |||||| ||    
T  724272 acgattttcagtggcgtggcgcgattttgctggtagaatggatggtttctgttgaag-caaatcgtggcgcgattttgtgtaggtgtgacacgatttgtg 724174  T
Q  598 gataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    |||||| ||||||||||||||||||||| | |||| |||| | |||||||   ||||||| |||||||||||||||||||||||||||||||||||||||    
T  724173 gataagattgtcgtaccttgggtcgtacgcttcaaccgtggcgcgattttcactggcgcgacgcgattttgtctgtcactgtgtactatttaagtgtttc 724074  T
Q  698 agctcatttttgaaggaagtggagagagaacttcaa 733  Q
    |||||||||||||| |||| ||||||||||||||||    
T  724073 agctcatttttgaaagaagaggagagagaacttcaa 724038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 520 - 741
Target Start/End: Complemental strand, 11152099 - 11151877
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttggg 619  Q
    ||||||||||||||||||||||||||||||||||||||||| | |   |||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  11152099 cgattttggtggcagaatggatggtttctgctgaaggcaaatcatggtgcgattggtgcaggcgtgacgcggtttgtggataaggttgtcgtaccttggg 11152000  T
Q  620 tcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaag-tg 718  Q
    ||| || | ||||  ||| | |||||||   ||||||  ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |       
T  11151999 tcgcacgcttcaactgtggcgcgattttcactggcgcatcgcgattttgtctatcactgtgtactctttaagtgtttcagctcatttttgaaggaggaaa 11151900  T
Q  719 gagagagaacttcaagagaggaa 741  Q
    |||||||||||||||||||||||    
T  11151899 gagagagaacttcaagagaggaa 11151877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 520 - 737
Target Start/End: Complemental strand, 14634332 - 14634116
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||| ||| ||||| ||||||||||||||||||||| |||  |||  |||||||| ||||||| ||| |||||||| |||||||||||||||||||||||    
T  14634332 cgatcttgctggcaaaatggatggtttctgctgaag-caagtcgtggcgcgattttgtgcaggtgtgtcgcgatttgtggataaggttgtcgtaccttgg 14634234  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtg 718  Q
    ||||||| | |||| |||| | | |||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| |    
T  14634233 gtcgtacgcttcaaccgtggcgc-attttcattggcgcggcgcgattttgtctgtcactgtgtcctatttaagtgtttcagctcattttttaagaaagag 14634135  T
Q  719 gagagagaacttcaagaga 737  Q
    |||||||||||||||||||    
T  14634134 gagagagaacttcaagaga 14634116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 520 - 741
Target Start/End: Complemental strand, 34140278 - 34140057
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| | ||||||| ||||||||||||||||| |||| | |  ||| |||| || |||||| |||||||||| |||||||||||||||||||||||    
T  34140278 cgattttgctagcagaattgatggtttctgctgaag-caaatcatggcgcaattttgtacaggcgcgacgcgatttgtggataaggttgtcgtaccttgg 34140180  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtg 718  Q
    ||||||| | |||| |||  | |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  34140179 gtcgtacgcttcaaccgtagcgcgatttttactggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggagtaa 34140080  T
Q  719 gagagagaacttcaagagaggaa 741  Q
    |||| ||||||||||||||||||    
T  34140079 gagatagaacttcaagagaggaa 34140057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 651 - 741
Target Start/End: Complemental strand, 14202783 - 14202693
Alignment:
Q  651 tggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14202783 tggcgcagtgcgattttgtctgtcactgtgtactacttaagtgtttcagctcatttttgaaggaagaggagagagaacttcaagagaggaa 14202693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 2334838 - 2334788
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2334838 ggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgattt 2334788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 28258821 - 28258871
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  28258821 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattt 28258871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 5723675 - 5723626
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  5723675 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 5723626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 36988496 - 36988447
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  36988496 ggataaggttggtcgtaccttgggtcgtacgcatcaattgtgacacgatt 36988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 668
Target Start/End: Complemental strand, 42288822 - 42288675
Alignment:
Q  521 gattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttggg 619  Q
    ||||||| ||| ||||||||||||||||| ||||| |||| |||  || ||||| |||||  | |||| |||||| | ||||||||||| ||||||||||    
T  42288822 gattttgctggtagaatggatggtttctgttgaag-caaatcgtggcgtgattttgtgcat-catgacacgatttcttgataaggttgttgtaccttggg 42288725  T
Q  620 tcgtactc-atcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    |||||| | || || |||| | ||||||||| || |||| ||||||||||    
T  42288724 tcgtacacaatgaaccgtggcgcgattttggctgacgcgacgcgattttg 42288675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 697
Target Start/End: Original strand, 10445168 - 10445210
Alignment:
Q  654 cgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  10445168 cgcggcgcgattt-gtttgtcactgtgtactatttaagtgtttc 10445210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 555
Target Start/End: Complemental strand, 14202882 - 14202847
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaag 555  Q
    |||||||| |||||||||||||||||||||||||||    
T  14202882 cgattttgctggcagaatggatggtttctgctgaag 14202847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 555
Target Start/End: Complemental strand, 14635254 - 14635199
Alignment:
Q  500 cgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaag 555  Q
    ||||||| || |||| | |||||||||| |||||||||||||||||| ||||||||    
T  14635254 cgattttcagaggcgtggcacgattttgctggcagaatggatggtttatgctgaag 14635199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 34389304 - 34389254
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  34389304 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 34389254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 13569783 - 13569734
Alignment:
Q  597 ggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    |||||||||||||||||||||| |||||  || |||||||| ||||||||    
T  13569783 ggataaggttgtcgtaccttggatcgtaagcaccaatcgtgtcacgattt 13569734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 2e-91; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 482 - 741
Target Start/End: Complemental strand, 28137955 - 28137694
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcagg 581  Q
    ||||||||||||||||||||||| ||| ||||| | |||||||||| |||||||| | ||||||||||||||||| |||  ||  | |||||||||||||    
T  28137955 aaactcataatcgtgacacgattatgaatggcgtgacacgattttgttggcagaacgtatggtttctgctgaaggaaaattgtggcacgatttgtgcagg 28137856  T
Q  582 cgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgt 681  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||||||    
T  28137855 cgtgatgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttggatggcgcgacgctattttgtcagtcactgtgt 28137756  T
Q  682 actatttaagtgtttcagctcatttttgaaggaagtg--gagagagaacttcaagagaggaa 741  Q
    |||||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||    
T  28137755 actatttaagtgtttcagctcatttttgaagggagaggagagagagaacttcaagagaggaa 28137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 490 - 741
Target Start/End: Original strand, 16566838 - 16567088
Alignment:
Q  490 aatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacg 588  Q
