View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8290_low_8 (Length: 250)

Name: NF8290_low_8
Description: NF8290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8290_low_8
NF8290_low_8
[»] chr3 (43 HSPs)
chr3 (1-237)||(53070798-53071034)
chr3 (10-128)||(18440232-18440350)
chr3 (10-128)||(19485306-19485424)
chr3 (48-179)||(45796785-45796916)
chr3 (29-179)||(49390007-49390153)
chr3 (32-130)||(20630472-20630570)
chr3 (10-179)||(1465747-1465913)
chr3 (48-170)||(23413630-23413752)
chr3 (48-130)||(14497131-14497213)
chr3 (10-130)||(17538010-17538124)
chr3 (10-85)||(43890081-43890157)
chr3 (10-85)||(5206700-5206775)
chr3 (10-85)||(40806876-40806951)
chr3 (10-85)||(41173416-41173491)
chr3 (1-85)||(8898844-8898930)
chr3 (1-85)||(24153448-24153534)
chr3 (8-85)||(17548612-17548689)
chr3 (10-85)||(11886855-11886930)
chr3 (8-130)||(13026671-13026787)
chr3 (10-85)||(14507784-14507859)
chr3 (10-85)||(15932551-15932626)
chr3 (10-85)||(17043976-17044051)
chr3 (10-85)||(17520067-17520142)
chr3 (10-85)||(17534864-17534939)
chr3 (10-85)||(30175611-30175686)
chr3 (10-85)||(40811691-40811766)
chr3 (1-85)||(16283137-16283223)
chr3 (1-85)||(17446980-17447066)
chr3 (32-84)||(13031823-13031875)
chr3 (10-85)||(18700771-18700847)
chr3 (10-85)||(5214798-5214873)
chr3 (32-130)||(22307618-22307710)
chr3 (10-85)||(21618249-21618326)
chr3 (10-85)||(36166355-36166432)
chr3 (1-47)||(14682151-14682198)
chr3 (8-83)||(17207049-17207124)
chr3 (10-85)||(22307699-22307774)
chr3 (1-85)||(41123642-41123726)
chr3 (99-179)||(12269285-12269362)
chr3 (160-237)||(22110453-22110530)
chr3 (10-85)||(29172910-29172987)
chr3 (10-85)||(17259259-17259332)
chr3 (10-85)||(35065691-35065767)
[»] scaffold0503 (1 HSPs)
scaffold0503 (10-237)||(11756-11983)
[»] chr4 (29 HSPs)
chr4 (10-229)||(6190255-6190474)
chr4 (69-237)||(21815730-21815898)
chr4 (10-151)||(21815865-21816006)
chr4 (48-179)||(3514829-3514960)
chr4 (48-179)||(15869083-15869214)
chr4 (48-179)||(32850999-32851130)
chr4 (10-139)||(19857200-19857329)
chr4 (10-179)||(13844221-13844387)
chr4 (10-179)||(15098967-15099133)
chr4 (10-179)||(361873-362039)
chr4 (1-85)||(44102044-44102130)
chr4 (1-85)||(18215602-18215687)
chr4 (1-85)||(52312260-52312346)
chr4 (1-85)||(14280102-14280188)
chr4 (1-85)||(54799038-54799124)
chr4 (10-85)||(35812534-35812610)
chr4 (10-85)||(10357578-10357653)
chr4 (1-85)||(20149618-20149704)
chr4 (10-85)||(15355609-15355686)
chr4 (10-85)||(19609161-19609235)
chr4 (1-47)||(44052599-44052646)
chr4 (8-85)||(12622383-12622458)
chr4 (32-85)||(10357494-10357547)
chr4 (99-128)||(46642598-46642627)
chr4 (1-55)||(14038473-14038529)
chr4 (10-85)||(15042225-15042301)
chr4 (10-85)||(15112123-15112199)
chr4 (8-83)||(46740080-46740153)
chr4 (10-62)||(53631671-53631723)
[»] chr6 (21 HSPs)
chr6 (1-237)||(18456489-18456736)
chr6 (1-237)||(18461649-18461896)
chr6 (75-237)||(18821945-18822108)
chr6 (10-151)||(18822081-18822222)
chr6 (10-179)||(25956958-25957124)
chr6 (9-139)||(27850794-27850924)
chr6 (14-117)||(18319517-18319620)
chr6 (1-85)||(1595299-1595385)
chr6 (10-85)||(23017252-23017327)
chr6 (10-85)||(17742968-17743044)
chr6 (8-85)||(16133733-16133810)
chr6 (8-85)||(19444343-19444420)
chr6 (8-85)||(19957984-19958059)
chr6 (32-85)||(18708402-18708455)
chr6 (1-84)||(20557220-20557305)
chr6 (10-67)||(31733628-31733685)
chr6 (10-85)||(17319167-17319242)
chr6 (32-67)||(27573394-27573429)
chr6 (1-45)||(25603696-25603741)
chr6 (10-85)||(25688341-25688418)
chr6 (10-85)||(25714216-25714293)
[»] scaffold0034 (1 HSPs)
scaffold0034 (10-237)||(51984-52211)
[»] chr2 (25 HSPs)
chr2 (1-229)||(32452038-32452266)
chr2 (10-85)||(19202301-19202376)
chr2 (10-85)||(24435933-24436008)
chr2 (1-85)||(23712339-23712425)
chr2 (13-85)||(22689563-22689635)
chr2 (13-85)||(22694159-22694231)
chr2 (10-85)||(5032461-5032536)
chr2 (10-85)||(9974805-9974880)
chr2 (1-85)||(6725745-6725831)
chr2 (10-130)||(356918-357032)
chr2 (10-85)||(24782002-24782077)
chr2 (10-85)||(24883342-24883417)
chr2 (32-85)||(6478347-6478400)
chr2 (32-85)||(24781960-24782013)
chr2 (10-85)||(24515052-24515128)
chr2 (36-83)||(6576142-6576189)
chr2 (10-85)||(21316810-21316885)
chr2 (10-85)||(21336800-21336875)
chr2 (10-85)||(22500763-22500837)
chr2 (10-85)||(22508697-22508771)
chr2 (10-85)||(26896190-26896265)
chr2 (8-62)||(1384824-1384878)
chr2 (160-237)||(22413239-22413315)
chr2 (32-85)||(23969645-23969698)
chr2 (94-130)||(7672482-7672518)
[»] scaffold0056 (1 HSPs)
scaffold0056 (10-237)||(79429-79656)
[»] chr8 (22 HSPs)
chr8 (47-237)||(19801526-19801716)
chr8 (10-179)||(39833604-39833769)
chr8 (10-179)||(38550328-38550494)
chr8 (10-179)||(20982962-20983128)
chr8 (10-179)||(27472625-27472791)
chr8 (10-85)||(19801719-19801794)
chr8 (32-128)||(13428427-13428523)
chr8 (10-130)||(1323458-1323580)
chr8 (10-85)||(24713101-24713176)
chr8 (1-85)||(15203557-15203643)
chr8 (1-85)||(45291022-45291108)
chr8 (10-85)||(19127871-19127946)
chr8 (1-81)||(19896015-19896097)
chr8 (10-85)||(26225575-26225652)
chr8 (32-85)||(39937107-39937160)
chr8 (10-85)||(18833208-18833283)
chr8 (1-85)||(41597938-41598024)
chr8 (10-62)||(20179614-20179666)
chr8 (10-73)||(18760310-18760373)
chr8 (99-130)||(24713207-24713238)
chr8 (33-130)||(19127936-19128027)
chr8 (8-67)||(22473429-22473486)
[»] chr7 (42 HSPs)
chr7 (75-237)||(12756816-12756978)
chr7 (10-179)||(6170439-6170605)
chr7 (10-179)||(9390033-9390199)
chr7 (32-179)||(37727874-37728018)
chr7 (13-179)||(17232250-17232413)
chr7 (13-179)||(45847960-45848123)
chr7 (12-112)||(14270435-14270535)
chr7 (48-111)||(1543467-1543530)
chr7 (10-90)||(8468111-8468191)
chr7 (10-85)||(8852262-8852337)
chr7 (10-84)||(11066306-11066380)
chr7 (1-85)||(44116301-44116387)
chr7 (1-84)||(20110304-20110389)
chr7 (10-85)||(18075582-18075656)
chr7 (1-85)||(17062160-17062246)
chr7 (1-85)||(29329204-29329290)
chr7 (1-85)||(48273140-48273226)
chr7 (32-85)||(38227286-38227339)
chr7 (10-130)||(46387097-46387211)
chr7 (33-85)||(32300904-32300956)
chr7 (10-85)||(13150675-13150750)
chr7 (10-85)||(20619123-20619198)
chr7 (10-85)||(48811717-48811792)
chr7 (27-85)||(20619182-20619240)
