View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8289_high_15 (Length: 227)
Name: NF8289_high_15
Description: NF8289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8289_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 43309529 - 43309339
Alignment:
| Q |
27 |
caaggtacttcgaaccaactcattaatctcctccttcgtcaacggttcacccaacacttcttctctagacatcacatacctcgggctagtcccgggcaaa |
126 |
Q |
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| T |
43309529 |
caaggtacttcgaaccaactcattaatctcctccttcgtcaacggttcacccaacacttcttctctagacatcacatacctcgggctagtcccgggcaaa |
43309430 |
T |
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| Q |
127 |
aacggaccgggagactgaaccggtttaacacccttcttatgtggcgggggaagaacaaaagaatcaaactccttgagcttcttctcactcg |
217 |
Q |
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| T |
43309429 |
aacggaccgggagactgaaccggtttaacacccttcttatgtggcgggggaagaacaaaagaatcaaactccttgagcttcttcttactcg |
43309339 |
T |
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