    ||||||| ||||||||| || |||| | ||||||||||   | ||||||||||||||||||||||| |||| |||  |||||||| |||||  | |||||    
T  16566838 aatcgtggcacgattttcagaggcgtggcacgattttgc--gaagaatggatggtttctgctgaag-caaatcgtggcgcgattttgtgcaaccatgacg 16566934  T
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgatttt-gtctgtcactgtgtactatt 687  Q
    |||||| ||||| |||||||||||||||||||||||| | |||| |||| | | |||||    |||| ||||||||||| ||||||||||||||||||||    
T  16566935 cgatttgtggatgaggttgtcgtaccttgggtcgtacgcttcaaccgtggcgcaattttcctaggcgtggcgcgatttttgtctgtcactgtgtactatt 16567034  T
Q  688 taagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    |||||| ||||||||||||||||| || | ||||||||||||||||||||||||    
T  16567035 taagtgcttcagctcatttttgaatgaggaggagagagaacttcaagagaggaa 16567088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 520 - 741
Target Start/End: Original strand, 16568703 - 16568925
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| || |||||| ||||||||||||||||| |||| |||  |||||||| |||||  |||||||| |||| |||||||||||||||||||||||    
T  16568703 cgattttgctgccagaatagatggtttctgctgaag-caaatcgtggcgcgattttgtgcaaccgtgacgcaatttgtggataaggttgtcgtaccttgg 16568801  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttg-tctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagt 717  Q
    ||||||| | ||||  ||| | |||||||    ||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| |     
T  16568802 gtcgtacgcttcaactgtggcgcgattttcctaggcacggcgcgatttttatctgtaactgtgtactatttaagtgtttcagctcatttttgaaggagga 16568901  T
Q  718 ggagagagaacttcaagagaggaa 741  Q
     ||||||||||| |||||||||||    
T  16568902 tgagagagaactacaagagaggaa 16568925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 482 - 668
Target Start/End: Original strand, 5043043 - 5043229
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcagg 581  Q
    ||||||||||| ||||||||||| ||||||||| | ||| |||||| |||||||| | ||||||||||||||||||||| |||   ||||||||||||||    
T  5043043 aaactcataattgtgacacgattatgagtggcgtgacacaattttgttggcagaacgtatggtttctgctgaaggcaaatcgtggtgcgatttgtgcagg 5043142  T
Q  582 cgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||| | |||| | || | ||||||||| ||||||  ||||||||||    
T  5043143 cgtgacgcgatttgtggataaggttatcgtaccttggatcgtacgcttcaaccatggcgcgattttggctggcgcaacgcgattttg 5043229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 597 - 648
Target Start/End: Complemental strand, 9183431 - 9183379
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  9183431 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattttg 9183379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 645
Target Start/End: Complemental strand, 5407328 - 5407280
Alignment:
Q  598 gataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5407328 gataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatt 5407280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 650
Target Start/End: Complemental strand, 26954724 - 26954670
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttggg 650  Q
    ||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||    
T  26954724 ggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgattttggg 26954670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 625
Target Start/End: Complemental strand, 2973654 - 2973551
Alignment:
Q  521 gattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttggg 619  Q
    ||||||| ||||| | |||||||||||| |||| | |||| |||  |||||||| |||||| |||||| |||||| |||||||||| || ||||||||||    
T  2973654 gattttgttggcatagtggatggtttctactgacg-caaatcgtggcgcgattttgtgcag-cgtgacacgatttctggataaggtcgttgtaccttggg 2973557  T
Q  620 tcgtac 625  Q
    ||||||    
T  2973556 tcgtac 2973551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 5406619 - 5406570
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  5406619 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 5406570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 5410944 - 5410895
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  5410944 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 5410895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 5413869 - 5413820
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  5413869 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 5413820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 648
Target Start/End: Original strand, 5571918 - 5571959
Alignment:
Q  607 gtcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  5571918 gtcgtaccttgggtcgtacgcaccaatcgtgacacgattttg 5571959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 16452861 - 16452812
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  16452861 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 16452812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 697
Target Start/End: Complemental strand, 31936973 - 31936928
Alignment:
Q  652 ggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||    
T  31936973 ggcgcggcgcgatttcgactgtcactgtgtactatataagtgtttc 31936928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 33160775 - 33160726
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  33160775 ggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgatt 33160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 645
Target Start/End: Complemental strand, 5411653 - 5411605
Alignment:
Q  598 gataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  5411653 gataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 5411605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 5017139 - 5017189
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  5017139 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 5017189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 10076834 - 10076884
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  10076834 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 10076884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 18234537 - 18234487
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  18234537 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 18234487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 31086116 - 31086166
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  31086116 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 31086166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 16452750 - 16452701
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| |||||||| || |||||||    
T  16452750 ggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcacgatt 16452701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 30834958 - 30834909
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  30834958 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 30834909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 31405095 - 31405046
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||| |||||||| ||||||||||| |||||||    
T  31405095 ggataaggttggtcgtaccttaggtcgtacgcatcaatcgtggcacgatt 31405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 8e-91; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 449 - 741
Target Start/End: Original strand, 6598561 - 6598854
Alignment:
Q  449 tgttgtaatttgccttcaaattagtgttgctggaaactcata-atcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttc 547  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||     