chr7 (32-85)||(12371204-12371257)
chr7 (32-85)||(12371246-12371299)
chr7 (10-85)||(14183721-14183797)
chr7 (1-67)||(15082225-15082293)
chr7 (10-85)||(18875946-18876022)
chr7 (10-62)||(44373853-44373905)
chr7 (10-62)||(44382718-44382770)
chr7 (10-85)||(61516-61591)
chr7 (10-85)||(12128237-12128311)
chr7 (10-83)||(13133564-13133635)
chr7 (10-83)||(8136156-8136228)
chr7 (32-85)||(13150633-13150686)
chr7 (6-85)||(18456652-18456733)
chr7 (10-67)||(32434746-32434803)
chr7 (32-85)||(36686297-36686350)
chr7 (119-151)||(1543476-1543508)
chr7 (1-48)||(16402739-16402787)
chr7 (10-85)||(20585301-20585377)
[»] scaffold0031 (2 HSPs)
scaffold0031 (69-237)||(20523-20691)
scaffold0031 (10-151)||(20658-20799)
[»] scaffold0716 (1 HSPs)
scaffold0716 (48-179)||(4516-4647)
[»] scaffold0075 (2 HSPs)
scaffold0075 (48-179)||(8669-8800)
scaffold0075 (1-85)||(52250-52336)
[»] chr5 (17 HSPs)
chr5 (10-179)||(5889496-5889662)
chr5 (10-184)||(21741873-21742044)
chr5 (10-93)||(29915436-29915519)
chr5 (1-85)||(32027143-32027229)
chr5 (1-85)||(14047871-14047957)
chr5 (1-85)||(20918273-20918359)
chr5 (1-85)||(11581527-11581613)
chr5 (1-85)||(24066940-24067026)
chr5 (1-85)||(18319277-18319363)
chr5 (1-85)||(22411937-22412022)
chr5 (1-85)||(29329684-29329770)
chr5 (10-67)||(13536469-13536526)
chr5 (10-67)||(19920595-19920652)
chr5 (32-85)||(21309063-21309116)
chr5 (10-85)||(17874945-17875019)
chr5 (1-46)||(23390800-23390846)
chr5 (10-85)||(2154940-2155017)
[»] chr1 (28 HSPs)
chr1 (10-179)||(28194786-28194952)
chr1 (10-179)||(43542736-43542902)
chr1 (10-178)||(20636523-20636688)
chr1 (10-179)||(35982016-35982182)
chr1 (32-179)||(41305924-41306068)
chr1 (10-128)||(46382940-46383058)
chr1 (33-128)||(43697015-43697110)
chr1 (1-85)||(431509-431594)
chr1 (10-85)||(41227790-41227865)
chr1 (1-85)||(40388943-40389029)
chr1 (10-85)||(35088355-35088430)
chr1 (10-84)||(20587610-20587684)
chr1 (10-84)||(20592148-20592222)
chr1 (1-85)||(29297887-29297973)
chr1 (10-67)||(48300743-48300800)
chr1 (10-85)||(20634671-20634746)
chr1 (160-237)||(16368387-16368463)
chr1 (160-237)||(50686555-50686631)
chr1 (10-85)||(20316187-20316263)
chr1 (10-85)||(23967528-23967604)
chr1 (10-85)||(13528855-13528930)
chr1 (10-85)||(14238599-14238673)
chr1 (99-130)||(35088503-35088534)
chr1 (8-85)||(44891534-44891609)
chr1 (10-85)||(16059425-16059501)
chr1 (8-67)||(24720915-24720972)
chr1 (3-85)||(27161789-27161873)
chr1 (205-237)||(41050137-41050169)
[»] scaffold0192 (2 HSPs)
scaffold0192 (48-150)||(9701-9803)
scaffold0192 (118-151)||(9722-9755)
[»] scaffold0116 (1 HSPs)
scaffold0116 (10-179)||(44121-44287)
[»] scaffold0810 (1 HSPs)
scaffold0810 (10-139)||(2663-2792)
[»] scaffold0235 (2 HSPs)
scaffold0235 (48-179)||(13180-13311)
scaffold0235 (48-179)||(24882-25012)
[»] scaffold0098 (1 HSPs)
scaffold0098 (48-179)||(34767-34898)
[»] scaffold1792 (1 HSPs)
scaffold1792 (10-179)||(14-179)
[»] scaffold0230 (2 HSPs)
scaffold0230 (10-179)||(23721-23886)
scaffold0230 (14-179)||(20790-20952)
[»] scaffold0035 (1 HSPs)
scaffold0035 (10-179)||(106183-106349)
[»] scaffold0029 (1 HSPs)
scaffold0029 (48-179)||(74469-74600)
[»] scaffold0045 (1 HSPs)
scaffold0045 (48-139)||(47049-47140)
[»] scaffold0036 (1 HSPs)
scaffold0036 (10-85)||(78449-78524)
[»] scaffold0375 (2 HSPs)
scaffold0375 (10-85)||(9441-9516)
scaffold0375 (32-85)||(9399-9452)
[»] scaffold0064 (1 HSPs)
scaffold0064 (10-85)||(57680-57755)
[»] scaffold0047 (1 HSPs)
scaffold0047 (10-85)||(77966-78041)
[»] scaffold0737 (3 HSPs)
scaffold0737 (10-84)||(6786-6860)
scaffold0737 (32-85)||(6701-6754)
scaffold0737 (205-237)||(1899-1931)
[»] scaffold0507 (1 HSPs)
scaffold0507 (10-81)||(3025-3096)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-82)||(16527-16610)
[»] scaffold0111 (3 HSPs)
scaffold0111 (10-85)||(7194-7269)
scaffold0111 (10-85)||(14313-14388)
scaffold0111 (32-85)||(14400-14453)
[»] scaffold0697 (1 HSPs)
scaffold0697 (1-85)||(6352-6438)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-85)||(1524-1610)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-85)||(44204-44290)
[»] scaffold0117 (1 HSPs)
scaffold0117 (8-85)||(41286-41363)
[»] scaffold0106 (1 HSPs)
scaffold0106 (6-85)||(15478-15559)
[»] scaffold0853 (1 HSPs)
scaffold0853 (10-85)||(2936-3012)
[»] scaffold0394 (1 HSPs)
scaffold0394 (1-67)||(11813-11881)
[»] scaffold1633 (1 HSPs)
scaffold1633 (10-85)||(134-209)
[»] scaffold0450 (1 HSPs)
scaffold0450 (10-85)||(13563-13638)
[»] scaffold0371 (1 HSPs)
scaffold0371 (10-85)||(2763-2838)
[»] scaffold0061 (1 HSPs)
scaffold0061 (10-85)||(19516-19591)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-85)||(30087-30173)
[»] scaffold0509 (1 HSPs)
scaffold0509 (10-67)||(9915-9972)
[»] scaffold0188 (1 HSPs)
scaffold0188 (32-85)||(698-751)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-48)||(25710-25758)
[»] scaffold0010 (1 HSPs)
scaffold0010 (173-237)||(60817-60880)
[»] scaffold1351 (1 HSPs)
scaffold1351 (99-130)||(1402-1433)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-47)||(8250-8297)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-47)||(10086-10133)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-47)||(10069-10116)
[»] scaffold0001 (1 HSPs)
scaffold0001 (99-130)||(76737-76768)
[»] scaffold0601 (1 HSPs)
scaffold0601 (10-67)||(7957-8015)
[»] scaffold0574 (1 HSPs)
scaffold0574 (1-47)||(8119-8164)
[»] scaffold0486 (1 HSPs)
scaffold0486 (10-67)||(8282-8340)
[»] scaffold0134 (1 HSPs)
scaffold0134 (99-133)||(10258-10292)
[»] scaffold0121 (1 HSPs)
scaffold0121 (8-85)||(19094-19169)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-46)||(1622-1668)
[»] scaffold1403 (1 HSPs)
scaffold1403 (160-237)||(494-570)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-47)||(1310-1358)
[»] scaffold0080 (1 HSPs)
scaffold0080 (32-85)||(59650-59703)
[»] scaffold0011 (1 HSPs)
scaffold0011 (10-83)||(39806-39879)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-48)||(1719-1767)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-55)||(5126-5182)
[»] scaffold0228 (1 HSPs)
scaffold0228 (1-55)||(21859-21915)
[»] scaffold0019 (1 HSPs)
scaffold0019 (10-62)||(25902-25954)


Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 53071034 - 53070798
Alignment:
Q  1 acctcttatatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtatta 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  53071034 acctcttatatgcatgtggtaccatttaggacatcaagccctcatcgtattgagcgtaaataggctctcacagcatcaagccctctcccatcgcgtatta 53070935  T
Q  101 tgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttctta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53070934 tgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttctta 53070835  T
Q  201 atgcaaatccaataaattggaacatcatccttcatct 237  Q
    || |||||||||||||||| |||||||||||||||||    
T  53070834 atacaaatccaataaattgaaacatcatccttcatct 53070798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 18440350 - 18440232
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| || |  |||||||||||||    
T  18440350 atgcatgtggtaccaacaaggacatcaagcccccaacgtattgagcgtaaataggctcacagagcatcaagccctctcccttcacaaattatgtataaat 18440251  T
Q  110 atacattacagagcatcaa 128  Q
    |||||||||||||||||||    
T  18440250 atacattacagagcatcaa 18440232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 19485424 - 19485306
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| || |  |||||||||||||    
T  19485424 atgcatgtggtaccaacaaggacatcaagcccccaacgtattgagcgtaaataggctcacagagcatcaagccctctcccttcacaaattatgtataaat 19485325  T
Q  110 atacattacagagcatcaa 128  Q
    |||||||||||||||||||    
T  19485324 atacattacagagcatcaa 19485306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 45796785 - 45796916
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |  ||| |||||||||||||||||||||||||||||| ||| ||||||||  ||    
T  45796785 tattgagcgtaaataggctcccagagcatcaagccctctcccatctcagattgtgtataaatatacattacagagcatcaagccctcccccatctcagat 45796884  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||  ||||||||||||| ||| || |||||    
T  45796885 tatgaatatgcaatggacttaacatcctaaca 45796916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 49390153 - 49390007
Alignment:
Q  29 ggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaa 128  Q
    |||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| || || | |||||||||||||||||||||||||||||||||    
T  49390153 ggacatcaagccccaa-cgtattgagcgtaaataggctctcagagcatcaagccctctaccttcacatattatgtataaatatacattacagagcatcaa 49390055  T
Q  129 gctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||| || ||||   ||||  ||| |||||||||| ||||||| ||||||||    
T  49390054 gctgtcaccca--acgta-aatgagtatgcaatgaactcaacatcttaaca 49390007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 20630570 - 20630472
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagc 130  Q
    ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  20630570 catcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaatatacattacagagcatcaagc 20630472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 1465913 - 1465747
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | |||||||| ||||||||||| ||||| ||||| | ||||||| || | |||||||| |||||    
T  1465913 atgcatgtggtaccaaccagggcatcaagcccccaacttattgagcttaaataggctcacagagcatcaatctctctcccttcacatattatgtttaaat 1465814  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  1465813 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 1465747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 23413752 - 23413630
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    ||||||||||||||||||||  |||| |||||||||||||||||| |  ||| ||||||||||||||||| |||||||||||| ||| ||||||||  ||    
T  23413752 tattgagcgtaaataggctcctagagcatcaagccctctcccatctcagattgtgtataaatatacattatagagcatcaagccctcccccatctcagat 23413653  T
Q  148 tatgcgtatgcaatggactcaac 170  Q
    ||||  |||||||||||||||||    
T  23413652 tatgaatatgcaatggactcaac 23413630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 14497131 - 14497213
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagc 130  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||| |  ||| |||||||||||||||||||||| |||||||    
T  14497131 tattgagcgtaaataggctcccagagcatcaagccctctcctatctcagattgtgtataaatatacattacagagtatcaagc 14497213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 17538010 - 17538124
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||        | || |||||||||||    
T  17538010 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc------aacataatatgtataaat 17538103  T
Q  110 atacattacagagcatcaagc 130  Q
    ||||||||||| |||||||||    
T  17538104 atacattacagggcatcaagc 17538124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 43890157 - 43890081
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  43890157 atgcatgtggtaccaattcagggcatcaagcccccaacgtattgagcgtaaataggctcccagggcatcaagccctc 43890081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 5206775 - 5206700
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||||||||||| ||| | ||||| |||||    
T  5206775 atgcatgtggtaccaaccagggcatcaagcccccatcgtattgagcgtaaataggctcacagggcatcaaaccctc 5206700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 40806876 - 40806951
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  40806876 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 40806951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 41173491 - 41173416
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  41173491 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 41173416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8898844 - 8898930
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | |||||||||||    
T  8898844 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 8898930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24153534 - 24153448
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  24153534 acctcttatatgcatgtggtaccaatgcagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 24153448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 17548689 - 17548612
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||| ||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  17548689 atatgcatgtggcaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 17548612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 11886930 - 11886855
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| || || |||||||||||    
T  11886930 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacatagcatcaagccctc 11886855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 13026787 - 13026671
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataa 107  Q
    |||||||||||| ||||   ||| ||||||||||||| |||||||||||||||||||||| ||  | |||||||||||        | || |||||||||    
T  13026787 atatgcatgtggcaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacaaggcatcaagccctc------aacataatatgtataa 13026694  T
Q  108 atatacattacagagcatcaagc 130  Q
    ||||||||||||| |||||||||    
T  13026693 atatacattacagggcatcaagc 13026671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 14507784 - 14507859
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||    || ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  14507784 atgcatgtggtaccaaccggggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 14507859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 15932626 - 15932551
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||  ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  15932626 atgcatgtggtaccaaccagagcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 15932551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 17043976 - 17044051
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  17043976 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggaatcaaaccctc 17044051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 17520142 - 17520067
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  17520142 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 17520067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 17534939 - 17534864
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  17534939 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 17534864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 30175686 - 30175611
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  30175686 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 30175611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 40811691 - 40811766
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  40811691 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 40811766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 16283223 - 16283137
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | | |||||||||    
T  16283223 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcaacaagccctc 16283137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17447066 - 17446980
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | ||||| |||||    
T  17447066 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaatccctc 17446980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 13031875 - 13031823
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccct 84  Q
    ||||||||||||| |||||||||||||||||||||| ||| | ||||||||||    
T  13031875 catcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccct 13031823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 18700847 - 18700771
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||| ||||    
T  18700847 atgcatgtggtaccaatccagggcatcaagcccccaacgtattgagcgtaaataggctcccagggcatcaagacctc 18700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 5214798 - 5214873
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| | |||||| ||||||||||||| ||| | |||||||||||    
T  5214798 atgcatgtggtaccaaccagggcatcaagcccccaacatattgaacgtaaataggctcacagggcatcaagccctc 5214873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 22307710 - 22307618
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagc 130  Q
    |||||||||| || |||||||||||||||||||||| ||| | |||||||||||        | || |||||||||||||||||||||| |||||||||    
T  22307710 catcaagccctcaacgtattgagcgtaaataggctcacagggcatcaagccctc------aacataatatgtataaatatacattacagggcatcaagc 22307618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 21618249 - 21618326
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  21618249 atgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 21618326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 36166355 - 36166432
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  36166355 atgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 36166432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14682151 - 14682198
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg 47  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||    
T  14682151 acctcttatatgcatgtggtaccaatatagggcatcaagcccccatcg 14682198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 17207049 - 17207124
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccc 83  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| |||| ||||||  ||| ||| | |||||||||    
T  17207049 atatgcatgtggtaccaatcagggcatcaagcccccaacgtatagagcataaatatactcacagggcatcaagccc 17207124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 22307774 - 22307699
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||| ||   ||| ||||||||||||| ||||||||||||||||| | || ||| | |||||||||||    
T  22307774 atgcatgtggtatcaaccagggcatcaagcccccaacgtattgagcgtaaatatgttcacagggcatcaagccctc 22307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41123642 - 41123726
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| |||||||  |||| |||| |||||||||||||||||| ||| | |||||||||||    
T  41123642 acctcttatatgcatgtggtaccaatccagggcatcaag--cccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 41123726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 12269285 - 12269362
Alignment:
Q  99 tatgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||| |||||||||||||||||||| ||| |||| ||   || |   |||||||||||||||||| ||||||||    
T  12269285 tatgtataaatgtacattacagagcatcaagccctcacccaacttaaataa---gtatgcaatggactcaacatcttaaca 12269362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 22110530 - 22110453
Alignment:
Q  160 atggactcaacttcttaacattttagaa-catcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||  |||||||| |||||| || |||| ||||| |  ||||||||||| |||||||||||||||||||||    
T  22110530 atggactcaacaacttaacatcttagaaacaacgacctctta-tataaatccaataatttggaacatcatccttcatct 22110453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 29172987 - 29172910
Alignment:
Q  10 atgcatgtggtaccatt-taggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | |||| ||||||||||||| ||| || || ||||||||||||| ||| | |||||||||||    
T  29172987 atgcatgtggtaccaatctagggcatcaagcccccaacgtgtttgaacgtaaataggctcccagggcatcaagccctc 29172910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 17259332 - 17259259
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | ||| ||||||||||||| | ||| |||||  ||||||||| ||| | |||||||||||    
T  17259332 atgcatgtggtaccaatcagggcatcaagcccccaacttatagagcg--aataggctcacagggcatcaagccctc 17259259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 35065767 - 35065691
Alignment:
Q  10 atgcatgtggtaccatt-taggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | |||| ||||||||||||| | |||||||| ||||||  ||| ||| | |||||||||||    
T  35065767 atgcatgtggtaccaatctagggcatcaagcccccaacatattgagcataaatacactcccagggcatcaagccctc 35065691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 11756 - 11983
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  11756 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagcatcaagccctctaccatcgcgtattatgtataaat 11855  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttcttaatgcaaatc 209  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11856 atacattacagagaatcaagctctctcccatctcgtattatgcatatgcaatggactcaacttcttaacattttagaacatcgacttcttaatacaaatc 11955  T
Q  210 caataaattggaacatcatccttcatct 237  Q
    ||||||||||||||||||||||||||||    
T  11956 caataaattggaacatcatccttcatct 11983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 6190255 - 6190474
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  6190255 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagcatcaagccctctaccatcgtgtattatgtataaat 6190354  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttcttaatgcaaatc 209  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  6190355 atacattacagagcatcaagctctctaccatctcgtattatgcgtatgcaatggactcaactccttaacattttagaacatcgacttcttaatacaaatc 6190454  T
Q  210 caataaattggaacatcatc 229  Q
    ||||||||||||||||||||    
T  6190455 caataaattggaacatcatc 6190474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 21815898 - 21815730
Alignment:
Q  69 cagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactca 168  Q
    ||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21815898 cagagcatcaagctctctcccatctcgtgttatgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgtaatggactca 21815799  T
Q  169 acttcttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21815798 acttcttaacattttagaacatcgacttcttaatacaaatccaataaattggaacatcatccttcatct 21815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 21816006 - 21815865
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| || ||||||||||||    
T  21816006 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcatagcatcaagccctctcccatcgtgtgttatgtataaat 21815907  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatg 151  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  21815906 atacattacagagcatcaagctctctcccatctcgtgttatg 21815865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 3514829 - 3514960
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  3514829 tattgagcgtaaataggctctcagtgcatcaagccctctcccatctcgtattatgtataaatatacattacagatcatcaagccctctcccatctcgtat 3514928  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||| |||||||||||||||||| ||||||||    
T  3514929 tatgagtatgcaatggactcaacatcttaaca 3514960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 15869214 - 15869083
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||    
T  15869214 tattgagcgtaaataggctcttatagcatcaagccctctcccatctcgtattatgtataaatatacattacagagcatcaagccctcccccatcacgtat 15869115  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||| |||||||||||||||||| || |||||    
T  15869114 tatgagtatgcaatggactcaacatcctaaca 15869083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 32850999 - 32851130
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |  ||| |||||||||||||||||||||||||||||| ||| |||||||| |||    