T  6598561 tgttgtaatttgccttcaaattagtgttgctggaaactcacatatcgtgatacgattttgagtggcacgtcacgattttggtggcagaatgggtggttta 6598660  T
Q  548 tgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgatttt 647  Q
    ||||||||||||| |||  ||||||| ||||||| |||||||||||| |||||||||||||||||||||| | | ||| | |||| |||| | |||||||    
T  6598661 tgctgaaggcaaatcgtggcgcgattggtgcaggtgtgacgcgatttgtggataaggttgtcgtaccttgcgccatacgcttcaaccgtggcgcgatttt 6598760  T
Q  648 gggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
       ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||    
T  6598761 ctctggcgcggcgcgattttgtttgtcactatgtactatttaagtgtttcagctcatttttgagtagaggggagagagaacttcaagagaggaa 6598854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 449 - 741
Target Start/End: Original strand, 6674014 - 6674307
Alignment:
Q  449 tgttgtaatttgccttcaaattagtgttgctggaaactcata-atcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttc 547  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||     
T  6674014 tgttgtaatttgccttcaaattagtgttgctggaaactcacatatcgtgatacgattttgagtggcacgtcacgattttggtggcagaatgggtggttta 6674113  T
Q  548 tgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgatttt 647  Q
    ||||||||||||| |||  ||||||| ||||||| |||||||||||| |||||||||||||||||||||| | | ||| | |||| |||| | |||||||    
T  6674114 tgctgaaggcaaatcgtggcgcgattggtgcaggtgtgacgcgatttgtggataaggttgtcgtaccttgcgccatacgcttcaaccgtggcgcgatttt 6674213  T
Q  648 gggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
       ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||    
T  6674214 ctctggcgcggcgcgattttgtttgtcactatgtactatttaagtgtttcagctcatttttgagtagaggggagagagaacttcaagagaggaa 6674307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 596 - 741
Target Start/End: Complemental strand, 41365280 - 41365133
Alignment:
Q  596 tggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtt 695  Q
    |||||||||||||||||||||||||| ||| | |||| |||| | |||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  41365280 tggataaggttgtcgtaccttgggtcatacgcttcaaccgtggcgcgattttctctggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtt 41365181  T
Q  696 tcagctcatttttgaag--gaagtggagagagaacttcaagagaggaa 741  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||    
T  41365180 tcagctcatttttgaagaaaaagtggagagagaacttcaagagaggaa 41365133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 535 - 708
Target Start/End: Complemental strand, 1292946 - 1292772
Alignment:
Q  535 aatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaat 633  Q
    |||||||||||||||||||||| ||| | |  |||||||| ||  ||||||||| |||||| ||||||| |||||||||||||||||||||| ||| |||    
T  1292946 aatggatggtttctgctgaaggaaaatcatggcgcgatttcgtataggcgtgacacgatttctggataaagttgtcgtaccttgggtcgtacgcataaat 1292847  T
Q  634 cgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcattttt 708  Q
     ||| | ||||||| |  |||| ||||||||||||||||||| |||||||| || || ||||||| |||||||||    
T  1292846 tgtggcgcgattttcgtaggcgtggcgcgattttgtctgtcattgtgtactgttaaaatgtttcaactcattttt 1292772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 456 - 620
Target Start/End: Original strand, 5990083 - 5990248
Alignment:
Q  456 atttgccttcaaattagtgttgctggaaact-cataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaa 554  Q
    ||||| |||||||||||||||  | |||| | |||||||||||||||||| || | |||| ||| ||||||| | ||||| | | ||||||| | |||||    
T  5990083 atttgacttcaaattagtgttcttagaaagttcataatcgtgacacgattatg-gaggcgtgtcgcgattttcgaggcaggaagcatggtttttcctgaa 5990181  T
Q  555 ggcaaaacgtcacgcgatttgtg-caggcgtgacgcgatttatggataaggttgtcgtaccttgggt 620  Q
    |||||| ||| || ||||||||| |||||||||| |||||||||||||||||||| |||| ||||||    
T  5990182 ggcaaatcgtgacacgatttgtggcaggcgtgacacgatttatggataaggttgttgtacattgggt 5990248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 529 - 697
Target Start/End: Original strand, 19751969 - 19752139
Alignment:
Q  529 tggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtac-t 626  Q
    |||||||||||||| ||| ||||||||||||| ||   |||||||| || | |||||| |||||||  ||||||||| ||| |||||||||||||||| |    
T  19751969 tggcagaatggatgtttt-tgctgaaggcaaatcgcggcgcgatttagtactggcgtggcgcgattggtggataaggatgttgtaccttgggtcgtacgt 19752067  T
Q  627 catcaatcgtgacacga-ttttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
     |  ||||||| ||||| |||| |  ||||||||||||||| |||||||| |||||||||| ||||||||||    
T  19752068 taaaaatcgtggcacgatttttagcaggcgcggcgcgatttcgtctgtcattgtgtactatataagtgtttc 19752139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 41365374 - 41365296
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaa 560  Q
    ||||||||||||||||||||||| ||| | ||| | |||||||||| |||||||| | ||||||||||||||||| |||    
T  41365374 aaactcataatcgtgacacgattatgaattgcgtgacacgattttgttggcagaacgtatggtttctgctgaaggaaaa 41365296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 34254749 - 34254700
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  34254749 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 34254700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 648
Target Start/End: Original strand, 4696271 - 4696323
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    ||||||||||| |||||||||||||||||| || ||| |||||||||||||||    
T  4696271 ggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattttg 4696323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 648
Target Start/End: Complemental strand, 19945760 - 19945708
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||    
T  19945760 ggataaggttgatcgtaccttggatcgtacgcatcaatcgtggcacgattttg 19945708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 10014906 - 10014956
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||  ||||||||||| ||||||||    
T  10014906 ggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacgattt 10014956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 42497962 - 42498012
Alignment:
Q  597 ggataaggtt-gtcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||| |||||    
T  42497962 ggataaggttagtcgtaccttgggtcctacgcatcaatcgtgacatgattt 42498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 1746639 - 1746590
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  1746639 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 1746590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 17982400 - 17982449
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  17982400 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 17982449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 31218004 - 31218053
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  31218004 ggataaggttggtcgtaccttggatcatacgcatcaatcgtgacacgatt 31218053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 1e-89; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 482 - 741
Target Start/End: Complemental strand, 5887961 - 5887702
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcagg 581  Q
    ||||||||||||||||||||||| ||| |||||   |||||||||| |||||||| | ||||||||||||||||| ||| |||   ||||||||||||||    
T  5887961 aaactcataatcgtgacacgattatgaatggcgtagcacgattttgttggcagaacgtatggtttctgctgaaggaaaatcgtggtgcgatttgtgcagg 5887862  T
Q  582 cgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgt 681  Q
     |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  5887861 tgtgacgcgatttatggataaggttgtcgtaacttgggtcgtactcatcaatcgtgacacggttttgggtggcgcggtgcgattttgtcagtcactgtgt 5887762  T