T  32850999 tattgagcgtaaataggctcccagagcatcaagccctctcccatctcagattgtgtataaatatacattacagagcatcaagccctcccccatctcatat 32851098  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||  ||||||||||||||||| || |||||    
T  32851099 tatgaatatgcaatggactcaacatcctaaca 32851130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 19857200 - 19857329
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  19857200 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 19857299  T
Q  110 atacattacagagcatcaagctctctccca 139  Q
    ||||||||||||||||||||| ||| ||||    
T  19857300 atacattacagagcatcaagccctcaccca 19857329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 13844221 - 13844387
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    ||||||||||||| |   ||| ||||||||||||| |||||||||| ||||||||||| ||||| |||||| |||||||| || | ||||||||||||||    
T  13844221 atgcatgtggtacaaaccagggcatcaagcccccaacgtattgagcttaaataggctcacagagcatcaagtcctctcccttcacatattatgtataaat 13844320  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  13844321 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 13844387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 15098967 - 15099133
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||| ||| || | ||||||||||||||    
T  15098967 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagagcatcaaaccctcccccttcacatattatgtataaat 15099066  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| | ||||||    
T  15099067 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacattttaaca 15099133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 361873 - 362039
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | ||||||| |||||||||||| ||||| ||||||| ||||||| || | ||||||||||||||    
T  361873 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagtgtaaataggctcacagagcatcaagctctctcccttcacatattatgtataaat 361972  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||  ||||||||    
T  361973 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaatatcttaaca 362039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44102044 - 44102130
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||||||| | |||||||||||    
T  44102044 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctctcagggcatcaagccctc 44102130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18215687 - 18215602
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||||||||| ||| | |||||||||||    
T  18215687 acctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgtatttgagcgtaaataggctc-cagggcatcaagccctc 18215602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 52312260 - 52312346
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||| ||||| |||||| |||||||||||||||| ||||| |||||||||||    
T  52312260 acctcttatatgcatgtggtaccaatccagggcatcaagtccccaacgtatttgagcgtaaataggctcccagagcatcaagccctc 52312346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14280102 - 14280188
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| | |||||||||||||||| ||| | |||||||||||    
T  14280102 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtagtagagcgtaaataggctcccagggcatcaagccctc 14280188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 54799124 - 54799038
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | ||||| |||||    
T  54799124 acctcttatatgcatgtggtaccaatgcagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaaaccctc 54799038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 35812610 - 35812534
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| |||||||||||||||||||||| ||  | |||||||||||    
T  35812610 atgcatgtggtaccaatccagggcatcaagcccccaacgtattgagcgtaaataggctcacatggcatcaagccctc 35812534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 10357653 - 10357578
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||| ||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  10357653 atgcatatggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 10357578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20149618 - 20149704
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| | |||||||||||||||| ||| | |||||| ||||    
T  20149618 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtagtagagcgtaaataggctcccagggcatcaagtcctc 20149704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 15355686 - 15355609
Alignment:
Q  10 atgcatgtggtaccatt-taggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | |||| ||||||||||||| | |||| |||||||||||||||| ||| | |||||||||||    
T  15355686 atgcatgtggtaccaatctagggcatcaagcccccaacatatttgagcgtaaataggctcccagggcatcaagccctc 15355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 19609161 - 19609235
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||| ||| |||||||||||||||||  ||| ||||| |||||||||||    
T  19609161 atgcatgtggtaccaaccagg-catcaagcctccaacgtattgagcgtaaataaactcacagagcatcaagccctc 19609235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44052599 - 44052646
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg 47  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  44052599 acctcttatatgcatgtggtaccaatacaggacatcaagcccccatcg 44052646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 12622383 - 12622458
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| |||||| | ||| ||||||||||||| ||||| ||||  |||||||||| ||| | |||||||||||    
T  12622383 atatgcatgtcgtaccaatcagggcatcaagcccccaacgtatagagc--aaataggctcacagggcatcaagccctc 12622458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 10357547 - 10357494
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||| | ||||| |||||    
T  10357547 catcaagccctcaacgtattgagcgtaaataggctcacagggcatcaaaccctc 10357494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 46642598 - 46642627
Alignment:
Q  99 tatgtataaatatacattacagagcatcaa 128  Q
    ||||||||||||||||||||||||||||||    
T  46642598 tatgtataaatatacattacagagcatcaa 46642627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14038473 - 14038529
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg-tattgagc 55  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||| ||||||||    
T  14038473 acctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgctattgagc 14038529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 15042301 - 15042225
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||| ||||||||| | |||||||||||||||||||| ||| | ||||| |||||    
T  15042301 atgcatgtggtaccaatccagggcatgaagcccccaacatattgagcgtaaataggctcacagggcatcaatccctc 15042225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 15112123 - 15112199
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||| ||||||||| | |||||||||||||||||||| ||| | ||||| |||||    
T  15112123 atgcatgtggtaccaatccagggcataaagcccccaacatattgagcgtaaataggctcacagggcatcaatccctc 15112199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 46740080 - 46740153
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccc 83  Q
    ||||||||||||||||| | ||| ||||||||||||| |||||  || | |||||||||| ||| | |||||||||    
T  46740080 atatgcatgtggtaccaatcagggcatcaagcccccaacgtat--agagaaaataggctcacagggcatcaagccc 46740153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 53631723 - 53631671
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaata 62  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||| ||||||    
T  53631723 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcataaata 53631671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18456489 - 18456736
Alignment:
Q  1 acctcttatatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtatta 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18456489 acctcttatatgcatgtggtactatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagaggatcaagccctctcccatcgcgtatta 18456588  T
Q  101 tgtataaatatacattacagagcatcaagctctc-----------tcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaaca 189  Q
    ||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18456589 tgtataaatatacattacagagcatcaagctctctcccatctcgttcccatctcgtattatgcgtatgcaatggactcaacttcctaacattttagaaca 18456688  T
Q  190 tcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18456689 tcgacttcttaatacaaatccaataaattggaacatcatccttcatct 18456736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18461649 - 18461896
Alignment:
Q  1 acctcttatatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtatta 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18461649 acctcttatatgcatgtggtactatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagaggatcaagccctctcccatcgcgtatta 18461748  T
Q  101 tgtataaatatacattacagagcatcaagctctc-----------tcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaaca 189  Q
    ||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18461749 tgtataaatatacattacagagcatcaagctctctcccatctcgttcccatctcgtattatgcgtatgcaatggactcaacttcctaacattttagaaca 18461848  T
Q  190 tcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18461849 tcgacttcttaatacaaatccaataaattggaacatcatccttcatct 18461896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 18822108 - 18821945
Alignment:
Q  75 atcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttct 174  Q
    ||||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18822108 atcaagctctctaccatcacatattatgtataaatatacattacagagcatcaagctctctaccatctcgtattatgcgtatgcaatggactcaacttct 18822009  T
Q  175 taacattttagaacatcgac-ttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
     ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  18822008 caacattttagaacatcgactttcttaatacaaatccaataaattggaacatcatccttcatct 18821945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 18822222 - 18822081
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  18822222 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagcatcaagccctctaccatcgcgtattatgtataaat 18822123  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatg 151  Q
    |||||||||| ||||||||||||||| ||||| | |||||||    
T  18822122 atacattacaaagcatcaagctctctaccatcacatattatg 18822081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 25957124 - 25956958
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  25957124 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 25957025  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  25957024 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 25956958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 27850794 - 27850924
Alignment:
Q  9 tatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaa 108  Q
    ||||||||||||||||   ||| |||||||  |||| | ||||||||||||||||||||  |||| ||||||||||||||| || |||| |||||| |||    
T  27850794 tatgcatgtggtaccaaccagggcatcaagtacccaacatattgagcgtaaataggctcatagagcatcaagccctctcccctcacgtactatgtacaaa 27850893  T
Q  109 tatacattacagagcatcaagctctctccca 139  Q
    ||||||||| |||||||||||| ||| ||||    
T  27850894 tatacattatagagcatcaagccctcaccca 27850924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 18319517 - 18319620
Alignment:
Q  14 atgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatac 113  Q
    |||||||||||   ||| |||||||||| || | ||||||||||||||||||||  |||| ||||||||||||||| | |||||||||||||||||||||    
T  18319517 atgtggtaccaaccagggcatcaagccctcaacatattgagcgtaaataggctccaagagcatcaagccctctccctttgcgtattatgtataaatatac 18319616  T
Q  114 atta 117  Q
    ||||    
T  18319617 atta 18319620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1595299 - 1595385
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||||||| | |||||||||||    
T  1595299 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctctcagggcatcaagccctc 1595385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 23017327 - 23017252
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  23017327 atgcatgtggtaccaacaaggacatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 23017252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 17742968 - 17743044
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| ||||||||||||||||||||||  |||| |||||||||||    
T  17742968 atgcatgtggtaccaatccagggcatcaagcccccaacgtattgagcgtaaataggctcctagagcatcaagccctc 17743044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 16133810 - 16133733
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||| ||||   ||| ||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||    
T  16133810 atatgcatgtggcaccagccagggcatcaagcccccaacgtattgagagtaaataggctcacagggcatcaagccctc 16133733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 19444420 - 19444343
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||| ||||   ||| ||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||    
T  19444420 atatgcatgtggcaccagccagggcatcaagcccccaacgtattgagtgtaaataggctcacagggcatcaagccctc 19444343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 19958059 - 19957984
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| ||||  |||||||||| ||| | |||||||||||    
T  19958059 atatgcatgtggtaccaatcagggcatcaagcccccaacgtatagagc--aaataggctcacagggcatcaagccctc 19957984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 18708402 - 18708455
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||||| |||||| ||||    
T  18708402 catcaagccctcaacgtattgagcgtaaataggctcacagagcatcaagacctc 18708455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20557305 - 20557220
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccct 84  Q
    ||||||||||||||| |||||||| |  ||| ||||||||||||| | |||| |||||||||||||||| ||| | ||||||||||    
T  20557305 acctcttatatgcatatggtaccaatccagggcatcaagcccccaacatatttgagcgtaaataggctcccagggcatcaagccct 20557220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 31733628 - 31733685
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    |||||||||||||||   ||  ||||||||||||| ||||||||||||||||||||||    
T  31733628 atgcatgtggtaccaaccagagcatcaagcccccaacgtattgagcgtaaataggctc 31733685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 17319242 - 17319167
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||| | |||| |||||||||||||| ||||||| ||| ||||||| |||||    
T  17319242 atgcatgtggtaccaaccagggcatcaaactcccaacgtattgagcgtaactaggctcacagggtatcaaaccctc 17319167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 27573429 - 27573394
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctc 67  Q
    ||||||||||||| ||||||||||||||||||||||    
T  27573429 catcaagcccccaacgtattgagcgtaaataggctc 27573394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25603741 - 25603696
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccat 45  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||    
T  25603741 acctcttatatgcatgtggtaccaatatagggcatcaagcccccat 25603696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 25688341 - 25688418
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||| ||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  25688341 atgcatgtggtaccaatccagggcattaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 25688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 25714216 - 25714293
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| | |||| |||||||||||||||| ||||| ||||| |||||    
T  25714216 atgcatgtggtaccaatccagggcatcaagcccccaacatatttgagcgtaaataggctcccagagcatcaaaccctc 25714293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 52211 - 51984
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  52211 atgcatgtggtaccatttaggacatcaatcccccatcgtattgagcgtaaataggctctcagagcatcaagccctctaccatcgcgtgttatgtataaat 52112  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttcttaatgcaaatc 209  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  52111 atacattacagagcatcaagctatctaccatctcgtattatgcgtatgcaatggactcaactccttaacattttagaacatcgacttcttaatacaaatc 52012  T
Q  210 caataaattggaacatcatccttcatct 237  Q
    ||||||||||||||||||||||| ||||    
T  52011 caataaattggaacatcatcctttatct 51984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32452266 - 32452038
Alignment:
Q  1 acctcttatatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtatta 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||  | |||    
T  32452266 acctcttgtatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagcatcaatccctctaccatcgtttttta 32452167  T
Q  101 tgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttctta 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32452166 tgtataaatatacattacagagcatcaagctctctaccatctcgtattatgcgtatgcaatggactcaactccttaacattttagaacatcgacttctta 32452067  T
Q  201 atgcaaatccaataaattggaacatcatc 229  Q
    || ||||||||||||||||||||||||||    
T  32452066 atacaaatccaataaattggaacatcatc 32452038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 19202376 - 19202301