Q  682 actatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    ||||||||||||||| ||||||||||||||||  | | ||||||||||||||||||||||    
T  5887761 actatttaagtgttttagctcatttttgaagggtgagaagagagaacttcaagagaggaa 5887702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 523 - 741
Target Start/End: Original strand, 31182636 - 31182855
Alignment:
Q  523 ttttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtc 621  Q
    ||||| ||||| |||||||||||| |||||||| |||| |||  |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  31182636 ttttgctggcataatggatggtttttgctgaag-caaatcgtggcgcgattttgtgcaggagtgacgcgatttgtggataaggttgtcgtaccttgggtc 31182734  T
Q  622 gtactcatcaatcgtgacacgattttgggtggcgcggcgcgatttt-gtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtgga 720  Q
    |||| | |||| |||| | |||||||    ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  31182735 gtacgcttcaaccgtggcgcgattttcacaggcgcagcgcgatttttgtctgtcactgtgtactatttaagtgtttcatctcattttttaaggaagagga 31182834  T
Q  721 gagagaacttcaagagaggaa 741  Q
    |||||||||||||||||||||    
T  31182835 gagagaacttcaagagaggaa 31182855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 572 - 741
Target Start/End: Complemental strand, 8566392 - 8566233
Alignment:
Q  572 tttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtct 671  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||| |||  |||         |||||||||||||||||||||    
T  8566392 tttgtgcaggcgtgacgcaatttgtggataaggttgtcgtaccttgggtcgtacgcttcaaccgtt-cac---------tggcgcggcgcgattttgtct 8566303  T
Q  672 gtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  8566302 gtcactgtgtactatttaagtgtttcagctcatttttgaagatagaggagagagaacttcaagagaggaa 8566233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 656 - 741
Target Start/End: Original strand, 33831476 - 33831562
Alignment:
Q  656 cggcgcgatttt-gtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  33831476 cggcgcgatttttgtctgtcactgtgtactatttaagcgtttcagctcattttttaaggaagaggagagagaacttcaaaagaggaa 33831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 710
Target Start/End: Original strand, 16451730 - 16451942
Alignment:
Q  500 cgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcga-tttgtgcaggcgtgacgcgatttatgg 598  Q
    |||||||| | |||| ||| |||||||  |||||||||||||||||||||||||||  | | |||  ||||| ||||| ||||||||||||||||| |||    
T  16451730 cgattttgggaggcgtgtcgcgattttcttggcagaatggatggtttctgctgaagaaatatcgtggcgcgattttgtacaggcgtgacgcgatttctgg 16451829  T
Q  599 ataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacga-ttttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    |||||| ||| |||| ||||||| ||| | | |||||||  |||| ||||    |||||| | ||||||||| ||||||||||| |||| ||||  ||||    
T  16451830 ataaggctgttgtacattgggtcatacgcttaaatcgtggtacgatttttcacaggcgcgacacgattttgtttgtcactgtgttctatataagcatttc 16451929  T
Q  698 agctcatttttga 710  Q
    || ||||||||||    
T  16451930 agttcatttttga 16451942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 587 - 697
Target Start/End: Complemental strand, 28832706 - 28832596
Alignment:
Q  587 cgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaa-tcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtacta 685  Q
    |||||||| |||||||||| || ||||||||||||||||   | || ||||| ||||||| |||  |||||| |||||||| |||| |||||||||||||    
T  28832706 cgcgatttgtggataaggtcgttgtaccttgggtcgtacgtttaaaatcgtggcacgattctggcaggcgcgacgcgattt-gtctatcactgtgtacta 28832608  T
Q  686 tttaagtgtttc 697  Q
    ||||||||||||    
T  28832607 tttaagtgtttc 28832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 697
Target Start/End: Original strand, 24553102 - 24553270
Alignment:
Q  529 tggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactc 627  Q
    |||||||||||||| ||| ||||||||||||| |||  |  ||||| || |  ||||| |||||||| |||||||||  || ||||||||||||||||      
T  24553102 tggcagaatggatgtttt-tgctgaaggcaaatcgtggcatgatttagtactagcgtggcgcgatttgtggataaggccgttgtaccttgggtcgtacgt 24553200  T
Q  628 atcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
     |  | |||| | ||||| ||   ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  24553201 ttataccgtggcgcgattctgacaggcgcggcgcgatttcgtctgtcactgtgtactatataagtgtttc 24553270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 490 - 668
Target Start/End: Complemental strand, 27638359 - 27638181
Alignment:
Q  490 aatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcga-tttgtgcaggcgtgacg 588  Q
    ||||||| | ||||||| || |||| | |||||||||| |||||||||||||||||||||  ||| |||||  ||  ||||| |||||||| |||||||     
T  27638359 aatcgtgtcgcgattttcagaggcgtggcacgattttgctggcagaatggatggtttctgtcgaa-gcaaattgtggcgcgattttgtgca-gcgtgaca 27638262  T
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtactc-atcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    |||||| | ||||||||  | |||||||||||||||| | || || |||| | ||||||||| |||||||  |||||||||    
T  27638261 cgatttctagataaggtcattgtaccttgggtcgtacacaatgaaccgtggcgcgattttggctggcgcgatgcgattttg 27638181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 13239499 - 13239548
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13239499 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatt 13239548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 529 - 697
Target Start/End: Original strand, 31300171 - 31300339
Alignment:
Q  529 tggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttg-tgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactc 627  Q
    |||||||||||||| ||| |||||||||||||  |   ||||||||| | | |||||| |||||||  |||||||||  || ||| ||||||||||||      
T  31300171 tggcagaatggatgtttt-tgctgaaggcaaattgcagcgcgatttggtactggcgtggcgcgattggtggataaggacgttgtatcttgggtcgtacgt 31300269  T
Q  628 atcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
     | |||||||  ||||||||    |||||||||| |||| ||||||||||||||||||| |||| |||||    
T  31300270 ttaaatcgtggtacgattttaacaggcgcggcgccatttcgtctgtcactgtgtactatataagggtttc 31300339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 37438893 - 37438942
Alignment:
Q  597 ggataaggtt-gtcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  37438893 ggataaggtttgtcgtaccttgggtcgtacgcatcaatcgtgacacgatt 37438942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 697
Target Start/End: Original strand, 17003658 - 17003703
Alignment:
Q  652 ggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||    
T  17003658 ggcgcggcgcgatttcgtctttcactgtgtactatataagtgtttc 17003703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 697
Target Start/End: Original strand, 42127068 - 42127113
Alignment:
Q  652 ggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||    
T  42127068 ggcgcggcgcgatttcgtctgtcactgtgtactatacaagtgtttc 42127113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 9352978 - 9353028
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||| ||||||||    
T  9352978 ggataaggttggtcgtaccttgggtcgtacatatcaatcgtggcacgattt 9353028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 14520683 - 14520633
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| ||||||||    
T  14520683 ggataaggttggtcgtaccttgggtcgtacgcattaatcgtgtcacgattt 14520633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 36931993 - 36932043
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||| ||||    