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  19202376 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 19202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 24435933 - 24436008
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  24435933 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 24436008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23712425 - 23712339
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  23712425 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 23712339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 22689563 - 22689635
Alignment:
Q  13 catgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  22689563 catgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggaatcaagccctc 22689635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 22694159 - 22694231
Alignment:
Q  13 catgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  22694159 catgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggaatcaagccctc 22694231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 5032536 - 5032461
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   |||  |||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  5032536 atgcatgtggtaccaaccagggtatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 5032461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 9974805 - 9974880
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||  ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  9974805 atgcatgtggtaccaaccagagcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 9974880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6725745 - 6725831
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| |||   |||||||||||    
T  6725745 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccaggacatcaagccctc 6725831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 356918 - 357032
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| |||||||||| || |||||||||| ||||||||||| ||| | |||||||||||        | || |||||||||||    
T  356918 atgcatgtggtaccaaccagggcatcaagccctcaacgtattgagcataaataggctcacagggcatcaagccctc------aacataatatgtataaat 357011  T
Q  110 atacattacagagcatcaagc 130  Q
    ||||||||||| |||||||||    
T  357012 atacattacagggcatcaagc 357032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 24782077 - 24782002
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||| ||||||||||||| ||  | |||||||||||    
T  24782077 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgaacgtaaataggctcacatggcatcaagccctc 24782002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 24883342 - 24883417
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||| || ||||||||| |||||||||||| ||| | |||||||||||    
T  24883342 atgcatgtggtaccaaccagggcatcaagccctcaacgtattgagtgtaaataggctcacagtgcatcaagccctc 24883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 6478400 - 6478347
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  6478400 catcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 6478347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 24782013 - 24781960
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||| | |||||||||||    
T  24782013 catcaagccctcaacgtattgagcgtaaataggctcacagggcatcaagccctc 24781960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 24515052 - 24515128
Alignment:
Q  10 atgcatgtggtaccatt-taggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | |||||||||||||||||| | |||||||| ||||||  ||| ||| | |||||||||||    
T  24515052 atgcatgtggtaccaatctaggacatcaagcccccaacatattgagcataaatacactcacagggcatcaagccctc 24515128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 6576142 - 6576189
Alignment:
Q  36 aagcccccatcgtattgagcgtaaataggctctcagagtatcaagccc 83  Q
    ||||||||| |||||||||||||||||||||| ||| | |||||||||    
T  6576142 aagcccccaacgtattgagcgtaaataggctcccagggcatcaagccc 6576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 21316885 - 21316810
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||| ||||||||   ||| ||||||||||||| ||||| |||| ||||||||||| ||| | |||||||||||    
T  21316885 atgcatctggtaccaaccagggcatcaagcccccaacgtatagagcataaataggctcacagggcatcaagccctc 21316810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 21336875 - 21336800
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| ||||| |||| ||||||||||| ||| | ||||| |||||    
T  21336875 atgcatgtggtaccaaccagggcatcaagcccccaacgtatagagcataaataggctcacagggcatcaaaccctc 21336800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 22500763 - 22500837
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | ||| |||||||||||||  ||| | ||||||||||||||| ||| | |||||||||||    
T  22500763 atgcatgtggtaccaatcagggcatcaagcccccaatgta-taagcgtaaataggctcacagggcatcaagccctc 22500837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 22508697 - 22508771
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | ||| |||||||||||||  ||| | ||||||||||||||| ||| | |||||||||||    
T  22508697 atgcatgtggtaccaatcagggcatcaagcccccaatgta-taagcgtaaataggctcacagggcatcaagccctc 22508771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 26896190 - 26896265
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||| || |||||||||||||| ||||||| ||| | |||||| ||||    
T  26896190 atgcatgtggtaccaaccagggcatcaagccctcaacgtattgagcgtaactaggctcacagggcatcaagtcctc 26896265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 1384878 - 1384824
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaata 62  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| |||| ||||||    
T  1384878 atatgcatgtggtaccaatcagggcatcaagcccccaacgtatggagcataaata 1384824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 22413315 - 22413239
Alignment:
Q  160 atggactcaacttcttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||  |||||||| ||| ||||| ||| ||||| |  ||||||||||| ||||||||||||| |||||||    
T  22413315 atggactcaacaacttaacatcttaaaacattgacctctta-tataaatccaataatttggaacatcatctttcatct 22413239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 23969698 - 23969645
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||| | ||||| |||||    
T  23969698 catcaagccctcaacgtattgagcgtaaataggctcacagggcatcaaaccctc 23969645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 7672518 - 7672482
Alignment:
Q  94 cgtattatgtataaatatacattacagagcatcaagc 130  Q
    |||| |||||||||||||||||||||| |||||||||    
T  7672518 cgtaatatgtataaatatacattacagggcatcaagc 7672482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 79656 - 79429
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  79656 atgcatttggtaccatttgggacatcaagcccccatcttattgagcgtaaataggctctcagagcatcaagccctctaccatcgcgtattatgtataaat 79557  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttcttaatgcaaatc 209  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | ||||    
T  79556 atacattacagagcatcaagctctctaccatcatgtattatgcgtatgcaatggactcaacttcttaacattttataacatcgacttcttattactaatc 79457  T
Q  210 caataaattggaacatcatccttcatct 237  Q
    |||||||||||||||| |||||||||||    
T  79456 caataaattggaacattatccttcatct 79429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 47 - 237
Target Start/End: Complemental strand, 19801716 - 19801526
Alignment:
Q  47 gtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgta 146  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  19801716 gtattgagcgtaaataggctctcagagcatcaagccctctaccatcgcgtattatgtataaagatacaatacagagcatcaagctctctaccatctcgta 19801617  T
Q  147 ttatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  19801616 ttatgcgtatgcaatggactcaacttcttaacattttagaacatcgacttcttaacacaaatcaaataagttggaacatcatccttcatct 19801526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 39833604 - 39833769
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  39833604 atgcatgtggtaccaaccaggacatcaagccccaa-cgtattgagcgtaaataggctcacagagcatcaagccctctcccttctcatattatgtataaat 39833702  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||||||||||||||||||||  || ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  39833703 atacattacagagcatcaagccatcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 39833769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 38550494 - 38550328
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||| ||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  38550494 atgcatgtggtatcaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 38550395  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||  |||||||||||||||||| ||||||||    
T  38550394 atacattacagagcatcaagccctcaccca--acgta-aataagtatgcaatggactcaacatcttaaca 38550328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 20983128 - 20982962
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| |||||| |||||| | |||||||||||||||||||| ||||  ||||| ||||||||| || | ||||||||||||||    
T  20983128 atgcatgtggtaccaaccagggcatcaaacccccaacatattgagcgtaaataggctcacagaacatcaacccctctcccttcacatattatgtataaat 20983029  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||||||||||||||||||||| || ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  20983028 atacattacagagcatcaagctttcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 20982962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 27472791 - 27472625
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||  |||  ||||||||||||| | ||||||| |||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  27472791 atgcatgtggtaccaactagagcatcaagcccccaacatattgagtgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 27472692  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||| ||||||||||||||||| ||| ||||   ||||  ||| ||||||||| |||||||| ||||||||    
T  27472691 atatattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatagactcaacatcttaaca 27472625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 19801794 - 19801719
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  19801794 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagaacatcaagccctc 19801719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 13428523 - 13428427
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaa 128  Q
    ||||||||||||| | |||||||||||||||||||| ||||| |||||| ||| |||| || | |||||||||||||||||||||||||||||||||    
T  13428523 catcaagcccccaacatattgagcgtaaataggctcacagagcatcaagtcctttcccttcacatattatgtataaatatacattacagagcatcaa 13428427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 1323580 - 1323458
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccc--tctcccatcgcgtattatgtataa 107  Q
    |||||||||||||||   ||| ||||||||||||| | ||||||||||||||| |||| ||||  |||||||||  |||||| || | ||||||||||||    
T  1323580 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataagctcacagatcatcaagccctctctcccttcacatattatgtataa 1323481  T
Q  108 atatacattacagagcatcaagc 130  Q
    |||||||||||||||||||||||    
T  1323480 atatacattacagagcatcaagc 1323458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 24713101 - 24713176
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  24713101 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggtatcaagccctc 24713176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15203643 - 15203557
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  15203643 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 15203557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 45291108 - 45291022
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  45291108 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 45291022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 19127871 - 19127946
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||  |||||||||||||||||||||| ||  |||||||||||||    
T  19127871 atgcatgtggtaccaaccagggcatcaagcccccgacgtattgagcgtaaataggctcacatggtatcaagccctc 19127946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19896015 - 19896097
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagc 81  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | |||||||    
T  19896015 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaccgtatttgagcgtaaataggctcccagggcatcaagc 19896097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 26225652 - 26225575
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| || ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  26225652 atgcatgtggtaccaattcagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 26225575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 39937160 - 39937107
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  39937160 catcaagcccccaacgtattgagcgtaaataggctcgcagggcatcaagccctc 39937107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 18833208 - 18833283
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |   | ||||||||||||| | |||||||||||||||||||| ||| | |||||||||||    
T  18833208 atgcatgtggtaccaatccaggcatcaagcccccaacatattgagcgtaaataggctcccagggcatcaagccctc 18833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41597938 - 41598024
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||| ||||||||||| ||  | |||||||||||    
T  41597938 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcataaataggctcccatggcatcaagccctc 41598024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 20179666 - 20179614
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaata 62  Q
    ||||||||||||||| | ||| ||||||||||||| |||||||||| ||||||    
T  20179666 atgcatgtggtaccaatcagggcatcaagcccccaacgtattgagcataaata 20179614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 18760310 - 18760373
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagag 73  Q
    |||||||| ||||||   ||| |||||||||||||  ||||||||||||||||||||| |||||    
T  18760310 atgcatgtagtaccaaccagggcatcaagcccccaatgtattgagcgtaaataggctcacagag 18760373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 24713207 - 24713238
Alignment:
Q  99 tatgtataaatatacattacagagcatcaagc 130  Q
    ||||||||||||||||||||||||||||||||    
T  24713207 tatgtataaatatacattacagagcatcaagc 24713238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 19127936 - 19128027
Alignment:
Q  33 atcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagc 130  Q
    ||||||||| || ||||||||||||||||||| || ||| | |||||||||||        | || |||||||||||||||||||||| |||||||||    
T  19127936 atcaagccctcaacgtattgagcgtaaataggatcacagggcatcaagccctc------aacataatatgtataaatatacattacagggcatcaagc 19128027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 22473429 - 22473486
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| ||||  ||||||||||    
T  22473429 atatgcatgtggtaccaatcagggcatcaagcccccaacgtatagagc--aaataggctc 22473486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 12756978 - 12756816
Alignment:
Q  75 atcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttct 174  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12756978 atcaagccctctcccatcgcgtattatgtataaatatacaatacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttct 12756879  T
Q  175 taacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12756878 tagcattttagaacatcgacttcttaatacaaatccaataaattggaacatcatccttcatct 12756816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 6170605 - 6170439
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||||||||||| ||||| ||||||||||||||||||||||  |||| ||||||||||||||| || | ||||||||||||||    
T  6170605 atgcatgtggtaccaaccaggacatcaagtccccaacgtattgagcgtaaataggctcatagagcatcaagccctctcccttcacatattatgtataaat 6170506  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||||||| |||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  6170505 atacattatagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 6170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 9390199 - 9390033
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  9390199 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 9390100  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||  ||||||||    
T  9390099 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaatatcttaaca 9390033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 37728018 - 37727874
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagct 131  Q
    ||||||||||||| ||||||||||||||||||||||  |||| ||||| ||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  37728018 catcaagcccccaacgtattgagcgtaaataggctcaaagagcatcaaaccctctcccttcacatattatgtataaatatacattacagagcatcaagct 37727919  T
Q  132 ctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  37727918 ctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 37727874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 17232250 - 17232413
Alignment:
Q  13 catgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatata 112  Q
    ||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | |||||||||||||||||    
T  17232250 catgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaatata 17232349  T
Q  113 cattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||| |||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  17232350 cattacatagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 17232413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 45848123 - 45847960
Alignment:
Q  13 catgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatata 112  Q
    ||||||||||||   ||| | ||||||||||| | |||||||||||||||||||| ||||| |||||||||||  || || | |||||||||||||||||    
T  45848123 catgtggtaccaaccagggcgtcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctcaaccttcacatattatgtataaatata 45848024  T
Q  113 cattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||| | ||||||||    
T  45848023 cattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcagcatcttaaca 45847960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 14270535 - 14270435
Alignment:
Q  12 gcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatat 111  Q
    |||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||||    
T  14270535 gcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaatat 14270436  T
Q  112 a 112  Q
    |    
T  14270435 a 14270435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 1543530 - 1543467
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatat 111  Q
    ||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||    
T  1543530 tattgagcgtaaataggctcctagagcatcaagccctctcccatctcgtattatgtataaatat 1543467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 8468111 - 8468191
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctccca 90  Q
    |||||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||| ||||    
T  8468111 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctcaccca 8468191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 8852337 - 8852262
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  8852337 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 8852262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 11066306 - 11066380
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccct 84  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||||||||    
T  11066306 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccct 11066380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44116301 - 44116387
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | |||||||||||    
T  44116301 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 44116387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20110304 - 20110389
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccct 84  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | ||||||||||    
T  20110304 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccct 20110389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 18075656 - 18075582
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||  |||| ||||||||||| | |||||||||||||||||||||| ||| | |||||||||||    
T  18075656 atgcatgtggtaccaactagggcatcaagccccaa-cgtattgagcgtaaataggctcacagggcatcaagccctc 18075582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17062246 - 17062160
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||| ||||||||||||| ||| | |||||||||||    
T  17062246 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgatcgtaaataggctcccagggcatcaagccctc 17062160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29329290 - 29329204
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| |||||||||||||  ||||| |||||||||||||||| ||| | |||||||||||    
T  29329290 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaatgtatttgagcgtaaataggctcccagggcatcaagccctc 29329204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48273140 - 48273226
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||| |||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  48273140 acctcttatgtgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 48273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 38227286 - 38227339
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  38227286 catcaagcccccaacgtattgagcgtaaataggctcccagggcatcaagccctc 38227339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 46387211 - 46387097
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||  |||| ||||||||||||| | ||||||||||||||||| || ||| | ||||| |||||        | || |||||||||||    
T  46387211 atgcatgtggtaccaactagggcatcaagcccccaacatattgagcgtaaataggttcacagggcatcaaaccctc------aacataatatgtataaat 46387118  T
Q  110 atacattacagagcatcaagc 130  Q
    ||||||||||| |||||||||    
T  46387117 atacattacagggcatcaagc 46387097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 32300904 - 32300956
Alignment:
Q  33 atcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  32300904 atcaagcccccaacgtattgagcgtaaataggctcccagggcatcaagccctc 32300956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 13150750 - 13150675
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||  ||||||||| ||| |||||||||||||||||||||| ||| | |||||||||||    
T  13150750 atgcatgtggtaccaaccagagcatcaagcctccaacgtattgagcgtaaataggctcacagggcatcaagccctc 13150675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 20619123 - 20619198
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||  ||||||||||||| ||||||||||||||||||||||  || | |||||||||||    
T  20619123 atgcatgtggtaccaaccagagcatcaagcccccaacgtattgagcgtaaataggctcatagggcatcaagccctc 20619198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 48811717 - 48811792
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||| || |||||||||||||||||||||| ||| | ||||| |||||    
T  48811717 atgcatgtggtaccaaccagggcatcaagccctcaacgtattgagcgtaaataggctcacagggcatcaaaccctc 48811792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 20619182 - 20619240
Alignment:
Q  27 taggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||| |||||||||| || |||||||||||||||||||||| ||| | |||||||||||    
T  20619182 tagggcatcaagccctcaacgtattgagcgtaaataggctcacagggcatcaagccctc 20619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 12371204 - 12371257
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||| |||||||||| ||||||||||| ||| | |||||||||||    
T  12371204 catcaagcccccaacgtattgagcataaataggctcacagggcatcaagccctc 12371257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 12371246 - 12371299
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||| | |||||||||||    
T  12371246 catcaagccctcaacgtattgagcgtaaataggctcacagggcatcaagccctc 12371299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 14183797 - 14183721
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| | |||||||| ||||||| ||| ||| |||||||||||||    
T  14183797 atgcatgtggtaccaatccagggcatcaagcccccaacatattgagcataaatagactcacagggtatcaagccctc 14183721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15082293 - 15082225
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgt-attgagcgtaaataggctc 67  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || |||  ||||||||||||||||||    
T  15082293 acctcttatatgcatgtggtaccaatccaggacatcaagccctcaacgtgtttgagcgtaaataggctc 15082225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 18876022 - 18875946
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| |||||| |||||| |||||||| ||||||||||||| ||| | |||||||||||    
T  18876022 atgcatgtggtaccaatccagggcatcaaacccccaacgtattgaccgtaaataggctcacagggcatcaagccctc 18875946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 44373853 - 44373905
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaata 62  Q
    ||||||||||||||| | ||| ||||||||||||| |||||||||| ||||||    
T  44373853 atgcatgtggtaccaatcagggcatcaagcccccaacgtattgagcataaata 44373905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 44382718 - 44382770
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaata 62  Q
    ||||||||||||||| | ||| ||||||||||||| |||||||||| ||||||    
T  44382718 atgcatgtggtaccaatcagggcatcaagcccccaacgtattgagcataaata 44382770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 61591 - 61516
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||  ||||||||||||| ||||||||||||||||| ||||  || | |||||||||||    
T  61591 atgcatgtggtaccaaccagtgcatcaagcccccaacgtattgagcgtaaatatgctcatagggcatcaagccctc 61516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 12128311 - 12128237
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||||||  ||||||| ||||||||||||| ||| | |||||||||||    
T  12128311 atgcatgtggtaccaaccagggcatcaagcccccaatgtattga-cgtaaataggctcacagggcatcaagccctc 12128237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 13133635 - 13133564
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccc 83  Q
    ||||||||||||||| | ||| ||||||||||||| ||||| ||||  |||||||||| ||| | |||||||||    
T  13133635 atgcatgtggtaccaatcagggcatcaagcccccaacgtatagagc--aaataggctcacagggcatcaagccc 13133564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 8136228 - 8136156
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccc 83  Q
    ||||||||||||||| | ||| ||||||||||||| ||||| |||| | ||||||||| ||| | |||||||||    
T  8136228 atgcatgtggtaccaatcagggcatcaagcccccaacgtatagagcat-aataggctcacagggcatcaagccc 8136156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 13150686 - 13150633
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||  | |||||||||||    
T  13150686 catcaagccctcaacgtattgagcgtaaataggctcacatggcatcaagccctc 13150633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 18456733 - 18456652
Alignment:
Q  6 ttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||| |  ||| |||||||| |||| |||||| |||||||||||||||| ||| | |||||| ||||    
T  18456733 ttatatgcatgtggtaccaatccagggcatcaagctcccaacgtatttgagcgtaaataggctcccagggcatcaaggcctc 18456652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 32434803 - 32434746
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    |||||||||||||||   ||  ||||||||||||| ||||||||||||||||| ||||    
T  32434803 atgcatgtggtaccaaccagtgcatcaagcccccaacgtattgagcgtaaatatgctc 32434746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 36686350 - 36686297
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||| | ||||| |||||    
T  36686350 catcaagccctcaacgtattgagcgtaaataggctcacagggcatcaaaccctc 36686297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 1543508 - 1543476
Alignment:
Q  119 agagcatcaagctctctcccatctcgtattatg 151  Q
    |||||||||||| ||||||||||||||||||||    
T  1543508 agagcatcaagccctctcccatctcgtattatg 1543476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16402787 - 16402739
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgt 48  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||    
T  16402787 acctcttatatgcatgtggtaccaatacagggcatcaagcccccatcgt 16402739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 20585301 - 20585377
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| || ||| ||||||||||||| | |||||||| ||||||  ||| ||| | |||||||||||    
T  20585301 atgcatgtggtaccaattcagggcatcaagcccccaacatattgagcataaatacactcccagggcatcaagccctc 20585377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 20691 - 20523
Alignment:
Q  69 cagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactca 168  Q
    ||||| ||||| | |||| |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20691 cagagcatcaacctctctgccatcgtgtattatgtataaatatacattatagagcatcaagctctctaccatctcgtattatgcgtatgcaatggactca 20592  T
Q  169 acttcttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  20591 acttcttaacattttagaacatcgacttcttaatacaaatccaataagttggaacatcatccttcatct 20523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 20799 - 20658
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  20799 atgcatgtgataccatttaggacatcaagcccccatcgtattgagcgtaaataggctcttagagcatcaagccctctaccatcgcgtattatgtataaat 20700  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatg 151  Q
    ||||||||||||||||||| |||||| |||||  ||||||||    
T  20699 atacattacagagcatcaacctctctgccatcgtgtattatg 20658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 4516 - 4647
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4516 tattgagcgtaaataggctctcagagcattaagccctctcccatctcgtattatgtataaatatacattacagagcatcaagccctctcccatctcgtat 4615  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||| |||||||||||||||||| ||||||||    
T  4616 tatgagtatgcaatggactcaacatcttaaca 4647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 8800 - 8669
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||| | |||| |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  8800 tattgagcgtaaataggctcccagagcatcaagctctctcccatctcatattgtgtataaatatacattacagagcatcaagccctcccccatctcgtat 8701  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||| |||||||||||||||||| || |||||    
T  8700 tatgagtatgcaatggactcaacatcctaaca 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 52336 - 52250
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  52336 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 52250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 5889662 - 5889496
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||  || | ||||||||||||||    
T  5889662 atgcatgtggtaccaacaaggacatcaagcccccaacgtattgagcgtaaataggctcacagagcatcaagccctctcctttcacatattatgtataaat 5889563  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  5889562 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 5889496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 21742044 - 21741873
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   |||||||||||||| || |||||||||||||||||||||| ||||| ||||| ||||||||  || | ||||||||||||||    
T  21742044 atgcatgtggtaccaacaaggacatcaagccctcaacgtattgagcgtaaataggctcacagagcatcaaaccctctcctttcacatattatgtataaat 21741945  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaacatttta 184  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| |||||||| ||||    
T  21741944 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaacaattta 21741873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 29915519 - 29915436
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcg 93  Q
    |||||||||||||||  |||||||||||||||| | | |||||||||||||||||||| ||||| ||||||||||| |||||||    
T  29915519 atgcatgtggtaccaactaggacatcaagccccgaacttattgagcgtaaataggctcacagagcatcaagccctcgcccatcg 29915436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32027143 - 32027229
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| || |||| ||||||||||||| |||| |||||||||||||||||||||| | || ||||||||    
T  32027143 acctcttatatgcatgtggtaccaatctagggcatcaagcccccaacgtatttgagcgtaaataggctctcagggcattaagccctc 32027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14047871 - 14047957
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | |||||||||||    
T  14047871 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 14047957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20918359 - 20918273
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  20918359 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 20918273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11581613 - 11581527
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| | |||| |||||||||||||||| ||| | |||||||||||    
T  11581613 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacatatttgagcgtaaataggctcccagggcatcaagccctc 11581527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 24066940 - 24067026
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| | |||||||||||||||| ||| | |||||||||||    
T  24066940 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtagtagagcgtaaataggctcccagggcatcaagccctc 24067026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18319363 - 18319277
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||| |||||||||||||||||| |  ||| |||||||||||||  ||| | |||||||||||||||||||| | |||||||||||    
T  18319363 acctcctatatgcatgtggtaccaatccagggcatcaagcccccaatgtagtagagcgtaaataggctctcagggcatcaagccctc 18319277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22411937 - 22412022
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||| ||||| |||| |||||||||||||||||| ||| | |||||||||||    
T  22411937 acctcttatatgcatgtggtaccaatccagggcatcaag-ccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 22412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29329684 - 29329770