T  36931993 ggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaattt 36932043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 25412509 - 25412558
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  25412509 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 25412558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 30182335 - 30182384
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  30182335 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 30182384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 648
Target Start/End: Original strand, 40146819 - 40146860
Alignment:
Q  607 gtcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    |||||||||||||||||||||| ||| |||| ||||||||||    
T  40146819 gtcgtaccttgggtcgtactcaccaaacgtgtcacgattttg 40146860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 6e-67; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 490 - 741
Target Start/End: Complemental strand, 8551325 - 8551073
Alignment:
Q  490 aatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacg 588  Q
    ||||||| | ||||||| || |||| | | |||||||| ||||||||||||||||||||||||||| |||| |||  | |||||| |||||| |||||||    
T  8551325 aatcgtggcgcgattttcagaggcgtggcgcgattttgctggcagaatggatggtttctgctgaag-caaatcgtggcacgattttgtgcagccgtgacg 8551227  T
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgatttt-gtctgtcactgtgtactatt 687  Q
    |||||| |||||||||||||||||||||||||||||| | |||| |||| | |||||||    |||||| ||||||||| ||||||||||||||||||||    
T  8551226 cgatttgtggataaggttgtcgtaccttgggtcgtacgcttcaaccgtggcgcgattttcctaggcgcgacgcgatttttgtctgtcactgtgtactatt 8551127  T
Q  688 taagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8551126 taagtgtttcagctcatttttgaaggaagaggagagagaacttcaagagaggaa 8551073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 520 - 708
Target Start/End: Complemental strand, 40122704 - 40122516
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttggg 619  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | ||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  40122704 cgattttggtggcagaatggatggtttctgctgaaggcaaatcgtggcacgattggtgcaggcgtgacacgatttgtggataaggttgtcgtaccttggg 40122605  T
Q  620 tcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcattttt 708  Q
    |||||| | |||| |||| | |||||||   | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40122604 tcgtacgcttcaaccgtggcgcgattttcactagcgcgacgcgattttgtctgtcactgtgtactatttaagtgttccagctcattttt 40122516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 520 - 733
Target Start/End: Complemental strand, 834659 - 834461
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatt-tgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| ||||||||||||||||||||||| ||| |||| |||  ||||||| |||||||||||||| |||||| |||||||||||||||||||||||    
T  834659 cgattttgctggcagaatggatggtttctgctaaag-caaatcgtggcgcgattctgtgcaggcgtgacacgatttgtggataaggttgtcgtaccttgg 834561  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtg 718  Q
    ||||||| | |||| ||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  834560 gtcgtacgcttcaaccgtg---------------gcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagat 834476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 500 - 668
Target Start/End: Original strand, 37167733 - 37167897
Alignment:
Q  500 cgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatgga 599  Q
    ||||||| ||||||| | |||||||||| |||||||| | ||||||||||||||||||||| |||  ||||||| ||||||| ||     ||||| ||||    
T  37167733 cgattttcagtggcgtgacacgattttgttggcagaacgtatggtttctgctgaaggcaaatcgtggcgcgattggtgcaggtgt-----gatttgtgga 37167827  T
Q  600 taaggttgtcgtaccttgggtcgtactcatcaatcgtgacacga-ttttgggtggcgcggcgcgattttg 668  Q
    |||||||||||||||||||||||||| | ||||  ||| | ||| |||||| |||||| |||||||||||    
T  37167828 taaggttgtcgtaccttgggtcgtacgcttcaactgtggcgcgatttttggctggcgcagcgcgattttg 37167897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 520 - 668
Target Start/End: Original strand, 47114626 - 47114774
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| ||| ||||||||||||||||||||||| |||| | |  |||||||| |||||| |||||| |||||| ||||||||| ||| |||||||||    
T  47114626 cgattttgctggtagaatggatggtttctgctgaag-caaatcatggcgcgattttgtgcag-cgtgacacgatttttggataaggctgttgtaccttgg 47114723  T
Q  619 gtcgtactc-atcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    ||||||| | || || |||| | ||||||||| | ||||||||||||||||    
T  47114724 gtcgtacacaatgaaccgtggcgcgattttggctagcgcggcgcgattttg 47114774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 580 - 697
Target Start/End: Original strand, 47098451 - 47098569
Alignment:
Q  580 ggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaa-tcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactg 678  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||   | || ||||| | ||||| ||   ||||||||||||||| |||||||||||    
T  47098451 ggcgtggcgcaatttatggataaggtcgttgtaccttgggtcgtacgtttaaaatcgtggcgcgattctgacaggcgcggcgcgatttcgtctgtcactg 47098550  T
Q  679 tgtactatttaagtgtttc 697  Q
    |||||||| ||||||||||    
T  47098551 tgtactatataagtgtttc 47098569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 520 - 625
Target Start/End: Complemental strand, 7482946 - 7482842
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| ||||||||||||||||||||||||||| |||| | |  |||||||| ||||||  ||||| |||||| |||||||||| || |||||||||    
T  7482946 cgattttgctggcagaatggatggtttctgctgaag-caaatcatggcgcgattttgtgcagt-gtgacacgatttctggataaggtcgttgtaccttgg 7482849  T
Q  619 gtcgtac 625  Q
    |||||||    
T  7482848 gtcgtac 7482842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 589 - 697
Target Start/End: Complemental strand, 32889901 - 32889791
Alignment:
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtactcatcaa-tcgtgacacgattttgggt-ggcgcggcgcgattttgtctgtcactgtgtactat 686  Q
    |||||| |||||||||| || |||||||||||||||| | | || ||||| |||||||||  |  ||||||||| ||||| |||||||||||||||||||    
T  32889901 cgatttgtggataaggtcgttgtaccttgggtcgtacgcttaaaatcgtggcacgatttttagcaggcgcggcgtgatttcgtctgtcactgtgtactat 32889802  T
Q  687 ttaagtgtttc 697  Q
     ||||||||||    
T  32889801 ataagtgtttc 32889791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 609
Target Start/End: Complemental strand, 3847535 - 3847446
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcga-tttgtgcaggcgtgacgcgatttatggataaggttgtc 609  Q
    |||||||| ||||||||||||| |||||||||||||| ||| | |  ||||| ||||||| |||||| |||||||| ||||||||||||||    
T  3847535 cgattttgctggcagaatggatagtttctgctgaagg-aaatcatggcgcgattttgtgcgggcgtggcgcgatttgtggataaggttgtc 3847446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 631 - 697
Target Start/End: Original strand, 27104080 - 27104145
Alignment:
Q  631 aatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    ||||||| ||||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27104080 aatcgtggcacgattctgacaggcgcggcgcgattt-gtctgtcactgtgtactatttaagtgtttc 27104145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 697
Target Start/End: Original strand, 47102465 - 47102583
Alignment:
Q  580 ggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtac-tcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactg 678  Q
    |||||| |||||||| |||||||||| || |||||||||||||||| |    ||||||| ||||||| ||   |||||| | |||||| |||||||| ||    