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||| |||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | ||||| |||||    
T  29329684 acctcttatatgcatgtgataccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaaaccctc 29329770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 13536526 - 13536469
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||| |||||||||||    
T  13536526 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcataaataggctc 13536469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 19920595 - 19920652
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    |||||||| ||||||   ||| ||||||||||||| ||||||||||||||||||||||    
T  19920595 atgcatgtagtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctc 19920652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 21309116 - 21309063
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||| |||||| |||||||||||||||||||||| ||| | |||||||||||    
T  21309116 catcaaacccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 21309063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 17874945 - 17875019
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | ||| ||||||||||| | |||| | ||||||||||||||| ||| | |||||||||||    
T  17874945 atgcatgtggtaccaatcagggcatcaagcccctaacgta-taagcgtaaataggctcacagggcatcaagccctc 17875019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23390846 - 23390800
Alignment:
Q  1 acctcttatatgcatgtggtaccatt-taggacatcaagcccccatc 46  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||    
T  23390846 acctcttatatgcatgtggtaccattacagggcatcaagcccccatc 23390800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 2155017 - 2154940
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| ||||||||||||| |||||| |||| ||||||||||| ||| | |||||||||||    
T  2155017 atgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcataaataggctcccagggcatcaagccctc 2154940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 8e-42; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 28194952 - 28194786
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  28194952 atgcatgtggtaccaacaaggacatcaagcccccaacgtattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 28194853  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||| ||||    
T  28194852 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatctaaaca 28194786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 43542736 - 43542902
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||| || | ||||||||||||||    
T  43542736 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaatagggtcacagagcatcaagccctctcccttcacatattatgtataaat 43542835  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||||||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  43542836 atacattacagagcatcaagctctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 43542902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 20636523 - 20636688
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||| || | ||||||| ||||||    
T  20636523 atgcatgtggtaccaacaaggacatcaagcccccaacgtattgagcataaataggctcacagagcatcaagccctctcccttcacatattatggataaat 20636622  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaac 178  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| |||||||    
T  20636623 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaac 20636688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 35982182 - 35982016
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  35982182 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 35982083  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    | ||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  35982082 aaacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 35982016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 41306068 - 41305924
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagct 131  Q
    ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | |||||||||||||||||||||||||||||||||||     
T  41306068 catcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaatatacattacagagcatcaagcc 41305969  T
Q  132 ctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  41305968 ctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 41305924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 46383058 - 46382940
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | |||||| ||||||||||||| ||||| ||||| ||||||||| || | ||||||||||||||    
T  46383058 atgcatgtggtaccaaccagggcatcaagcccccaacatattgaacgtaaataggctcacagagcatcaaaccctctcccttcacatattatgtataaat 46382959  T
Q  110 atacattacagagcatcaa 128  Q
    |||||||||||||||||||    
T  46382958 atacattacagagcatcaa 46382940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 43697015 - 43697110
Alignment:
Q  33 atcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaa 128  Q
    |||||||||||| |||||||||||||||||| |||  |||| ||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  43697015 atcaagcccccaacgtattgagcgtaaatagactcatagagcatcaagccctctcccttcacatattatgtataaatatacattacagagcatcaa 43697110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 431509 - 431594
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||||||||||| |  ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  431509 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtattgagcgtaaataggctcccagggcatcaagccctc 431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 41227865 - 41227790
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||| ||  | |||||||||||    
T  41227865 atgcatgtggtaccaactagggcatcaagcccccaacgtattgagcgtaaataggctcacatggcatcaagccctc 41227790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40388943 - 40389029
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||| |||| | |||||||||||||||| ||| | |||||||||||    
T  40388943 acctcttatatgcatgtggtaccaatccaggacatcaagcccccaacgtagtagagcgtaaataggctcccagggcatcaagccctc 40389029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 35088355 - 35088430
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| | ||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  35088355 atgcatgtggtaccaaccagggcgtcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 35088430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 20587610 - 20587684
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccct 84  Q
    |||||||||||||||   ||| |||||||||| || |||||||||||||||||||||| ||| | ||||||||||    
T  20587610 atgcatgtggtaccaaccagggcatcaagccctcaacgtattgagcgtaaataggctcacagggcatcaagccct 20587684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 20592148 - 20592222
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccct 84  Q
    |||||||||||||||   ||| |||||||||| || |||||||||||||||||||||| ||| | ||||||||||    
T  20592148 atgcatgtggtaccaaccagggcatcaagccctcaacgtattgagcgtaaataggctcacagggcatcaagccct 20592222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29297887 - 29297973
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||  ||| |||||||||||||||||| ||| | |||||||||||    
T  29297887 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaatgtatttgagcgtaaataggctcacagggcatcaagccctc 29297973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 48300743 - 48300800
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    |||||||||||||||   ||| ||||||||||||| ||||||||||||||||||||||    
T  48300743 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctc 48300800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 20634746 - 20634671
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||| ||||||||| |||||||||||||||||||||| |||   |||||||||||    
T  20634746 atgcatgtggtaccaaccagggcataaagcccccaacgtattgagcgtaaataggctcacaggacatcaagccctc 20634671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 16368463 - 16368387
Alignment:
Q  160 atggactcaacttcttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||  |||| ||| ||||||||||||| ||||| |  ||||||||||| ||||||||||||| |||||||    
T  16368463 atggactcaacaacttagcatcttagaacatcgacctctta-tataaatccaataatttggaacatcatcattcatct 16368387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 50686555 - 50686631
Alignment:
Q  160 atggactcaacttcttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||  |||||||| ||||||||||||| |||| ||  ||||||||||| |||||||| |||| |||||||    
T  50686555 atggactcaacaacttaacatcttagaacatcgacctctt-atataaatccaataatttggaacaacatctttcatct 50686631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 20316187 - 20316263
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| |||||| |||||| |||||||||||||||||||||| ||  | |||||||||||    
T  20316187 atgcatgtggtaccaatccagggcatcaaacccccaacgtattgagcgtaaataggctcccaaggcatcaagccctc 20316263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 23967528 - 23967604
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| |  ||| |||||||| ||||  ||||||||||||||||||||| ||| | |||||||||||    
T  23967528 atgcatgtggtaccaatacagggcatcaagctcccaaggtattgagcgtaaataggctcccagggcatcaagccctc 23967604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 13528930 - 13528855
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| ||||   ||| ||||||||||||| ||||||||||||||||||  || ||| | |||||||||||    
T  13528930 atgcatgtggcaccaaccagggcatcaagcccccaacgtattgagcgtaaatagaatcacagggcatcaagccctc 13528855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 14238673 - 14238599
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | ||| |||||||||| || |||||  || |||||||||||| ||||| |||||||||||    
T  14238673 atgcatgtggtaccaatcagggcatcaagccctcaacgtata-agtgtaaataggctcacagagcatcaagccctc 14238599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 35088503 - 35088534
Alignment:
Q  99 tatgtataaatatacattacagagcatcaagc 130  Q
    ||||||||||||||||||||||||||||||||    
T  35088503 tatgtataaatatacattacagagcatcaagc 35088534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 44891534 - 44891609
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| ||||  |||||||||| ||| | ||||| |||||    
T  44891534 atatgcatgtggtaccaatcagggcatcaagcccccaacgtatagagc--aaataggctcacagggcatcaaaccctc 44891609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 16059501 - 16059425
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| || ||| ||||||||||||| | ||||||||  |||||  ||||||| | |||||||||||    
T  16059501 atgcatgtggtaccaattcagggcatcaagcccccaacatattgagcaaaaatacactctcagggcatcaagccctc 16059425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 24720972 - 24720915
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| ||||  ||||||||||    
T  24720972 atatgcatgtggtaccaatcagggcatcaagcccccaacgtatagagc--aaataggctc 24720915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 27161873 - 27161789
Alignment:
Q  3 ctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||| ||  ||| ||||||||||||| | || || ||||||||||||||| ||| | ||||| |||||    
T  27161873 ctcttatatgcatgtggtaccaatccagggcatcaagcccccaacatatttcagcgtaaataggctcccagggcatcaaaccctc 27161789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 41050169 - 41050137
Alignment:
Q  205 aaatccaataaattggaacatcatccttcatct 237  Q
    ||||||||||| |||||||||||||||||||||    
T  41050169 aaatccaataatttggaacatcatccttcatct 41050137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 9701 - 9803
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  9701 tattgagcgtaaataggctctcagagcatcaagccctctcccatctcgtattatgtataaatattcattacagagcatcaagccctctcccatcacgtat 9800  T
Q  148 tat 150  Q
    |||    
T  9801 tat 9803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 9722 - 9755
Alignment:
Q  118 cagagcatcaagctctctcccatctcgtattatg 151  Q
    ||||||||||||| ||||||||||||||||||||    
T  9722 cagagcatcaagccctctcccatctcgtattatg 9755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 44287 - 44121
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  44287 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagagcatcaagccctctcccttcacatattatgtataaat 44188  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  44187 atacattacagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 44121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 2663 - 2792
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| || | ||||||||||||||    
T  2663 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgcaaataggctcacagagtatcaagccctctcccttcacatattatgtataaat 2762  T
Q  110 atacattacagagcatcaagctctctccca 139  Q
    ||||||||||||||||||||| ||| ||||    
T  2763 atacattacagagcatcaagccctcaccca 2792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 13180 - 13311
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |  ||| |||||||||||||||||||||||||||||| ||| |||||||| |||    
T  13180 tattgagcgtaaataggctcccagagcatcaagccctctcccatctcagattgtgtataaatatacattacagagcatcaagccctcccccatctcatat 13279  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||  ||||||||||||||||| || |||||    
T  13280 tatgaatatgcaatggactcaacatcctaaca 13311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 24882 - 25012
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |  ||| ||||| ||||||||||||||||||||||||  || ||||||||  ||    
T  24882 tattgagcgtaaataggctcccagagcatcaagccctctcccatctcagattgtgtat-aatatacattacagagcatcaagccgtcccccatctcagat 24980  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||  | ||||||||||||||| || |||||    
T  24981 tatgaatgtgcaatggactcaacatcctaaca 25012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 34767 - 34898
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||| |  ||| |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  34767 tattgagcataaataggctcccagagcatcaagccctctcccatctcagattgtgtataaatatacattacagagcatcaagccctcccccatctcgtat 34866  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||  ||||||||||||||||| || |||||    
T  34867 tatgaatatgcaatggactcaacatcctaaca 34898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 14 - 179
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| |||||||||| || | ||||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||    
T  14 atgcatgtggtaccaaccagggcatcaagccctcaacatattgagcgtaaataggctccaagagcatcaagccctctcccttcgcgtattatgtataaat 113  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||||||||||||| |||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  114 atacattacagagcgtcaagc-ctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 23886 - 23721
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| |||||||||| || | ||||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||    
T  23886 atgcatgtggtaccaaccagggcatcaagccctcaacatattgagcgtaaataggctccaagagcatcaagccctctcccttcgcgtattatgtataaat 23787  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||||||||||||| |||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  23786 atacattacagagcgtcaagc-ctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 23721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 20952 - 20790
Alignment:
Q  14 atgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatac 113  Q
    |||||||||||   ||| |||||||||| || | ||||||||||||||||||||  |||| ||||||||||||||| | |||||||||||||||||||||    
T  20952 atgtggtaccaaccagggcatcaagccctcaacatattgagcgtaaataggctccaagagcatcaagccctctccctttgcgtattatgtataaatatac 20853  T
Q  114 attacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    |||| |||||||||||| ||| ||||   ||||  ||| |||||||||||||||||| ||||||||    
T  20852 attatagagcatcaagccctcaccca--acgta-aatgagtatgcaatggactcaacatcttaaca 20790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 106183 - 106349
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaat 109  Q
    |||||||||||||||   ||| ||||||||||||| | ||||||||||||||||||||  |||| ||||||| ||||||| || | ||||||||||||||    
T  106183 atgcatgtggtaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcatagagcatcaagctctctcccttcacatattatgtataaat 106282  T
Q  110 atacattacagagcatcaagctctctcccatctcgtattatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||||||||||||||||| ||||| ||  |  ||||  ||| |||||||||||||||||| ||||||||    
T  106283 atacattacagagcatcaaactctcacc--taacgta-aatgagtatgcaatggactcaacatcttaaca 106349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 74469 - 74600
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctcccatctcgtat 147  Q
    |||||||| ||||||| ||| ||||  |||||||||||||||||| |  ||| |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  74469 tattgagcataaatagactcccagaacatcaagccctctcccatctcagattgtgtataaatatacattacagagcatcaaaccctcccccatctcgtat 74568  T
Q  148 tatgcgtatgcaatggactcaacttcttaaca 179  Q
    ||||  ||||||||||||||||| || |||||    
T  74569 tatgaatatgcaatggactcaacatcctaaca 74600  T