T  47102465 ggcgtggcgcgatttgtggataaggtcgttgtaccttgggtcgtacgtttaaaatcgtggcacgattctgacaggcgcgacccgatttcgtctgtcagtg 47102564  T
Q  679 tgtactatttaagtgtttc 697  Q
    |||||||| ||||||||||    
T  47102565 tgtactatataagtgtttc 47102583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 581 - 697
Target Start/End: Complemental strand, 9476732 - 9476615
Alignment:
Q  581 gcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatc-aatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgt 679  Q
    ||||| |||||||  |||||||||| || ||||||||||||||||   |  ||||||| ||||||| ||   | ||||||||||||| | ||||||||||    
T  9476732 gcgtggcgcgattcgtggataaggtcgttgtaccttgggtcgtacgtttagaatcgtggcacgattctgacagacgcggcgcgatttcgcctgtcactgt 9476633  T
Q  680 gtactatttaagtgtttc 697  Q
    ||||||| ||||||||||    
T  9476632 gtactatataagtgtttc 9476615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 625
Target Start/End: Complemental strand, 34603032 - 34602930
Alignment:
Q  522 attttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcga-tttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggt 620  Q
    |||||| ||| |||||||||||||||||||||| |||||  ||  ||||| |||||||| ||||||| | |||| |||||||||| || |||||||||||    
T  34603032 attttgctggtagaatggatggtttctgctgaa-gcaaattgtggcgcgattttgtgca-gcgtgacacaatttctggataaggtcgttgtaccttgggt 34602935  T
Q  621 cgtac 625  Q
    |||||    
T  34602934 cgtac 34602930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 13604266 - 13604316
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  13604266 ggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgattt 13604316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 533 - 625
Target Start/End: Original strand, 34603062 - 34603153
Alignment:
Q  533 agaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtac 625  Q
    ||||||||||||||||||||||| ||||  ||  |||||||| |||||| |||||| | |||| |||||||||| || ||||||||||||||||    
T  34603062 agaatggatggtttctgctgaag-caaatagtggcgcgattttgtgcag-cgtgacacaatttctggataaggtcgttgtaccttgggtcgtac 34603153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 665 - 697
Target Start/End: Complemental strand, 197262 - 197230
Alignment:
Q  665 tttgtctgtcactgtgtactatttaagtgtttc 697  Q
    |||||||||||||||||||||||||||||||||    
T  197262 tttgtctgtcactgtgtactatttaagtgtttc 197230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 608 - 646
Target Start/End: Original strand, 16455405 - 16455443
Alignment:
Q  608 tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  16455405 tcgtaccttgggtcgtacgcatcaaccgtgacacgattt 16455443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 29652267 - 29652217
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  29652267 ggataaggttggtcgtaccttgggtcgtacacaccaatcgtgtcacgattt 29652217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 37070221 - 37070171
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  37070221 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgattt 37070171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 5e-58; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 520 - 741
Target Start/End: Complemental strand, 38671729 - 38671508
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| |||||||||||||||||| | || ||| |||| |||  |||||||| ||||||||||||||| |||| |||||||||||||||| ||||||    
T  38671729 cgattttgctggcagaatggatggtttttactaaag-caaatcgtggcgcgattttgtgcaggcgtgacgcaatttgtggataaggttgtcgtgccttgg 38671631  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtg 718  Q
    ||||||| | |||| ||||   |||||||   | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  38671630 gtcgtacgcttcaaccgtggtgcgattttcactagcgcggcgcgattttgtctgtcactttgtactatttaagtgtttcagctcatttttgaaggaagaa 38671531  T
Q  719 gagagagaacttcaagagaggaa 741  Q
    |||||||||||||||||||||||    
T  38671530 gagagagaacttcaagagaggaa 38671508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 523 - 738
Target Start/End: Complemental strand, 41649514 - 41649298
Alignment:
Q  523 ttttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtc 621  Q
    ||||| ||||||||||||||||||||||| ||| |||| |||  ||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  41649514 ttttgctggcagaatggatggtttctgcttaag-caaatcgtggcgcaattttgtgcaggcgtgacgcgatttgtggataaggttgtcgtaccttgggtc 41649416  T
Q  622 gtactcatcaatcgtgacacgattttgggtggcgcggcgcgatttt-gtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtgga 720  Q
    |||| | |||| |||| | |||||||   ||||||| | ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||    
T  41649415 gtacgcttcaaccgtggcgcgattttcactggcgcgacacgatttttgtctgtcactgtgtactatttaagtgttttagctcatttttgaaggaaggaga 41649316  T
Q  721 gagagaacttcaagagag 738  Q
    ||||||||||||||||||    
T  41649315 gagagaacttcaagagag 41649298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 520 - 741
Target Start/End: Original strand, 25615517 - 25615745
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| ||||||||||||||||||||||||||| |||| |||  |||||||| |||||| |||||  |||||| | |||||||||||||||||||||    
T  25615517 cgattttgctggcagaatggatggtttctgctgaag-caaatcgtggcgcgattttgtgcagccgtgatacgatttgtcgataaggttgtcgtaccttgg 25615615  T
Q  619 gtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtc-tgtcactgtgtactatttaagtgtttcagctcatttttgaagga-ag 716  Q
    ||||||| | |||| |||||| |||||||    || |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||    
T  25615616 gtcgtacgcttcaaccgtgacgcgattttcccaggtgcggcgcgatttttgcatgtcactgtgtactatttaagtgtttcagctcatttttgaaggagag 25615715  T
Q  717 tg-----gagagagaacttcaagagaggaa 741  Q
     |     |||||||||||||||||||||||    
T  25615716 agagagagagagagaacttcaagagaggaa 25615745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 520 - 668
Target Start/End: Original strand, 3258448 - 3258596
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcga-tttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||  ||||| ||||||||  ||||||||||||| |||||||||| || |||||||||    
T  3258448 cgattttgctggcagaatggatggtttctgctgaa-gcaaatcgtggcgcgattttgtgca-ccgtgacgcgatttgtggataaggtcgttgtaccttgg 3258545  T
Q  619 gtcgtactc-atcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    ||||||| | || || |||| | ||||||| | ||||||||||||||||||    
T  3258546 gtcgtacacaatgaaccgtggcgcgattttagctggcgcggcgcgattttg 3258596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 529 - 697
Target Start/End: Original strand, 9189580 - 9189749
Alignment:
Q  529 tggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactca 628  Q
    ||||| |||||||| ||| ||||||||||||| ||   |||||||||| | |||||| || ||||| |||||||||  || |||||||||||||||| |     
T  9189580 tggcataatggatgtttt-tgctgaaggcaaatcgcggcgcgatttgtactggcgtggcgtgatttttggataaggacgttgtaccttgggtcgtacgct 9189678  T
Q  629 tcaa-tcgtgacacgattttgggt-ggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    | || ||||| |||||||||  |  ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9189679 ttaaatcgtggcacgatttttagcaggcgcggcgcgatttcgtctgtcactgtgtactatataagtgtttc 9189749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 520 - 624
Target Start/End: Original strand, 31518465 - 31518570
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||  ||| |||||||||||||| ||||||||| ||| |||   ||||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  31518465 cgattttcctggtagaatggatggtttatgctgaaggtaaatcgtggtgcgattttgtgcaggcgtgatgcgatttctggataaggttgtcgtaccttgg 31518564  T
Q  619 gtcgta 624  Q