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Target: scaffold0045 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 47140 - 47049
Alignment:
Q  48 tattgagcgtaaataggctctcagagtatcaagccctctcccatcgcgtattatgtataaatatacattacagagcatcaagctctctccca 139  Q
    |||||||||||||||||||| ||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||    
T  47140 tattgagcgtaaataggctcacagaacatcaagccctctcccatcacatattatgtataaatatacattacagagcatcaagccctcaccca 47049  T

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Target: scaffold0036 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 78524 - 78449
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  78524 atgcatgtggtaccaatcagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 78449  T

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Target: scaffold0375 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 9516 - 9441
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||  ||| | |||||||||||    
T  9516 atgcatgtggtaccaactagggcatcaagcccccaacgtattgagcgtaaataggcttacagggcatcaagccctc 9441  T

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Target: scaffold0375; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 9452 - 9399
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||||||||||||||||||| ||| | |||||||||||    
T  9452 catcaagccctcaacgtattgagcgtaaataggctcacagggcatcaagccctc 9399  T

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Target: scaffold0064 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 57680 - 57755
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  57680 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 57755  T

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Target: scaffold0047 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 77966 - 78041
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||| |||||| | ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||    
T  77966 atgcatgtagtaccaatcagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccctc 78041  T

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Target: scaffold0737 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 6860 - 6786
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccct 84  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||||||||    
T  6860 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagccct 6786  T

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Target: scaffold0737; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 6754 - 6701
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || ||||||||||||||||||| || ||| | |||||||||||    
T  6754 catcaagccctcaacgtattgagcgtaaataggttcacagggcatcaagccctc 6701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 1931 - 1899
Alignment:
Q  205 aaatccaataaattggaacatcatccttcatct 237  Q
    ||||||||||| |||||||||||||||||||||    
T  1931 aaatccaataatttggaacatcatccttcatct 1899  T

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Target: scaffold0507 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 3096 - 3025
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagc 81  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||    
T  3096 atgcatgtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaagc 3025  T

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Target: scaffold0142 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16527 - 16610
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagcc 82  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| |||||||||||||||||| ||| | ||||||||    
T  16527 acctcttatatgcatgtggtacctatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagcc 16610  T

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Target: scaffold0111 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 7194 - 7269
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||| || |||||||||||||||||||||| ||| | |||||||||||    
T  7194 atgcatgtggtaccaaccagggcatcaagcccacaacgtattgagcgtaaataggctcacagggcatcaagccctc 7269  T

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Target: scaffold0111; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 14313 - 14388
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||| || |||||||||||||||||||||| ||| | |||||||||||    
T  14313 atgcatgtggtaccaaccagggcatcaagcccacaacgtattgagcgtaaataggctcacagggcatcaagccctc 14388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 14400 - 14453
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| || |||||| ||||||||||||||| ||| | |||||||||||    
T  14400 catcaagccctcaacgtattaagcgtaaataggctcacagggcatcaagccctc 14453  T

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Target: scaffold0697 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6352 - 6438
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| || ||||||||||||||| ||| | |||||||||||    
T  6352 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttcagcgtaaataggctcccagggcatcaagccctc 6438  T

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Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1610 - 1524
Alignment:
Q  1 acctcttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||| |||||||||||||||||| || ||| ||||||||||||| |||| | |||||||||||||||| ||| | |||||||||||    
T  1610 acctcctatatgcatgtggtaccaattcagggcatcaagcccccaacgtagtagagcgtaaataggctcccagggcatcaagccctc 1524  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44204 - 44290
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| || |||| ||||||||||||| |||| ||||| |||||||||||| ||| | |||||| ||||    
T  44204 acctcttatatgcatgtggtaccaatctagggcatcaagcccccaacgtatttgagtgtaaataggctcccagggcatcaaggcctc 44290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 41363 - 41286
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||| ||||   ||| ||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||    
T  41363 atatgcatgtggcaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctcacagggcatcaaaccctc 41286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 15559 - 15478
Alignment:
Q  6 ttatatgcatgtggtaccattt-aggacatcaagcccccatcgtatt-gagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||| |  ||| ||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  15559 ttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctcccagggcatcaagccctc 15478  T

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Target: scaffold0853 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 3012 - 2936
Alignment:
Q  10 atgcatgtggtaccattta-ggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||| | | || ||||||||||||| ||||||||||||||||||||||  || | |||||||||||    
T  3012 atgcatgtggtaccaatcaagggcatcaagcccccaacgtattgagcgtaaataggctcatagggcatcaagccctc 2936  T

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Target: scaffold0394 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11813 - 11881
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgta-ttgagcgtaaataggctc 67  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||| |||| ||||||||||||||||||    
T  11813 acctcttatatgcatgtggtaccaatccagggcatcaagcccccaacgtatttgagcgtaaataggctc 11881  T

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Target: scaffold1633 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 134 - 209
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||| || |||||||||||||||||||||| ||| | ||||| |||||    
T  134 atgcatgtggtaccaaccagggcatcaagccctcaacgtattgagcgtaaataggctcacagggcatcaaaccctc 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 13563 - 13638
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   |||  |||||||||||| ||||||||||||||| |||||| ||| | |||||||||||    
T  13563 atgcatgtggtaccaaccagggaatcaagcccccaacgtattgagcgtaaaaaggctcacagggcatcaagccctc 13638  T

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Target: scaffold0371 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 2763 - 2838
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||| ||||   ||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||||||    
T  2763 atgcatgtggaaccaaccagggcatcaagcccccaacatattgagcgtaaataggctcacagggcatcaagccctc 2838  T

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Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 19591 - 19516
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||||||||||||   ||| |||||||||| || | |||||||||||||||||||| ||| | |||||||||||    
T  19591 atgcatgtggtaccaaccagggcatcaagccctcaacatattgagcgtaaataggctcacagggcatcaagccctc 19516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30087 - 30173
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgt-attgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||||||||| ||  ||| |||||||||| || |||  |||||||||||||||||| ||| | |||||||||||    
T  30087 acctcttatatgcatgtggtaccaatccagggcatcaagccctcaacgtgtttgagcgtaaataggctcccagggcatcaagccctc 30173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 9972 - 9915
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    ||||| |||||||||   ||| ||||||||||||| ||||||||||||||||||||||    
T  9972 atgcaagtggtaccaaccagggcatcaagcccccaacgtattgagcgtaaataggctc 9915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 751 - 698
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||| |||||||||| ||||||||||| ||| | |||||||||||    
T  751 catcaagcccccaacgtattgagcataaataggctcacagggcatcaagccctc 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25710 - 25758
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgt 48  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  25710 acctcttatatgcatgtggtaccaatctagggcatcaagcccccatcgt 25758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 60880 - 60817
Alignment:
Q  173 cttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||| ||||||||||||| ||||| |  ||||||||||| ||||||||||||| |||||||    
T  60880 cttaacatcttagaacatcgacctctta-tataaatccaataatttggaacatcatctttcatct 60817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 1402 - 1433
Alignment:
Q  99 tatgtataaatatacattacagagcatcaagc 130  Q
    ||||||||||||||||||||||||||||||||    
T  1402 tatgtataaatatacattacagagcatcaagc 1433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8250 - 8297
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg 47  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||    
T  8250 acctcttatatgcatgtggtaccaatatagggcatcaagcccccatcg 8297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10086 - 10133
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg 47  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||    
T  10086 acctcttatatgcatgtggtaccaatatagggcatcaagcccccatcg 10133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10069 - 10116
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg 47  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||    
T  10069 acctcttatatgcatgtggtaccaatctagggcatcaagcccccatcg 10116  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 76737 - 76768
Alignment:
Q  99 tatgtataaatatacattacagagcatcaagc 130  Q
    ||||||||||||||||||||||||||||||||    
T  76737 tatgtataaatatacattacagagcatcaagc 76768  T

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Target: scaffold0601 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 8015 - 7957
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    ||||||||||||||| |  ||| ||||||||||||| | ||||||||||||||||||||    
T  8015 atgcatgtggtaccaatccagggcatcaagcccccaacatattgagcgtaaataggctc 7957  T

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Target: scaffold0574 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8164 - 8119
Alignment:
Q  1 acctcttatatgcatgtggtaccatttaggacatcaagcccccatcg 47  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||    
T  8164 acctcttatatgcatgtggtaccatttagggcat-gagcccccatcg 8119  T

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Target: scaffold0486 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 8282 - 8340
Alignment:
Q  10 atgcatgtggtaccattt-aggacatcaagcccccatcgtattgagcgtaaataggctc 67  Q
    ||||||||||||||| |  ||| ||||||||||||| ||||||||||||||||| ||||    
T  8282 atgcatgtggtaccaatccagggcatcaagcccccaacgtattgagcgtaaataagctc 8340  T

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Target: scaffold0134 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 10292 - 10258
Alignment:
Q  99 tatgtataaatatacattacagagcatcaagctct 133  Q
    |||||||||||||||||||||| ||||||||||||    
T  10292 tatgtataaatatacattacagggcatcaagctct 10258  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 19094 - 19169
Alignment:
Q  8 atatgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| ||||  |||||||||| ||| | ||||| |||||    
T  19094 atatgcatgtggtaccaatcagggcatcaagcccccaacgtatagagc--aaataggctcacagggcatcaaaccctc 19169  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1622 - 1668
Alignment:
Q  1 acctcttatatgcatgtggtaccatt-taggacatcaagcccccatc 46  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||    
T  1622 acctcttatatgcatgtggtaccattacagggcatcaagcccccatc 1668  T

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Target: scaffold1403 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 494 - 570
Alignment:
Q  160 atggactcaacttcttaacattttagaacatcgacttcttaatgcaaatccaataaattggaacatcatccttcatct 237  Q
    |||||||||||  |||| ||| ||||||||||||| |||| ||  ||||||||||| ||||||||||||  |||||||    
T  494 atggactcaacaacttagcatcttagaacatcgacctctt-atataaatccaataatttggaacatcataattcatct 570  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1358 - 1310
Alignment:
Q  1 acctcttatatgcatgtggtaccattt--aggacatcaagcccccatcg 47  Q
    |||||||||||||||||||||||| ||  ||| ||||||||||||||||    
T  1358 acctcttatatgcatgtggtaccaattccagggcatcaagcccccatcg 1310  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 59703 - 59650
Alignment:
Q  32 catcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccctc 85  Q
    |||||| |||||| |||||||||||||||||||||| ||| | || ||||||||    
T  59703 catcaaacccccaacgtattgagcgtaaataggctcacagggcataaagccctc 59650  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 39806 - 39879
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaataggctctcagagtatcaagccc 83  Q
    ||||||||||||||| | ||| ||||||||||||| ||||| |||| ||||||  ||| ||| | |||||||||    
T  39806 atgcatgtggtaccaatcagggcatcaagcccccaacgtatagagcataaatatactcacagggcatcaagccc 39879  T

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Target: scaffold0490 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1719 - 1767
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcgt 48  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||    
T  1719 acctcttatatgcatgtggtaccaatacagggcatcaagcccccatcgt 1767  T

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Target: scaffold0395 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5182 - 5126
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg-tattgagc 55  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||| ||||||||    
T  5182 acctcttatatgcatgtggtaccaatacagggcatcaagcccccatcgctattgagc 5126  T

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Target: scaffold0228 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21859 - 21915
Alignment:
Q  1 acctcttatatgcatgtggtacc-atttaggacatcaagcccccatcg-tattgagc 55  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||| ||||||||    
T  21859 acctcttatatgcatgtggtaccaatccagggcatcaagcccccatcgctattgagc 21915  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 25954 - 25902
Alignment:
Q  10 atgcatgtggtaccatttaggacatcaagcccccatcgtattgagcgtaaata 62  Q
    ||||||||||||||| | ||| ||||||||||||| | |||||||| ||||||    
T  25954 atgcatgtggtaccaatcagggcatcaagcccccaacatattgagcataaata 25902  T

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