    ||||||    
T  31518565 gtcgta 31518570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 580 - 697
Target Start/End: Original strand, 23402638 - 23402755
Alignment:
Q  580 ggcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgattttgggtggcgcggcgcgattttgtctgtcactgt 679  Q
    |||||| ||| |||| ||||||||||||| ||||||||||||||||   |  |||||| | ||||| ||   ||||||||||||||| ||||||||||||    
T  23402638 ggcgtggcgcaatttgtggataaggttgttgtaccttgggtcgtacgtttatatcgtggcgcgattctgacaggcgcggcgcgatttcgtctgtcactgt 23402737  T
Q  680 gtactatttaagtgtttc 697  Q
    ||||||| ||||||||||    
T  23402738 gtactatataagtgtttc 23402755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 653 - 697
Target Start/End: Complemental strand, 2580786 - 2580742
Alignment:
Q  653 gcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  2580786 gcgcggcgcgatttcgtctgtcactgtgtactatttaagtgtttc 2580742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 533 - 697
Target Start/End: Original strand, 9184750 - 9184917
Alignment:
Q  533 agaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcaggcgtgacgcgatttatggataag--gttgtcgtaccttgggtcgtactc-at 629  Q
    |||||||||| ||| ||||||||||||| |||  |||||||||| | |||||| |||||||| ||||||||  |  || | |||||||||||||| |  |    
T  9184750 agaatggatgtttt-tgctgaaggcaaatcgtggcgcgatttgtactggcgtggcgcgatttgtggataaggagacgttgaaccttgggtcgtacgcttt 9184848  T
Q  630 caatcgtgacacga-ttttgggtggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
     ||||||| ||||| |||| |  |||||||||||||||  |||||||||||||| ||| ||| ||||||    
T  9184849 aaatcgtggcacgatttttagcaggcgcggcgcgatttcatctgtcactgtgtattatataactgtttc 9184917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 597 - 644
Target Start/End: Original strand, 19495718 - 19495766
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgat 644  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  19495718 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgat 19495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 640
Target Start/End: Complemental strand, 3050681 - 3050520
Alignment:
Q  480 ggaaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtg-c 578  Q
    |||| |||| ||||||| ||||||||||| ||||  | |||||||||  ||| |||  | ||||||| ||||| ||| ||| | | || ||||||||| |    
T  3050681 ggaagctcaaaatcgtgtcacgattttga-tggcatgacacgattttcttggaagagagcatggtttatgctggaggaaaatcatgacacgatttgtggc 3050583  T
Q  579 aggcgtgacgcgatttatggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgaca 640  Q
    |||| |||| | |||| |||||||  ||| |||||||||||||||||| ||||||||||||||    
T  3050582 aggcatgacactatttctggataatattggtcgtaccttgggtcgtacgcatcaatcgtgaca 3050520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 23554787 - 23554836
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  23554787 ggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgatt 23554836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 2647340 - 2647390
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  2647340 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 2647390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 655 - 697
Target Start/End: Complemental strand, 20284484 - 20284442
Alignment:
Q  655 gcggcgcgattttgtctgtcactgtgtactatttaagtgtttc 697  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||    
T  20284484 gcggcgcgatttcgtctgacactgtgtactatataagtgtttc 20284442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 44847769 - 44847819
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||| ||||||||    
T  44847769 ggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgattt 44847819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 24515181 - 24515132
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  24515181 ggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 24515132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 646
Target Start/End: Original strand, 33332094 - 33332143
Alignment:
Q  598 gataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    |||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  33332094 gataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 33332143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 649
Target Start/End: Complemental strand, 47676557 - 47676504
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttgg 649  Q
    ||||||||||| |||||||||||||||||| || ||| |||| |||||||||||    
T  47676557 ggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattttgg 47676504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 8e-54; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 482 - 737
Target Start/End: Complemental strand, 47038949 - 47038699
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaa-cgtcacgcgatttgtgcag 580  Q
    |||||||||||| |||||||||| ||||||||  | ||| |||||| |||||||| | |||||| ||||||||||||||| |||  ||||||||||||||    
T  47038949 aaactcataatcatgacacgattatgagtggcatgacacaattttgttggcagaacgtatggttcctgctgaaggcaaaatcgtggcgcgatttgtgcag 47038850  T
Q  581 gcgtgacgcgatttatggataaggttgtcgtaccttgggtcgtactcatcaatcgtgacacgatttt-gggtggcgcggcgcgattttgtctgtcactgt 679  Q
    |||||||  ||||| ||| ||||| |||||||||       ||||||| ||||||||||||| |||| |||||||| | |||  |||||||||||| |||    
T  47038849 gcgtgacaagatttctgggtaaggctgtcgtacc-------gtactcaccaatcgtgacacggtttttgggtggcgtgacgcagttttgtctgtcattgt 47038757  T
Q  680 gtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagaga 737  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  47038756 gtactatttaagtgtttcagctcatttttgaaggagatagagagagaacttcaagaga 47038699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 651 - 741
Target Start/End: Original strand, 5871612 - 5871702
Alignment:
Q  651 tggcgcggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5871612 tggcacggcgcgattttgtctgtcactgtgtactatttaagtgtttcagctcatttttgaaggaagaggagagagaacttcaagagaggaa 5871702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 482 - 625
Target Start/End: Original strand, 46702915 - 46703058
Alignment:
Q  482 aaactcataatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgatttgtgcagg 581  Q
    ||||||||||||||||||||||| ||||||| | | | |||||||| | |||||| |  |||||||||||||||||||| |||  ||||||| |||||||    
T  46702915 aaactcataatcgtgacacgattatgagtggtgtgacgcgattttgtttgcagaacgtgtggtttctgctgaaggcaaatcgtggcgcgattggtgcagg 46703014  T
Q  582 cgtgacgcgatttatggataaggttgtcgtaccttgggtcgtac 625  Q
    ||||||||||||| |||||||||| || ||||||||||||||||    
T  46703015 cgtgacgcgatttgtggataaggtcgttgtaccttgggtcgtac 46703058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 490 - 668
Target Start/End: Original strand, 378802 - 378980
Alignment:
Q  490 aatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacg 588  Q
    ||||||| | ||||||| || |||| | | |||||||  |||||||||||||||||||| |||||| ||||  || ||||||||| |||||| ||||||     
T  378802 aatcgtggcgcgattttcagaggcgtggcgcgattttattggcagaatggatggtttctactgaag-caaattgtgacgcgattttgtgcag-cgtgaca 378899  T
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtactca-tcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    |||||| ||||||||| ||| ||| |||||||||||| || | || |||| ||||||||||| ||||||||||||||||||    
T  378900 cgatttgtggataaggctgttgtatcttgggtcgtacacaatgaaccgtggcacgattttggctggcgcggcgcgattttg 378980  T

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Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 490 - 625
Target Start/End: Original strand, 5870017 - 5870152
Alignment:
Q  490 aatcgtgacacgattttgagtggcgcgtcacgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcgattt-gtgcaggcgtgacg 588  Q
    ||||||| | ||||||| || |||| | |||||||||| ||||||||||||||||||||||| ||| |||| |||   ||||||| |||||||||||||     
T  5870017 aatcgtggcgcgattttcagaggcgtggcacgattttgctggcagaatggatggtttctgcttaag-caaatcgtggtgcgattttgtgcaggcgtgaca 5870115  T
Q  589 cgatttatggataaggttgtcgtaccttgggtcgtac 625  Q
    |||||| |||||||| |||||| ||||||||||||||    
T  5870116 cgatttgtggataagtttgtcgaaccttgggtcgtac 5870152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 674 - 741
Target Start/End: Complemental strand, 13009784 - 13009717
Alignment:
Q  674 cactgtgtactatttaagtgtttcagctcatttttgaaggaagtggagagagaacttcaagagaggaa 741  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  13009784 cactatgtactatttaagtgtttcagctcatttttgaagggggtggagagagaacttcaagagaggaa 13009717  T

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Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 520 - 668
Target Start/End: Original strand, 41963869 - 41964017
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaaggcaaaacgtcacgcga-tttgtgcaggcgtgacgcgatttatggataaggttgtcgtaccttgg 618  Q
    |||||||| ||||||||||||||||||||| |||| ||||| |||  ||||| ||||||||  |||||| |||||| |||||||||| || |||||||||    
T  41963869 cgattttgctggcagaatggatggtttctgttgaa-gcaaatcgtggcgcgattttgtgca-ccgtgacacgatttgtggataaggtcgttgtaccttgg 41963966  T
Q  619 gtcgtactc-atcaatcgtgacacgattttgggtggcgcggcgcgattttg 668  Q
    ||||||| | || || |||| | |||||| || |||||||||| |||||||    
T  41963967 gtcgtacacaatgaaccgtggcgcgatttcggctggcgcggcgtgattttg 41964017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 589 - 648
Target Start/End: Original strand, 39773973 - 39774033
Alignment:
Q  589 cgatttatggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    |||||| |||||||||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  39773973 cgatttttggataaggttggtcgtaccttgggtcatacgcatcaatcgtgacacaattttg 39774033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 25861676 - 25861726
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  25861676 ggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgtcacgattt 25861726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 31438427 - 31438382
Alignment:
Q  205 tgtcaaagaaaccaacttcttgtcttaggattgattttagatattc 250  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||    
T  31438427 tgtcaaagaaaccaacttcttgtcttaagactgattttaggtattc 31438382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 648
Target Start/End: Original strand, 5396334 - 5396386
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattttg 648  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||||    
T  5396334 ggataaggttgatcgtaccttgggtcgtacgcaccaatcgtgccacgattttg 5396386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 644
Target Start/End: Complemental strand, 52095781 - 52095733
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgat 644  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  52095781 ggataaggttggtcgtaccttgggtcgtaagcatcaatcgtgacacgat 52095733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 555
Target Start/End: Original strand, 12072845 - 12072880
Alignment:
Q  520 cgattttggtggcagaatggatggtttctgctgaag 555  Q
    |||||||| |||||||||||||||||||||||||||    
T  12072845 cgattttgctggcagaatggatggtttctgctgaag 12072880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 692
Target Start/End: Complemental strand, 26700021 - 26699990
Alignment:
Q  661 cgattttgtctgtcactgtgtactatttaagt 692  Q
    ||||||||||||||||||||||||||||||||    
T  26700021 cgattttgtctgtcactgtgtactatttaagt 26699990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 5148131 - 5148081
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  5148131 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 5148081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 5268843 - 5268893
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  5268843 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 5268893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 8689140 - 8689190
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  8689140 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgattt 8689190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 16622937 - 16622987
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  16622937 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 16622987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 27417590 - 27417540
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| |||||| |||| ||||||||    
T  27417590 ggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgattt 27417540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 36314873 - 36314923
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  36314873 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 36314923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 36329082 - 36329132
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  36329082 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 36329132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 52083078 - 52083028
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| || ||||||||||||||  ||||||||||||||||||||    
T  52083078 ggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgattt 52083028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 52094085 - 52094035
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| || ||||||||||||||  ||||||||||||||||||||    
T  52094085 ggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgattt 52094035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 646
Target Start/End: Original strand, 16628517 - 16628566
Alignment:
Q  598 gataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    |||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  16628517 gataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 16628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 8061 - 8111
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  8061 ggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgattt 8111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 45652 - 45602
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  45652 ggataaggttggtcgtaccttgggtcgtacatatcaatcgtgacacgattt 45602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 132923 - 132973
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  132923 ggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgattt 132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 646
Target Start/End: Complemental strand, 2947 - 2897
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgattt 646  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  2947 ggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt 2897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 645
Target Start/End: Original strand, 114333 - 114382
Alignment:
Q  597 ggataaggttg-tcgtaccttgggtcgtactcatcaatcgtgacacgatt 645  Q
    ||||||||||| | |||||||||||||||| ||||| |||||||||||||    
T  114333 ggataaggttggtggtaccttgggtcgtacgcatcactcgtgacacgatt 114382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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